get_metrics.ipynb

{"nbformat":4,"nbformat_minor":0,"metadata":{"colab":{"provenance":[],"authorship_tag":"ABX9TyONW1o5DrGEgajP3BMKjUjR"},"kernelspec":{"name":"python3","display_name":"Python 3"},"language_info":{"name":"python"}},"cells":[{"cell_type":"code","execution_count":1,"metadata":{"id":"KsvqfSTRvgMP","executionInfo":{"status":"ok","timestamp":1675875320483,"user_tz":-330,"elapsed":6,"user":{"displayName":"Inter IIT","userId":"08418003247324276874"}}},"outputs":[],"source":["import os"]},{"cell_type":"code","source":["!pip install image-similarity-measures"],"metadata":{"colab":{"base_uri":"https://localhost:8080/"},"id":"1xdElAQA870O","executionInfo":{"status":"ok","timestamp":1675875337861,"user_tz":-330,"elapsed":17383,"user":{"displayName":"Inter IIT","userId":"08418003247324276874"}},"outputId":"6ef846f5-7c69-4aad-e115-04f2bbabfd66"},"execution_count":2,"outputs":[{"output_type":"stream","name":"stdout","text":["Looking in indexes: https://pypi.org/simple, https://us-python.pkg.dev/colab-wheels/public/simple/\n","Collecting image-similarity-measures\n","  Downloading image_similarity_measures-0.3.5-py3-none-any.whl (9.1 kB)\n","Requirement already satisfied: scikit-image in /usr/local/lib/python3.8/dist-packages (from image-similarity-measures) (0.18.3)\n","Collecting rasterio\n","  Downloading rasterio-1.3.5.post1-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (20.1 MB)\n","\u001b[2K     \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m20.1/20.1 MB\u001b[0m \u001b[31m40.1 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n","\u001b[?25hRequirement already satisfied: numpy in /usr/local/lib/python3.8/dist-packages (from image-similarity-measures) (1.21.6)\n","Collecting pyfftw\n","  Downloading pyFFTW-0.13.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (1.8 MB)\n","\u001b[2K     \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m1.8/1.8 MB\u001b[0m \u001b[31m30.4 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n","\u001b[?25hCollecting phasepack\n","  Downloading phasepack-1.5.tar.gz (15 kB)\n","  Preparing metadata (setup.py) ... \u001b[?25l\u001b[?25hdone\n","Requirement already satisfied: opencv-python in /usr/local/lib/python3.8/dist-packages (from image-similarity-measures) (4.6.0.66)\n","Collecting cligj>=0.5\n","  Downloading cligj-0.7.2-py3-none-any.whl (7.1 kB)\n","Requirement already satisfied: attrs in /usr/local/lib/python3.8/dist-packages (from rasterio->image-similarity-measures) (22.2.0)\n","Collecting click-plugins\n","  Downloading click_plugins-1.1.1-py2.py3-none-any.whl (7.5 kB)\n","Requirement already satisfied: certifi in /usr/local/lib/python3.8/dist-packages (from rasterio->image-similarity-measures) (2022.12.7)\n","Requirement already satisfied: setuptools in /usr/local/lib/python3.8/dist-packages (from rasterio->image-similarity-measures) (57.4.0)\n","Collecting snuggs>=1.4.1\n","  Downloading snuggs-1.4.7-py3-none-any.whl (5.4 kB)\n","Requirement already satisfied: click>=4.0 in /usr/local/lib/python3.8/dist-packages (from rasterio->image-similarity-measures) (7.1.2)\n","Collecting affine\n","  Downloading affine-2.4.0-py3-none-any.whl (15 kB)\n","Requirement already satisfied: pillow!=7.1.0,!=7.1.1,>=4.3.0 in /usr/local/lib/python3.8/dist-packages (from scikit-image->image-similarity-measures) (7.1.2)\n","Requirement already satisfied: tifffile>=2019.7.26 in /usr/local/lib/python3.8/dist-packages (from scikit-image->image-similarity-measures) (2023.1.23.1)\n","Requirement already satisfied: imageio>=2.3.0 in /usr/local/lib/python3.8/dist-packages (from scikit-image->image-similarity-measures) (2.9.0)\n","Requirement already satisfied: networkx>=2.0 in /usr/local/lib/python3.8/dist-packages (from scikit-image->image-similarity-measures) (3.0)\n","Requirement already satisfied: PyWavelets>=1.1.1 in /usr/local/lib/python3.8/dist-packages (from scikit-image->image-similarity-measures) (1.4.1)\n","Requirement already satisfied: scipy>=1.0.1 in /usr/local/lib/python3.8/dist-packages (from scikit-image->image-similarity-measures) (1.7.3)\n","Requirement already satisfied: matplotlib!=3.0.0,>=2.0.0 in /usr/local/lib/python3.8/dist-packages (from scikit-image->image-similarity-measures) (3.2.2)\n","Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /usr/local/lib/python3.8/dist-packages (from matplotlib!=3.0.0,>=2.0.0->scikit-image->image-similarity-measures) (3.0.9)\n","Requirement already satisfied: cycler>=0.10 in /usr/local/lib/python3.8/dist-packages (from matplotlib!=3.0.0,>=2.0.0->scikit-image->image-similarity-measures) (0.11.0)\n","Requirement already satisfied: python-dateutil>=2.1 in /usr/local/lib/python3.8/dist-packages (from matplotlib!