From 735c7237881eb6527d575a42ad70af6b2de7ffa8 Mon Sep 17 00:00:00 2001 From: ybradford Date: Fri, 9 Dec 2022 08:57:09 -0800 Subject: [PATCH] release --- src/ontology/imports/ro_import.owl | 246 +- .../reports/zfa-edit.obo-obo-report.tsv | 253 +- zfa-base.json | 1472 +- zfa-base.obo | 12870 ++++++++-------- zfa-base.owl | 1199 +- zfa-full.json | 1357 +- zfa-full.obo | 4677 +++--- zfa-full.owl | 1049 +- zfa-simple.json | 1357 +- zfa-simple.obo | 4677 +++--- zfa-simple.owl | 1141 +- zfa-zfin.json | 1472 +- zfa-zfin.obo | 12870 ++++++++-------- zfa-zfin.owl | 1199 +- zfa.json | 1472 +- zfa.obo | 12870 ++++++++-------- zfa.owl | 1199 +- 17 files changed, 37060 insertions(+), 24320 deletions(-) diff --git a/src/ontology/imports/ro_import.owl b/src/ontology/imports/ro_import.owl index 5f14689..19402bb 100644 --- a/src/ontology/imports/ro_import.owl +++ b/src/ontology/imports/ro_import.owl @@ -16,9 +16,9 @@ xmlns:subsets="http://purl.obolibrary.org/obo/ro/subsets#" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - - - 2022-03-15 + + + 2022-12-09 @@ -144,6 +144,12 @@ + + + + + + @@ -856,6 +862,7 @@ A continuant cannot have an occurrent as part: use 'participates in'. + @@ -897,6 +904,7 @@ A continuant cannot have an occurrent as part: use 'participates in'. + @@ -981,9 +989,7 @@ A continuant cannot have an occurrent as part: use 'participates in'. - - process(P1) regulates process(P2) iff: P1 results in the initiation or termination of P2 OR affects the frequency of its initiation or termination OR affects the magnitude or rate of output of P2. - We use 'regulates' here to specifically imply control. However, many colloquial usages of the term correctly correspond to the weaker relation of 'causally upstream of or within' (aka influences). Consider relabeling to make things more explicit + p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q. Chris Mungall David Hill Tanya Berardini @@ -1006,7 +1012,7 @@ A continuant cannot have an occurrent as part: use 'participates in'. - Process(P1) negatively regulates process(P2) iff: P1 terminates P2, or P1 descreases the the frequency of initiation of P2 or the magnitude or rate of output of P2. + p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q. Chris Mungall negatively regulates (process to process) @@ -1030,7 +1036,7 @@ A continuant cannot have an occurrent as part: use 'participates in'. - Process(P1) postively regulates process(P2) iff: P1 initiates P2, or P1 increases the the frequency of initiation of P2 or the magnitude or rate of output of P2. + p positively regulates q iff p regulates q, and p increases the rate or magnitude of execution of q. Chris Mungall positively regulates (process to process) @@ -1234,6 +1240,7 @@ A continuant cannot have an occurrent as part: use 'participates in'. + p is causally upstream of, positive effect q iff p is casually upstream of q, and the execution of p is required for the execution of q. cjm @@ -1249,9 +1256,11 @@ A continuant cannot have an occurrent as part: use 'participates in'. + p is causally upstream of, negative effect q iff p is casually upstream of q, and the execution of p decreases the execution of q. cjm - holds between x and y if and only if x is causally upstream of y and the progression of x decreases the frequency, rate or extent of y + + causally upstream of, negative effect @@ -1327,6 +1336,7 @@ A continuant cannot have an occurrent as part: use 'participates in'. a particular instances of akt-2 enables some instance of protein kinase activity + c enables p iff c is capable of p and c acts to execute p. Chris Mungall catalyzes executes @@ -1543,18 +1553,75 @@ A continuant cannot have an occurrent as part: use 'participates in'. + + + + + + + + + + + + + + + + + + + + + + + p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q. + Chris Mungall + indirectly activates + + indirectly positively regulates + + + + + + + + + + + + + + + + + + + + + + + p indirectly negatively regulates q iff p is indirectly causally upstream of q and p negatively regulates q. + Chris Mungall + indirectly inhibits + + indirectly negatively regulates + + + + - - This relation groups causal relations between material entities and causal relations between processes + relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause. This branch of the ontology deals with causal relations between entities. It is divided into two branches: causal relations between occurrents/processes, and causal relations between material entities. We take an 'activity flow-centric approach', with the former as primary, and define causal relations between material entities in terms of causal relations between occurrents. To define causal relations in an activity-flow type network, we make use of 3 primitives: * Temporal: how do the intervals of the two occurrents relate? * Is the causal relation regulatory? - * Is the influence positive or negative + * Is the influence positive or negative? The first of these can be formalized in terms of the Allen Interval Algebra. Informally, the 3 bins we care about are 'direct', 'indirect' or overlapping. Note that all causal relations should be classified under a RO temporal relation (see the branch under 'temporally related to'). Note that all causal relations are temporal, but not all temporal relations are causal. Two occurrents can be related in time without being causally connected. We take causal influence to be primitive, elucidated as being such that has the upstream changed, some qualities of the donwstream would necessarily be modified. @@ -1567,6 +1634,12 @@ Each of these 3 primitives can be composed to yield a cross-product of different Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect. causally related to + + + + relation that links two events, processes, states, or objects such that one event, process, state, or object (a cause) contributes to the production of another event, process, state, or object (an effect) where the cause is partly or wholly responsible for the effect, and the effect is partly or wholly dependent on the cause. + https://en.wikipedia.org/wiki/Causality + @@ -1576,8 +1649,7 @@ Each of these 3 primitives can be composed to yield a cross-product of different - - p is causally upstream of q if and only if p precedes q and p and q are linked in a causal chain + p is causally upstream of q iff p is causally related to q, the end of p precedes the end of q, and p is not an occurrent part of q. Chris Mungall @@ -1591,8 +1663,7 @@ Each of these 3 primitives can be composed to yield a cross-product of different - - p is immediately causally upstream of q iff both (a) p immediately precedes q and (b) p is causally upstream of q. In addition, the output of p must be an input of q. + p is immediately causally upstream of q iff p is causally upstream of q, and the end of p is coincident with the beginning of q. Chris Mungall immediately causally upstream of @@ -1606,7 +1677,7 @@ Each of these 3 primitives can be composed to yield a cross-product of different - p 'causally upstream or within' q iff (1) the end of p is before the end of q and (2) the execution of p exerts some causal influence over the outputs of q; i.e. if p was abolished or the outputs of p were to be modified, this would necessarily affect q. + p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q. We would like to make this disjoint with 'preceded by', but this is prohibited in OWL2 Chris Mungall influences (processual) @@ -1926,7 +1997,7 @@ For example, A and B may be gene products and binding of B by A positively regul - p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one of direct activation or direct inhibition. p may be upstream, downstream, part of or a container of q. + p is causally related to q if and only if p or any part of p and q or any part of q are linked by a chain of events where each event pair is one where the execution of p influences the execution of q. p may be upstream, downstream, part of, or a container of q. Chris Mungall Do not use this relation directly. It is intended as a grouping for a diverse set of relations, all involving cause and effect. @@ -2026,7 +2097,7 @@ For example, A and B may be gene products and binding of B by A positively regul - Process(P1) directly regulates process(P2) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding regulates the kinase activity (P2) of protein B then P1 directly regulates P2. + p directly regulates q iff p is immediately causally upstream of q and p regulates q. Chris Mungall directly regulates (processual) @@ -2134,7 +2205,7 @@ For example, A and B may be gene products and binding of B by A positively regul - Process(P1) directly postively regulates process(P2) iff: P1 positively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding positively regulates the kinase activity (P2) of protein B then P1 directly positively regulates P2. + p directly positively regulates q iff p is immediately causally upstream of q, and p positively regulates q. directly positively regulates (process to process) @@ -2151,7 +2222,7 @@ For example, A and B may be gene products and binding of B by A positively regul - Process(P1) directly negatively regulates process(P2) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2). For example, if protein A has protein binding activity(P1) that targets protein B and this binding negatively regulates the kinase activity (P2) of protein B then P1 directly negatively regulates P2. + p directly negatively regulates q iff p is immediately causally upstream of q, and p negatively regulates q. directly negatively regulates (process to process) @@ -2291,6 +2362,31 @@ For example, A and B may be gene products and binding of B by A positively regul + + + + + p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q. + pg + 2022-09-26T06:07:17Z + indirectly causally upstream of + + + + + + + + + + p indirectly regulates q iff p is indirectly causally upstream of q and p regulates q. + pg + 2022-09-26T06:08:01Z + indirectly regulates + + + + @@ -2299,13 +2395,14 @@ For example, A and B may be gene products and binding of B by A positively regul A diagnostic testing device utilizes a specimen. - X utilizes Y means X and Y are material entities, and X is capable of some process P that has input Y. - Asiyah Lin - https://orcid.org/0000-0001-9625-1899 Bill Duncan + X device utilizes material Y means X and Y are material entities, and X is capable of some process P that has input Y. + https://orcid.org/0000-0001-9625-1899 + https://orcid.org/0000-0003-2620-0345 A diagnostic testing device utilizes a specimen means that the diagnostic testing device is capable of an assay, and this assay a specimen as its input. See github ticket https://github.com/oborel/obo-relations/issues/497 - 2021-11-08 - utilizes + 2021-11-08T12:00:00Z + utilizes + device utilizes material @@ -2737,6 +2834,12 @@ For example, A and B may be gene products and binding of B by A positively regul + + + + + + @@ -2746,6 +2849,9 @@ For example, A and B may be gene products and binding of B by A positively regul + + + @@ -3743,6 +3849,50 @@ e.g. if GP X enables ATPase coupled transporter activity' and 'ATPase + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + @@ -3919,6 +4069,50 @@ e.g. if GP X enables ATPase coupled transporter activity' and 'ATPase + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + diff --git a/src/ontology/reports/zfa-edit.obo-obo-report.tsv b/src/ontology/reports/zfa-edit.obo-obo-report.tsv index 185410b..16f07e6 100644 --- a/src/ontology/reports/zfa-edit.obo-obo-report.tsv +++ b/src/ontology/reports/zfa-edit.obo-obo-report.tsv @@ -1,8 +1,76 @@ Level Rule Name Subject Property Value -ERROR duplicate_definition myotome somite 26 definition Portion of somite 16 that gives rise to body wall muscle masses. -ERROR duplicate_definition myotome somite 16 definition Portion of somite 16 that gives rise to body wall muscle masses. -ERROR duplicate_definition posterior lateral line definition One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.) -ERROR duplicate_definition dorsal lateral line definition One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.) +ERROR duplicate_label larva rdfs:label larva +ERROR duplicate_label larva rdfs:label larva +ERROR duplicate_label juvenile rdfs:label juvenile +ERROR duplicate_label juvenile rdfs:label juvenile +ERROR duplicate_label adult rdfs:label adult +ERROR duplicate_label adult rdfs:label adult +WARN missing_obsolete_label anatomical set rdfs:label anatomical set +WARN missing_obsolete_label sensory axons peripheral rdfs:label sensory axons peripheral +WARN missing_obsolete_label embryo rdfs:label embryo +WARN missing_obsolete_label lateral cells rdfs:label lateral cells +WARN missing_obsolete_label mesenchyme condensations rdfs:label mesenchyme condensations +WARN missing_obsolete_label antorbital rdfs:label antorbital +WARN missing_obsolete_label basisphenoid rdfs:label basisphenoid +WARN missing_obsolete_label epicentrals rdfs:label epicentrals +WARN missing_obsolete_label hypobranchial vessel rdfs:label hypobranchial vessel +WARN missing_obsolete_label larva rdfs:label larva +WARN missing_obsolete_label opercular-branchiostegal series rdfs:label opercular-branchiostegal series +WARN missing_obsolete_label supramaxillae rdfs:label supramaxillae +WARN missing_obsolete_label hypural arches rdfs:label hypural arches +WARN missing_obsolete_label dermopalatine rdfs:label dermopalatine +WARN missing_obsolete_label duodenum rdfs:label duodenum +WARN missing_obsolete_label infraorbital bridge rdfs:label infraorbital bridge +WARN missing_obsolete_label juvenile rdfs:label juvenile +WARN missing_obsolete_label last preural centrum rdfs:label last preural centrum +WARN missing_obsolete_label stomach rdfs:label stomach +WARN missing_obsolete_label Mauthner axon rdfs:label Mauthner axon +WARN missing_obsolete_label medial pterygiophores anal fin rdfs:label medial pterygiophores anal fin +WARN missing_obsolete_label supraorbital series rdfs:label supraorbital series +WARN missing_obsolete_label brachium conjunctivum rdfs:label brachium conjunctivum +WARN missing_obsolete_label dental plate rdfs:label dental plate +WARN missing_obsolete_label ural ossification rdfs:label ural ossification +WARN missing_obsolete_label presumptive neuron neural tube rdfs:label presumptive neuron neural tube +WARN missing_obsolete_label facial neural crest rdfs:label facial neural crest +WARN missing_obsolete_label medial pterygiophores dorsal fin rdfs:label medial pterygiophores dorsal fin +WARN missing_obsolete_label peripheral motor axons rdfs:label peripheral motor axons +WARN missing_obsolete_label adult rdfs:label adult +WARN missing_obsolete_label pars tuberalis rdfs:label pars tuberalis +WARN missing_obsolete_label pharyngobranchial 1 rdfs:label pharyngobranchial 1 +WARN missing_obsolete_label pharyngobranchial 2+3 rdfs:label pharyngobranchial 2+3 +WARN missing_obsolete_label cranial motoneurons rdfs:label cranial motoneurons +WARN missing_obsolete_label mentomeckelian rdfs:label mentomeckelian +WARN missing_obsolete_label visceral organ rdfs:label visceral organ +WARN missing_obsolete_label presumptive cardinal organ rdfs:label presumptive cardinal organ +WARN missing_obsolete_label presumptive organ rdfs:label presumptive organ +WARN missing_obsolete_label presumptive organ system rdfs:label presumptive organ system +WARN missing_obsolete_label axial bone rdfs:label axial bone +WARN missing_obsolete_label chondrocranium bone rdfs:label chondrocranium bone +WARN missing_obsolete_label cranial bone rdfs:label cranial bone +WARN missing_obsolete_label pharyngeal arch bone rdfs:label pharyngeal arch bone +WARN missing_obsolete_label dermatocranium bone rdfs:label dermatocranium bone +WARN missing_obsolete_label axial fin bone rdfs:label axial fin bone +WARN missing_obsolete_label paired fin bone rdfs:label paired fin bone +WARN missing_obsolete_label fin bone rdfs:label fin bone +WARN missing_obsolete_label pons rdfs:label pons +WARN missing_obsolete_label distal conduction system rdfs:label distal conduction system +WARN missing_obsolete_label lymph node rdfs:label lymph node +WARN missing_obsolete_label metanephric mesenchyme stem cell rdfs:label metanephric mesenchyme stem cell +WARN missing_obsolete_label non-visual cell (sensu Vertebrata) rdfs:label non-visual cell (sensu Vertebrata) +WARN duplicate_exact_synonym renal capsular space has_exact_synonym urinary space +WARN duplicate_exact_synonym pronephric capsular space has_exact_synonym urinary space +WARN duplicate_exact_synonym rostral octaval nerve motor nucleus has_exact_synonym rostral cranial nerve VIII motor nucleus +WARN duplicate_exact_synonym caudal octaval nerve motor nucleus has_exact_synonym rostral cranial nerve VIII motor nucleus +WARN duplicate_exact_synonym renal capsular space has_exact_synonym inter-glomerular space +WARN duplicate_exact_synonym pronephric capsular space has_exact_synonym inter-glomerular space +WARN duplicate_exact_synonym follicle stimulating hormone secreting cell has_exact_synonym gonadotrope +WARN duplicate_exact_synonym luteinizing hormone secreting cell has_exact_synonym gonadotrope +WARN duplicate_exact_synonym renal capsular space has_exact_synonym Bowman's space +WARN duplicate_exact_synonym pronephric capsular space has_exact_synonym Bowman's space +WARN duplicate_exact_synonym renal glomerular capsule has_exact_synonym Bowman's capsule +WARN duplicate_exact_synonym pronephric glomerular capsule has_exact_synonym Bowman's capsule +WARN duplicate_exact_synonym supracleithrum-vertebral ligament has_exact_synonym Baudelot's ligament +WARN duplicate_exact_synonym cleithrum-vertebral ligament has_exact_synonym Baudelot's ligament WARN missing_definition part of definition WARN missing_definition has_part definition WARN missing_definition definition definition @@ -331,52 +399,60 @@ WARN missing_definition stratified keratinized epithelial stem cell definition WARN missing_definition kidney interstitial cell definition WARN missing_definition kidney medulla cell definition WARN missing_definition zebrafish anatomical entity definition -WARN missing_definition Unknown definition -WARN missing_definition Zygote:1-cell definition -WARN missing_definition Cleavage:2-cell definition -WARN missing_definition Cleavage:4-cell definition -WARN missing_definition Cleavage:8-cell definition -WARN missing_definition Cleavage:16-cell definition -WARN missing_definition Cleavage:32-cell definition -WARN missing_definition Cleavage:64-cell definition -WARN missing_definition Blastula:128-cell definition -WARN missing_definition Blastula:256-cell definition -WARN missing_definition Blastula:512-cell definition -WARN missing_definition Blastula:1k-cell definition -WARN missing_definition Blastula:High definition -WARN missing_definition Blastula:Oblong definition -WARN missing_definition Blastula:Sphere definition -WARN missing_definition Blastula:Dome definition -WARN missing_definition Blastula:30%-epiboly definition -WARN missing_definition Gastrula:50%-epiboly definition -WARN missing_definition Gastrula:Germ-ring definition -WARN missing_definition Gastrula:Shield definition -WARN missing_definition Gastrula:75%-epiboly definition -WARN missing_definition Gastrula:90%-epiboly definition -WARN missing_definition Gastrula:Bud definition -WARN missing_definition Segmentation:1-4 somites definition -WARN missing_definition Segmentation:5-9 somites definition -WARN missing_definition Segmentation:10-13 somites definition -WARN missing_definition Segmentation:14-19 somites definition -WARN missing_definition Segmentation:20-25 somites definition -WARN missing_definition Segmentation:26+ somites definition -WARN missing_definition Pharyngula:Prim-5 definition -WARN missing_definition Pharyngula:Prim-15 definition -WARN missing_definition Pharyngula:Prim-25 definition -WARN missing_definition Pharyngula:High-pec definition -WARN missing_definition Hatching:Long-pec definition -WARN missing_definition Hatching:Pec-fin definition -WARN missing_definition Larval:Protruding-mouth definition -WARN missing_definition Larval:Day 4 definition -WARN missing_definition Larval:Day 5 definition -WARN missing_definition Larval:Day 6 definition -WARN missing_definition Larval:Days 7-13 definition -WARN missing_definition Larval:Days 14-20 definition -WARN missing_definition Larval:Days 21-29 definition -WARN missing_definition Juvenile:Days 30-44 definition -WARN missing_definition Juvenile:Days 45-89 definition -WARN missing_definition Adult definition -WARN missing_definition Stages definition +WARN missing_definition unknown definition +WARN missing_definition zygote:1-cell definition +WARN missing_definition cleavage:2-cell definition +WARN missing_definition cleavage:4-cell definition +WARN missing_definition cleavage:8-cell definition +WARN missing_definition cleavage:16-cell definition +WARN missing_definition cleavage:32-cell definition +WARN missing_definition cleavage:64-cell definition +WARN missing_definition blastula:128-cell definition +WARN missing_definition blastula:256-cell definition +WARN missing_definition blastula:512-cell definition +WARN missing_definition blastula:1k-cell definition +WARN missing_definition blastula:high definition +WARN missing_definition blastula:oblong definition +WARN missing_definition blastula:sphere definition +WARN missing_definition blastula:dome definition +WARN missing_definition blastula:30%-epiboly definition +WARN missing_definition gastrula:50%-epiboly definition +WARN missing_definition gastrula:germ-ring definition +WARN missing_definition gastrula:shield definition +WARN missing_definition gastrula:75%-epiboly definition +WARN missing_definition gastrula:90%-epiboly definition +WARN missing_definition gastrula:bud definition +WARN missing_definition segmentation:1-4 somites definition +WARN missing_definition segmentation:5-9 somites definition +WARN missing_definition segmentation:10-13 somites definition +WARN missing_definition segmentation:14-19 somites definition +WARN missing_definition segmentation:20-25 somites definition +WARN missing_definition segmentation:26+ somites definition +WARN missing_definition pharyngula:prim-5 definition +WARN missing_definition pharyngula:prim-15 definition +WARN missing_definition pharyngula:prim-25 definition +WARN missing_definition pharyngula:high-pec definition +WARN missing_definition hatching:long-pec definition +WARN missing_definition hatching:pec-fin definition +WARN missing_definition larval:protruding-mouth definition +WARN missing_definition larval:day 4 definition +WARN missing_definition larval:day 5 definition +WARN missing_definition larval:day 6 definition +WARN missing_definition larval:days 7-13 definition +WARN missing_definition larval:days 14-20 definition +WARN missing_definition larval:days 21-29 definition +WARN missing_definition juvenile:days 30-44 definition +WARN missing_definition juvenile:days 45-89 definition +WARN missing_definition adult definition +WARN missing_definition blastula definition +WARN missing_definition cleavage definition +WARN missing_definition gastrula definition +WARN missing_definition larva definition +WARN missing_definition segmentation definition +WARN missing_definition pharyngula definition +WARN missing_definition juvenile definition +WARN missing_definition hatching definition +WARN missing_definition zebrafish stage definition WARN missing_definition PLURAL definition WARN missing_definition subset_property definition WARN missing_definition synonym_type_property definition @@ -393,82 +469,7 @@ WARN missing_definition has_synonym_type definition WARN missing_definition in_subset definition WARN missing_definition shorthand definition WARN missing_definition treat-xrefs-as-genus-differentia definition -WARN duplicate_exact_synonym renal capsular space has_exact_synonym urinary space -WARN duplicate_exact_synonym pronephric capsular space has_exact_synonym urinary space -WARN duplicate_exact_synonym rostral octaval nerve motor nucleus has_exact_synonym rostral cranial nerve VIII motor nucleus -WARN duplicate_exact_synonym caudal octaval nerve motor nucleus has_exact_synonym rostral cranial nerve VIII motor nucleus -WARN duplicate_exact_synonym renal capsular space has_exact_synonym inter-glomerular space -WARN duplicate_exact_synonym pronephric capsular space has_exact_synonym inter-glomerular space -WARN duplicate_exact_synonym follicle stimulating hormone secreting cell has_exact_synonym gonadotrope -WARN duplicate_exact_synonym luteinizing hormone secreting cell has_exact_synonym gonadotrope -WARN duplicate_exact_synonym renal capsular space has_exact_synonym Bowman's space -WARN duplicate_exact_synonym pronephric capsular space has_exact_synonym Bowman's space -WARN duplicate_exact_synonym renal glomerular capsule has_exact_synonym Bowman's capsule -WARN duplicate_exact_synonym pronephric glomerular capsule has_exact_synonym Bowman's capsule -WARN duplicate_exact_synonym supracleithrum-vertebral ligament has_exact_synonym Baudelot's ligament -WARN duplicate_exact_synonym cleithrum-vertebral ligament has_exact_synonym Baudelot's ligament -WARN missing_obsolete_label anatomical set rdfs:label anatomical set -WARN missing_obsolete_label sensory axons peripheral rdfs:label sensory axons peripheral -WARN missing_obsolete_label embryo rdfs:label embryo -WARN missing_obsolete_label lateral cells rdfs:label lateral cells -WARN missing_obsolete_label mesenchyme condensations rdfs:label mesenchyme condensations -WARN missing_obsolete_label antorbital rdfs:label antorbital -WARN missing_obsolete_label basisphenoid rdfs:label basisphenoid -WARN missing_obsolete_label epicentrals rdfs:label epicentrals -WARN missing_obsolete_label hypobranchial vessel rdfs:label hypobranchial vessel -WARN missing_obsolete_label larva rdfs:label larva -WARN missing_obsolete_label opercular-branchiostegal series rdfs:label opercular-branchiostegal series -WARN missing_obsolete_label supramaxillae rdfs:label supramaxillae -WARN missing_obsolete_label hypural arches rdfs:label hypural arches -WARN missing_obsolete_label dermopalatine rdfs:label dermopalatine -WARN missing_obsolete_label duodenum rdfs:label duodenum -WARN missing_obsolete_label infraorbital bridge rdfs:label infraorbital bridge -WARN missing_obsolete_label juvenile rdfs:label juvenile -WARN missing_obsolete_label last preural centrum rdfs:label last preural centrum -WARN missing_obsolete_label stomach rdfs:label stomach -WARN missing_obsolete_label Mauthner axon rdfs:label Mauthner axon -WARN missing_obsolete_label medial pterygiophores anal fin rdfs:label medial pterygiophores anal fin -WARN missing_obsolete_label supraorbital series rdfs:label supraorbital series -WARN missing_obsolete_label brachium conjunctivum rdfs:label brachium conjunctivum -WARN missing_obsolete_label dental plate rdfs:label dental plate -WARN missing_obsolete_label ural ossification rdfs:label ural ossification -WARN missing_obsolete_label presumptive neuron neural tube rdfs:label presumptive neuron neural tube -WARN missing_obsolete_label facial neural crest rdfs:label facial neural crest -WARN missing_obsolete_label medial pterygiophores dorsal fin rdfs:label medial pterygiophores dorsal fin -WARN missing_obsolete_label peripheral motor axons rdfs:label peripheral motor axons -WARN missing_obsolete_label adult rdfs:label adult -WARN missing_obsolete_label pars tuberalis rdfs:label pars tuberalis -WARN missing_obsolete_label pharyngobranchial 1 rdfs:label pharyngobranchial 1 -WARN missing_obsolete_label pharyngobranchial 2+3 rdfs:label pharyngobranchial 2+3 -WARN missing_obsolete_label cranial motoneurons rdfs:label cranial motoneurons -WARN missing_obsolete_label mentomeckelian rdfs:label mentomeckelian -WARN missing_obsolete_label visceral organ rdfs:label visceral organ -WARN missing_obsolete_label presumptive cardinal organ rdfs:label presumptive cardinal organ -WARN missing_obsolete_label presumptive organ rdfs:label presumptive organ -WARN missing_obsolete_label presumptive organ system rdfs:label presumptive organ system -WARN missing_obsolete_label axial bone rdfs:label axial bone -WARN missing_obsolete_label chondrocranium bone rdfs:label chondrocranium bone -WARN missing_obsolete_label cranial bone rdfs:label cranial bone -WARN missing_obsolete_label pharyngeal arch bone rdfs:label pharyngeal arch bone -WARN missing_obsolete_label dermatocranium bone rdfs:label dermatocranium bone -WARN missing_obsolete_label axial fin bone rdfs:label axial fin bone -WARN missing_obsolete_label paired fin bone rdfs:label paired fin bone -WARN missing_obsolete_label fin bone rdfs:label fin bone -WARN missing_obsolete_label pons rdfs:label pons -WARN missing_obsolete_label distal conduction system rdfs:label distal conduction system -WARN missing_obsolete_label lymph node rdfs:label lymph node -WARN missing_obsolete_label metanephric mesenchyme stem cell rdfs:label metanephric mesenchyme stem cell -WARN missing_obsolete_label non-visual cell (sensu Vertebrata) rdfs:label non-visual cell (sensu Vertebrata) WARN duplicate_label_synonym maxillo-mandibular ligament has_exact_synonym maxillo-mandibular ligament -WARN annotation_whitespace corpus cerebelli has_exact_synonym corpus cerebelli granular layer -WARN annotation_whitespace superior caudal dorsal flexor has_exact_synonym flexor caudalis dorsalis superioris -WARN annotation_whitespace upper oral valve has_exact_synonym upper semilunar valve -WARN annotation_whitespace dilatator operculi has_exact_synonym dilatator opercula -WARN annotation_whitespace facial lobe has_related_synonym tuberculum impar of Herrick -WARN annotation_whitespace posttemporal has_related_synonym post-temporal -WARN annotation_whitespace statoacoustic (VIII) ganglion has_exact_synonym octaval ganglion -WARN annotation_whitespace torus semicircularis has_exact_synonym semicircular torus -WARN annotation_whitespace ventral transverse has_exact_synonym transversus ventralis WARN annotation_whitespace caudal hypothalamic zone has_exact_synonym hypothalamus pars tuberalis WARN annotation_whitespace telencephalic ventricle has_exact_synonym ventriculi telencephali WARN annotation_whitespace intestinal bulb has_exact_synonym pseudogaster @@ -552,7 +553,7 @@ WARN annotation_whitespace posterior hypaxial muscle has_exact_synonym ventral-m WARN annotation_whitespace norepinephrine secreting cell has_exact_synonym noradrenergic cell WARN annotation_whitespace immature natural killer cell has_exact_synonym immature NK cell INFO missing_superclass zebrafish anatomical entity rdfs:subClassOf -INFO missing_superclass Stages rdfs:subClassOf +INFO missing_superclass zebrafish stage rdfs:subClassOf INFO lowercase_definition has developmental contribution from definition x has developmental contribution from y iff x has some part z such that z develops from y. INFO lowercase_definition start stage definition c existence starts during s iff start_of(c) part_of s. INFO lowercase_definition end stage definition c existence ends during s iff end_of(c) part_of s. diff --git a/zfa-base.json b/zfa-base.json index a39fcca..1f3054f 100644 --- a/zfa-base.json +++ b/zfa-base.json @@ -8,6 +8,11 @@ "pred": "inverseOf", "sub": "http://purl.obolibrary.org/obo/BFO_0000050" }, + { + "obj": "http://purl.obolibrary.org/obo/BFO_0000062", + "pred": "subPropertyOf", + "sub": "http://purl.obolibrary.org/obo/RO_0002087" + }, { "obj": "http://purl.obolibrary.org/obo/RO_0002131", "pred": "subPropertyOf", @@ -398,6 +403,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005075" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000009", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000010", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -628,6 +638,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0000329" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000020", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005943" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000022", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -3608,6 +3623,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005068" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000173", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000175", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -5238,6 +5258,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005658" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000385", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005955" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000386", "pred": "is_a", @@ -24518,6 +24543,16 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005814" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005811", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005952" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005811", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005953" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0005818", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -24848,6 +24883,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005862" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005844", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0005844", "pred": "is_a", @@ -25368,6 +25408,41 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0009181" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005949", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005949", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005952", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005952", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005955", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005957", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005956" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005957", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0006000", "pred": "http://purl.obolibrary.org/obo/RO_0002202", @@ -26348,6 +26423,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005944" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", "pred": "is_a", @@ -26683,11 +26763,6 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0009306" }, - { - "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", - "pred": "is_a", - "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" - }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", "pred": "is_a", @@ -29148,6 +29223,26 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005929" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005947" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005948" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009265", "pred": "http://purl.obolibrary.org/obo/RO_0002202", @@ -35748,6 +35843,46 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005941" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005942" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005947" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005948" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005952" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005953" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005955" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005956" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -38668,6 +38803,11 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005772" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000001", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005943" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000001", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -44633,6 +44773,11 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0005738" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000032", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005943" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -45098,6 +45243,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005926" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -48858,6 +49013,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005800" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -49148,6 +49313,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005769" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -58363,11 +58538,81 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0005941" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005942" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0005944" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005947" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005948" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005952" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005953" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005955" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005956" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", "pred": "http://purl.obolibrary.org/obo/RO_0002497", @@ -60493,6 +60738,251 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0009404" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000008" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000009" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000010" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000011" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000012" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000013" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000014" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000015" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000016" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/RO_0002087", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000047" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000002" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000003" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000004" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000005" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000006" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000007" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/RO_0002087", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000045" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000017" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": 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"http://purl.obolibrary.org/obo/IAO_0000700", + "val": "http://purl.obolibrary.org/obo/ZFS_0100000" + }, { "pred": "http://purl.org/dc/elements/1.1/description", "val": "ZFA description." @@ -60742,11 +61280,11 @@ }, { "pred": "http://www.geneontology.org/formats/oboInOwl#auto-generated-by", - "val": "OBO-Edit 2.3.1" + "val": "OBO-Edit 2.3-beta5" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#date", - "val": "08:03:2021 11:16" + "val": "29:11:2022 16:29" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#default-namespace", @@ -60758,7 +61296,7 @@ }, { "pred": "http://www.geneontology.org/formats/oboInOwl#saved-by", - "val": "ceriv" + "val": "zfinf" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-genus-differentia", @@ -60776,17 +61314,13 @@ "pred": "http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-genus-differentia", "val": "VSAO part_of NCBITaxon:7955" }, - { - "pred": "http://www.w3.org/2000/01/rdf-schema#comment", - "val": "SVN version: $Revision: 1.100$" - }, { "pred": "http://www.w3.org/2002/07/owl#versionInfo", - "val": "2022-03-15" + "val": "2022-12-09" } ], "subsets": [], - "version": "http://purl.obolibrary.org/obo/zfa/releases/2022-03-15/zfa-base.json", + "version": "http://purl.obolibrary.org/obo/zfa/releases/2022-12-09/zfa-base.json", "xrefs": [] }, "nodes": [ @@ -60834,6 +61368,62 @@ }, "type": "PROPERTY" }, + { + "id": "http://purl.obolibrary.org/obo/BFO_0000062", + "lbl": "preceded_by", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomical_ontology" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val": "preceded_by" + } + ], + "definition": { + "val": "X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X).", + "xrefs": [ + "goc:cjm" + ] + }, + "xrefs": [ + { + "val": "BFO:0000062" + } + ] + }, + "type": "PROPERTY" + }, + { + "id": "http://purl.obolibrary.org/obo/RO_0002087", + "lbl": "immediately_preceded_by", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomical_ontology" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val": "immediately_preceded_by" + } + ], + "definition": { + "val": "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y).", + "xrefs": [ + "goc:cjm" + ] + }, + "xrefs": [ + { + "val": "RO:0002087" + } + ] + }, + "type": "PROPERTY" + }, { "id": "http://purl.obolibrary.org/obo/RO_0002131", "lbl": "overlaps", @@ -66904,7 +67494,7 @@ }, { "pred": "hasExactSynonym", - "val": "corpus cerebelli granular layer ", + "val": "corpus cerebelli granular layer", "xrefs": [ "ZFIN:ZDB-PUB-961014-1280" ] @@ -69241,7 +69831,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -70121,7 +70711,7 @@ "synonyms": [ { "pred": "hasExactSynonym", - "val": "flexor caudalis dorsalis superioris ", + "val": "flexor caudalis dorsalis superioris", "xrefs": [] }, { @@ -71999,7 +72589,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -73628,7 +74218,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -74388,7 +74978,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -74983,7 +75573,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:JCN 421-:189-198" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -75267,7 +75857,7 @@ }, { "pred": "hasExactSynonym", - "val": "upper semilunar valve ", + "val": "upper semilunar valve", "xrefs": [ "ZFIN:ZDB-PUB-060921-12" ] @@ -75697,7 +76287,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -76765,7 +77355,7 @@ }, { "pred": "hasExactSynonym", - "val": " dilatator opercula", + "val": "dilatator opercula", "xrefs": [] }, { @@ -77246,7 +77836,7 @@ }, { "pred": "hasRelatedSynonym", - "val": "tuberculum impar of Herrick ", + "val": "tuberculum impar of Herrick", "xrefs": [] } ], @@ -77631,7 +78221,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -78466,7 +79056,7 @@ }, { "pred": "hasRelatedSynonym", - "val": "post-temporal ", + "val": "post-temporal", "xrefs": [] } ], @@ -79739,7 +80329,7 @@ }, { "pred": "hasExactSynonym", - "val": "octaval ganglion ", + "val": "octaval ganglion", "xrefs": [] }, { @@ -80060,7 +80650,7 @@ "synonyms": [ { "pred": "hasExactSynonym", - "val": "semicircular torus ", + "val": "semicircular torus", "xrefs": [] } ], @@ -80347,7 +80937,7 @@ }, { "pred": "hasExactSynonym", - "val": "transversus ventralis ", + "val": "transversus ventralis", "xrefs": [] } ], @@ -86673,7 +87263,7 @@ } ], "definition": { - "val": "Portion of somite 16 that gives rise to body wall muscle masses.", + "val": "Portion of somite 26 that gives rise to body wall muscle masses.", "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", @@ -90943,10 +91533,11 @@ } ], "definition": { - "val": "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", + "val": "One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", "xrefs": [ "GOC:ymb", - "ORCiD:0000-0002-9900-7880" + "ORCiD:0000-0002-9900-7880", + "ZFIN:ZDB-PUB-110811-14" ] }, "synonyms": [ @@ -90954,6 +91545,16 @@ "pred": "hasExactSynonym", "val": "pll", "xrefs": [] + }, + { + "pred": "hasRelatedSynonym", + "val": "midbody lateral line", + "xrefs": [] + }, + { + "pred": "hasRelatedSynonym", + "val": "midtrunk line", + "xrefs": [] } ], "xrefs": [ @@ -102237,7 +102838,7 @@ "pred": "hasRelatedSynonym", "val": "tunica muscularis", "xrefs": [ - "http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" + "http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" ] } ], @@ -118556,10 +119157,11 @@ } ], "definition": { - "val": "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", + "val": "One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", "xrefs": [ "GOC:ymb", - "ORCiD:0000-0002-9900-7880" + "ORCiD:0000-0002-9900-7880", + "ZFIN:ZDB-PUB-070907-34" ] }, "synonyms": [ @@ -119172,7 +119774,7 @@ "pred": "hasRelatedSynonym", "val": "tunica serosa", "xrefs": [ - "http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" + "http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" ] } ], @@ -141819,7 +142421,10 @@ "xrefs": [ "ZFIN:ZDB-PUB-120106-15" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -141883,7 +142488,10 @@ "ORCiD:0000-0002-2244-7917", "ZFIN:ZDB-PUB-060724-7" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -141978,6 +142586,9 @@ "GOC:tjm" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0002546" @@ -142039,6 +142650,9 @@ "CL:MAH" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0007011" @@ -142071,6 +142685,9 @@ "ISBN:0080923437" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011102" @@ -142103,6 +142720,9 @@ "ISBN:0080923437" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011103" @@ -142135,6 +142755,9 @@ "PMID:23848055" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -142318,6 +142941,9 @@ "ISBN:0721662544" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0000737" @@ -142387,7 +143013,10 @@ "ORCiD:0000-0002-2244-7917", "ZFIN:ZDB-PUB-961014-195" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -145101,7 +145730,10 @@ "ORCID:0000-0002-2244-7917", "ZFIN:ZDB-PUB-961014-594" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -145129,6 +145761,9 @@ "ZFIN:ZDB-PUB-961014-572" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -145392,7 +146027,10 @@ "ZFIN:ZDB-PUB-110110-13", "ZFIN:ZDB-PUB-150512-4" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -145536,6 +146174,9 @@ "ZFIN:ZDB-PUB-120718-30" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0000024" @@ -147756,7 +148397,7 @@ } ], "definition": { - "val": "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes .", + "val": "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes .", "xrefs": [ "GOC:cvs", "ORCID:0000-0002-1009-339X", @@ -147770,6 +148411,33 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005943", + "lbl": "perivitelline fluid", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-03-25T15:52:05Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance.", + "xrefs": [ + "ZFIN:ZDB-PUB-200910-2" + ] + } + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFA_0005944", "lbl": "mural cell", @@ -147807,6 +148475,470 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005945", + "lbl": "long double cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T09:06:25Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "red-sensitive cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasRelatedSynonym", + "val": "unequal double cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-961014-677" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005946", + "lbl": "short double cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T10:53:10Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "green-sensitive cone", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasRelatedSynonym", + "val": "unequal double cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-961014-677" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005947", + "lbl": "long single cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T11:01:04Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "blue-sensitive cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005948", + "lbl": "short single cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T11:10:25Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "UV-sensitive cone", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasExactSynonym", + "val": "ultraviolet-sensitive cone", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005949", + "lbl": "heart lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:47:35Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the heart.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005950", + "lbl": "bulbus arteriosus lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:53:55Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + }, + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "outflow tract lymph vessel", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005951", + "lbl": "cardiac ventricle lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:58:24Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005952", + "lbl": "heart lymphatic system", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:23:44Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymphatic system of the heart.", + "xrefs": [ + "GOC:CVS", + "ORCID:0000-0002-2244-7917" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005953", + "lbl": "coronary capillary plexus", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:26:17Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Capillary plexus that is located in the heart.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005954", + "lbl": "cardiac lymphatic endothelial cluster", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:30:04Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + }, + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "isolated lymph endothelial cells", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005955", + "lbl": "lymphatic endothelial cluster", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:53:02Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005956", + "lbl": "germline stem cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T13:44:39Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "A stem cell that can give rise to cell types of the germ-line.", + "xrefs": [ + "ORCID:0000-0002-4142-7153" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "xrefs": [ + { + "val": "CL:0000014" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005957", + "lbl": "stem cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T13:47:16Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.", + "xrefs": [ + "GOC:tfm" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "xrefs": [ + { + "val": "CL:0000034" + } + ] + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFA_0006000", "lbl": "intermediate hypothalamus", @@ -150560,6 +151692,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150629,6 +151764,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150725,6 +151863,9 @@ "CL:curator" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0002321" @@ -150758,6 +151899,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150794,6 +151938,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150891,6 +152038,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150927,6 +152077,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151665,6 +152818,9 @@ "ZFIN:ZDB-PUB-170409-2" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151711,6 +152867,9 @@ "ZFIN:ZDB-PUB-170409-2" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151761,6 +152920,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -151802,6 +152964,9 @@ "ZFIN:ZDB-PUB-190402-19" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151839,6 +153004,9 @@ "ZFIN:ZDB-PUB-190402-19" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -163120,7 +164288,7 @@ "definition": { "val": "A stem cell that can give rise to cell types of the body other than those of the germ-line.", "xrefs": [ - "GO:CJM" + "GO:cjm" ] }, "subsets": [ @@ -166652,6 +167820,9 @@ "GOC:nv" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011004" @@ -166738,7 +167909,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFA_0009404", - "lbl": "heart valve endothelial cells", + "lbl": "heart valve endothelial cell", "meta": { "basicPropertyValues": [ { @@ -166766,6 +167937,13 @@ "http://purl.obolibrary.org/obo/zfa#cell_slim" ], "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "heart valve endocardial cell", + "xrefs": [ + "ZFIN:ZDB-PUB-200221-32" + ] + }, { "pred": "hasRelatedSynonym", "val": "VEC", @@ -166792,7 +167970,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000000", - "lbl": "Unknown", + "lbl": "unknown", "meta": { "basicPropertyValues": [ { @@ -166813,7 +167991,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000001", - "lbl": "Zygote:1-cell", + "lbl": "zygote:1-cell", "meta": { "basicPropertyValues": [ { @@ -166834,7 +168012,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000002", - "lbl": "Cleavage:2-cell", + "lbl": "cleavage:2-cell", "meta": { "basicPropertyValues": [ { @@ -166855,7 +168033,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000003", - "lbl": "Cleavage:4-cell", + "lbl": "cleavage:4-cell", "meta": { "basicPropertyValues": [ { @@ -166876,7 +168054,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000004", - "lbl": "Cleavage:8-cell", + "lbl": "cleavage:8-cell", "meta": { "basicPropertyValues": [ { @@ -166897,7 +168075,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000005", - "lbl": "Cleavage:16-cell", + "lbl": "cleavage:16-cell", "meta": { "basicPropertyValues": [ { @@ -166918,7 +168096,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000006", - "lbl": "Cleavage:32-cell", + "lbl": "cleavage:32-cell", "meta": { "basicPropertyValues": [ { @@ -166939,7 +168117,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000007", - "lbl": "Cleavage:64-cell", + "lbl": "cleavage:64-cell", "meta": { "basicPropertyValues": [ { @@ -166960,7 +168138,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000008", - "lbl": "Blastula:128-cell", + "lbl": "blastula:128-cell", "meta": { "basicPropertyValues": [ { @@ -166981,7 +168159,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000009", - "lbl": "Blastula:256-cell", + "lbl": "blastula:256-cell", "meta": { "basicPropertyValues": [ { @@ -167002,7 +168180,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000010", - "lbl": "Blastula:512-cell", + "lbl": "blastula:512-cell", "meta": { "basicPropertyValues": [ { @@ -167023,7 +168201,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000011", - "lbl": "Blastula:1k-cell", + "lbl": "blastula:1k-cell", "meta": { "basicPropertyValues": [ { @@ -167044,7 +168222,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000012", - "lbl": "Blastula:High", + "lbl": "blastula:high", "meta": { "basicPropertyValues": [ { @@ -167065,7 +168243,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000013", - "lbl": "Blastula:Oblong", + "lbl": "blastula:oblong", "meta": { "basicPropertyValues": [ { @@ -167086,7 +168264,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000014", - "lbl": "Blastula:Sphere", + "lbl": "blastula:sphere", "meta": { "basicPropertyValues": [ { @@ -167107,7 +168285,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000015", - "lbl": "Blastula:Dome", + "lbl": "blastula:dome", "meta": { "basicPropertyValues": [ { @@ -167128,7 +168306,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000016", - "lbl": "Blastula:30%-epiboly", + "lbl": "blastula:30%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167149,7 +168327,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000017", - "lbl": "Gastrula:50%-epiboly", + "lbl": "gastrula:50%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167170,7 +168348,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000018", - "lbl": "Gastrula:Germ-ring", + "lbl": "gastrula:germ-ring", "meta": { "basicPropertyValues": [ { @@ -167191,7 +168369,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000019", - "lbl": "Gastrula:Shield", + "lbl": "gastrula:shield", "meta": { "basicPropertyValues": [ { @@ -167212,7 +168390,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000020", - "lbl": "Gastrula:75%-epiboly", + "lbl": "gastrula:75%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167233,7 +168411,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000021", - "lbl": "Gastrula:90%-epiboly", + "lbl": "gastrula:90%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167254,7 +168432,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000022", - "lbl": "Gastrula:Bud", + "lbl": "gastrula:bud", "meta": { "basicPropertyValues": [ { @@ -167275,7 +168453,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000023", - "lbl": "Segmentation:1-4 somites", + "lbl": "segmentation:1-4 somites", "meta": { "basicPropertyValues": [ { @@ -167296,7 +168474,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000024", - "lbl": "Segmentation:5-9 somites", + "lbl": "segmentation:5-9 somites", "meta": { "basicPropertyValues": [ { @@ -167317,7 +168495,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000025", - "lbl": "Segmentation:10-13 somites", + "lbl": "segmentation:10-13 somites", "meta": { "basicPropertyValues": [ { @@ -167338,7 +168516,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000026", - "lbl": "Segmentation:14-19 somites", + "lbl": "segmentation:14-19 somites", "meta": { "basicPropertyValues": [ { @@ -167359,7 +168537,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000027", - "lbl": "Segmentation:20-25 somites", + "lbl": "segmentation:20-25 somites", "meta": { "basicPropertyValues": [ { @@ -167380,7 +168558,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000028", - "lbl": "Segmentation:26+ somites", + "lbl": "segmentation:26+ somites", "meta": { "basicPropertyValues": [ { @@ -167401,7 +168579,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000029", - "lbl": "Pharyngula:Prim-5", + "lbl": "pharyngula:prim-5", "meta": { "basicPropertyValues": [ { @@ -167422,7 +168600,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000030", - "lbl": "Pharyngula:Prim-15", + "lbl": "pharyngula:prim-15", "meta": { "basicPropertyValues": [ { @@ -167443,7 +168621,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000031", - "lbl": "Pharyngula:Prim-25", + "lbl": "pharyngula:prim-25", "meta": { "basicPropertyValues": [ { @@ -167464,7 +168642,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000032", - "lbl": "Pharyngula:High-pec", + "lbl": "pharyngula:high-pec", "meta": { "basicPropertyValues": [ { @@ -167485,7 +168663,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000033", - "lbl": "Hatching:Long-pec", + "lbl": "hatching:long-pec", "meta": { "basicPropertyValues": [ { @@ -167506,7 +168684,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000034", - "lbl": "Hatching:Pec-fin", + "lbl": "hatching:pec-fin", "meta": { "basicPropertyValues": [ { @@ -167527,7 +168705,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000035", - "lbl": "Larval:Protruding-mouth", + "lbl": "larval:protruding-mouth", "meta": { "basicPropertyValues": [ { @@ -167548,7 +168726,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000036", - "lbl": "Larval:Day 4", + "lbl": "larval:day 4", "meta": { "basicPropertyValues": [ { @@ -167569,7 +168747,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000037", - "lbl": "Larval:Day 5", + "lbl": "larval:day 5", "meta": { "basicPropertyValues": [ { @@ -167590,7 +168768,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000038", - "lbl": "Larval:Day 6", + "lbl": "larval:day 6", "meta": { "basicPropertyValues": [ { @@ -167611,7 +168789,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000039", - "lbl": "Larval:Days 7-13", + "lbl": "larval:days 7-13", "meta": { "basicPropertyValues": [ { @@ -167632,7 +168810,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000040", - "lbl": "Larval:Days 14-20", + "lbl": "larval:days 14-20", "meta": { "basicPropertyValues": [ { @@ -167653,7 +168831,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000041", - "lbl": "Larval:Days 21-29", + "lbl": "larval:days 21-29", "meta": { "basicPropertyValues": [ { @@ -167674,7 +168852,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000042", - "lbl": "Juvenile:Days 30-44", + "lbl": "juvenile:days 30-44", "meta": { "basicPropertyValues": [ { @@ -167695,7 +168873,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000043", - "lbl": "Juvenile:Days 45-89", + "lbl": "juvenile:days 45-89", "meta": { "basicPropertyValues": [ { @@ -167716,7 +168894,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000044", - "lbl": "Adult", + "lbl": "adult", "meta": { "basicPropertyValues": [ { @@ -167735,9 +168913,121 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000045", + "lbl": "blastula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000046", + "lbl": "cleavage", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000047", + "lbl": "gastrula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000048", + "lbl": "larva", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000049", + "lbl": "segmentation", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000050", + "lbl": "pharyngula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000051", + "lbl": "juvenile", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0007000", + "lbl": "hatching", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "yvonne" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2014-11-05T08:33:09Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFS_0100000", - "lbl": "Stages", + "lbl": "zebrafish stage", "meta": { "basicPropertyValues": [ { diff --git a/zfa-base.obo b/zfa-base.obo index 76ba1a3..cdea983 100644 --- a/zfa-base.obo +++ b/zfa-base.obo @@ -1,8 +1,8 @@ format-version: 1.2 -data-version: zfa/releases/2022-03-15/zfa-base.owl -date: 08:03:2021 11:16 -saved-by: ceriv -auto-generated-by: OBO-Edit 2.3.1 +data-version: zfa/releases/2022-12-09/zfa-base.owl +date: 29:11:2022 16:29 +saved-by: zfinf +auto-generated-by: OBO-Edit 2.3-beta5 subsetdef: cell_slim "cell_slim" synonymtypedef: PLURAL "PLURAL" default-namespace: zebrafish_anatomical_ontology @@ -10,13 +10,14 @@ treat-xrefs-as-genus-differentia: CARO part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: CL part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: TAO part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: VSAO part_of NCBITaxon:7955 -remark: SVN version: $Revision: 1.100$ ontology: zfa/zfa-base property_value: http://purl.org/dc/elements/1.1/description "ZFA description." xsd:string property_value: http://purl.org/dc/elements/1.1/title "Zebrafish Anatomy Ontology (ZFA)" xsd:string property_value: http://purl.org/dc/elements/1.1/type IAO:8000001 property_value: http://purl.org/dc/terms/license https://creativecommons.org/licenses/by/3.0/ -property_value: owl:versionInfo "2022-03-15" xsd:string +property_value: IAO:0000700 ZFA:0100000 +property_value: IAO:0000700 ZFS:0100000 +property_value: owl:versionInfo "2022-12-09" xsd:string [Term] id: ZFA:0000000 @@ -25,8 +26,8 @@ namespace: zebrafish_anatomy def: "The visible division between epiblast and hypoblast in the gastrula." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000000 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000001 @@ -37,9 +38,9 @@ synonym: "ciliated organ of asymmetry" EXACT [ZFIN:ZDB-PUB-050221-4] xref: TAO:0000001 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000023 ! forerunner cell group -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000077 ! tail bud -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000003 @@ -51,9 +52,9 @@ synonym: "adaxial cells" EXACT PLURAL [] xref: CL:0007016 xref: TAO:0000003 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000279 ! segmental plate -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000004 @@ -63,9 +64,9 @@ def: "Anterior portion of the axial hypoblast." [GOC:cvs, GOC:ymb, ORCiD:0000-00 synonym: "pre-polster" EXACT [ZFIN:ZDB-PUB-051019-5] xref: TAO:0000004 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001378 ! axial hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000005 @@ -75,9 +76,9 @@ def: "Blood vessels that carry blood away from the heart." [GOC:cvs, ORCiD:0000- synonym: "arterial system" RELATED [] xref: TAO:0000005 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000006 @@ -87,9 +88,9 @@ def: "The anterior round region of the yolk cell present after the yolk extensio synonym: "yolk ball" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000006 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000084 ! yolk -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000007 @@ -98,9 +99,9 @@ namespace: zebrafish_anatomy def: "A complex mixture of cells suspended in a liquid matrix that delivers nutrients to cells and removes wastes." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000007 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000008 @@ -112,9 +113,9 @@ synonym: "brain structure" RELATED [] xref: TAO:0000008 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001135 ! neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000009 @@ -125,9 +126,9 @@ synonym: "ventricle" EXACT [] xref: TAO:0000009 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001719 ! presumptive cardiac ventricle heart tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000010 @@ -136,8 +137,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that functions in circulation and has as its parts the heart and vasculature. The lymphatic system is considered part of the cardiovascular system." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000010 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000011 @@ -147,10 +148,10 @@ def: "Extension of the dorsal aorta in the post-vent region." [GOC:cvs, ORCiD:00 synonym: "CA" EXACT [] xref: TAO:0000011 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000012 @@ -161,8 +162,8 @@ synonym: "cns" EXACT [] xref: TAO:0000012 is_a: ZFA:0000396 ! nervous system relationship: develops_from ZFA:0000063 ! presumptive neural plate -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000013 @@ -173,8 +174,8 @@ synonym: "cranial ganglia" EXACT PLURAL [] synonym: "presumptive cranial ganglia" RELATED [] xref: TAO:0000013 is_a: ZFA:0000190 ! ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000014 @@ -186,10 +187,10 @@ synonym: "dorsal aortic root" EXACT [] xref: TAO:0000014 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005077 ! vascular cord -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000015 @@ -206,8 +207,8 @@ def: "The outer layer of the embryo derived from the epiblast. The definitive ec xref: TAO:0000016 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0000018 ! epiblast -relationship: end ZFS:0000038 ! Larval:Day 6 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000038 ! larval:day 6 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000017 @@ -216,8 +217,8 @@ namespace: zebrafish_anatomy xref: TAO:0000017 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0000416 ! presumptive endoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000035 ! larval:protruding-mouth +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000018 @@ -227,9 +228,9 @@ def: "The outer of the two layers of the blastoderm that form during gastrulatio xref: TAO:0000018 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000019 @@ -241,11 +242,11 @@ synonym: "pineal gland" EXACT [] synonym: "pineal organ" EXACT [] xref: TAO:0000019 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001127 ! visual system relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000020 @@ -256,8 +257,8 @@ synonym: "extraembryonic structures" EXACT PLURAL [] xref: CARO:0000042 xref: TAO:0000020 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000022 @@ -270,9 +271,9 @@ synonym: "fp" EXACT [] xref: TAO:0000022 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001218 ! presumptive floor plate -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000023 @@ -285,8 +286,8 @@ synonym: "forerunner cells" EXACT PLURAL [] xref: TAO:0000023 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001126 ! noninvoluting endocytic marginal cell cluster -relationship: end ZFS:0000023 ! Segmentation:1-4 somites -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000023 ! segmentation:1-4 somites +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0000024 @@ -296,9 +297,9 @@ def: "Layer of the retina that contains the ganglion cell bodies." [GOC:mh, ORCi synonym: "ganglion cell layer" EXACT [] xref: TAO:0000024 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000026 @@ -309,8 +310,8 @@ synonym: "hgg" EXACT [] xref: TAO:0000026 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000058 ! polster -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000027 @@ -320,9 +321,9 @@ def: "Skeletal system of paired fins." [GOC:mh, ORCiD:0000-0001-9114-8737] synonym: "appendicular skeleton" EXACT [] xref: TAO:0000027 is_a: ZFA:0000434 ! skeletal system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005596 ! paired fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000028 @@ -334,9 +335,9 @@ synonym: "heart primordia" EXACT PLURAL [] xref: TAO:0000028 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001065 ! lateral mesoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000029 @@ -347,9 +348,9 @@ synonym: "rhombencephalon" EXACT [] xref: TAO:0000029 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007043 ! hindbrain neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000030 @@ -360,9 +361,9 @@ synonym: "maculae utricle" EXACT PLURAL [] xref: TAO:0000030 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000168 ! anterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000700 ! utricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000031 @@ -372,9 +373,9 @@ def: "Portion of tissue that arises from the arise from the lateral edges of the xref: TAO:0000031 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001217 ! presumptive hypochord -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000017 ! endoderm -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000032 @@ -383,9 +384,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure which is the largest portion of diencephalon and is ventrally located. The hypothalamus arises near the end of the segmentation period and the embryonic hypothalamic region gives rise to the neurohypophysis and other diencephalic nuclei." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000032 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000033 @@ -398,9 +399,9 @@ xref: TAO:0000033 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000121 ! lateral plate mesoderm relationship: develops_from ZFA:0001201 ! ventral lateral mesoderm -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000034 @@ -410,9 +411,9 @@ def: "A sensory system on the surface of the fish, consisting of small sensory p synonym: "ll" EXACT [] xref: TAO:0000034 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000035 @@ -423,9 +424,9 @@ synonym: "lenses" EXACT PLURAL [] xref: TAO:0000035 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001679 ! solid lens vesicle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000036 @@ -434,8 +435,8 @@ namespace: zebrafish_anatomy def: "System responsible for the production and movement of bile." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000036 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000037 @@ -446,8 +447,8 @@ synonym: "anatomical structures" EXACT PLURAL [] xref: CARO:0000003 xref: TAO:0000037 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000038 @@ -456,8 +457,8 @@ namespace: zebrafish_anatomy def: "Embryonic structure, the edge of the blastoderm." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000038 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000039 @@ -465,8 +466,8 @@ name: median axial vein namespace: zebrafish_anatomy xref: TAO:0000039 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000040 @@ -476,8 +477,8 @@ def: "Surface structure that will develop into one of the median fins. Extends synonym: "median fin" RELATED [] xref: TAO:0000040 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000041 @@ -486,8 +487,8 @@ namespace: zebrafish_anatomy xref: TAO:0000041 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000042 @@ -500,9 +501,9 @@ synonym: "midbrain-hindbrain boundary" EXACT [] xref: TAO:0000042 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007047 ! midbrain hindbrain boundary neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000043 @@ -513,9 +514,9 @@ subset: cell_slim synonym: "muscle pioneers somite 1" EXACT PLURAL [] xref: TAO:0000043 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000072 ! somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000044 @@ -525,9 +526,9 @@ def: "Portion of somite 14 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000044 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000045 @@ -537,8 +538,8 @@ def: "A cell population arising from the dorsolateral aspect of the central nerv xref: TAO:0000045 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007082 ! neural plate border -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000046 @@ -550,9 +551,9 @@ synonym: "neuroretina" EXACT [] xref: TAO:0000046 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001071 ! presumptive neural retina -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000047 @@ -564,9 +565,9 @@ synonym: "nose" RELATED [] xref: TAO:0000047 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000048 ! olfactory placode -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000048 @@ -577,9 +578,9 @@ synonym: "olfactory placodes" EXACT PLURAL [] xref: TAO:0000048 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007062 ! olfactory field -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000049 @@ -589,9 +590,9 @@ def: "Lumen of optic stalk." [ZFIN:ZDB-PUB-101008-1] synonym: "optic recesses" EXACT PLURAL [] xref: TAO:0000049 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000050 @@ -602,9 +603,9 @@ synonym: "optic vesicles" EXACT PLURAL [] xref: TAO:0000050 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000570 ! optic primordium -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000051 @@ -617,8 +618,8 @@ synonym: "ov" EXACT [] xref: TAO:0000051 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000138 ! otic placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000052 @@ -628,9 +629,9 @@ def: "Actinotrichium which is part of the dorsal fin fold." [GOC:cvs, ORCiD:0000 synonym: "dorsal actinotrichia" EXACT PLURAL [] xref: TAO:0000052 is_a: ZFA:0000089 ! fin fold actinotrichium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000102 ! dorsal fin fold -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000053 @@ -640,9 +641,9 @@ def: "Embryonic structure part of the mesoderm fated to become segmental plate." synonym: "presumptive segmental plates" EXACT PLURAL [] xref: TAO:0000053 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000054 @@ -652,9 +653,9 @@ def: "Serous membrane that surrounds the heart." [GOC:cvs, ORCiD:0000-0002-2244- synonym: "pericardial sac" EXACT [] xref: TAO:0000054 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000056 @@ -663,9 +664,9 @@ namespace: zebrafish_anatomy def: "Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000056 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000058 @@ -676,9 +677,9 @@ synonym: "pillow" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000058 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000004 ! anterior axial hypoblast -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000060 ! prechordal plate -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000059 @@ -689,8 +690,8 @@ synonym: "post optic commissure" EXACT [] synonym: "post-optic commissure" EXACT [] xref: TAO:0000059 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000060 @@ -699,9 +700,9 @@ namespace: zebrafish_anatomy def: "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000060 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001204 ! axial mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000062 @@ -711,10 +712,10 @@ def: "Embryonic structure that gives rise to the forebrain." [GOC:mh, ORCiD:0000 synonym: "presumptive prosencephalon" EXACT [] xref: TAO:0000062 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000063 @@ -728,8 +729,8 @@ synonym: "prospective neuroectoderm" EXACT [] synonym: "prospective vegetal ectoderm" EXACT [] xref: TAO:0000063 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000021 ! gastrula:90%-epiboly +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000064 @@ -740,9 +741,9 @@ synonym: "outer layer optic cup" EXACT [] synonym: "presumptive pigmented epithelia" EXACT PLURAL [] xref: TAO:0000064 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000066 @@ -752,9 +753,9 @@ def: "An inward fold on the surface of the embryonic ectoderm that develops into synonym: "anus" RELATED [] xref: TAO:0000066 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000067 @@ -764,9 +765,9 @@ def: "Intermediate mesoderm that is located beneath the anterior somites and giv synonym: "pronephric primordium" EXACT [ZFIN:ZDB-PUB-000606-4] xref: TAO:0000067 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0001206 ! intermediate mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000068 @@ -776,9 +777,9 @@ def: "Cluster of cells in the neural plate that have the potential to become neu synonym: "proneural clusters" EXACT PLURAL [] xref: TAO:0000068 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000069 @@ -789,8 +790,8 @@ synonym: "r6" EXACT [] xref: TAO:0000069 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001210 ! presumptive rhombomere 6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000070 @@ -811,9 +812,9 @@ synonym: "Spemann Mangold organizer" EXACT [] synonym: "Spemann's organizer" EXACT [] xref: TAO:0000071 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000072 @@ -822,8 +823,8 @@ namespace: zebrafish_anatomy def: "Anteriormost undifferentiated mesodermal component of early trunk segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000072 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000073 @@ -832,8 +833,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 5 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000073 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000074 @@ -842,8 +843,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 26 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000074 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000075 @@ -855,9 +856,9 @@ synonym: "spinal cord structure" RELATED [] xref: TAO:0000075 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0007042 ! spinal cord neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000076 @@ -868,9 +869,9 @@ synonym: "gas bladder" EXACT [] xref: TAO:0000076 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005335 ! swim bladder bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000077 @@ -881,8 +882,8 @@ synonym: "tailbud" EXACT [] xref: TAO:0000077 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000078 @@ -892,9 +893,9 @@ def: "Actinotrichium which is part of the ventral fin fold." [GOC:mh, ORCiD:0000 synonym: "ventral actinotrichia" EXACT PLURAL [] xref: TAO:0000078 is_a: ZFA:0000089 ! fin fold actinotrichium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001069 ! ventral fin fold -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000079 @@ -904,9 +905,9 @@ def: "The anterior and dorsal forebrain neuromere. In ray-finned fishes and most xref: TAO:0000079 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000571 ! presumptive telencephalon -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000080 @@ -915,8 +916,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the trigeminal ganglion." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000080 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000081 @@ -924,8 +925,8 @@ name: trunk mesenchyme namespace: zebrafish_anatomy xref: TAO:0000081 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000082 @@ -935,9 +936,9 @@ def: "Vessels that carry blood to the heart." [GOC:cvs, ORCiD:0000-0002-2244-791 synonym: "venous system" RELATED [] xref: TAO:0000082 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000083 @@ -945,8 +946,8 @@ name: ventral mesoderm namespace: zebrafish_anatomy xref: TAO:0000083 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000084 @@ -959,8 +960,8 @@ synonym: "yolk cell" EXACT [] xref: CL:0000428 xref: TAO:0000084 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000085 @@ -976,9 +977,9 @@ synonym: "apical fold pectoral fin" EXACT [] xref: TAO:0000085 xref: TAO:0000736 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000086 @@ -989,9 +990,9 @@ synonym: "enveloping layer" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000086 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001484 ! superficial blastomere -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000088 @@ -1005,8 +1006,8 @@ xref: TAO:0000088 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000084 ! yolk relationship: develops_from ZFA:0000541 ! marginal blastomere -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000011 ! Blastula:1k-cell +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000011 ! blastula:1k-cell [Term] id: ZFA:0000089 @@ -1017,9 +1018,9 @@ synonym: "fin fold actinotrichia" EXACT PLURAL [] synonym: "median fin fold actinotrichium" EXACT [] xref: TAO:0000089 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000090 @@ -1028,9 +1029,9 @@ namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000090 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000091 @@ -1044,9 +1045,9 @@ synonym: "presumptive notochord" EXACT [] xref: TAO:0000091 xref: TAO:0001219 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001204 ! axial mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000092 @@ -1056,8 +1057,8 @@ def: "Organism subdivision running along the rostral-caudal axis of the early em synonym: "midline" EXACT [] xref: TAO:0000092 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0000093 @@ -1068,9 +1069,9 @@ subset: cell_slim synonym: "blastomeres" EXACT PLURAL [] xref: TAO:0000093 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000015 ! Blastula:Dome +relationship: end ZFS:0000015 ! blastula:dome relationship: part_of ZFA:0001175 ! blastodisc -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000094 @@ -1083,9 +1084,9 @@ synonym: "posterior blood island" RELATED [] synonym: "posterior ICM" EXACT [] xref: TAO:0000094 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000033 ! intermediate cell mass of mesoderm -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000095 @@ -1096,10 +1097,10 @@ synonym: "branchial arch skeleton" EXACT [] synonym: "gill arches 1-5 skeleton" EXACT [] xref: TAO:0000095 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000096 @@ -1108,8 +1109,8 @@ namespace: zebrafish_anatomy def: "Blood vasculature comprised of the cardinal veins." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000096 is_a: ZFA:0001079 ! blood vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000097 @@ -1118,8 +1119,8 @@ namespace: zebrafish_anatomy def: "Artery originating at the junction of the first two aortic arches and supplying the anterior brain." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000097 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000098 @@ -1131,8 +1132,8 @@ synonym: "cell division" RELATED [] synonym: "proliferation" RELATED [] xref: TAO:0000098 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000012 ! Blastula:High +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0000099 @@ -1141,9 +1142,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the brain." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000099 is_a: ZFA:0001267 ! cranial vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000100 @@ -1153,9 +1154,9 @@ def: "Brain structure derived from the anterior hindbrain, and perhaps including xref: TAO:0000100 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001442 ! upper rhombic lip -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000101 @@ -1165,9 +1166,9 @@ def: "The more posterior and ventral of two forebrain neuromeres, the other bein xref: TAO:0000101 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000574 ! presumptive diencephalon -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000102 @@ -1176,9 +1177,9 @@ namespace: zebrafish_anatomy def: "Region of the median fin fold that develops into the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000102 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000103 @@ -1231,9 +1232,9 @@ def: "A cellular, multilayered epithelium derived from the ectoderm. Zebrafish e xref: TAO:0000105 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000016 ! ectoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000106 @@ -1243,9 +1244,9 @@ def: "The posterior elongated region of the yolk cell that forms during the segm synonym: "yolk extension" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000106 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000084 ! yolk -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000107 @@ -1256,10 +1257,10 @@ synonym: "eyes" EXACT PLURAL [] xref: TAO:0000107 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001678 ! immature eye -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head relationship: part_of ZFA:0001127 ! visual system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000108 @@ -1269,8 +1270,8 @@ def: "Surface structure involved in locomotion." [TAO:WD] synonym: "fins" EXACT PLURAL [] xref: TAO:0000108 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000109 @@ -1281,9 +1282,9 @@ synonym: "prosencephalon" EXACT [] xref: TAO:0000109 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007041 ! forebrain neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000110 @@ -1298,10 +1299,10 @@ synonym: "ventricle IV" EXACT [] synonym: "ventriculus rhombencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000110 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000111 @@ -1311,8 +1312,8 @@ def: "Embryonic structure that forms as a thickened annulus at the blastoderm ri xref: TAO:0000111 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000112 @@ -1325,9 +1326,9 @@ synonym: "gut tube" EXACT [] xref: TAO:0000112 is_a: ZFA:0001512 ! anatomical group relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000113 @@ -1336,8 +1337,8 @@ namespace: zebrafish_anatomy def: "Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head." [http://www.Biology-Text.com] xref: TAO:0000113 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000114 @@ -1347,10 +1348,10 @@ def: "Blood pumping organ composed of four components: sinus venosus, atrium, ca xref: TAO:0000114 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000360 ! heart tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000115 @@ -1362,9 +1363,9 @@ synonym: "rudimentary heart" EXACT [] xref: TAO:0000115 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000028 ! heart primordium -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000116 @@ -1375,9 +1376,9 @@ synonym: "maculae lagena" EXACT PLURAL [] xref: TAO:0000116 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000374 ! lagena -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000117 @@ -1388,9 +1389,9 @@ synonym: "mesendoderm" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000117 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000118 @@ -1400,10 +1401,10 @@ def: "A compound organ which is an endocrine gland located ventral to the dience synonym: "pituitary" EXACT [] xref: TAO:0000118 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000119 @@ -1414,9 +1415,9 @@ synonym: "inner nuclear layer" EXACT PLURAL [] synonym: "intermediate cell layer" EXACT [] xref: TAO:0000119 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000120 @@ -1427,9 +1428,9 @@ synonym: "lateral line ganglia" EXACT PLURAL [] synonym: "llg" EXACT [] xref: TAO:0000120 is_a: ZFA:0000013 ! cranial ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000121 @@ -1439,8 +1440,8 @@ synonym: "lateral plate" EXACT [] synonym: "LPM" EXACT [] xref: TAO:0000121 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000122 @@ -1450,10 +1451,10 @@ def: "Ectodermal primordium of the lens of the eye." [ZFIN:ZDB-PUB-961014-576] synonym: "lens placodes" EXACT PLURAL [] xref: TAO:0000122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000016 ! ectoderm relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000123 @@ -1463,10 +1464,10 @@ def: "Solid compound organ with three lobes that has many functions including bi xref: TAO:0000123 is_a: ZFA:0001491 ! solid compound organ relationship: develops_from ZFA:0000124 ! liver primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000124 @@ -1477,9 +1478,9 @@ synonym: "liver bud" EXACT [] xref: TAO:0000124 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000125 @@ -1490,9 +1491,9 @@ synonym: "neuromast mandibular" EXACT [] synonym: "neuromasts mandibular" EXACT PLURAL [] xref: TAO:0000125 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000259 ! mandibular lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000126 @@ -1502,9 +1503,9 @@ def: "Centra are represented by mineralized, calcified, or ossified portions tha synonym: "autocentrum" EXACT [] xref: TAO:0000126 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001189 ! vertebra -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000127 @@ -1521,9 +1522,9 @@ synonym: "mesencephalon" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000128 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007039 ! midbrain neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000130 @@ -1535,9 +1536,9 @@ synonym: "nasal pit" EXACT [] synonym: "olfactory cavity" EXACT [] xref: TAO:0000130 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000131 @@ -1548,8 +1549,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000131 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000132 ! neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000025 ! segmentation:10-13 somites +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000132 @@ -1560,8 +1561,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000132 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000063 ! presumptive neural plate -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000133 @@ -1572,8 +1573,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000133 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000131 ! neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000135 @@ -1584,8 +1585,8 @@ synonym: "notocord" EXACT [] xref: TAO:0000135 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000091 ! axial chorda mesoderm -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000136 @@ -1596,9 +1597,9 @@ synonym: "neuromast otic" EXACT [] synonym: "neuromasts otic" EXACT PLURAL [] xref: TAO:0000136 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000464 ! otic lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000137 @@ -1609,9 +1610,9 @@ synonym: "optic stalks" EXACT PLURAL [] xref: TAO:0000137 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007031 ! anterior neural rod -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000138 @@ -1620,9 +1621,9 @@ namespace: zebrafish_anatomy def: "Primordium of the ear epithelium before it hollows into the otic vesicle, present beside the hindbrain rudiment in the mid-segmentation period. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000138 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000140 @@ -1632,10 +1633,10 @@ def: "The pancreas is an organ composed of endocrine and exocrine glandular tiss xref: TAO:0000140 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001390 ! pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000141 @@ -1646,8 +1647,8 @@ synonym: "pectoral fin buds" EXACT PLURAL [] xref: TAO:0000141 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001453 ! pectoral fin field -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000142 @@ -1657,8 +1658,8 @@ def: "Nervous structures including ganglia outside of the central nervous system synonym: "pns" EXACT [] xref: TAO:0000142 is_a: ZFA:0000396 ! nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000143 @@ -1668,9 +1669,9 @@ def: "The layer within the retina where the photoreceptor cell receptor segments synonym: "retinal photoreceptor layers" EXACT PLURAL [] xref: TAO:0000143 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000144 @@ -1685,9 +1686,9 @@ synonym: "RPE" EXACT [] xref: TAO:0000144 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000064 ! presumptive retinal pigmented epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000146 @@ -1697,9 +1698,9 @@ def: "Embryonic structure that gives rise to the brain." [GOC:mh, ORCiD:0000-000 synonym: "brain rudiment" EXACT [] xref: TAO:0000146 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000148 @@ -1709,10 +1710,10 @@ def: "Embryonic structure that gives rise to the midbrain." [GOC:mh, ORCiD:0000- synonym: "presumptive mesencephalon" EXACT [] xref: TAO:0000148 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000149 @@ -1722,10 +1723,10 @@ def: "Multi-tissue structure that arises from the heart rudiment and will become xref: TAO:0000149 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000115 ! heart rudiment -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000150 @@ -1736,9 +1737,9 @@ synonym: "pronephric ducts" EXACT PLURAL [] xref: TAO:0000150 is_a: ZFA:0005171 ! duct relationship: develops_from ZFA:0000067 ! pronephric mesoderm -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000151 @@ -1750,10 +1751,10 @@ synonym: "pronephric nephron" EXACT [] xref: TAO:0000151 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000067 ! pronephric mesoderm -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000152 @@ -1764,9 +1765,9 @@ synonym: "retinas" EXACT PLURAL [] xref: TAO:0000152 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001202 ! optic cup -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000153 @@ -1777,8 +1778,8 @@ synonym: "r8" EXACT [] xref: TAO:0000153 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001214 ! presumptive rhombomere 8 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000154 @@ -1789,9 +1790,9 @@ synonym: "inflow tract" EXACT [] xref: TAO:0000154 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001722 ! presumptive sinus venosus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000155 @@ -1802,9 +1803,9 @@ synonym: "somitic mesoderm" RELATED [] xref: TAO:0000155 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000279 ! segmental plate -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000156 @@ -1813,8 +1814,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 20 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000156 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000157 @@ -1823,8 +1824,8 @@ namespace: zebrafish_anatomy def: "Posteriormost undifferentiated mesodermal component of early tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000157 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000158 @@ -1838,9 +1839,9 @@ xref: TAO:0000158 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001581 ! ural centrum 2 relationship: develops_from ZFA:0001583 ! preural centrum 1+ ural centrum 1 -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000159 @@ -1854,10 +1855,10 @@ synonym: "midbrain ventricle" EXACT [] synonym: "ventriculus mesencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000159 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000160 @@ -1870,10 +1871,10 @@ synonym: "midbrain tegmentum" EXACT [] xref: TAO:0000160 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000761 ! basal plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000161 @@ -1887,10 +1888,10 @@ synonym: "ventriculus diencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000161 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001259 ! forebrain ventricle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000162 @@ -1900,8 +1901,8 @@ def: "The ectodermal rudiment of the trigeminal ganglion, distinguishable during synonym: "trigeminal placodes" EXACT PLURAL [] xref: TAO:0000162 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000163 @@ -1911,8 +1912,8 @@ def: "System that removes and collects metabolic waste from the blood while main synonym: "urinary system" RELATED [] xref: TAO:0000163 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000164 @@ -1920,8 +1921,8 @@ name: ventral mesenchyme namespace: zebrafish_anatomy xref: TAO:0000164 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000165 @@ -1934,9 +1935,9 @@ synonym: "lateral lobe of hypothalamus" EXACT [] synonym: "lobus inferior hypothalami" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000165 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000347 ! dorsal hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000166 @@ -1953,9 +1954,9 @@ synonym: "medial crista" RELATED [ZFIN:ZDB-PUB-051116-3] xref: TAO:0000166 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000225 ! lateral crista primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000167 @@ -1964,9 +1965,9 @@ namespace: zebrafish_anatomy def: "Median fin skeleton that is located posterior to the anus." [TAO:curator] xref: TAO:0000167 is_a: ZFA:0001123 ! axial fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001162 ! anal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000168 @@ -1977,9 +1978,9 @@ synonym: "am" EXACT [] synonym: "anterior sensory patch" EXACT [] xref: TAO:0000168 is_a: ZFA:0000386 ! macula -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001671 ! macula communis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000169 @@ -1997,9 +1998,9 @@ synonym: "basibranchials" EXACT PLURAL [] xref: TAO:0000170 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001220 ! copula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000171 @@ -2016,10 +2017,10 @@ def: "Muscle that is part of pharyngeal arches 3-7 which are also known as the b synonym: "branchial muscles" EXACT PLURAL [] xref: TAO:0000172 is_a: ZFA:0001652 ! head muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000173 @@ -2032,9 +2033,9 @@ synonym: "truncus" EXACT [] xref: TAO:0000173 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001712 ! presumptive bulbus arteriosus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000174 @@ -2046,9 +2047,9 @@ synonym: "caudal cerebellar tracts" EXACT PLURAL [] synonym: "cerebellovestibular tracts" EXACT PLURAL [] xref: TAO:0000174 is_a: ZFA:0001708 ! cerebellar white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000175 @@ -2059,9 +2060,9 @@ synonym: "caudal lateral line nerve" EXACT [] xref: TAO:0000175 is_a: ZFA:0000641 ! cranial nerve is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000176 @@ -2072,8 +2073,8 @@ synonym: "area ventralis telencephali, nucleus lateralis" EXACT [] xref: TAO:0002204 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon relationship: develops_from ZFA:0005911 ! presumptive lateral nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000177 @@ -2082,8 +2083,8 @@ namespace: zebrafish_anatomy synonym: "caudal obliques" EXACT PLURAL [] xref: TAO:0000177 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000178 @@ -2092,9 +2093,9 @@ namespace: zebrafish_anatomy def: "Portion of the fish's body that is posterior to the vent and anterior to the caudal fin." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000178 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000179 @@ -2104,10 +2105,10 @@ def: "Cranial nerve root which is part of the abducens nerve (CN-VI) and is loca synonym: "radix caudalis nervi abducentis" EXACT [] xref: TAO:0000179 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000310 ! cranial nerve VI relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000180 @@ -2118,10 +2119,10 @@ synonym: "CV" EXACT [] xref: TAO:0000180 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0001286 ! caudal vein plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000181 @@ -2134,9 +2135,9 @@ synonym: "Dp" EXACT [ZFIN:ZDB-PUB-150226-6] synonym: "posterior zone of dorsal telencephalic area" EXACT [] xref: TAO:0000181 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000182 @@ -2147,9 +2148,9 @@ synonym: "central posterior thalamic nucleus" EXACT [] synonym: "nucleus centralis posterior thalami" EXACT [] xref: TAO:0000182 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000653 ! dorsal thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000183 @@ -2159,9 +2160,9 @@ def: "Multi-tissue structure that is the central part of the pretectum." [GOC:mh xref: TAO:0000183 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005908 ! presumptive pretectum proliferative zone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000418 ! pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000184 @@ -2171,9 +2172,9 @@ def: "Transversely oriented bone connecting the occipital region of the skull do synonym: "cleithra" EXACT PLURAL [] xref: TAO:0000184 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000185 @@ -2183,8 +2184,8 @@ def: "Anterior commissure which abuts the preoptic region dorsally. From Neuroan synonym: "commissura anterior, pars ventralis" EXACT [] xref: TAO:0000185 is_a: ZFA:0001108 ! anterior commissure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000186 @@ -2194,10 +2195,10 @@ def: "Bilaterally paired longitudinal vein; the anterior cardinal returns blood synonym: "duct of Cuvier" EXACT [] xref: TAO:0000186 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000188 @@ -2205,13 +2206,13 @@ name: corpus cerebelli namespace: zebrafish_anatomy def: "Brain structure which is one of three parts of the cerebellum and is the entry point for a posterior cerebellar tract that carries cerebellar afferents from many brain stem nuclei. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] synonym: "cerebellar corpus" EXACT [] -synonym: "corpus cerebelli granular layer " EXACT [ZFIN:ZDB-PUB-961014-1280] +synonym: "corpus cerebelli granular layer" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "corpus cerebellum" EXACT PLURAL [] xref: TAO:0000188 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000189 @@ -2221,9 +2222,9 @@ def: "Anatomical cluster of skeletal elements that is a posterolateral part of t synonym: "cranial vault" RELATED [] xref: TAO:0000189 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000190 @@ -2233,9 +2234,9 @@ def: "Structures containing a collection of nerve cell bodies." [GOC:mh, ORCiD:0 synonym: "ganglia" EXACT PLURAL [] xref: TAO:0000190 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000191 @@ -2245,11 +2246,11 @@ def: "Dermal bone that forms the antero-lateral part of the lower jaw. It first synonym: "dentary bone" EXACT [] xref: TAO:0000191 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005488 ! mandibular symphysis relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000192 @@ -2259,9 +2260,9 @@ def: "The bundle of the sensory root of the trigeminal nerve that descends in th synonym: "radix descendens nervi trigemini" EXACT [] xref: TAO:0000192 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000193 @@ -2272,9 +2273,9 @@ synonym: "diffuse nuclei" EXACT PLURAL [] synonym: "DIL" EXACT [] xref: TAO:0000193 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000165 ! inferior lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000194 @@ -2284,9 +2285,9 @@ def: "Diencephalic nucleus that is part of the central pretectum and is ventral synonym: "nucleus opticus accessorius dorsalis" EXACT [] xref: TAO:0000194 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000195 @@ -2297,9 +2298,9 @@ synonym: "depressor dorsalis" EXACT [] synonym: "dorsal depressors" EXACT PLURAL [] xref: TAO:0000195 is_a: ZFA:0005270 ! depressor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000196 @@ -2309,11 +2310,11 @@ def: "The dorsal hypohyal is a small cartilage replacement bone ossifying from t synonym: "dorsal hypohyals" EXACT PLURAL [] xref: TAO:0000196 is_a: ZFA:0001381 ! hypohyal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005457 ! dorsal hypohyal-urohyal joint relationship: overlaps ZFA:0005458 ! dorsal hypohyal-ventral hypohyal joint relationship: overlaps ZFA:0005467 ! ceratohyal-dorsal hypohyal joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000197 @@ -2324,9 +2325,9 @@ synonym: "dorsal habenular nuclei" EXACT PLURAL [] synonym: "dorsal nuclei" EXACT PLURAL [] xref: TAO:0000197 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000213 ! habenula -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000199 @@ -2335,9 +2336,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the dorsal hypothalamic zone and is located periventricularly. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000199 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000347 ! dorsal hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000200 @@ -2349,8 +2350,8 @@ synonym: "DRG" EXACT [] xref: TAO:0000200 is_a: ZFA:0001573 ! trunk ganglion relationship: develops_from ZFA:0001024 ! trunk neural crest -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000201 @@ -2358,8 +2359,8 @@ name: dorsal transverse namespace: zebrafish_anatomy xref: TAO:0000201 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000202 @@ -2370,10 +2371,10 @@ synonym: "EBA" EXACT [] xref: TAO:0000202 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000203 @@ -2391,9 +2392,9 @@ synonym: "oesophagus" EXACT [] xref: TAO:0000204 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000205 @@ -2405,9 +2406,9 @@ synonym: "lateralis superficialis ventralis" EXACT [] synonym: "LSV" RELATED [] xref: TAO:0000205 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000206 @@ -2419,9 +2420,9 @@ synonym: "nucleus motorius nervi facialis" EXACT [] synonym: "nVII" EXACT [] xref: TAO:0000206 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000207 @@ -2430,8 +2431,8 @@ namespace: zebrafish_anatomy def: "Musculature part of fin." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000207 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000208 @@ -2440,11 +2441,11 @@ namespace: zebrafish_anatomy def: "The compound organ that stores bile." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000208 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000209 @@ -2454,8 +2455,8 @@ def: "Preglomerular nucleus which is located between the rostral and medial preg synonym: "lateral preglomerular nuclei" EXACT PLURAL [] xref: TAO:0000209 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000210 @@ -2465,9 +2466,9 @@ def: "Portion of tissue that is the caudal gigantocellular portion of the magnoc synonym: "nucleus praeopticus magnocellularis, pars gigantocellularis" EXACT [] xref: TAO:0000210 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000248 ! magnocellular preoptic nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000211 @@ -2477,9 +2478,9 @@ def: "Multi-tissue structure that is the transverse vertical platelet on the gil synonym: "gill lamellae" EXACT PLURAL [] xref: TAO:0000211 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000212 @@ -2492,9 +2493,9 @@ synonym: "eminentia granularis" EXACT [] synonym: "lateral granular eminence" EXACT [] xref: TAO:0000212 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000307 ! vestibulolateralis lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000213 @@ -2505,9 +2506,9 @@ synonym: "habenulae" EXACT PLURAL [] synonym: "habenular nucleus" EXACT [] xref: TAO:0000213 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000214 @@ -2526,9 +2527,9 @@ namespace: zebrafish_anatomy def: "Hindbrain nucleus where climbing fibers originate. The neurons in the inferior olive are capable of prolonged oscillatory activity. The inferior olive is called a precerebellar nucleus since virtually all of the efferent axons terminate in the cerebellum." [GOC:mh, ISBN:0471888893, ORCiD:0000-0001-9114-8737] xref: TAO:0000215 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000216 @@ -2537,9 +2538,9 @@ namespace: zebrafish_anatomy comment: This may need to be treated as a waypoint in the development of the various muscles or as a group of muscles. xref: TAO:0000216 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000217 @@ -2552,9 +2553,9 @@ synonym: "otocyst" RELATED [] xref: TAO:0000217 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0000051 ! otic vesicle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000219 @@ -2563,9 +2564,9 @@ namespace: zebrafish_anatomy synonym: "intermediate reticular formations" EXACT PLURAL [] xref: TAO:0000219 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000542 ! medial column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000220 @@ -2578,8 +2579,8 @@ synonym: "lateral semicircular canals" EXACT PLURAL [] synonym: "lateral semicircular duct" EXACT [] xref: TAO:0000220 is_a: ZFA:0000431 ! semicircular canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000221 @@ -2588,8 +2589,8 @@ namespace: zebrafish_anatomy synonym: "internal levators" EXACT PLURAL [] xref: TAO:0000221 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000222 @@ -2600,8 +2601,8 @@ synonym: "isthmic primary nuclei" EXACT PLURAL [] synonym: "isthmic primary sensory trigeminal nucleus" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000222 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000223 @@ -2613,9 +2614,9 @@ synonym: "lacrimal" EXACT [] synonym: "lacrymal bone" EXACT [] xref: TAO:0000223 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000224 @@ -2638,9 +2639,9 @@ def: "Is an otic epithelium that will mature into the lateral crista." [GOC:ymb, synonym: "lateral crista primordia" EXACT PLURAL [] xref: TAO:0000225 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000226 @@ -2651,12 +2652,12 @@ synonym: "lateral ethmoids" EXACT PLURAL [] xref: TAO:0000226 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001503 ! lamina orbitonasalis -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005420 ! autopalatine-lateral ethmoid joint relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000227 @@ -2668,9 +2669,9 @@ synonym: "lateral hypothalamic nuclei" EXACT PLURAL [] synonym: "lateral tuberal nucleus" EXACT [] xref: TAO:0000227 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000228 @@ -2681,9 +2682,9 @@ synonym: "lateral line primordia" EXACT PLURAL [] synonym: "llp" EXACT [] xref: TAO:0000228 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000229 @@ -2693,8 +2694,8 @@ def: "Telencephalic white matter which extends between the olfactory bulb and th synonym: "tractus olfactorius lateralis" EXACT [] xref: TAO:0000229 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000230 @@ -2704,9 +2705,9 @@ def: "Muscle that attaches to the parhypurpophyses. The muscle inserts on the up synonym: "hypochordal longitudinalis" EXACT [] xref: TAO:0000230 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000628 ! caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000231 @@ -2720,9 +2721,9 @@ synonym: "recessus lateralis" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000231 xref: TAO:0001799 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000232 @@ -2733,8 +2734,8 @@ synonym: "lateral semicircular canal primordia" RELATED PLURAL [] synonym: "lateral semicircular canal primordium" RELATED [] xref: TAO:0000232 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000233 @@ -2748,9 +2749,9 @@ synonym: "lower semilunar valve" EXACT [ZFIN:ZDB-PUB-060921-12] synonym: "mandibular valve" EXACT [] xref: TAO:0000233 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000234 @@ -2761,9 +2762,9 @@ synonym: "maculae neglecta" EXACT PLURAL [] xref: TAO:0000234 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000235 @@ -2773,9 +2774,9 @@ def: "Diencephalic nucleus that is part of the superficial pretectum and is caud synonym: "magnocellular superficial pretectal nuclei" EXACT PLURAL [] xref: TAO:0000235 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000687 ! superficial pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000236 @@ -2785,10 +2786,10 @@ def: "Muscle that are part of the mandibular arch (pharyngeal arch 1)." [GOC:cv synonym: "mandibular muscles" EXACT PLURAL [] xref: TAO:0000236 is_a: ZFA:0001652 ! head muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001612 ! pharyngeal arch 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000237 @@ -2797,9 +2798,9 @@ namespace: zebrafish_anatomy synonym: "medial forebrain bundles diencephalon" EXACT PLURAL [] xref: TAO:0000237 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005111 ! medial forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000238 @@ -2809,8 +2810,8 @@ def: "Telencephalic white matter which extends between the olfactory bulb and th synonym: "tractus olfactorius medialis" EXACT [] xref: TAO:0000238 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000239 @@ -2821,9 +2822,9 @@ synonym: "mesocoracoid bones" EXACT PLURAL [] xref: TAO:0000239 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001537 ! mesocoracoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000240 @@ -2834,12 +2835,12 @@ synonym: "metapterygoids" EXACT PLURAL [] xref: TAO:0000240 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0005902 ! pterygoid process -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005469 ! hyomandibula-metapterygoid joint relationship: overlaps ZFA:0005486 ! quadrate-metapterygoid joint relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000241 @@ -2847,9 +2848,9 @@ name: midline column namespace: zebrafish_anatomy xref: TAO:0000241 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000421 ! reticular formation -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000242 @@ -2859,8 +2860,8 @@ def: "Gonochoristic organism that can produce male gametes." [GOC:mh, ORCiD:0000 xref: CARO:0000027 xref: TAO:0000242 is_a: ZFA:0001094 ! whole organism -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000243 @@ -2873,9 +2874,9 @@ synonym: "neuromasts" EXACT PLURAL [] xref: TAO:0000243 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0005227 ! protoneuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000244 @@ -2884,9 +2885,9 @@ namespace: zebrafish_anatomy synonym: "Edinger-Westphal nucleus" EXACT [] xref: TAO:0000244 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000245 @@ -2896,8 +2897,8 @@ def: "Sensory trigeminal nucleus that lies at the mediodorsal edge of the descen synonym: "sensory nucleus of the descending trigeminal root" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000245 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000246 @@ -2906,9 +2907,9 @@ namespace: zebrafish_anatomy def: "Telencephalic nucleus which is located immediately ventral to the caudal zone of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000246 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000247 @@ -2921,8 +2922,8 @@ synonym: "octaval nerve" EXACT [] synonym: "statoacoustic nerve" EXACT [] xref: TAO:0000247 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000248 @@ -2932,9 +2933,9 @@ def: "Diencephalic nucleus that is dorsal to the caudal parvocellular preoptic n synonym: "magnocellular preoptic nuclei" EXACT PLURAL [] xref: TAO:0000248 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000249 @@ -2944,9 +2945,9 @@ synonym: "CN-I" EXACT [] synonym: "olfactory nerve" EXACT [] xref: TAO:0000249 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000250 @@ -2956,12 +2957,12 @@ def: "Dermal bone that articulates anteriorly with the hyomandibula. The opercle synonym: "opercles" EXACT PLURAL [] xref: TAO:0000250 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005885 ! operculohyoid ligament relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000251 @@ -2980,8 +2981,8 @@ synonym: "optic tracts" EXACT PLURAL [] synonym: "tractus opticus" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000252 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000253 @@ -2992,12 +2993,12 @@ synonym: "orbitosphenoids" EXACT PLURAL [] xref: TAO:0000253 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001505 ! taenia marginalis anterior -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000254 @@ -3008,9 +3009,9 @@ comment: During normal development, the exocrine anlage arises from bilateral se synonym: "pancreatic anlage" EXACT [ZFIN:ZDB-PUB-050623-3] xref: TAO:0000254 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000255 @@ -3023,8 +3024,8 @@ xref: TAO:0000255 is_a: ZFA:0000041 ! mesoderm is_a: ZFA:0000081 ! trunk mesenchyme relationship: develops_from ZFA:0000591 ! presumptive paraxial mesoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000256 @@ -3033,9 +3034,9 @@ namespace: zebrafish_anatomy synonym: "pars subcommissuralis of V" EXACT [] xref: TAO:0000256 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000304 ! ventral telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000257 @@ -3045,9 +3046,9 @@ def: "Cartilage which is part of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-22 synonym: "pectoral fin cartilages" EXACT PLURAL [] xref: TAO:0000257 is_a: ZFA:0001543 ! paired fin cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000258 @@ -3057,22 +3058,22 @@ def: "Musculature that is part of the pelvic fin." [GOC:mh, ORCiD:0000-0001-9114 xref: TAO:0000258 is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001449 ! mesenchyme pelvic fin -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000259 name: mandibular lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "mandibular lateral lines" EXACT PLURAL [] synonym: "mandibular line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000259 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000260 @@ -3083,9 +3084,9 @@ synonym: "periventricular nuclei" EXACT PLURAL [] synonym: "ventral zone of periventricular hypothalamus" EXACT [] xref: TAO:0000260 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000261 @@ -3093,8 +3094,8 @@ name: pharyngohyoid namespace: zebrafish_anatomy xref: TAO:0000261 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000262 @@ -3107,8 +3108,8 @@ synonym: "posterior semicircular canals" EXACT PLURAL [] synonym: "posterior semicircular duct" EXACT [] xref: TAO:0000262 is_a: ZFA:0000431 ! semicircular canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000263 @@ -3120,9 +3121,9 @@ synonym: "precaudal vertebrae" EXACT PLURAL [] synonym: "trunk vertebra" RELATED [] xref: TAO:0000263 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000264 @@ -3132,11 +3133,11 @@ def: "Dermal bone that is part of the opercular flap and bears the preopercular synonym: "preopercles" EXACT PLURAL [] xref: TAO:0000264 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000265 @@ -3145,8 +3146,8 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become dorsal mesoderm. Determined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000265 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000266 @@ -3158,8 +3159,8 @@ synonym: "pretectomamillary tract" EXACT [] synonym: "TPp" RELATED [] xref: TAO:0000266 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000267 @@ -3170,9 +3171,9 @@ synonym: "olfactory nerve layer" EXACT [ZFIN:ZDB-PUB-050523-2] synonym: "stratum nervosum bulbi olfactorii" EXACT [] xref: TAO:0000267 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000268 @@ -3182,9 +3183,9 @@ def: "Rod-like internal median skeletal support bones of the anal fin, which art synonym: "anal fin proximal radials" EXACT PLURAL [] xref: TAO:0000268 is_a: ZFA:0001646 ! anal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001420 ! anal fin pterygiophore -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000269 @@ -3196,9 +3197,9 @@ synonym: "flexor caudalis ventralis inferioris" EXACT [] synonym: "inferior ventral flexor" EXACT [] xref: TAO:0000269 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000270 @@ -3208,11 +3209,11 @@ def: "The dermal maxilla forms part of the upper jaw. It is first visible as a s synonym: "maxillae" EXACT PLURAL [] xref: TAO:0000270 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005421 ! autopalatine-maxillary joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000271 @@ -3222,8 +3223,8 @@ def: "The internal skeletal supports of the median and paired fins." [TAO:curat synonym: "radials" EXACT PLURAL [] xref: TAO:0000271 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000272 @@ -3232,8 +3233,8 @@ namespace: zebrafish_anatomy def: "System responsible for the exchange of gases across the gill membranes." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000272 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000274 @@ -3244,8 +3245,8 @@ synonym: "anterior octaval nucleus" EXACT [] synonym: "nucleus octavus anterior" EXACT [] xref: TAO:0000274 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000275 @@ -3253,9 +3254,9 @@ name: rostral tegmental nucleus namespace: zebrafish_anatomy xref: TAO:0000275 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000276 @@ -3263,9 +3264,9 @@ name: rostrolateral thalamic nucleus of Butler & Saidel namespace: zebrafish_anatomy xref: TAO:0000276 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000277 @@ -3276,9 +3277,9 @@ synonym: "scales" EXACT PLURAL [] xref: TAO:0000277 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001704 ! scale primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001183 ! dermal superficial region -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000278 @@ -3286,10 +3287,10 @@ name: secondary gustatory nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000278 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000279 @@ -3300,9 +3301,9 @@ synonym: "presomitic mesoderm" EXACT [] synonym: "PSM" EXACT [] xref: TAO:0000279 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000255 ! paraxial mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000280 @@ -3313,9 +3314,9 @@ synonym: "medial division" EXACT [] synonym: "valvula cerebelli, pars medialis" EXACT [] xref: TAO:0000280 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000281 @@ -3327,9 +3328,9 @@ synonym: "sensory hair cells posterior macula" EXACT PLURAL [] xref: TAO:0000281 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001099 ! immature hair cell posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000558 ! posterior macula -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000282 @@ -3339,9 +3340,9 @@ def: "Nervous system responsible for transmitting sensory stimuli." [GOC:mh, ORC synonym: "sensory systems" EXACT PLURAL [] xref: TAO:0000282 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000284 @@ -3351,11 +3352,11 @@ def: "Dermal bone lying below the opercle. The subopercle is a paired bone." [GO synonym: "subopercles" EXACT PLURAL [] xref: TAO:0000284 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000285 @@ -3367,9 +3368,9 @@ synonym: "superficial adductors" EXACT PLURAL [] xref: TAO:0000285 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000286 @@ -3380,9 +3381,9 @@ synonym: "lateral superficial muscle" RELATED [] synonym: "lateralis superficialis" EXACT [] xref: TAO:0000286 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000287 @@ -3390,13 +3391,13 @@ name: superior caudal dorsal flexor namespace: zebrafish_anatomy def: "Paired, deep caudal fin muscles that originate from the 30th vertebra and extend toward the dorsal base of the caudal fin where they insert broadly on fin rays." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] synonym: "CDS" RELATED [] -synonym: "flexor caudalis dorsalis superioris " EXACT [] +synonym: "flexor caudalis dorsalis superioris" EXACT [] synonym: "superior dorsal flexor" EXACT [] xref: TAO:0000287 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000288 @@ -3404,9 +3405,9 @@ name: supracarinalis namespace: zebrafish_anatomy xref: TAO:0000288 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000289 @@ -3422,9 +3423,9 @@ namespace: zebrafish_anatomy def: "Anatomical cluster that forms the floor and sidewalls of the middle part of the cranium." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000290 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000291 @@ -3436,9 +3437,9 @@ synonym: "medial octavolateralis nuclei" EXACT PLURAL [] synonym: "MON" RELATED [] xref: TAO:0000291 is_a: ZFA:0000381 ! lateral line sensory nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000292 @@ -3448,8 +3449,8 @@ def: "Organism subdivision which is the collection of anatomical structures on t synonym: "surface structures" EXACT PLURAL [] xref: TAO:0000292 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000293 @@ -3458,9 +3459,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is located between the dorsal diencephalon and the mesencephalon and contains the caudal commissure. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000293 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000294 @@ -3470,9 +3471,9 @@ def: "Diencephalic nucleus which is part of the caudal tuberculum. In goldfish synonym: "lateral torus" EXACT [] xref: TAO:0000294 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000295 @@ -3487,8 +3488,8 @@ xref: TAO:0000295 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000080 ! trigeminal neural crest relationship: develops_from ZFA:0000162 ! trigeminal placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000296 @@ -3496,8 +3497,8 @@ name: uncrossed tecto-bulbar tract namespace: zebrafish_anatomy xref: TAO:0000296 is_a: ZFA:0000446 ! tecto-bulbar tract -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000297 @@ -3506,9 +3507,9 @@ namespace: zebrafish_anatomy def: "The multi-tissue, vagal lobe is a large, paired brain stem structure flanking the unpaired facial lobe laterally. The vagal lobe contains motor and gustatory neurons. While some degree of histological segregation is apparent within the vagal lobe, a clear lamination, as seen in goldfish or carp is absent." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-1280] synonym: "LX" EXACT [ZFIN:ZDB-PUB-961014-1280] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000298 @@ -3520,9 +3521,9 @@ synonym: "cloacal vent" EXACT [] xref: TAO:0000298 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0000066 ! proctodeum -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000299 @@ -3538,8 +3539,8 @@ synonym: "ventral entopeduncular nucleus V" EXACT [] xref: TAO:0000299 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon relationship: develops_from ZFA:0005910 ! presumptive ventral entopeduncular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000300 @@ -3550,11 +3551,11 @@ synonym: "lower hypohyal" EXACT [] synonym: "ventrohyal" EXACT [] xref: TAO:0000300 is_a: ZFA:0001381 ! hypohyal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005458 ! dorsal hypohyal-ventral hypohyal joint relationship: overlaps ZFA:0005466 ! ceratohyal-ventral hypohyal joint relationship: overlaps ZFA:0005476 ! inter-ventral hypohyal joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000301 @@ -3565,9 +3566,9 @@ comment: Mature form at Hatching:Long-pec. synonym: "medial recti" EXACT PLURAL [] xref: TAO:0000301 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000302 @@ -3576,9 +3577,9 @@ namespace: zebrafish_anatomy def: "Habenular nucleus positioned ventromedially to the dorsal habenular nuclei. The ventral habenular nuclei are paired and symmetrical, each have a conical shape defined by a wide rostral end, occupying the entire anterior region of the habenula, and a narrow caudal end. The axons of the ventral habenular nucleus passed laterally through the interpeduncular nucleus and projected to the ventral part of the median raphe. The ventral habenular nucleus is homolog mammalian lateral habenular nucleus." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100202-7, ZFIN:ZDB-PUB-120709-5] xref: TAO:0000302 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000213 ! habenula -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000303 @@ -3588,8 +3589,8 @@ def: "Gonochoristic organism that can produce female gametes." [GOC:mh, ORCiD:00 xref: CARO:0000028 xref: TAO:0000303 is_a: ZFA:0001094 ! whole organism -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000304 @@ -3600,9 +3601,9 @@ synonym: "area ventralis telencephali" EXACT [] synonym: "subpallium" EXACT [] xref: TAO:0000304 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000305 @@ -3612,9 +3613,9 @@ def: "Groove that separates the paired inferior (or lateral) lobes of the hypoth synonym: "hypothalamic sulcus" RELATED [] xref: TAO:0000305 is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000306 @@ -3622,9 +3623,9 @@ name: ventrolateral thalamic nucleus namespace: zebrafish_anatomy xref: TAO:0000306 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000307 @@ -3633,9 +3634,9 @@ namespace: zebrafish_anatomy def: "Brain structure which is part of the cerebellum consists of the paired granular eminentia and the medial caudal lobe. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000307 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000308 @@ -3645,11 +3646,11 @@ def: "A thin medial unpaired dermal bone that is kite or paddle-shape. Underlyin synonym: "vomer" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0000308 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000309 @@ -3659,9 +3660,9 @@ def: "The portion of the YSL that is outside of the blastoderm margin during epi synonym: "E-YSL" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000309 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000013 ! Blastula:Oblong +relationship: start ZFS:0000013 ! blastula:oblong [Term] id: ZFA:0000310 @@ -3673,8 +3674,8 @@ synonym: "CN-VI" EXACT [] synonym: "nervus abducens" EXACT [] xref: TAO:0000310 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000311 @@ -3684,8 +3685,8 @@ def: "Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. xref: TAO:0000311 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0007049 ! adductor mandibulae -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000312 @@ -3695,8 +3696,8 @@ def: "Sensory trigeminal nucleus located at the tectal ventricle near the synenc synonym: "mesencephalic nuclei of trigeminal nerves" EXACT PLURAL [] xref: TAO:0000312 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000313 @@ -3707,9 +3708,9 @@ synonym: "anal inclinators" EXACT PLURAL [] synonym: "inclinatores anales" EXACT [ZFIN:ZDB-PUB-171118-8] xref: TAO:0000313 is_a: ZFA:0005276 ! inclinator muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000314 @@ -3722,8 +3723,8 @@ synonym: "anterior semicircular duct" EXACT [] synonym: "rostral vertical semicircular canal" EXACT [] xref: TAO:0000314 is_a: ZFA:0000431 ! semicircular canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000315 @@ -3734,9 +3735,9 @@ synonym: "lagenar otolith" EXACT [] synonym: "lagenolith" EXACT [] xref: TAO:0000315 is_a: ZFA:0001617 ! otolith -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000374 ! lagena -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000316 @@ -3749,9 +3750,9 @@ synonym: "glossohyal" EXACT [] xref: TAO:0000316 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001510 ! basihyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000317 @@ -3762,8 +3763,8 @@ synonym: "axial skeleton" EXACT [] xref: TAO:0000317 is_a: ZFA:0000434 ! skeletal system relationship: develops_from ZFA:0001080 ! sclerotome -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000318 @@ -3774,9 +3775,9 @@ synonym: "brain stem and spinal tract/commissure" EXACT [] synonym: "brain stem/spinal tracts and commissures" EXACT PLURAL [] xref: TAO:0000318 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000319 @@ -3786,9 +3787,9 @@ def: "The portion of tissue forming the membrane connecting the branchiostegals synonym: "branchiostegal membranes" EXACT PLURAL [] xref: TAO:0000319 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000320 @@ -3799,9 +3800,9 @@ synonym: "PC" RELATED [] synonym: "posterior commissure" EXACT [] xref: TAO:0000320 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000321 @@ -3810,8 +3811,8 @@ namespace: zebrafish_anatomy synonym: "caudal levators" EXACT PLURAL [] xref: TAO:0000321 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000322 @@ -3820,8 +3821,8 @@ namespace: zebrafish_anatomy synonym: "caudal octaval nuclei" EXACT PLURAL [] xref: TAO:0000322 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000323 @@ -3833,11 +3834,11 @@ xref: TAO:0000323 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001321 ! neurocranial trabecula relationship: develops_from ZFA:0001405 ! ethmoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000324 @@ -3848,9 +3849,9 @@ synonym: "caudal zone of periventricular hypothalamus" EXACT [] synonym: "nucleus periventricularis hypothalami, zona caudalis" EXACT [] xref: TAO:0000324 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000634 ! caudal hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000325 @@ -3860,9 +3861,9 @@ def: "Diencephalic nucleus which is part of the caudal tuberculum. It is target synonym: "posterior thalamic nucleus" EXACT [] xref: TAO:0000325 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000326 @@ -3872,8 +3873,8 @@ def: "Vertebra bearing a hemal arch and spine. The most posterior caudal vertebr synonym: "caudal vertebrae" EXACT PLURAL [] xref: TAO:0000326 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000327 @@ -3881,9 +3882,9 @@ name: central zone of the optic tectum namespace: zebrafish_anatomy xref: TAO:0000327 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000328 @@ -3893,8 +3894,8 @@ def: "Musculature system of the pharyngeal and head regions." [GOC:cvs, ORCiD:00 synonym: "head muscles" RELATED [] xref: TAO:0000328 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000329 @@ -3903,8 +3904,8 @@ namespace: zebrafish_anatomy def: "The egg shell." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000329 is_a: ZFA:0000020 ! extraembryonic structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000330 @@ -3914,9 +3915,9 @@ def: "Space proximal to the urogenital pore where the pronephric duct, intestine synonym: "cloaca lumen" EXACT [] xref: TAO:0000330 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000331 @@ -3926,8 +3927,8 @@ synonym: "commissura infima Halleri" EXACT [] synonym: "commissura infima of Haller" EXACT [] xref: TAO:0000331 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000332 @@ -3939,10 +3940,10 @@ synonym: "scapulocoracoid" RELATED [] xref: TAO:0000332 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005470 ! inter-coracoid joint relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000333 @@ -3950,9 +3951,9 @@ name: mesovarium namespace: zebrafish_anatomy xref: TAO:0000333 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000403 ! ovary -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000334 @@ -3962,9 +3963,9 @@ def: "Brain structure which is located ventrolaterally to the caudal preglomerul synonym: "mammillary body" EXACT [] xref: TAO:0000334 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000335 @@ -3973,8 +3974,8 @@ namespace: zebrafish_anatomy synonym: "tractus tectobulbaris cruciatus" EXACT [] xref: TAO:0000335 is_a: ZFA:0000446 ! tecto-bulbar tract -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000336 @@ -3998,9 +3999,9 @@ def: "CNS white matter that is part of the diencephalon." [GOC:mh, ORCiD:0000-00 synonym: "diencephalic tract/commissure" EXACT [] xref: TAO:0000338 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000339 @@ -4009,8 +4010,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that processes ingested substances." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000339 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000340 @@ -4023,8 +4024,8 @@ synonym: "entopeduncular nucleus, dorsal part" EXACT [] synonym: "nucleus entopeduncularis, pars dorsalis" EXACT [] xref: TAO:0000340 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000341 @@ -4037,9 +4038,9 @@ synonym: "dorsal flexors" EXACT PLURAL [] synonym: "flexor caudalis dorsalis inferioris" EXACT [] xref: TAO:0000341 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000342 @@ -4050,9 +4051,9 @@ synonym: "dorsal inclinators" EXACT PLURAL [] synonym: "inclinator dorsalis" EXACT [] xref: TAO:0000342 is_a: ZFA:0005276 ! inclinator muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000343 @@ -4065,22 +4066,22 @@ synonym: "dorsal nucleus of V" EXACT [] synonym: "Vd" RELATED [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000343 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000344 name: middle lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "middle lateral lines" EXACT PLURAL [] xref: TAO:0000344 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005118 ! middle lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000345 @@ -4092,9 +4093,9 @@ synonym: "dorsal recti" EXACT PLURAL [] synonym: "superior rectus" EXACT [ZFIN:ZDB-PUB-110512-18] xref: TAO:0000345 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000346 @@ -4105,9 +4106,9 @@ synonym: "DTN" RELATED [] synonym: "nucleus tegmentalis dorsalis" EXACT [] xref: TAO:0000346 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000347 @@ -4117,9 +4118,9 @@ def: "Brain structure which is the dorsal most region of the hypothalamus and ex xref: TAO:0000347 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0006000 ! intermediate hypothalamus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000348 @@ -4134,9 +4135,9 @@ namespace: zebrafish_anatomy def: "Skeletal muscle that is the dorsal-most component of the body musculature. The anterior region attaches to the back of the cranial vault and the dorsal region of the pectoral girdle. The epaxialis is bound to the skin by fibrous connective tissue and internally it inserts over the dorsal portion of the vertebral centra and fin pterygiophores and the neural spines. Posteriorly the epaxialis overlies the modified muscle of the caudal fin and inserts onto the dorsal ray bases of the fin. The anterior epaxial plays a role in feeding and the posterior region is central to locomotion." [GOC:cvs, ISBN:0125296509, ORCiD:0000-0002-2244-7917] xref: TAO:0000349 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000350 @@ -4146,8 +4147,8 @@ def: "Epipleurals lie below the horizontal septum and are posteroventrally direc synonym: "epipleurals" EXACT PLURAL [] xref: TAO:0000350 is_a: ZFA:0000526 ! intermuscular bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000351 @@ -4157,9 +4158,9 @@ def: "Anatomical cluster that is located in the anterior region of the cranium a synonym: "ethmoid region" EXACT [] xref: TAO:0000351 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000352 @@ -4169,9 +4170,9 @@ def: "Portion of tissue which is located between the glomerular layer and intern synonym: "stratum cellulare externum bulbi olfactorii" EXACT [] xref: TAO:0000352 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000353 @@ -4184,8 +4185,8 @@ synonym: "habenulointerpeduncular tract" EXACT [] synonym: "tractus habenulo-interpeduncularis" EXACT [] xref: TAO:0000353 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000354 @@ -4196,9 +4197,9 @@ synonym: "gills" EXACT PLURAL [] xref: TAO:0000354 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001107 ! internal gill bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000272 ! respiratory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000355 @@ -4207,9 +4208,9 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the midbrain." [GOC:CVS, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000355 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000356 @@ -4219,9 +4220,9 @@ def: "Dermal bone that is a small anterior projection present on all of pharynge synonym: "gill rakers" EXACT PLURAL [] xref: TAO:0000356 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000357 @@ -4231,9 +4232,9 @@ def: "Multi-tissue structure which is located in between the primary olfactory f synonym: "stratum glomerulosum bulbi olfactorii" EXACT [] xref: TAO:0000357 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000358 @@ -4242,9 +4243,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is the innermost layer of the corpus cerebelli and consists of small granule cells and larger Golgi cells. The granule cell receive excitatory input from the mossy fibers, and send parallel fibers to the molecular layer where they synapse with Purkinje cell dendrites." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000358 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000359 @@ -4253,8 +4254,8 @@ namespace: zebrafish_anatomy synonym: "commissura habenularum" EXACT [] xref: TAO:0000359 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000360 @@ -4264,10 +4265,10 @@ def: "Cavitated compound organ that will become the adult heart following loopin xref: TAO:0000360 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000149 ! primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000362 @@ -4276,9 +4277,9 @@ namespace: zebrafish_anatomy def: "The hypaxialis consists of that part of the body musculature lying ventral to the midlateral horizontal septum." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-151106-17] xref: TAO:0000362 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000363 @@ -4289,9 +4290,9 @@ synonym: "hypobranchial bones" EXACT PLURAL [] xref: TAO:0000363 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000364 @@ -4303,8 +4304,8 @@ synonym: "hypuralia" EXACT [] synonym: "hypurals" EXACT PLURAL [] xref: TAO:0000364 is_a: ZFA:0000859 ! specialized hemal arch and spine -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000365 @@ -4314,10 +4315,10 @@ def: "Paired dermal bones, likened to a bone tube, positioned lateral to the sup synonym: "nasal bones" EXACT PLURAL [] xref: TAO:0000365 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000366 @@ -4327,9 +4328,9 @@ def: "Hindbrain nucleus that provides descending innervation to the brainstem an synonym: "posterior raphe nucleus" EXACT [] xref: TAO:0000366 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001429 ! raphe nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000367 @@ -4346,8 +4347,8 @@ def: "The outer protective barrier that separates the animal from its aquatic en synonym: "skin" EXACT [] xref: TAO:0000368 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000369 @@ -4357,8 +4358,8 @@ def: "Is a mandibular muscle that develops into the ventral intermandibularis an synonym: "intermandibular muscle" RELATED [ZFIN:ZDB-PUB-060921-12] xref: TAO:0000369 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000370 @@ -4367,9 +4368,9 @@ namespace: zebrafish_anatomy synonym: "intermediate thalamic nuclei" EXACT PLURAL [] xref: TAO:0000370 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000371 @@ -4378,8 +4379,8 @@ namespace: zebrafish_anatomy synonym: "internal pharyngoclavicularae" EXACT PLURAL [] xref: TAO:0000371 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000372 @@ -4387,9 +4388,9 @@ name: interpeduncular nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000372 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000373 @@ -4407,10 +4408,10 @@ def: "Otolith organ comprised of the macula lagena and asteriscus. The lagena i synonym: "lagenas" EXACT PLURAL [] xref: TAO:0000374 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005410 ! pars inferior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000375 @@ -4429,10 +4430,10 @@ alt_id: ZFA:0000489 def: "Dermal bone that is situated under or posterior to the eye and associated with the infraorbital sensory canal." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000376 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000379 @@ -4442,9 +4443,9 @@ def: "Portion of the lateral forebrain bundle that lies in the diencephalon." [G synonym: "lateral forebrain bundles diencephalon" EXACT PLURAL [] xref: TAO:0000379 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007012 ! lateral forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000380 @@ -4453,9 +4454,9 @@ namespace: zebrafish_anatomy synonym: "lateral lemniscus nuclei" EXACT PLURAL [] xref: TAO:0000380 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000381 @@ -4464,9 +4465,9 @@ namespace: zebrafish_anatomy synonym: "lateral line sensory nuclei" EXACT PLURAL [] xref: TAO:0000381 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000382 @@ -4477,8 +4478,8 @@ synonym: "acellular anatomical structures" EXACT PLURAL [] xref: CARO:0000040 xref: TAO:0000382 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000383 @@ -4490,9 +4491,9 @@ synonym: "lateral recti" EXACT PLURAL [] synonym: "posterior rectus" EXACT [ZFIN:ZDB-PUB-970121-6] xref: TAO:0000383 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000384 @@ -4503,8 +4504,8 @@ synonym: "levators arcus palatini" EXACT PLURAL [] xref: TAO:0000384 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000385 @@ -4513,9 +4514,9 @@ namespace: zebrafish_anatomy def: "The lymphatic system consists of blind-ended vessels, fluid and macromolecules collected from interstitial tissue space that serve as a conduit for the development and transport of lymphoid cells." [ZFIN:ZDB-PUB-130322-28] xref: TAO:0000385 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000386 @@ -4527,9 +4528,9 @@ synonym: "sensory macula" EXACT [] synonym: "sensory patch" EXACT [] xref: TAO:0000386 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000387 @@ -4542,9 +4543,9 @@ synonym: "nucleus motorius of nervi vagi" EXACT [] synonym: "nX" EXACT [] synonym: "vagal lobe" RELATED [] is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000297 ! vagal lobe -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000388 @@ -4555,9 +4556,9 @@ synonym: "caudal lobe of cerebellum" EXACT [] synonym: "lobus caudalis cerebelli" EXACT [] xref: TAO:0000388 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000307 ! vestibulolateralis lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000389 @@ -4565,9 +4566,9 @@ name: medial funicular nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000389 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000390 @@ -4577,8 +4578,8 @@ def: "Preglomerular nucleus which is located between the lateral and caudal preg synonym: "medial preglomerular nuclei" EXACT PLURAL [] xref: TAO:0000390 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000391 @@ -4591,9 +4592,9 @@ synonym: "medial zone of D" EXACT [] synonym: "medial zone of dorsal telencephalic area" EXACT [] xref: TAO:0000391 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000392 @@ -4602,9 +4603,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure which is part of the hypothalamus and consists of caudal and ventral zones, and is separated from the dorsal hypothalamic zone by a deep ventral sulcus. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000392 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000393 @@ -4613,8 +4614,8 @@ namespace: zebrafish_anatomy def: "A mesh-like cell arrangement, less compact than an epithelium." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000393 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000394 @@ -4623,9 +4624,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is the outermost layer of the corpus cerebelli and consists largely of axons and dendrites. Other cell types such as stellate and basket neurons are also found in the molecular layer." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000394 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000395 @@ -4636,9 +4637,9 @@ subset: cell_slim synonym: "muscle pioneers somite 2" EXACT PLURAL [] xref: TAO:0000395 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000396 @@ -4647,8 +4648,8 @@ namespace: zebrafish_anatomy def: "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000396 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000397 @@ -4657,9 +4658,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the caudal tuberculum. In trout the nucleus subglomerulosis receives gustatory information." [GOC:cvs, GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-2244-7917, PMID:11923003] xref: TAO:0000397 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000398 @@ -4668,9 +4669,9 @@ namespace: zebrafish_anatomy def: "The nucleus isthmi is a hindbrain nucleus located in the tegmentum of rhombomere 1 close to the secondary gustatory nucleus. It projects to and receives excitatory visual input from the ipsilateral optic tectum and the parvocellular and/or magnocellular superficial pretectal nucleus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100601-20] xref: TAO:0000398 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000399 @@ -4680,21 +4681,21 @@ def: "Nucleus that lies rostral to the isthmic primary nucleus." [ZFIN:ZDB-PUB-9 synonym: "secondary gustatory nucleus trigeminal nuclei" EXACT PLURAL [] xref: TAO:0000399 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000400 name: occipital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "supratemporal lateral line" EXACT [] xref: TAO:0000400 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000401 @@ -4704,9 +4705,9 @@ synonym: "cranial nerve VIII sensory nucleus" EXACT [] synonym: "octaval nerve sensory nuclei" EXACT PLURAL [] xref: TAO:0000401 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000402 @@ -4717,10 +4718,10 @@ synonym: "bulbus olfactorius" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "olfactory lobe" EXACT [] xref: TAO:0000402 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000403 @@ -4730,10 +4731,10 @@ def: "Female reproductive organ. The ovary is a bilobed cavitated organ located synonym: "ovaries" EXACT PLURAL [] xref: TAO:0000403 is_a: ZFA:0000413 ! gonad -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000303 ! female organism relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000404 @@ -4742,9 +4743,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the synencephalon and is located adjacent to the caudal commissure. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000404 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000405 @@ -4756,9 +4757,9 @@ synonym: "occulomotor" EXACT [] synonym: "oculomotor nerve" EXACT [] xref: TAO:0000405 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000406 @@ -4768,9 +4769,9 @@ def: "Diencephalic nucleus that is part of the superficial pretectum. From Neuro synonym: "parvocellular superficial pretectal nuclei" EXACT PLURAL [] xref: TAO:0000406 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000687 ! superficial pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000407 @@ -4780,9 +4781,9 @@ def: "Anatomical cluster of paired dermal and endochondral bones that attaches t synonym: "pectoral girdles" EXACT PLURAL [] xref: TAO:0000407 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000408 @@ -4792,9 +4793,9 @@ def: "Diencephalic nucleus which is located between the ventral thalamus and the synonym: "periventricular nucleus of posterior tuberculum" EXACT [] xref: TAO:0000408 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000410 @@ -4804,9 +4805,9 @@ def: "Dermal bone that is part of the pectoral girdle and located ventral to the synonym: "postcleithra" EXACT PLURAL [] xref: TAO:0000410 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000411 @@ -4816,9 +4817,9 @@ def: "Is an otic epithelium that will mature into the posterior crista." [GOC:ym synonym: "posterior crista primordia" EXACT PLURAL [] xref: TAO:0000411 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000412 @@ -4829,8 +4830,8 @@ synonym: "posterior semicircular canal primordia" RELATED PLURAL [] synonym: "posterior semicircular canal primordium" RELATED [] xref: TAO:0000412 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000413 @@ -4842,10 +4843,10 @@ synonym: "mature gonad" RELATED [] xref: TAO:0000413 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005272 ! immature gonad -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000632 ! reproductive system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000414 @@ -4854,9 +4855,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that is fated to become cephalic mesoderm." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000414 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000415 @@ -4866,8 +4867,8 @@ def: "Sphincter at the junction of the esophagus and pneumatic duct." [GOC:cvs, synonym: "oesophagial sphincter" EXACT [] xref: TAO:0000415 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000416 @@ -4876,8 +4877,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become endoderm. Determined by fate mapping." [ZFIN:ZDB-PUB-961014-608] xref: TAO:0000416 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000417 @@ -4889,9 +4890,9 @@ synonym: "presumptive spinal cord neural plate" EXACT [] synonym: "presumptive spinal cord neural rod" EXACT [] xref: TAO:0000417 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0007015 ! posterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000418 @@ -4900,9 +4901,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the dorsal part of the diencephalon, caudal to the telencephalon, rostral to the midbrain optic tectum; the major sensory input to the pretectum is visual. From The Laboratory Fish." [GOC:mh, ISBN:0125296509, ORCiD:0000-0001-9114-8737] xref: TAO:0000418 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000419 @@ -4913,12 +4914,12 @@ synonym: "pterosphenoids" EXACT PLURAL [] xref: TAO:0000419 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001515 ! taenia marginalis posterior -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005482 ! prootic-pterosphenoid joint relationship: overlaps ZFA:0005560 ! parasphenoid-basioccipital joint relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000420 @@ -4927,8 +4928,8 @@ namespace: zebrafish_anatomy synonym: "renal arteries" EXACT PLURAL [] xref: TAO:0000420 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000421 @@ -4937,9 +4938,9 @@ namespace: zebrafish_anatomy def: "Reticular formation is a complex network of neurons and diffuse nuclei that extends from the spinal cord centrally along the length of the brain to the mesencephalon. It s a dense, almost impenetrable network of seemingly random scattered nerve cells. The reticular formation integrates sensory inputs." [ISBN:0865777101] xref: TAO:0000421 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000422 @@ -4950,10 +4951,10 @@ synonym: "retroarticulars" EXACT PLURAL [] xref: TAO:0000422 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0005904 ! retroarticular process -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005618 ! anguloarticular-retroarticular joint relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000423 @@ -4964,21 +4965,21 @@ synonym: "ACV" EXACT [] synonym: "rostral cardinal vein" EXACT [] xref: TAO:0000423 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000096 ! cardinal system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000424 name: opercular lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "opercular lateral lines" EXACT PLURAL [] xref: TAO:0000424 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000425 @@ -4991,9 +4992,9 @@ synonym: "rostral lateral line nerve" EXACT [] xref: TAO:0000425 is_a: ZFA:0000641 ! cranial nerve is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000426 @@ -5004,9 +5005,9 @@ synonym: "anterior parvocellular preoptic nucleus" EXACT [] synonym: "rostral parvocellular preoptic nuclei" EXACT PLURAL [] xref: TAO:0000426 is_a: ZFA:0001680 ! parvocellular preoptic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000427 @@ -5017,9 +5018,9 @@ synonym: "anterior thalamic nucleus" EXACT [] synonym: "nucleus anterior thalami" EXACT [] xref: TAO:0000427 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000653 ! dorsal thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000428 @@ -5029,10 +5030,10 @@ def: "Otolith organ comprised of the macula saccule and sagitta. The lagena is p synonym: "sacculus" EXACT [] xref: TAO:0000428 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005410 ! pars inferior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000429 @@ -5041,10 +5042,10 @@ namespace: zebrafish_anatomy def: "The scaphium is a modification of NA 1 in which the neural arch is reduced and fused to a cup-shaped ossification of membrane bone, the concha. The second Weberian ossicle, consisting of three parts: the concha, the ascending process, and the articulating process." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000429 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001167 ! vertebra 1 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000430 @@ -5053,10 +5054,10 @@ namespace: zebrafish_anatomy def: "White matter connecting the primary gustatory nuclei to the secondary gustatory nucleus in the isthmus." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000430 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000431 @@ -5068,9 +5069,9 @@ synonym: "semicircular canals" EXACT PLURAL [] synonym: "semicircular duct" EXACT [] xref: TAO:0000431 is_a: ZFA:0007114 ! anatomical conduit -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005409 ! pars superior ear -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000433 @@ -5080,9 +5081,9 @@ synonym: "NVs" RELATED [] synonym: "sensory trigeminal nuclei" EXACT PLURAL [] xref: TAO:0000433 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000434 @@ -5090,8 +5091,8 @@ name: skeletal system namespace: zebrafish_anatomy xref: TAO:0000434 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000435 @@ -5103,9 +5104,9 @@ synonym: "optic" EXACT [] synonym: "optic nerve" EXACT [] xref: TAO:0000435 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000338 ! diencephalic white matter -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000436 @@ -5114,11 +5115,11 @@ namespace: zebrafish_anatomy def: "Organ that filters the blood removing defective blood cells. The spleen is a dark red organ, located in the peritoneal cavity, adjacent to one of the liver lobes. The spleen consists of red pulp composed of erythrocytes and thrombocytes and white pulp, composed of macrophages, reticular cells and reticulin fibers." [ZFIN:ZDB-PUB-110609-55] xref: TAO:0000436 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0005023 ! hematopoietic system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000437 @@ -5138,9 +5139,9 @@ synonym: "parhyural" EXACT [] synonym: "phy" EXACT [] xref: TAO:0000438 is_a: ZFA:0000859 ! specialized hemal arch and spine -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000557 ! preural 1 vertebra -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000439 @@ -5151,9 +5152,9 @@ synonym: "abductor superficialis pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "superficial pelvic abductors" EXACT PLURAL [] xref: TAO:0000439 is_a: ZFA:0005269 ! abductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000440 @@ -5165,9 +5166,9 @@ synonym: "anterior raphe nucleus" EXACT [] synonym: "dorsal raphe nucleus" RELATED [] xref: TAO:0000440 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001429 ! raphe nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000441 @@ -5176,9 +5177,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the preoptic area and is ventrolateral to the caudal parvocellular preoptic nucleus. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000441 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000442 @@ -5188,22 +5189,22 @@ def: "Supraneurals independent, median, elongate, rod-like cartilages or bones i synonym: "sn" EXACT [] xref: TAO:0000442 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000443 name: supraorbital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:JCN 421-\:189-198] +def: "One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "supraorbital lateral lines" EXACT PLURAL [] synonym: "supraorbital line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000443 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000444 @@ -5213,9 +5214,9 @@ synonym: "hyopalatine" EXACT [] synonym: "suspensoria" EXACT [] xref: TAO:0000444 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000445 @@ -5231,9 +5232,9 @@ synonym: "tectum opticum" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000445 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000446 @@ -5241,8 +5242,8 @@ name: tecto-bulbar tract namespace: zebrafish_anatomy xref: TAO:0000446 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000447 @@ -5252,9 +5253,9 @@ def: "Portion of tissue that is part of the primitive meninx which forms a fold, synonym: "tela choroidea" RELATED [] xref: TAO:0000447 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001355 ! primitive meninx -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000448 @@ -5263,10 +5264,10 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located ventral to the medial preglomerular nucleus in the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000448 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000449 @@ -5278,9 +5279,9 @@ synonym: "tori longitudinalis" EXACT PLURAL [] xref: TAO:0000449 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000450 @@ -5290,9 +5291,9 @@ synonym: "motor nucleus IV" EXACT [] synonym: "nIV" EXACT [] xref: TAO:0000450 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000451 @@ -5303,12 +5304,12 @@ synonym: "breathing valve" RELATED [] synonym: "buccal valve" RELATED [] synonym: "maxillary valve" EXACT [] synonym: "upper internal lip" RELATED [ZFIN:ZDB-PUB-060921-12] -synonym: "upper semilunar valve " EXACT [ZFIN:ZDB-PUB-060921-12] +synonym: "upper semilunar valve" EXACT [ZFIN:ZDB-PUB-060921-12] xref: TAO:0000451 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000452 @@ -5317,11 +5318,11 @@ namespace: zebrafish_anatomy def: "The urohyal is a median dermal bone that ossifies in the membrane between the paired sternohyoideus muscles ventral to the anterior end of copula 1. It is an unpaired ossification of the tendon of the sternohyoideos muscles in basal teleosts, and it is paired in catfishes (Arratia and Schultze, 1990)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000452 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005457 ! dorsal hypohyal-urohyal joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000453 @@ -5333,9 +5334,9 @@ synonym: "vagal nerve" EXACT [] synonym: "vagus nerve" EXACT [] xref: TAO:0000453 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000454 @@ -5344,9 +5345,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the central pretectum and is ventromedial to the magnocellular superficial pretectal nucleus and the caudal pretectal nucleus. The ventral accessory optic nucleus is very large in zebrafish as compared to other cyprinids. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000454 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000455 @@ -5358,9 +5359,9 @@ synonym: "flexor caudalis ventralis superioris" EXACT [] synonym: "ventral flexor" RELATED [] xref: TAO:0000455 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000456 @@ -5372,8 +5373,8 @@ synonym: "ventral division of ventral telencephalic area" RELATED [] synonym: "ventral nucleus of V" EXACT [] xref: TAO:0000456 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000457 @@ -5385,9 +5386,9 @@ synonym: "inferior rectus" EXACT [ZFIN:ZDB-PUB-110512-18] synonym: "ventral recti" EXACT PLURAL [] xref: TAO:0000457 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000458 @@ -5396,9 +5397,9 @@ namespace: zebrafish_anatomy synonym: "prethalamus" EXACT [ZFIN:ZDB-PUB-060207-11] xref: TAO:0000458 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001215 ! thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000459 @@ -5406,9 +5407,9 @@ name: ventromedial thalamic nucleus namespace: zebrafish_anatomy xref: TAO:0000459 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000460 @@ -5425,9 +5426,9 @@ def: "A group of modified neural arches and spines of the first four vertebrae. synonym: "Weberian ossicles" EXACT PLURAL [] xref: TAO:0000461 is_a: ZFA:0001491 ! solid compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000462 @@ -5438,9 +5439,9 @@ synonym: "abductors hyohyoid" EXACT PLURAL [] synonym: "hyohyoideus abductor" EXACT [] xref: TAO:0000462 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007052 ! hyohyoideus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000463 @@ -5449,20 +5450,20 @@ namespace: zebrafish_anatomy synonym: "adductors" EXACT PLURAL [] xref: TAO:0000463 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000464 name: otic lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "otic lateral lines" EXACT PLURAL [] xref: TAO:0000464 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000465 @@ -5473,8 +5474,8 @@ synonym: "adductor opercula" EXACT [] synonym: "adductor operculae" EXACT PLURAL [] xref: TAO:0000465 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000466 @@ -5485,9 +5486,9 @@ synonym: "anal depressors" EXACT PLURAL [] synonym: "depressores anales" RELATED [ZFIN:ZDB-PUB-171118-8] xref: TAO:0000466 is_a: ZFA:0005270 ! depressor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000467 @@ -5500,11 +5501,11 @@ is_a: ZFA:0001590 ! dermal bone is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001644 ! articular cartilage relationship: develops_from ZFA:0001645 ! angular bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005618 ! anguloarticular-retroarticular joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000468 @@ -5514,9 +5515,9 @@ def: "Is an otic epithelium that will mature into the anterior crista." [GOC:ymb synonym: "anterior crista primordia" EXACT PLURAL [] xref: TAO:0000468 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000469 @@ -5527,8 +5528,8 @@ synonym: "anterior semicircular canal primordia" RELATED PLURAL [] synonym: "anterior semicircular canal primordium" RELATED [] xref: TAO:0000469 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000470 @@ -5540,9 +5541,9 @@ synonym: "area preoptica" EXACT [] synonym: "preoptic region" EXACT [] xref: TAO:0000470 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000471 @@ -5552,9 +5553,9 @@ def: "Cavitated compound organ that receives inflow of deoxygenated blood and de xref: TAO:0000471 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001718 ! presumptive atrium heart tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000472 @@ -5564,14 +5565,14 @@ def: "Large median unpaired cartilage bone that contacts the exoccipital, epioti xref: TAO:0000472 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005423 ! basioccipital-exoccipital joint relationship: overlaps ZFA:0005560 ! parasphenoid-basioccipital joint relationship: overlaps ZFA:0005613 ! basioccipital-prootic joint relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000473 @@ -5581,8 +5582,8 @@ def: "Muscle system in the trunk." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "body musculature" EXACT [] xref: TAO:0000473 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000474 @@ -5592,9 +5593,9 @@ def: "Small membrane bone homologous with a cartilage bone in more basal fishes synonym: "opisthotic" EXACT [] xref: TAO:0000474 is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000189 ! otic region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000475 @@ -5604,9 +5605,9 @@ def: "Diencephalic nucleus which is located anterior to the caudal tuberal nucle synonym: "PVO" EXACT [] xref: TAO:0000475 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000476 @@ -5616,12 +5617,12 @@ def: "Dermal bone that is a bilaterally paired and flattened element that suppor synonym: "branchiostegal rays" EXACT PLURAL [] xref: TAO:0000476 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005465 ! ceratohyal-branchiostegal ray joint relationship: overlaps ZFA:0005498 ! epihyal-branchiostegal ray joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000477 @@ -5635,11 +5636,11 @@ synonym: "postcardinal vein" EXACT [] xref: TAO:0000477 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005077 ! vascular cord -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000479 @@ -5649,10 +5650,10 @@ def: "Brainstem tract which carries cerebellar afferents from the dorsal tegment synonym: "posterior mesencephalo-cerebellar tract" EXACT [] xref: TAO:0000479 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000643 ! rostral cerebellar tract relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000480 @@ -5662,8 +5663,8 @@ def: "Hindbrain nucleus which is part of the medulla oblongata and is a mechanor synonym: "nucleus octavolateralis caudalis" EXACT [] xref: TAO:0000480 is_a: ZFA:0000381 ! lateral line sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000481 @@ -5673,8 +5674,8 @@ def: "Preglomerular nucleus which is the most caudomedial of the preglomerular n synonym: "nucleus praeglomerulosus caudalis" EXACT [] xref: TAO:0000481 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000482 @@ -5684,9 +5685,9 @@ def: "Diencephalic nucleus which is located posterior to the paraventricular org synonym: "posterior tuberal nucleus" EXACT [] xref: TAO:0000482 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000484 @@ -5695,8 +5696,8 @@ namespace: zebrafish_anatomy synonym: "coeliac-mesenteric artery" EXACT [] xref: TAO:0000484 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000485 @@ -5708,9 +5709,9 @@ synonym: "central nucleus of the inferior lobe" EXACT [] synonym: "nucleus centralis lobi inferioris hypothalami" EXACT [] xref: TAO:0000485 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000165 ! inferior lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000486 @@ -5720,7 +5721,7 @@ def: "Paired dermal bone that covers the hind part of the cranium, overlapping t synonym: "post parietal" EXACT [] xref: TAO:0000486 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005607 ! inter-parietal joint relationship: overlaps ZFA:0005608 ! frontal-parietal joint relationship: overlaps ZFA:0005609 ! supraoccipital-parietal joint @@ -5729,7 +5730,7 @@ relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000487 @@ -5741,9 +5742,9 @@ synonym: "central zone of D" EXACT [] synonym: "Dc" EXACT [ZFIN:ZDB-PUB-150226-6] xref: TAO:0000487 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000488 @@ -5753,9 +5754,9 @@ def: "Endochondral bone that is bilaterally paired and forms part of the ventral synonym: "ceratobranchial bones" EXACT PLURAL [] xref: TAO:0000488 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000490 @@ -5765,8 +5766,8 @@ def: "Cerebellar commissure which is located within the ventral boundary zone be synonym: "cerebellar commissure" EXACT [] xref: TAO:0000490 is_a: ZFA:0001708 ! cerebellar white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000491 @@ -5779,8 +5780,8 @@ synonym: "CPT" RELATED [ZFIN:ZDB-PUB-961014-1268] synonym: "Ctub" RELATED [ZFIN:ZDB-PUB-120424-30] xref: TAO:0000491 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000492 @@ -5788,9 +5789,9 @@ name: coracoradialis namespace: zebrafish_anatomy xref: TAO:0000492 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000493 @@ -5798,9 +5799,9 @@ name: decussation of medial funicular nucleus namespace: zebrafish_anatomy xref: TAO:0000493 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000494 @@ -5809,9 +5810,9 @@ namespace: zebrafish_anatomy synonym: "deep white zones" EXACT PLURAL [] xref: TAO:0000494 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000495 @@ -5821,9 +5822,9 @@ def: "Plate like dermal bone with usually only one neuromast pore (Nelson, 1969) synonym: "dermosphenotic" EXACT [] xref: TAO:0000495 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000496 @@ -5834,9 +5835,9 @@ synonym: "organ" EXACT [] xref: CARO:0000024 xref: TAO:0000496 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000497 @@ -5847,23 +5848,23 @@ synonym: "adductor profundus pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "pelvic adductors profundus" EXACT PLURAL [] xref: TAO:0000497 is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000498 name: dilatator operculi namespace: zebrafish_anatomy def: "Mandibular muscle that inserts along the dorsolateral faces of the opercles. Responsible for opercular abduction." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-020703-2, ZFIN:ZDB-PUB-080306-33] -synonym: " dilatator opercula" EXACT [] +synonym: "dilatator opercula" EXACT [] synonym: "dilator opercula" RELATED [] synonym: "dilators operculi" RELATED PLURAL [] xref: TAO:0000498 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000499 @@ -5876,8 +5877,8 @@ synonym: "dorsal arrectors" EXACT PLURAL [] xref: TAO:0000499 is_a: ZFA:0005275 ! arrector muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000500 @@ -5888,9 +5889,9 @@ synonym: "dorsal erectors" EXACT PLURAL [] synonym: "erector dorsalis" EXACT [] xref: TAO:0000500 is_a: ZFA:0005267 ! erector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000501 @@ -5899,9 +5900,9 @@ namespace: zebrafish_anatomy synonym: "funiculus dorsalis" EXACT [] xref: TAO:0000501 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000502 @@ -5910,8 +5911,8 @@ namespace: zebrafish_anatomy def: "Trigeminal motor nucleus that is located dorsal to the lateral longitudinal fascicle." [ISBN:3764351209] xref: TAO:0000502 is_a: ZFA:0001365 ! trigeminal motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000503 @@ -5920,8 +5921,8 @@ namespace: zebrafish_anatomy synonym: "dorsal oblique branchial muscles" EXACT PLURAL [] xref: TAO:0000503 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000504 @@ -5930,8 +5931,8 @@ namespace: zebrafish_anatomy synonym: "dorsal retractors" EXACT PLURAL [] xref: TAO:0000504 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000505 @@ -5944,9 +5945,9 @@ synonym: "dorsal telencephalic area" EXACT [] synonym: "pallium" EXACT [] xref: TAO:0000505 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000506 @@ -5959,9 +5960,9 @@ synonym: "dorsal zone of D" EXACT [] synonym: "dorsal zone of dorsal telencephalic area" EXACT [] xref: TAO:0000506 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000507 @@ -5971,8 +5972,8 @@ def: "Some or all epineural bones ossify free from the neural arches in most tel synonym: "epineurals" EXACT PLURAL [] xref: TAO:0000507 is_a: ZFA:0000526 ! intermuscular bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000508 @@ -5982,9 +5983,9 @@ def: "Internal skeletal supports of the pelvic fin." [TAO:curator] synonym: "pelvic radials" EXACT PLURAL [] xref: TAO:0000508 is_a: ZFA:0000271 ! radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000509 @@ -5993,9 +5994,9 @@ namespace: zebrafish_anatomy def: "Brain structure which is part of the diencephalon and consists of the dorsal and ventral nuclei of the habenula, and two dorsal outgrowths, the epiphysis and the saccus dorsalis. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] xref: TAO:0000509 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000510 @@ -6004,8 +6005,8 @@ namespace: zebrafish_anatomy synonym: "external levators" EXACT PLURAL [] xref: TAO:0000510 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000511 @@ -6015,8 +6016,8 @@ def: "Muscle system surrounding the eye. The extraocular musculature is derived synonym: "ocular musculature" RELATED [] xref: TAO:0000511 is_a: ZFA:0000328 ! cephalic musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000512 @@ -6025,12 +6026,12 @@ namespace: zebrafish_anatomy def: "Hindbrain nucleus that doesn't project to the spinal cord." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-970218-12] synonym: "lobus facialis" EXACT [] synonym: "LVII" EXACT [ZFIN:ZDB-PUB-961014-1280] -synonym: "tuberculum impar of Herrick " RELATED [] +synonym: "tuberculum impar of Herrick" RELATED [] xref: TAO:0000512 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000513 @@ -6042,9 +6043,9 @@ synonym: "fast muscle cells somite 1" EXACT PLURAL [] synonym: "fast muscle fiber somite 1" EXACT [] xref: TAO:0000513 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000514 @@ -6053,7 +6054,7 @@ namespace: zebrafish_anatomy def: "Large elongated paired dermal bones that roof the cranium and bear part of the supraorbital canal. The frontal bones cover the upper edge of the lateral ethmoid, orbitosphenoid and pterosphenoids and overlaps the parietal bone posteriorly." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000514 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005468 ! frontal-pterotic joint relationship: overlaps ZFA:0005472 ! inter-frontal joint relationship: overlaps ZFA:0005608 ! frontal-parietal joint @@ -6061,7 +6062,7 @@ relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000516 @@ -6081,9 +6082,9 @@ xref: TAO:0000516 xref: TAO:0001352 is_a: ZFA:0001477 ! portion of tissue is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000517 @@ -6092,9 +6093,9 @@ namespace: zebrafish_anatomy synonym: "lobus glossopharyngei" EXACT [] xref: TAO:0000517 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000518 @@ -6105,9 +6106,9 @@ synonym: "central gray" EXACT [] synonym: "central grey" EXACT [] xref: TAO:0000518 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000519 @@ -6119,9 +6120,9 @@ synonym: "ventral arcocentrum" EXACT [] xref: TAO:0000519 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001361 ! basiventral -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000326 ! caudal vertebra -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000520 @@ -6129,8 +6130,8 @@ name: horizontal commissure namespace: zebrafish_anatomy xref: TAO:0000520 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000521 @@ -6140,10 +6141,10 @@ def: "Muscles that insert into skeletal elements of pharyngeal arch 2 (hyoid arc synonym: "hyoid muscles" EXACT PLURAL [] xref: TAO:0000521 is_a: ZFA:0001652 ! head muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001611 ! pharyngeal arch 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000522 @@ -6154,9 +6155,9 @@ synonym: "hyohyoideus inferior" RELATED [] synonym: "inferior hyohyoids" EXACT PLURAL [] xref: TAO:0000522 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007052 ! hyohyoideus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000523 @@ -6164,21 +6165,21 @@ name: inferior reticular formation namespace: zebrafish_anatomy xref: TAO:0000523 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000542 ! medial column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000524 name: infraorbital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "infraorbital line" EXACT [] xref: TAO:0000524 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000525 @@ -6187,10 +6188,10 @@ namespace: zebrafish_anatomy def: "Third Weberian ossicle. The intercalarium is a Y- or T-shaped modification of neural arch 2 in which an anteriolateral process (the manubrium) is embedded in the interossicular ligament; other parts include the ascending and articulating processes." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0000525 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001168 ! vertebra 2 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000526 @@ -6200,9 +6201,9 @@ def: "Axial bone which is a segmental ossification that forms in the myoseptum; synonym: "intermuscular bones" EXACT PLURAL [] xref: TAO:0000526 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000527 @@ -6213,9 +6214,9 @@ synonym: "infrapharyngobranchial" EXACT [] synonym: "pharyngobranchials" EXACT [] xref: TAO:0000527 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000528 @@ -6227,9 +6228,9 @@ synonym: "interradiali" EXACT PLURAL [] synonym: "interradialis" EXACT [] xref: TAO:0000528 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000628 ! caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000529 @@ -6239,11 +6240,11 @@ def: "Cavitated compound organ located in the pleuroperitoneal cavity where hema synonym: "mesonephros" EXACT [] xref: TAO:0000529 is_a: ZFA:0001490 ! cavitated compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000530 @@ -6256,9 +6257,9 @@ synonym: "utricular otolith" EXACT [] synonym: "utriculith" EXACT [] xref: TAO:0000530 is_a: ZFA:0001617 ! otolith -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000700 ! utricle -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000531 @@ -6267,9 +6268,9 @@ namespace: zebrafish_anatomy synonym: "lateral columns" EXACT PLURAL [] xref: TAO:0000531 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000421 ! reticular formation -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000532 @@ -6280,9 +6281,9 @@ synonym: "lateral division" EXACT [] synonym: "valvula cerebelli, pars lateralis" EXACT [] xref: TAO:0000532 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000533 @@ -6291,9 +6292,9 @@ namespace: zebrafish_anatomy synonym: "lateral funiculi" EXACT PLURAL [] xref: TAO:0000533 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000534 @@ -6307,9 +6308,9 @@ synonym: "lateral longitundinal fasciculus" EXACT [] synonym: "LLF" RELATED [] xref: TAO:0000534 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000535 @@ -6318,9 +6319,9 @@ namespace: zebrafish_anatomy synonym: "lateral reticular nuclei" EXACT PLURAL [] xref: TAO:0000535 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000531 ! lateral column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000536 @@ -6333,9 +6334,9 @@ synonym: "lateral zone of D" EXACT [] synonym: "lateral zone of dorsal telencephalic area" EXACT [] xref: TAO:0000536 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000537 @@ -6345,8 +6346,8 @@ def: "Hyoid muscle that originates at the ventrolateral margin of the pterotic a synonym: "levator operculae" EXACT [] xref: TAO:0000537 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000538 @@ -6357,9 +6358,9 @@ synonym: "dorsal rib" EXACT [] synonym: "pleural rib" EXACT [] xref: TAO:0000538 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000539 @@ -6370,9 +6371,9 @@ comment: Sometimes considered part of the reticular formation. synonym: "loci coeruleus" EXACT PLURAL [] xref: TAO:0000539 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000540 @@ -6381,8 +6382,8 @@ namespace: zebrafish_anatomy synonym: "magnocellular octaval nuclei" EXACT PLURAL [] xref: TAO:0000540 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000541 @@ -6393,8 +6394,8 @@ subset: cell_slim synonym: "marginal blastomeres" EXACT PLURAL [] xref: TAO:0000541 is_a: ZFA:0000093 ! blastomere -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000005 ! Cleavage:16-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000005 ! cleavage:16-cell [Term] id: ZFA:0000542 @@ -6404,9 +6405,9 @@ synonym: "medial column of the reticular formation" EXACT [] synonym: "medial columns" EXACT PLURAL [] xref: TAO:0000542 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000421 ! reticular formation -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000543 @@ -6416,8 +6417,8 @@ def: "The medial longitudinal fasciculus (MLF) is a pair of crossed fiber tracts synonym: "MLF" RELATED [] xref: TAO:0000543 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000544 @@ -6433,10 +6434,10 @@ namespace: zebrafish_anatomy def: "Brain structure that is located ventrocaudal to the cerebellum and just anterior to the spinal cord and contains the sensory and motor nuclei of six cranial nerves. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata." [ISBN:3764351209] xref: TAO:0000545 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000546 @@ -6447,9 +6448,9 @@ synonym: "renal duct" RELATED [] synonym: "Wolffian duct" RELATED [] xref: TAO:0000546 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000163 ! renal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000547 @@ -6458,10 +6459,10 @@ namespace: zebrafish_anatomy xref: TAO:0000547 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001290 ! stomodeum -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000548 @@ -6470,24 +6471,24 @@ namespace: zebrafish_anatomy def: "Anatomical system consisting of the cardiac, skeletal and smooth muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000548 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000549 name: posttemporal namespace: zebrafish_anatomy def: "Paired fin bone that attaches the pectoral girdle to the skull via two projections contacting the epiotic and intercalar bones, and carry the main laterosensory canal." [GOC:mh, ORCiD:0000-0001-9114-8737] -synonym: "post-temporal " RELATED [] +synonym: "post-temporal" RELATED [] synonym: "postemporal" EXACT [] xref: TAO:0000549 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005889 ! epiotic-posttemporal joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000407 ! pectoral girdle relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000550 @@ -6498,10 +6499,10 @@ synonym: "nares" EXACT PLURAL [] synonym: "nostril" EXACT [] xref: TAO:0000550 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000551 @@ -6510,9 +6511,9 @@ namespace: zebrafish_anatomy def: "Hindbrain nucleus in the tegmental region of rhombomere 1. The cells of the nucleus are granular and lie at the ventral border of the cerebellum and brain stem." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100601-20, ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000551 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000552 @@ -6522,9 +6523,9 @@ def: "Nucleus located in the midbrain tegmentum that controls motor coordination synonym: "red nucleus" EXACT [] xref: TAO:0000552 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000553 @@ -6534,9 +6535,9 @@ synonym: "motor nucleus III" EXACT [] synonym: "nIII" EXACT [] xref: TAO:0000553 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000554 @@ -6548,9 +6549,9 @@ synonym: "nasal sensory epithelium" EXACT [] xref: TAO:0000554 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0001431 ! primitive olfactory epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000555 @@ -6564,8 +6565,8 @@ synonym: "opercular cover" RELATED [ZFIN:ZDB-PUB-030304-18] synonym: "operculum" EXACT [] xref: TAO:0000555 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000556 @@ -6576,8 +6577,8 @@ synonym: "chiasma opticum" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "optic commissure" EXACT [] xref: TAO:0000556 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000557 @@ -6590,8 +6591,8 @@ synonym: "pu1" EXACT [] synonym: "second last vertebra" EXACT [] xref: TAO:0000557 is_a: ZFA:0000734 ! preural vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000558 @@ -6603,9 +6604,9 @@ synonym: "posterior sensory patch" EXACT [] synonym: "posteromedial macula" EXACT [] xref: TAO:0000558 is_a: ZFA:0000386 ! macula -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001671 ! macula communis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000559 @@ -6615,9 +6616,9 @@ def: "Cavitated compound organ that is a fluid filed chamber with a maculae on synonym: "otolith organs" EXACT PLURAL [] xref: TAO:0000559 is_a: ZFA:0001490 ! cavitated compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000560 @@ -6627,10 +6628,10 @@ def: "Duct that connects ovary with cloacal chamber. In zebrafish the oviduct i synonym: "oviducts" EXACT PLURAL [] xref: TAO:0000560 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000303 ! female organism relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000561 @@ -6639,14 +6640,14 @@ namespace: zebrafish_anatomy def: "Long, unpaired median dermal bone that runs almost the entire length of the cranium. Contacts the prevomer anteriorly, and the prootic and basioccipital posteriorly. Anteriorly the parasphenoid is a long, thin bone that widens abruptly at the point of contact with the prootic." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000561 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000563 @@ -6657,10 +6658,10 @@ synonym: "pectoral fin muscle" RELATED [] xref: TAO:0000563 is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001000 ! mesenchyme pectoral fin -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005924 ! middle migratory muscle precursor stream relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000564 @@ -6671,9 +6672,9 @@ synonym: "abductor profundus pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "pelvic abductors profundus" EXACT PLURAL [] xref: TAO:0000564 is_a: ZFA:0005269 ! abductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000565 @@ -6683,9 +6684,9 @@ def: "Anatomical cluster that consists of the paired basipterygia which support synonym: "pelvic girdles" EXACT PLURAL [] xref: TAO:0000565 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000566 @@ -6702,9 +6703,9 @@ synonym: "posterior semicircular canal sensory patches" EXACT PLURAL [] xref: TAO:0000566 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000411 ! posterior crista primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000567 @@ -6714,11 +6715,11 @@ def: "The premaxilla is a bone of the upper jaw. It is an L-shaped bone first vi synonym: "premaxillae" EXACT PLURAL [] xref: TAO:0000567 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005475 ! inter-premaxillary joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000568 @@ -6727,8 +6728,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become blood. Determined by marker expression." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000568 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000569 @@ -6738,10 +6739,10 @@ def: "Embryonic structure that gives rise to the hindbrain." [GOC:mh, ORCiD:0000 synonym: "presumptive rhombencephalon" EXACT [] xref: TAO:0000569 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007015 ! posterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000570 @@ -6752,9 +6753,9 @@ def: "Portion of tissue that is part of the anterior neural keel and will form t synonym: "eye field" EXACT [] xref: TAO:0000570 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000571 @@ -6763,9 +6764,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the telencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000571 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000573 @@ -6775,9 +6776,9 @@ def: "Portion of tissue which is the innermost layer of the olfactory bulb. From synonym: "stratum cellulare internum bulbi olfactorii" EXACT [] xref: TAO:0000573 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000574 @@ -6786,9 +6787,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the diencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000574 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000575 @@ -6801,14 +6802,14 @@ is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: develops_from ZFA:0001425 ! basal plate cartilage relationship: develops_from ZFA:0001500 ! auditory capsule -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005887 ! posterior basicapsular commissure relationship: overlaps ZFA:0005482 ! prootic-pterosphenoid joint relationship: overlaps ZFA:0005613 ! basioccipital-prootic joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000576 @@ -6819,13 +6820,13 @@ synonym: "autopterotic" EXACT [] xref: TAO:0000576 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001500 ! auditory capsule -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005468 ! frontal-pterotic joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000577 @@ -6835,9 +6836,9 @@ def: "Afferent vein that supplies the kidney." [GOC:cvs, ISBN:9781118222942, ORC synonym: "renal portal veins" EXACT PLURAL [] xref: TAO:0000577 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000578 @@ -6850,14 +6851,14 @@ synonym: "rostral ceratohyal" EXACT [] xref: TAO:0000578 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005465 ! ceratohyal-branchiostegal ray joint relationship: overlaps ZFA:0005466 ! ceratohyal-ventral hypohyal joint relationship: overlaps ZFA:0005467 ! ceratohyal-dorsal hypohyal joint relationship: overlaps ZFA:0005497 ! epihyal-ceratohyal joint relationship: overlaps ZFA:0005859 ! ceratohyal-interhyal joint relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000579 @@ -6867,10 +6868,10 @@ def: "Brainstem tract which carries cerebellar afferents from the pretectum and synonym: "anterior mesencephalo-cerebellar tract" EXACT [] xref: TAO:0000579 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000643 ! rostral cerebellar tract relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000580 @@ -6881,8 +6882,8 @@ synonym: "anterior preglomerular nucleus" EXACT [] synonym: "nucleus praeglomerulosus anterior" EXACT [] xref: TAO:0000580 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000581 @@ -6893,9 +6894,9 @@ synonym: "anterior tuberal nucleus" EXACT [] synonym: "nucleus tuberis anterior" EXACT [] xref: TAO:0000581 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000582 @@ -6903,9 +6904,9 @@ name: saccus dorsalis namespace: zebrafish_anatomy xref: TAO:0000582 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000583 @@ -6916,9 +6917,9 @@ synonym: "scapulae" EXACT PLURAL [] xref: TAO:0000583 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000585 @@ -6927,8 +6928,8 @@ namespace: zebrafish_anatomy def: "Cranial cartilage which is a small median cartilage located between the premaxillae and anterodorsal to the ethmoid." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000585 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000586 @@ -6941,8 +6942,8 @@ synonym: "pu2" EXACT [] synonym: "third last vertebra" EXACT [] xref: TAO:0000586 is_a: ZFA:0000734 ! preural vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000587 @@ -6954,11 +6955,11 @@ xref: TAO:0000587 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001506 ! tectum synoticum relationship: develops_from ZFA:0001515 ! taenia marginalis posterior -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000588 @@ -6967,16 +6968,16 @@ namespace: zebrafish_anatomy def: "The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)" [GOC:mh, ORCiD:0000-0001-9114-8737] synonym: "auditory ganglion" EXACT [] synonym: "gVIII" EXACT [] -synonym: "octaval ganglion " EXACT [] +synonym: "octaval ganglion" EXACT [] synonym: "sag" EXACT [] synonym: "statoacoustic ganglia" EXACT PLURAL [] xref: TAO:0000588 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000138 ! otic placode relationship: develops_from ZFA:0000762 ! facio-acoustic neural crest -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000589 @@ -6985,9 +6986,9 @@ namespace: zebrafish_anatomy def: "Anatomical groove which separates the dorsal and medial zones of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [GOC:cvs, GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-2244-7917] xref: TAO:0000589 is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000590 @@ -6996,9 +6997,9 @@ namespace: zebrafish_anatomy def: "Region of the head where the mouth and oral structures are located." [GOC:ymb, ORCid:0000-0002-9900-7880] xref: TAO:0000590 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000591 @@ -7007,8 +7008,8 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become paraxial mesoderm. Determined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000591 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000021 ! gastrula:90%-epiboly +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000592 @@ -7019,9 +7020,9 @@ synonym: "adductor superficialis pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "superficial pelvic adductors" EXACT PLURAL [] xref: TAO:0000592 is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000593 @@ -7030,9 +7031,9 @@ namespace: zebrafish_anatomy comment: There may be a cholinergic nucleus called the superior reticular nucleus rostral to the locus coeruleus, ZDB-PUB-040526-6. xref: TAO:0000593 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000542 ! medial column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000594 @@ -7042,9 +7043,9 @@ def: "Dermal bone that articulates dorsally with the posttemporal and ventrally synonym: "supracleithra" EXACT PLURAL [] xref: TAO:0000594 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000595 @@ -7054,13 +7055,13 @@ def: "Large shield-shaped unpaired median cartilage bone that contact the pariet xref: TAO:0000595 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001506 ! tectum synoticum -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005609 ! supraoccipital-parietal joint relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000596 @@ -7077,9 +7078,9 @@ def: "CNS white matter that is part of the telencephalon." [GOC:mh, ORCiD:0000-0 synonym: "telencephalic tract/commissure" EXACT [] xref: TAO:0000597 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000598 @@ -7089,23 +7090,23 @@ def: "Male reproductive organ. Adult zebrafish testes are paired organs forming synonym: "testes" EXACT PLURAL [] xref: TAO:0000598 is_a: ZFA:0000413 ! gonad -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000242 ! male organism relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000599 name: torus semicircularis namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the midbrain and develops from the alar plate. The torus semicircularis is located dorsal to the lateral tegmentum where it extends into the medial tectal ventricle and receives ascending sensory octavolateralis input." [GOC:mh, ORCiD:0000-0001-9114-8737] -synonym: "semicircular torus " EXACT [] +synonym: "semicircular torus" EXACT [] xref: TAO:0000599 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000600 @@ -7117,9 +7118,9 @@ synonym: "trochlear" EXACT [] synonym: "trochlear nerve" EXACT [] xref: TAO:0000600 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000601 @@ -7130,10 +7131,10 @@ synonym: "periventricular pretectum" EXACT [] synonym: "pretectal periventricular nuclei" EXACT PLURAL [] xref: TAO:0000601 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon relationship: part_of ZFA:0000418 ! pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000602 @@ -7143,9 +7144,9 @@ def: "Neural arch that extends along the dorso-lateral surface of the last preur synonym: "uroneurals" EXACT PLURAL [] xref: TAO:0000602 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000603 @@ -7156,9 +7157,9 @@ synonym: "valvula" RELATED [] synonym: "valvula cerebellum" EXACT PLURAL [] xref: TAO:0000603 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000604 @@ -7167,8 +7168,8 @@ namespace: zebrafish_anatomy def: "Outflow artery from the heart to the aortic arches." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000604 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000605 @@ -7177,9 +7178,9 @@ namespace: zebrafish_anatomy synonym: "ventral funiculi" EXACT PLURAL [] xref: TAO:0000605 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000606 @@ -7188,8 +7189,8 @@ namespace: zebrafish_anatomy synonym: "ventral oblique branchial muscles" EXACT PLURAL [] xref: TAO:0000606 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000607 @@ -7198,19 +7199,19 @@ namespace: zebrafish_anatomy def: "Brainstem commissure that intersects the medial longitudinal fasciculus." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000607 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000608 name: ventral transverse namespace: zebrafish_anatomy synonym: "transverse ventralis" EXACT [] -synonym: "transversus ventralis " EXACT [] +synonym: "transversus ventralis" EXACT [] xref: TAO:0000608 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000609 @@ -7219,9 +7220,9 @@ namespace: zebrafish_anatomy def: "Midbrain nucleus which is part of the torus semicircularis and is the target of ascending octavolateralis systems related to mechanoreception. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000609 is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000599 ! torus semicircularis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000610 @@ -7231,8 +7232,8 @@ def: "Connective tissue partitions developing between the myotomes." [GOC:mh, OR synonym: "transverse myoseptum" EXACT [] xref: TAO:0000610 is_a: ZFA:0001089 ! myoseptum -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000611 @@ -7241,9 +7242,9 @@ namespace: zebrafish_anatomy def: "Collection of the visceromotor nuclei and their fiber tracts in the medulla oblongata." [ISBN:3540560130] xref: TAO:0000611 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000612 @@ -7255,8 +7256,8 @@ synonym: "protractor hyoideus" EXACT PLURAL [] synonym: "protractors hyoidei" EXACT PLURAL [] xref: TAO:0000612 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000614 @@ -7267,9 +7268,9 @@ synonym: "abductors profundus" EXACT PLURAL [] xref: TAO:0000614 is_a: ZFA:0005269 ! abductor muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000615 @@ -7279,8 +7280,8 @@ def: "Hyoid muscle that originates at the parasphenoid and inserts into the mesi synonym: "adductors arcus palatini" EXACT PLURAL [] xref: TAO:0000615 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000616 @@ -7291,9 +7292,9 @@ synonym: "adductors profundus" EXACT PLURAL [] xref: TAO:0000616 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000617 @@ -7304,9 +7305,9 @@ synonym: "anal erectors" EXACT PLURAL [] synonym: "erectores anales" EXACT [ZFIN:ZDB-PUB-171118-8] xref: TAO:0000617 is_a: ZFA:0005267 ! erector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000618 @@ -7318,8 +7319,8 @@ synonym: "commissura ansulata" EXACT [] synonym: "ventral tegmental commissure" EXACT [] xref: TAO:0000618 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000619 @@ -7336,9 +7337,9 @@ synonym: "rostral crista" EXACT [] xref: TAO:0000619 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000468 ! anterior crista primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000620 @@ -7349,12 +7350,12 @@ synonym: "palatine" EXACT [] xref: TAO:0000620 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005420 ! autopalatine-lateral ethmoid joint relationship: overlaps ZFA:0005421 ! autopalatine-maxillary joint relationship: overlaps ZFA:0005422 ! autopalatine-vomer joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000621 @@ -7365,11 +7366,11 @@ synonym: "quadrates" EXACT PLURAL [] xref: TAO:0000621 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005486 ! quadrate-metapterygoid joint relationship: overlaps ZFA:0005616 ! quadrate-entopterygoid joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000622 @@ -7380,10 +7381,10 @@ synonym: "barble" EXACT [] xref: TAO:0000622 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0005119 ! barbel primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0000623 @@ -7395,10 +7396,10 @@ synonym: "pelvic girdle" RELATED [] xref: TAO:0000623 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001539 ! basipterygium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005471 ! inter-basipterygium joint relationship: part_of ZFA:0000565 ! pelvic girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000624 @@ -7416,8 +7417,8 @@ def: "Brainstem and spinal tract which emerges medial to the caudal intermediate synonym: "tractus bulbospinalis" EXACT [] xref: TAO:0000626 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000627 @@ -7429,11 +7430,11 @@ synonym: "posterior ceratohyal" EXACT [] xref: TAO:0000627 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005497 ! epihyal-ceratohyal joint relationship: overlaps ZFA:0005498 ! epihyal-branchiostegal ray joint relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000628 @@ -7442,9 +7443,9 @@ namespace: zebrafish_anatomy def: "Fin musculature that is part of the caudal fin. The musculature is composed of 12 muscles that are arranged in a superficial and a deep muscle layer. Nerve roots of spinal segments 27-31 supply the caudal fin muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-011008-1] xref: TAO:0000628 is_a: ZFA:0000207 ! fin musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000629 @@ -7455,8 +7456,8 @@ synonym: "nucleus nervi abducentis, pars caudalis" EXACT [] synonym: "nVIc" EXACT [] xref: TAO:0000629 is_a: ZFA:0000713 ! abducens motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000630 @@ -7467,9 +7468,9 @@ synonym: "caudal parvocellular preoptic nuclei" EXACT PLURAL [] synonym: "posterior parvocellular preoptic nucleus" EXACT [] xref: TAO:0000630 is_a: ZFA:0001680 ! parvocellular preoptic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000631 @@ -7480,9 +7481,9 @@ synonym: "caudal pretectal nuclei" EXACT PLURAL [] synonym: "posterior pretectal nucleus" EXACT [] xref: TAO:0000631 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000687 ! superficial pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000632 @@ -7491,8 +7492,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that has as its parts the organs concerned with reproduction." [UBERON:curator] xref: TAO:0000632 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000633 @@ -7503,10 +7504,10 @@ synonym: "posterior tubercle" EXACT [] synonym: "posterior tuberculum" EXACT [] xref: TAO:0000633 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005909 ! presumptive preglomerular region relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000634 @@ -7516,9 +7517,9 @@ def: "Multi-tissue structure which forms most of the median tuberal portion of t synonym: "hypothalamus pars tuberalis " EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "tuberal hypothalamus" EXACT [ZFIN:ZDB-PUB-961014-1280] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000392 ! median tuberal portion -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000635 @@ -7528,9 +7529,9 @@ def: "Diencephalic nucleus that is part of the central pretectum and is dorsal t synonym: "nucleus praetectalis centralis" EXACT [] xref: TAO:0000635 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000636 @@ -7541,9 +7542,9 @@ comment: Not sure how much of the molecular layer is cerebellar crest. synonym: "crista cerebellaris molecular layer" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000636 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000291 ! medial octavolateralis nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000637 @@ -7552,9 +7553,9 @@ namespace: zebrafish_anatomy def: "Postcranial axial cartilage and Weberian ossicle that is located dorsal to the scaphium. The claustrum is bilaterally paired." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000637 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000638 @@ -7564,8 +7565,8 @@ def: "Anterior commissure which is located immediately ventral to the supracommi synonym: "commissura anterior, pars dorsalis" EXACT [] xref: TAO:0000638 is_a: ZFA:0001108 ! anterior commissure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000639 @@ -7576,9 +7577,9 @@ synonym: "commissura nucleorum gustatoriorum secundariorum" EXACT [] synonym: "commissure of the secondary gustatory nuclei" RELATED [] xref: TAO:0000639 is_a: ZFA:0001708 ! cerebellar white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000640 @@ -7589,9 +7590,9 @@ synonym: "corneas" EXACT PLURAL [] xref: TAO:0000640 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001688 ! corneal primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000641 @@ -7601,8 +7602,8 @@ def: "Twelve pairs of cranial nerves exit/enter the cranium through openings in synonym: "cranial nerves" EXACT PLURAL [] xref: TAO:0000641 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000642 @@ -7610,9 +7611,9 @@ name: decussation of the medial octavolateralis nucleus namespace: zebrafish_anatomy xref: TAO:0000642 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000381 ! lateral line sensory nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000643 @@ -7623,9 +7624,9 @@ synonym: "anterior cerebellar tract" EXACT [] synonym: "tractus cerebellaris anterior" EXACT [] xref: TAO:0000643 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000644 @@ -7643,8 +7644,8 @@ namespace: zebrafish_anatomy synonym: "nucleus octavus descendens" EXACT [] xref: TAO:0000645 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000646 @@ -7654,9 +7655,9 @@ def: "Rod-like internal median skeletal support bones of the anal fin, which art synonym: "anal fin distal radials" EXACT PLURAL [] xref: TAO:0000646 is_a: ZFA:0001646 ! anal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001420 ! anal fin pterygiophore -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000647 @@ -7667,9 +7668,9 @@ synonym: "dorsal posterior thalamic nucleus" EXACT [] synonym: "nucleus dorsalis posterior thalami" EXACT [] xref: TAO:0000647 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000653 ! dorsal thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000648 @@ -7678,9 +7679,9 @@ namespace: zebrafish_anatomy def: "Musculature that is part of the dorsal fin. The dorsal fin musculature is composed of one unit per fin ray that are arranged in series on each side of the body. Each unit is composed of one fin ray, three supporting pterygophores, and a set of paired depressor, erector, and inclinator muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] xref: TAO:0000648 is_a: ZFA:0000207 ! fin musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000649 @@ -7690,9 +7691,9 @@ synonym: "cornu dorsale" EXACT [] synonym: "dorsal horn" EXACT [] xref: TAO:0000649 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000650 @@ -7701,9 +7702,9 @@ namespace: zebrafish_anatomy synonym: "dorsal motor roots of V" EXACT PLURAL [] xref: TAO:0000650 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000651 @@ -7714,9 +7715,9 @@ synonym: "arrector dorsalis pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "dorsal pelvic arrectors" EXACT PLURAL [] xref: TAO:0000651 is_a: ZFA:0005275 ! arrector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000652 @@ -7726,9 +7727,9 @@ def: "The afferent sensory portion of the spinal nerve root." [http://en.wikiped synonym: "radix dorsalis" EXACT [] xref: TAO:0000652 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005578 ! spinal nerve root -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000653 @@ -7739,9 +7740,9 @@ synonym: "thalamus" RELATED [ZFIN:ZDB-PUB-100621-4] synonym: "thalamus, pars dorsalis" EXACT [] xref: TAO:0000653 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001215 ! thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000654 @@ -7750,8 +7751,8 @@ namespace: zebrafish_anatomy def: "Abducens motor nucleus which is located at the level of the superior reticular formation." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000654 is_a: ZFA:0000713 ! abducens motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000655 @@ -7761,9 +7762,9 @@ synonym: "tractus opticus dorsomedialis" EXACT [] xref: TAO:0000655 is_a: ZFA:0000338 ! diencephalic white matter is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000252 ! optic tract -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000656 @@ -7773,10 +7774,10 @@ def: "The ectopterygoid is dermal bone located at the anterior part of the palat synonym: "ectopterygoids" EXACT PLURAL [] xref: TAO:0000656 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000657 @@ -7787,11 +7788,11 @@ synonym: "endopterygoid" EXACT [] synonym: "mesopterygoid" EXACT [] xref: TAO:0000657 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005616 ! quadrate-entopterygoid joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000658 @@ -7802,9 +7803,9 @@ synonym: "epibranchial bones" EXACT PLURAL [] xref: TAO:0000658 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000660 @@ -7813,9 +7814,9 @@ namespace: zebrafish_anatomy def: "A free, modified neural spine of a preural or a ural vertebra that is placed between the last developed neural spine of a preural centrum and the dorsal axis (= anterior margin of first uroneural) of the caudal skeleton . An epural commonly supports one or more dorsal procurrent rays. An epural is an unpaired median perichondrally ossified bone." [TAO:curator] xref: TAO:0000660 is_a: ZFA:0001336 ! neural spine -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000661 @@ -7827,12 +7828,12 @@ xref: TAO:0000661 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: develops_from ZFA:0001504 ! occipital arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005423 ! basioccipital-exoccipital joint relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000662 @@ -7841,8 +7842,8 @@ namespace: zebrafish_anatomy synonym: "external pharyngoclavicularae" EXACT PLURAL [] xref: TAO:0000662 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000663 @@ -7854,9 +7855,9 @@ synonym: "supratemporal" EXACT [] synonym: "tabular" EXACT [] xref: TAO:0000663 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000664 @@ -7868,9 +7869,9 @@ synonym: "facial nerve" EXACT [] synonym: "nervus facialis" EXACT [] xref: TAO:0000664 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000665 @@ -7878,10 +7879,10 @@ name: rostral root of abducens nerve namespace: zebrafish_anatomy xref: TAO:0000665 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000310 ! cranial nerve VI relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000666 @@ -7891,10 +7892,10 @@ def: "Artery of the gill filament." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "filamental arteries" EXACT PLURAL [] xref: TAO:0000666 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000667 ! gill filament relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000667 @@ -7904,9 +7905,9 @@ def: "Portion of tissue that projects outward from the gill and is a thread-like synonym: "gill filaments" EXACT PLURAL [] xref: TAO:0000667 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000668 @@ -7918,9 +7919,9 @@ synonym: "glossopharyngeal nerve" EXACT [] synonym: "nervus glossopharyngeus" EXACT [] xref: TAO:0000668 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000669 @@ -7931,11 +7932,11 @@ synonym: "anterior kidney" EXACT [] synonym: "kidney marrow" EXACT [] xref: TAO:0000669 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000670 @@ -7945,9 +7946,9 @@ def: "Vein that carries blood away from the liver." [GOC:cvs, ORCiD:0000-0002-22 synonym: "hepatic veins" EXACT PLURAL [] xref: TAO:0000670 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000671 @@ -7957,8 +7958,8 @@ def: "A connective tissue partition developing at the apex of the chevron-shaped synonym: "horizontal septum" EXACT [] xref: TAO:0000671 is_a: ZFA:0001089 ! myoseptum -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000672 @@ -7969,11 +7970,11 @@ synonym: "hyomandibular" EXACT [] xref: TAO:0000672 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005469 ! hyomandibula-metapterygoid joint relationship: overlaps ZFA:0005632 ! preopercle vertical limb-hyomandibula joint relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000673 @@ -7984,8 +7985,8 @@ synonym: "HA" EXACT [] xref: TAO:0000673 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000674 @@ -7995,11 +7996,11 @@ def: "Dermal bone that is located anterior to the subopercle and lying below and synonym: "interopercles" EXACT PLURAL [] xref: TAO:0000674 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000676 @@ -8012,9 +8013,9 @@ synonym: "saccular otolith" EXACT [] synonym: "sacculith" EXACT [] xref: TAO:0000676 is_a: ZFA:0001617 ! otolith -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000428 ! saccule -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000677 @@ -8023,8 +8024,8 @@ namespace: zebrafish_anatomy synonym: "segmental intercostal arteries" EXACT PLURAL [] xref: TAO:0000677 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000678 @@ -8036,9 +8037,9 @@ synonym: "sensory hair cells anterior macula" EXACT PLURAL [] xref: TAO:0000678 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001098 ! immature hair cell anterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000168 ! anterior macula -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000679 @@ -8047,9 +8048,9 @@ namespace: zebrafish_anatomy synonym: "sensory roots of facial nerves" EXACT PLURAL [] xref: TAO:0000679 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000680 @@ -8060,10 +8061,10 @@ synonym: "sinoatrial valves" EXACT PLURAL [] xref: TAO:0000680 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000154 ! sinus venosus relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000681 @@ -8074,9 +8075,9 @@ synonym: "neural postzygapophyses" EXACT PLURAL [] synonym: "neural postzygopophysis" EXACT [] xref: TAO:0000681 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000682 @@ -8085,8 +8086,8 @@ namespace: zebrafish_anatomy synonym: "spinal arteries" EXACT PLURAL [] xref: TAO:0000682 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000683 @@ -8096,9 +8097,9 @@ def: "Diencephalic nucleus that is part of the synencephalon, is located adjacen synonym: "SCO" EXACT [] xref: TAO:0000683 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000684 @@ -8107,9 +8108,9 @@ namespace: zebrafish_anatomy def: "CNS white matter (commissure) that runs between the optic tectal hemispheres." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000684 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000685 @@ -8121,9 +8122,9 @@ synonym: "superficial abductors" EXACT PLURAL [] xref: TAO:0000685 is_a: ZFA:0005269 ! abductor muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000686 @@ -8133,9 +8134,9 @@ synonym: "superficial gray and white zone" EXACT [] synonym: "superficial grey and white zones" EXACT PLURAL [] xref: TAO:0000686 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000687 @@ -8145,9 +8146,9 @@ def: "Multi-tissue structure that is the superficial part of the pretectum and i xref: TAO:0000687 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005908 ! presumptive pretectum proliferative zone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000418 ! pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000688 @@ -8159,9 +8160,9 @@ subset: cell_slim synonym: "support cells" RELATED PLURAL [] xref: TAO:0000688 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0000689 @@ -8172,8 +8173,8 @@ synonym: "area ventralis telencephali, nucleus supracommissuralis" EXACT [] synonym: "supracommissural nucleus of V" EXACT [] xref: TAO:0000689 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000690 @@ -8181,8 +8182,8 @@ name: supraoptic commissure namespace: zebrafish_anatomy xref: TAO:0000690 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000691 @@ -8192,10 +8193,10 @@ def: "Paired dermal bones that form the anterodorsal margin of the orbit." [GOC: synonym: "supraorbital bones" EXACT PLURAL [] xref: TAO:0000691 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000692 @@ -8206,10 +8207,10 @@ synonym: "symplectics" EXACT PLURAL [] xref: TAO:0000692 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005631 ! preopercle horizontal limb-symplectic joint relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000693 @@ -8218,8 +8219,8 @@ namespace: zebrafish_anatomy def: "The tangential nucleus is located in rhombomere 5 and receives a dense utricular input. Tangential nucleus neurons project contralaterally to extraocular motoneurons and to multiple sites within the reticulospinal complex; unlike other classes of vestibular neuron, they modulate their firing in response to static head displacements." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120702-13, ZFIN:ZDB-PUB-160324-18] xref: TAO:0000693 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000694 @@ -8232,10 +8233,10 @@ synonym: "tooth" EXACT [] xref: TAO:0000694 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005138 ! dental organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001239 ! ceratobranchial 5 bone -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000695 @@ -8245,9 +8246,9 @@ def: "The anatomical space located between the lips and the oral valves." [GOC:m synonym: "labial cavities" EXACT PLURAL [] xref: TAO:0000695 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000696 @@ -8259,9 +8260,9 @@ synonym: "ventriculi telencephali " EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000696 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001259 ! forebrain ventricle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000697 @@ -8273,8 +8274,8 @@ synonym: "CN-V" EXACT [] synonym: "trigeminal nerve" EXACT [] xref: TAO:0000697 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000698 @@ -8284,10 +8285,10 @@ def: "The fourth Weberian ossicle. The tripus is a complex modification of the p xref: TAO:0000698 is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001169 ! vertebra 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000699 @@ -8304,10 +8305,10 @@ def: "Otolith organ comprised of the macula utricle and lapillus. The lagena is synonym: "utriculus" EXACT [] xref: TAO:0000700 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005409 ! pars superior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000701 @@ -8320,9 +8321,9 @@ synonym: "ventral arrectors" EXACT PLURAL [] xref: TAO:0000701 is_a: ZFA:0005275 ! arrector muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000702 @@ -8331,9 +8332,9 @@ namespace: zebrafish_anatomy synonym: "ventral horns spinal cord" EXACT PLURAL [] xref: TAO:0000702 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000703 @@ -8342,8 +8343,8 @@ namespace: zebrafish_anatomy def: "Trigeminal motor nucleus that is located at the ventrolateral edge of the lateral longitudinal fascicle." [ISBN:3764351209] xref: TAO:0000703 is_a: ZFA:0001365 ! trigeminal motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000704 @@ -8353,9 +8354,9 @@ def: "Deep, narrow muscle that arises anteriorly and laterally of the pelvic abd synonym: "ventral pelvic arrectors" EXACT PLURAL [] xref: TAO:0000704 is_a: ZFA:0005275 ! arrector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000705 @@ -8365,9 +8366,9 @@ def: "The efferent motor portion of the spinal nerve root." [http://en.wikipedia synonym: "ventral roots" EXACT PLURAL [] xref: TAO:0000705 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005578 ! spinal nerve root -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000706 @@ -8377,9 +8378,9 @@ def: "The posterior intestine has short longitudinally arranged epithelial folds xref: TAO:0000706 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000707 @@ -8388,9 +8389,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure which is the ventral region of the median tuberal portion of the hypothalamus and is the most rostral region of the hypothalamus. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000707 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000392 ! median tuberal portion -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000708 @@ -8399,9 +8400,9 @@ namespace: zebrafish_anatomy synonym: "ventrolateral optic tracts" EXACT PLURAL [] xref: TAO:0000708 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000252 ! optic tract -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000709 @@ -8410,8 +8411,8 @@ namespace: zebrafish_anatomy synonym: "vestibulo-spinal tracts" EXACT PLURAL [] xref: TAO:0000709 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000710 @@ -8421,9 +8422,9 @@ synonym: "commissural nucleus of Cajal" EXACT [] synonym: "nucleus commissuralis Cajal" EXACT [] xref: TAO:0000710 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000711 @@ -8435,9 +8436,9 @@ synonym: "DEL cells" EXACT PLURAL [] xref: TAO:0000711 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001473 ! deep blastomere -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000712 @@ -8447,9 +8448,9 @@ def: "The portion of the YSL that lies deep to the blastoderm during epiboly." [ synonym: "I-YSL" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000712 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000013 ! Blastula:Oblong +relationship: start ZFS:0000013 ! blastula:oblong [Term] id: ZFA:0000713 @@ -8462,9 +8463,9 @@ synonym: "motor nucleus VI" EXACT [] synonym: "nVI" EXACT [] xref: TAO:0000713 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000714 @@ -8475,9 +8476,9 @@ synonym: "APN" EXACT [] synonym: "nucleus praetectalis accessorius" EXACT [] xref: TAO:0000714 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000715 @@ -8488,9 +8489,9 @@ synonym: "adductors hyohyoid" EXACT PLURAL [] synonym: "hyohyoidei adductores" EXACT [] xref: TAO:0000715 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007052 ! hyohyoideus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000716 @@ -8500,10 +8501,10 @@ def: "Artery that is part of the pharyngeal arches 3-5, and forms the afferent p synonym: "ABA" EXACT [] xref: TAO:0000716 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000717 @@ -8512,9 +8513,9 @@ namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000717 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000718 @@ -8523,9 +8524,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 27 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000718 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000719 @@ -8536,9 +8537,9 @@ subset: cell_slim synonym: "slow muscle cells somite 21" EXACT PLURAL [] xref: TAO:0000719 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000720 @@ -8549,9 +8550,9 @@ subset: cell_slim synonym: "slow muscle cells somite 24" EXACT PLURAL [] xref: TAO:0000720 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000721 @@ -8562,9 +8563,9 @@ subset: cell_slim synonym: "slow muscle cells somite 27" EXACT PLURAL [] xref: TAO:0000721 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000722 @@ -8575,9 +8576,9 @@ subset: cell_slim synonym: "slow muscle cells somite 3" EXACT PLURAL [] xref: TAO:0000722 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000723 @@ -8588,9 +8589,9 @@ subset: cell_slim synonym: "slow muscle cells somite 5" EXACT PLURAL [] xref: TAO:0000723 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000724 @@ -8601,9 +8602,9 @@ subset: cell_slim synonym: "slow muscle cells somite 8" EXACT PLURAL [] xref: TAO:0000724 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000725 @@ -8612,8 +8613,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 11 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000725 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000726 @@ -8622,8 +8623,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 14 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000726 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000727 @@ -8632,8 +8633,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 17 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000727 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000728 @@ -8642,8 +8643,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 2 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000728 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000729 @@ -8652,9 +8653,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 3 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000729 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000730 @@ -8663,8 +8664,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 23 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000730 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000731 @@ -8673,8 +8674,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 27 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000731 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000732 @@ -8683,8 +8684,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 3 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000732 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000733 @@ -8693,8 +8694,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 7 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000733 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000734 @@ -8705,9 +8706,9 @@ synonym: "caudal fin vertebra" EXACT [] synonym: "specialized centra/vertebrae" EXACT PLURAL [] xref: TAO:0000734 is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000735 @@ -8719,9 +8720,9 @@ synonym: "hemal postzygapophyses" EXACT PLURAL [] synonym: "hemal postzygopophysis" EXACT [] xref: TAO:0000735 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000519 ! hemal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000737 @@ -8731,9 +8732,9 @@ def: "Skeletal system that is part of the head, including the splanchnocranium, synonym: "cranial skeleton" EXACT [] xref: TAO:0000737 is_a: ZFA:0000434 ! skeletal system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000738 @@ -8745,9 +8746,9 @@ synonym: "dorsal oblique extraocular muscles" EXACT PLURAL [] synonym: "superior oblique muscle" EXACT [ZFIN:ZDB-PUB-110512-18] xref: TAO:0000738 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000739 @@ -8756,9 +8757,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 11 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000739 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000740 @@ -8767,9 +8768,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 5 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000740 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000741 @@ -8778,9 +8779,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 14 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000741 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000742 @@ -8789,9 +8790,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 17 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000742 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000743 @@ -8800,9 +8801,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 2 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000743 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000744 @@ -8811,9 +8812,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 22 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000744 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000745 @@ -8822,9 +8823,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 25 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000745 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000746 @@ -8833,9 +8834,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 28 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000746 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000747 @@ -8844,9 +8845,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 30 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000747 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000748 @@ -8855,9 +8856,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 6 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000748 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000749 @@ -8866,9 +8867,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 9 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000749 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000750 @@ -8880,9 +8881,9 @@ synonym: "fast muscle cells somite 10" EXACT PLURAL [] synonym: "fast muscle fiber somite 10" EXACT [] xref: TAO:0000750 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000751 @@ -8891,9 +8892,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 8 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000751 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000752 @@ -8905,9 +8906,9 @@ synonym: "fast muscle cells somite 13" EXACT PLURAL [] synonym: "fast muscle fiber somite 13" EXACT [] xref: TAO:0000752 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000753 @@ -8919,9 +8920,9 @@ synonym: "fast muscle cells somite 16" EXACT PLURAL [] synonym: "fast muscle fiber somite 16" EXACT [] xref: TAO:0000753 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000754 @@ -8933,9 +8934,9 @@ synonym: "fast muscle cells somite 19" EXACT PLURAL [] synonym: "fast muscle fiber somite 19" EXACT [] xref: TAO:0000754 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000755 @@ -8947,9 +8948,9 @@ synonym: "fast muscle cells somite 21" EXACT PLURAL [] synonym: "fast muscle fiber somite 21" EXACT [] xref: TAO:0000755 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000756 @@ -8961,9 +8962,9 @@ synonym: "fast muscle cells somite 24" EXACT PLURAL [] synonym: "fast muscle fiber somite 24" EXACT [] xref: TAO:0000756 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000757 @@ -8975,9 +8976,9 @@ synonym: "fast muscle cells somite 27" EXACT PLURAL [] synonym: "fast muscle fiber somite 27" EXACT [] xref: TAO:0000757 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000758 @@ -8989,9 +8990,9 @@ synonym: "fast muscle cells somite 3" EXACT PLURAL [] synonym: "fast muscle fiber somite 3" EXACT [] xref: TAO:0000758 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000759 @@ -9003,9 +9004,9 @@ synonym: "fast muscle cells somite 5" EXACT PLURAL [] synonym: "fast muscle fiber somite 5" EXACT [] xref: TAO:0000759 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000760 @@ -9017,9 +9018,9 @@ synonym: "fast muscle cells somite 8" EXACT PLURAL [] synonym: "fast muscle fiber somite 8" EXACT [] xref: TAO:0000760 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000761 @@ -9030,9 +9031,9 @@ synonym: "floor plate midbrain" RELATED [] synonym: "floorplate midbrain" RELATED [] xref: TAO:0000761 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000762 @@ -9042,8 +9043,8 @@ def: "Cranial neural crest that gives rise to the facio-acoustic ganglion." [GOC synonym: "facio acoustic neural crest" EXACT [] xref: TAO:0000762 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000763 @@ -9054,10 +9055,10 @@ synonym: "floor plate r2" EXACT [] synonym: "floorplate r2" EXACT [] xref: TAO:0000763 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000764 @@ -9068,10 +9069,10 @@ synonym: "floor plate r5" EXACT [] synonym: "floorplate r5" EXACT [] xref: TAO:0000764 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000765 @@ -9082,10 +9083,10 @@ synonym: "floor plate r8" EXACT [] synonym: "floorplate r8" EXACT [] xref: TAO:0000765 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000766 @@ -9094,9 +9095,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is part of the valvula cerebelli and consists largely of axons and dendrites." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000766 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000767 @@ -9105,9 +9106,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 11 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000767 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000768 @@ -9116,9 +9117,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 14 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000768 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000769 @@ -9127,9 +9128,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 17 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000769 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000770 @@ -9138,9 +9139,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 2 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000770 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000771 @@ -9149,9 +9150,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 22 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000771 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000772 @@ -9160,9 +9161,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 25 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000772 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000773 @@ -9174,9 +9175,9 @@ synonym: "fast muscle cells somite 12" EXACT PLURAL [] synonym: "fast muscle fiber somite 12" EXACT [] xref: TAO:0000773 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000774 @@ -9186,9 +9187,9 @@ def: "The hypaxial region of somite 28 derived body wall muscle. The hypaxial re subset: cell_slim xref: TAO:0000774 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000775 @@ -9198,9 +9199,9 @@ def: "The hypaxial region of somite 30 derived body wall muscle. The hypaxial re subset: cell_slim xref: TAO:0000775 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000776 @@ -9209,9 +9210,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 6 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000776 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000777 @@ -9220,9 +9221,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 9 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000777 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000778 @@ -9234,9 +9235,9 @@ synonym: "interneurons spinal cord" EXACT PLURAL [] xref: CL:0005000 xref: TAO:0000778 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000779 @@ -9246,9 +9247,9 @@ def: "Portion of the lateral forebrain bundle that lies in the telencephalon." [ synonym: "lateral forebrain bundles telencephalon" EXACT PLURAL [] xref: TAO:0000779 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007012 ! lateral forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000780 @@ -9258,9 +9259,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the diencephalic synonym: "lateral wall diencephalon" EXACT [] xref: TAO:0000780 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000781 @@ -9269,9 +9270,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 1." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000781 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000782 @@ -9280,9 +9281,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000782 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000783 @@ -9291,9 +9292,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000783 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000949 ! rhombomere 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000784 @@ -9305,9 +9306,9 @@ synonym: "fast muscle cells somite 15" EXACT PLURAL [] synonym: "fast muscle fiber somite 15" EXACT [] xref: TAO:0000784 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000785 @@ -9317,9 +9318,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the telencephalic synonym: "lateral wall telencephalon" EXACT [] xref: TAO:0000785 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000786 @@ -9327,9 +9328,9 @@ name: medial migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000786 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000787 @@ -9337,8 +9338,8 @@ name: mesenchyme derived from head neural crest namespace: zebrafish_anatomy xref: TAO:0000787 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000788 @@ -9347,9 +9348,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme part of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000788 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000789 @@ -9359,9 +9360,9 @@ def: "Mesoderm that is part of the pectoral fin bud." [GOC:mh, ORCiD:0000-0001-9 synonym: "mesoderm pectoral fin buds" EXACT PLURAL [] xref: TAO:0000789 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000790 @@ -9372,9 +9373,9 @@ subset: cell_slim synonym: "muscle pioneers somite 10" EXACT PLURAL [] xref: TAO:0000790 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000791 @@ -9385,9 +9386,9 @@ subset: cell_slim synonym: "muscle pioneers somite 13" EXACT PLURAL [] xref: TAO:0000791 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000792 @@ -9398,9 +9399,9 @@ subset: cell_slim synonym: "muscle pioneers somite 16" EXACT PLURAL [] xref: TAO:0000792 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000793 @@ -9411,9 +9412,9 @@ subset: cell_slim synonym: "muscle pioneers somite 19" EXACT PLURAL [] xref: TAO:0000793 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000794 @@ -9424,9 +9425,9 @@ subset: cell_slim synonym: "muscle pioneers somite 22" EXACT PLURAL [] xref: TAO:0000794 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000795 @@ -9438,9 +9439,9 @@ synonym: "fast muscle cells somite 18" EXACT PLURAL [] synonym: "fast muscle fiber somite 18" EXACT [] xref: TAO:0000795 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000796 @@ -9451,9 +9452,9 @@ subset: cell_slim synonym: "muscle pioneers somite 25" EXACT PLURAL [] xref: TAO:0000796 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000797 @@ -9464,9 +9465,9 @@ subset: cell_slim synonym: "muscle pioneers somite 28" EXACT PLURAL [] xref: TAO:0000797 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000798 @@ -9477,9 +9478,9 @@ subset: cell_slim synonym: "muscle pioneers somite 30" EXACT PLURAL [] xref: TAO:0000798 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000799 @@ -9490,9 +9491,9 @@ subset: cell_slim synonym: "muscle pioneers somite 6" EXACT PLURAL [] xref: TAO:0000799 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000800 @@ -9503,9 +9504,9 @@ subset: cell_slim synonym: "muscle pioneers somite 9" EXACT PLURAL [] xref: TAO:0000800 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000801 @@ -9515,9 +9516,9 @@ def: "Portion of somite 11 that gives rise to body wall muscle masses." [ZFIN:ZD subset: cell_slim xref: TAO:0000801 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000802 @@ -9527,9 +9528,9 @@ def: "Portion of somite 15 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000802 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000803 @@ -9539,9 +9540,9 @@ def: "Portion of somite 18 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000803 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000804 @@ -9551,9 +9552,9 @@ def: "Portion of somite 20 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000804 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000805 @@ -9563,9 +9564,9 @@ def: "Portion of somite 23 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000805 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000806 @@ -9577,21 +9578,21 @@ synonym: "fast muscle cells somite 20" EXACT PLURAL [] synonym: "fast muscle fiber somite 20" EXACT [] xref: TAO:0000806 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000807 name: myotome somite 26 namespace: zebrafish_anatomy -def: "Portion of somite 16 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] +def: "Portion of somite 26 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] subset: cell_slim xref: TAO:0000807 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000808 @@ -9601,9 +9602,9 @@ def: "Portion of somite 29 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000808 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000809 @@ -9613,9 +9614,9 @@ def: "Portion of somite 4 that gives rise to body wall muscle masses." [GOC:ymb, subset: cell_slim xref: TAO:0000809 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000810 @@ -9625,9 +9626,9 @@ def: "Portion of somite 7 that gives rise to body wall muscle masses." [GOC:ymb, subset: cell_slim xref: TAO:0000810 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000811 @@ -9637,8 +9638,8 @@ def: "Cranial neural crest that is part of the diencephalon." [GOC:ymb, ORCiD:00 synonym: "diencephalic neural crest" EXACT [] xref: TAO:0000811 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000812 @@ -9647,8 +9648,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that is part of the telencephalon." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0000812 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000813 @@ -9659,9 +9660,9 @@ synonym: "neuromast infraorbital" EXACT [] synonym: "neuromasts infraorbital" EXACT PLURAL [] xref: TAO:0000813 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000524 ! infraorbital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000814 @@ -9672,9 +9673,9 @@ synonym: "neuromast opercular" EXACT [] synonym: "neuromasts opercular" EXACT PLURAL [] xref: TAO:0000814 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000424 ! opercular lateral line -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000815 @@ -9682,9 +9683,9 @@ name: nucleus of the medial longitudinal fasciculus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000815 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000816 @@ -9693,9 +9694,9 @@ namespace: zebrafish_anatomy def: "The epithelium that lines the oral cavity. The oral epithelium epithelial cells with many short microvilli as well as mucous cells, rodlet cells and taste buds." [ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24] xref: TAO:0000816 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000817 @@ -9707,9 +9708,9 @@ synonym: "fast muscle cells somite 23" EXACT PLURAL [] synonym: "fast muscle fiber somite 23" EXACT [] xref: TAO:0000817 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000818 @@ -9719,8 +9720,8 @@ def: "Vagal neural crest is adjacent to the first seven somites gives rise to bo synonym: "post-otic neural crest" EXACT [] xref: TAO:0000818 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000819 @@ -9731,8 +9732,8 @@ synonym: "area ventralis telencephali, nucleus postcommissuralis" EXACT [] synonym: "postcommissural nucleus of V" EXACT [] xref: TAO:0000819 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000820 @@ -9751,8 +9752,8 @@ subset: cell_slim synonym: "primary neurons hindbrain" EXACT PLURAL [] xref: TAO:0000821 is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000822 @@ -9763,8 +9764,8 @@ synonym: "r2" EXACT [] xref: TAO:0000822 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001208 ! presumptive rhombomere 2 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000823 @@ -9775,8 +9776,8 @@ synonym: "r5" EXACT [] xref: TAO:0000823 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001211 ! presumptive rhombomere 5 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000824 @@ -9785,10 +9786,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 2." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000824 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000825 @@ -9797,10 +9798,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000825 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000826 @@ -9811,9 +9812,9 @@ synonym: "central nucleus of semicircular torus" EXACT [] synonym: "nucleus centralis tori semicircularis" EXACT [] xref: TAO:0000826 is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000599 ! torus semicircularis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000827 @@ -9825,9 +9826,9 @@ synonym: "fast muscle cells somite 26" EXACT PLURAL [] synonym: "fast muscle fiber somite 26" EXACT [] xref: TAO:0000827 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000828 @@ -9836,10 +9837,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000828 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000829 @@ -9848,9 +9849,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 11 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000829 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000830 @@ -9859,9 +9860,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 14 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000830 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000831 @@ -9870,9 +9871,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 17 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000831 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000832 @@ -9881,9 +9882,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 2 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000832 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000833 @@ -9892,9 +9893,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 22 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000833 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000834 @@ -9903,9 +9904,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 25 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000834 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000835 @@ -9914,9 +9915,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 28 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000835 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000836 @@ -9925,9 +9926,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 30 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000836 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000837 @@ -9936,9 +9937,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 6 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000837 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000838 @@ -9950,9 +9951,9 @@ synonym: "fast muscle cells somite 29" EXACT PLURAL [] synonym: "fast muscle fiber somite 29" EXACT [] xref: TAO:0000838 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000839 @@ -9961,9 +9962,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 9 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000839 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000840 @@ -9974,9 +9975,9 @@ subset: cell_slim synonym: "slow muscle cells somite 11" EXACT PLURAL [] xref: TAO:0000840 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000841 @@ -9987,9 +9988,9 @@ subset: cell_slim synonym: "slow muscle cells somite 14" EXACT PLURAL [] xref: TAO:0000841 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000842 @@ -10000,9 +10001,9 @@ subset: cell_slim synonym: "slow muscle cells somite 17" EXACT PLURAL [] xref: TAO:0000842 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000843 @@ -10013,9 +10014,9 @@ subset: cell_slim synonym: "slow muscle cells somite 2" EXACT PLURAL [] xref: TAO:0000843 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000844 @@ -10026,9 +10027,9 @@ subset: cell_slim synonym: "slow muscle cells somite 22" EXACT PLURAL [] xref: TAO:0000844 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000845 @@ -10039,9 +10040,9 @@ subset: cell_slim synonym: "slow muscle cells somite 25" EXACT PLURAL [] xref: TAO:0000845 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000846 @@ -10052,9 +10053,9 @@ subset: cell_slim synonym: "slow muscle cells somite 28" EXACT PLURAL [] xref: TAO:0000846 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000847 @@ -10065,9 +10066,9 @@ subset: cell_slim synonym: "slow muscle cells somite 30" EXACT PLURAL [] xref: TAO:0000847 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000848 @@ -10078,9 +10079,9 @@ subset: cell_slim synonym: "slow muscle cells somite 6" EXACT PLURAL [] xref: TAO:0000848 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000849 @@ -10092,9 +10093,9 @@ synonym: "fast muscle cells somite 4" EXACT PLURAL [] synonym: "fast muscle fiber somite 4" EXACT [] xref: TAO:0000849 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000850 @@ -10105,9 +10106,9 @@ subset: cell_slim synonym: "slow muscle cells somite 9" EXACT PLURAL [] xref: TAO:0000850 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000851 @@ -10116,8 +10117,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 12 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000851 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000852 @@ -10126,8 +10127,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 15 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000852 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000853 @@ -10136,8 +10137,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 18 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000853 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000854 @@ -10146,8 +10147,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail 21 segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000854 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000855 @@ -10156,8 +10157,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 24 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000855 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000856 @@ -10166,8 +10167,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 28 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000856 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000857 @@ -10176,8 +10177,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 4 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000857 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000858 @@ -10186,8 +10187,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 8 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000858 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000859 @@ -10200,9 +10201,9 @@ synonym: "specialized haemal arch and spine" EXACT [] synonym: "specialized hemal arches and spines" EXACT PLURAL [] xref: TAO:0000859 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000860 @@ -10214,9 +10215,9 @@ synonym: "fast muscle cells somite 7" EXACT PLURAL [] synonym: "fast muscle fiber somite 7" EXACT [] xref: TAO:0000860 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000861 @@ -10228,9 +10229,9 @@ synonym: "inferior oblique muscle" EXACT [ZFIN:ZDB-PUB-110512-18] synonym: "ventral oblique extraocular muscles" EXACT PLURAL [] xref: TAO:0000861 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000862 @@ -10239,9 +10240,9 @@ namespace: zebrafish_anatomy def: "Median fin skeleton supporting the caudal fin." [TAO:curator] xref: TAO:0000862 is_a: ZFA:0001123 ! axial fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000863 @@ -10251,9 +10252,9 @@ def: "Anatomical cluster that is part of the cranium and composed of dermally de synonym: "dermal bone cranium" EXACT [] xref: TAO:0000863 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000864 @@ -10262,9 +10263,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 1 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000864 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000865 @@ -10273,9 +10274,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 12 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000865 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000866 @@ -10284,9 +10285,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 15 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000866 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000867 @@ -10295,9 +10296,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 18 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000867 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000868 @@ -10306,9 +10307,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 20 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000868 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000869 @@ -10317,9 +10318,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 23 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000869 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000870 @@ -10328,9 +10329,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 26 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000870 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000871 @@ -10340,10 +10341,10 @@ def: "Floor plate that is part of the diencephalon." [GOC:mh, ORCiD:0000-0001-91 synonym: "floorplate diencephalon" EXACT [] xref: TAO:0000871 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000872 @@ -10352,9 +10353,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 29 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000872 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000873 @@ -10363,9 +10364,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 4 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000873 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000874 @@ -10374,9 +10375,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 7 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000874 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000875 @@ -10397,9 +10398,9 @@ synonym: "fast muscle cells somite 11" EXACT PLURAL [] synonym: "fast muscle fiber somite 11" EXACT [] xref: TAO:0000876 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000877 @@ -10411,9 +10412,9 @@ synonym: "fast muscle cells somite 14" EXACT PLURAL [] synonym: "fast muscle fiber somite 14" EXACT [] xref: TAO:0000877 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000878 @@ -10425,9 +10426,9 @@ synonym: "fast muscle cells somite 17" EXACT PLURAL [] synonym: "fast muscle fiber somite 17" EXACT [] xref: TAO:0000878 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000879 @@ -10439,9 +10440,9 @@ synonym: "fast muscle cells somite 2" EXACT PLURAL [] synonym: "fast muscle fiber somite 2" EXACT [] xref: TAO:0000879 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000880 @@ -10453,9 +10454,9 @@ synonym: "fast muscle cells somite 22" EXACT PLURAL [] synonym: "fast muscle fiber somite 22" EXACT [] xref: TAO:0000880 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000881 @@ -10467,9 +10468,9 @@ synonym: "fast muscle cells somite 25" EXACT PLURAL [] synonym: "fast muscle fiber somite 25" EXACT [] xref: TAO:0000881 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000882 @@ -10479,10 +10480,10 @@ def: "Floor plate that is part of the rhombomere 1." [GOC:mh, ORCiD:0000-0001-91 synonym: "floor plate r1" EXACT [] xref: TAO:0000882 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000883 @@ -10494,9 +10495,9 @@ synonym: "fast muscle cells somite 28" EXACT PLURAL [] synonym: "fast muscle fiber somite 28" EXACT [] xref: TAO:0000883 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000884 @@ -10508,9 +10509,9 @@ synonym: "fast muscle cells somite 30" EXACT PLURAL [] synonym: "fast muscle fiber somite 30" EXACT [] xref: TAO:0000884 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000885 @@ -10522,9 +10523,