=3.0.0,>=2.0.0->scikit-image->image-similarity-measures) (2.8.2)\n","Requirement already satisfied: kiwisolver>=1.0.1 in /usr/local/lib/python3.8/dist-packages (from matplotlib!=3.0.0,>=2.0.0->scikit-image->image-similarity-measures) (1.4.4)\n","Requirement already satisfied: six>=1.5 in /usr/local/lib/python3.8/dist-packages (from python-dateutil>=2.1->matplotlib!=3.0.0,>=2.0.0->scikit-image->image-similarity-measures) (1.15.0)\n","Building wheels for collected packages: phasepack\n","  Building wheel for phasepack (setup.py) ... \u001b[?25l\u001b[?25hdone\n","  Created wheel for phasepack: filename=phasepack-1.5-py3-none-any.whl size=26984 sha256=1177dea4e5dffddf22dcc18d6aff9d57647e1fb78c2e6abe15c33626c20b2e86\n","  Stored in directory: /root/.cache/pip/wheels/c4/c9/8e/6e2318b9f30069caedee0ed0f2e9ac6ba1f3835bd4e779bbe8\n","Successfully built phasepack\n","Installing collected packages: phasepack, snuggs, pyfftw, cligj, click-plugins, affine, rasterio, image-similarity-measures\n","Successfully installed affine-2.4.0 click-plugins-1.1.1 cligj-0.7.2 image-similarity-measures-0.3.5 phasepack-1.5 pyfftw-0.13.1 rasterio-1.3.5.post1 snuggs-1.4.7\n"]}]},{"cell_type":"code","source":["from google.colab import drive\n","drive.mount('/content/drive')"],"metadata":{"colab":{"base_uri":"https://localhost:8080/"},"id":"6EuPcMbmv5K6","executionInfo":{"status":"ok","timestamp":1675875381156,"user_tz":-330,"elapsed":26155,"user":{"displayName":"Inter IIT","userId":"08418003247324276874"}},"outputId":"935c3e8a-00ed-4153-d311-8da15a6d097e"},"execution_count":4,"outputs":[{"output_type":"stream","name":"stdout","text":["Mounted at /content/drive\n"]}]},{"cell_type":"code","source":["path='/content/drive/MyDrive/ISRO/'"],"metadata":{"id":"4lsuxfqlv8Ah","executionInfo":{"status":"ok","timestamp":1675875735398,"user_tz":-330,"elapsed":420,"user":{"displayName":"Inter IIT","userId":"08418003247324276874"}}},"execution_count":13,"outputs":[]},{"cell_type":"code","source":["from image_similarity_measures.evaluate import evaluation\n","import numpy as np\n","fsim=[]\n","issm=[]\n","ssim=[]\n","psnr=[]\n","k=0\n","for x in os.listdir(\"/content/drive/MyDrive/ISRO/val_pred_ohrc\"):\n","  try:\n","    # print(x)\n","    eval_=evaluation(org_img_path=path+\"high_res/\"+x, pred_img_path=path+'val_pred_ohrc/'+x, metrics=[\"fsim\", \"psnr\",\"ssim\"])\n","\n","    \n","  except:\n","    continue\n","  if eval_ is not None:\n","    fsim.append(eval_['fsim'])\n","    issm.append(eval_['issm'])\n","    ssim.append(eval_['ssim'])\n","    psnr.append(eval_['psnr'])\n","  \n","  k+=1\n","  print(k)\n","print(\"Average PSNR is {}\".format(np.average(psnr)))\n","print(\"Average ISSM is {}\".format(np.average(issm)))\n","print(\"Average FSIM is {}\".format(np.average(fsim)))\n","print(\"Average SSIM is {}\".format(np.average(ssim)))"],"metadata":{"colab":{"base_uri":"https://localhost:8080/"},"id":"SMjILOvHwFnS","executionInfo":{"status":"ok","timestamp":1675876566128,"user_tz":-330,"elapsed":826664,"user":{"displayName":"Inter IIT","userId":"08418003247324276874"}},"outputId":"41a2e411-12fe-45e0-e24c-b097f0ae4929"},"execution_count":14,"outputs":[{"output_type":"stream","name":"stdout","text":["/content/drive/MyDrive/ISRO/high_res/178895.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/178895.png\n","/content/drive/MyDrive/ISRO/high_res/470609.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/470609.png\n","/content/drive/MyDrive/ISRO/high_res/60831.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/60831.png\n","/content/drive/MyDrive/ISRO/high_res/201959.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/201959.png\n","/content/drive/MyDrive/ISRO/high_res/132564.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/132564.png\n","/content/drive/MyDrive/ISRO/high_res/147494.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/147494.png\n","/content/drive/MyDrive/ISRO/high_res/482722.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/482722.png\n","/content/drive/MyDrive/ISRO/high_res/248286.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/248286.png\n","/content/drive/MyDrive/ISRO/high_res/320808.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/320808.png\n","/content/drive/MyDrive/ISRO/high_res/360738.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/360738.png\n","/content/drive/MyDrive/ISRO/high_res/400439.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/400439.png\n","/content/drive/MyDrive/ISRO/high_res/452604.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/452604.png\n","/content/drive/MyDrive/ISRO/high_res/407310.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/407310.png\n","/content/drive/MyDrive/ISRO/high_res/378837.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/378837.png\n","/content/drive/MyDrive/ISRO/high_res/390130.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/390130.png\n","/content/drive/MyDrive/ISRO/high_res/108644.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/108644.png\n","/content/drive/MyDrive/ISRO/high_res/343506.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/343506.png\n","/content/drive/MyDrive/ISRO/high_res/201044.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/201044.png\n","/content/drive/MyDrive/ISRO/high_res/320790.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/320790.png\n","/content/drive/MyDrive/ISRO/high_res/169889.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/169889.png\n","/content/drive/MyDrive/ISRO/high_res/332842.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/332842.png\n","/content/drive/MyDrive/ISRO/high_res/268919.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/268919.png\n","/content/drive/MyDrive/ISRO/high_res/374428.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/374428.png\n","/content/drive/MyDrive/ISRO/high_res/278323.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/278323.png\n","/content/drive/MyDrive/ISRO/high_res/472750.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/472750.png\n","/content/drive/MyDrive/ISRO/high_res/393659.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/393659.png\n","/content/drive/MyDrive/ISRO/high_res/387254.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/387254.png\n","/content/drive/MyDrive/ISRO/high_res/77331.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/77331.png\n","/content/drive/MyDrive/ISRO/high_res/81805.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/81805.png\n","/content/drive/MyDrive/ISRO/high_res/323706.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/323706.png\n","/content/drive/MyDrive/ISRO/high_res/362096.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/362096.png\n","/content/drive/MyDrive/ISRO/high_res/26882.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/26882.png\n","/content/drive/MyDrive/ISRO/high_res/95060.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/95060.png\n","/content/drive/MyDrive/ISRO/high_res/148366.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/148366.png\n","/content/drive/MyDrive/ISRO/high_res/309356.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/309356.png\n","/content/drive/MyDrive/ISRO/high_res/294933.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/294933.png\n","/content/drive/MyDrive/ISRO/high_res/291392.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/291392.png\n","/content/drive/MyDrive/ISRO/high_res/271821.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/271821.png\n","/content/drive/MyDrive/ISRO/high_res/117100.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/117100.png\n","/content/drive/MyDrive/ISRO/high_res/461709.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/461709.png\n","/content/drive/MyDrive/ISRO/high_res/279626.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/279626.png\n","/content/drive/MyDrive/ISRO/high_res/447946.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/447946.png\n","/content/drive/MyDrive/ISRO/high_res/446767.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/446767.png\n","/content/drive/MyDrive/ISRO/high_res/177462.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/177462.png\n","/content/drive/MyDrive/ISRO/high_res/146354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ive/ISRO/val_pred_ohrc/207245.png\n","/content/drive/MyDrive/ISRO/high_res/210597.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/210597.png\n","/content/drive/MyDrive/ISRO/high_res/211167.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/211167.png\n","/content/drive/MyDrive/ISRO/high_res/229272.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/229272.png\n","/content/drive/MyDrive/ISRO/high_res/234873.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/234873.png\n","/content/drive/MyDrive/ISRO/high_res/240625.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/240625.png\n","/content/drive/MyDrive/ISRO/high_res/264495.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/264495.png\n","/content/drive/MyDrive/ISRO/high_res/2765.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/2765.png\n","/content/drive/MyDrive/ISRO/high_res/287174.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/287174.png\n","/content/drive/MyDrive/ISRO/high_res/292906.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/292906.png\n","/content/drive/MyDrive/ISRO/high_res/294158.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/294158.png\n","/content/drive/MyDrive/ISRO/high_res/308386.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/308386.png\n","/content/drive/MyDrive/ISRO/high_res/313621.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/313621.png\n","/content/drive/MyDrive/ISRO/high_res/317706.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/317706.png\n","/content/drive/MyDrive/ISRO/high_res/319333.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/319333.png\n","/content/drive/MyDrive/ISRO/high_res/324969.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/324969.png\n","/content/drive/MyDrive/ISRO/high_res/325370.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/325370.png\n","/content/drive/MyDrive/ISRO/high_res/346126.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/346126.png\n","/content/drive/MyDrive/ISRO/high_res/396164.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/396164.png\n","/content/drive/MyDrive/ISRO/high_res/411229.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/411229.png\n","/content/drive/MyDrive/ISRO/high_res/430143.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/430143.png\n","/content/drive/MyDrive/ISRO/high_res/441136.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/441136.png\n","/content/drive/MyDrive/ISRO/high_res/450376.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/450376.png\n","/content/drive/MyDrive/ISRO/high_res/451637.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/451637.png\n","/content/drive/MyDrive/ISRO/high_res/4526.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/4526.png\n","/content/drive/MyDrive/ISRO/high_res/466248.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/466248.png\n","/content/drive/MyDrive/ISRO/high_res/50186.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/50186.png\n","/content/drive/MyDrive/ISRO/high_res/58996.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/58996.png\n","/content/drive/MyDrive/ISRO/high_res/6037.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/6037.png\n","/content/drive/MyDrive/ISRO/high_res/6362.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/6362.png\n","/content/drive/MyDrive/ISRO/high_res/64579.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/64579.png\n","/content/drive/MyDrive/ISRO/high_res/68741.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/68741.png\n","/content/drive/MyDrive/ISRO/high_res/68885.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/68885.png\n","/content/drive/MyDrive/ISRO/high_res/86222.png\n","/content/drive/MyDrive/ISRO/val_pred_ohrc/86222.png\n","Average PSNR is nan\n","Average ISSM is nan\n","Average FSIM is 0.4284039311571595\n","Average SSIM is nan\n"]}]},{"cell_type":"markdown","source":["Compare Metrics one image at a time"],"metadata":{"id":"-w6RNP_lLJxr"}},{"cell_type":"code","source":["!image-similarity-measures --org_img_path=content/drive/MyDrive/ISRO/high_res/172708.png --pred_img_path=/content/drive/MyDrive/ISRO/val_pred_ohrc/101033.png --metric all"],"metadata":{"colab":{"base_uri":"https://localhost:8080/"},"id":"EjxZkB-l7Xod","executionInfo":{"status":"ok","timestamp":1675875694521,"user_tz":-330,"elapsed":1633,"user":{"displayName":"Inter IIT","userId":"08418003247324276874"}},"outputId":"e5188178-1764-4cec-f9b9-98ae9e831b26"},"execution_count":12,"outputs":[{"output_type":"stream","name":"stdout","text":["2023-02-08 17:01:33,469 - image_similarity_measures.evaluate - INFO - Reading image 172708.png\n","[ WARN:0@0.590] global /io/opencv/modules/imgcodecs/src/loadsave.cpp (239) findDecoder imread_('content/drive/MyDrive/ISRO/high_res/172708.png'): can't open/read file: check file path/integrity\n","2023-02-08 17:01:33,469 - image_similarity_measures.evaluate - INFO - Reading image 172708.png\n","[ WARN:0@0.590] global /io/opencv/modules/imgcodecs/src/loadsave.cpp (239) findDecoder imread_('content/drive/MyDrive/ISRO/val_pred_ohrc/172708.png'): can't open/read file: check file path/integrity\n","Traceback (most recent call last):\n","  File \"/usr/local/bin/image-similarity-measures\", line 8, in <module>\n","    sys.exit(main())\n","  File \"/usr/local/lib/python3.8/dist-packages/image_similarity_measures/evaluate.py\", line 53, in main\n","    metric_values = evaluation(\n","  File \"/usr/local/lib/python3.8/dist-packages/image_similarity_measures/evaluate.py\", line 29, in evaluation\n","    out_value = float(metric_func(org_img, pred_img))\n","  File \"/usr/local/lib/python3.8/dist-packages/image_similarity_measures/quality_metrics.py\", line 104, in fsim\n","    _assert_image_shapes_equal(org_img, pred_img, \"FSIM\")\n","  File \"/usr/local/lib/python3.8/dist-packages/image_similarity_measures/quality_metrics.py\", line 14, in _assert_image_shapes_equal\n","    msg = (f\"Cannot calculate {metric}. Input shapes not identical. y_true shape =\"\n","AttributeError: 'NoneType' object has no attribute 'shape'\n"]}]},{"cell_type":"code","source":[],"metadata":{"id":"CClqqjgi6r5f"},"execution_count":null,"outputs":[]}]}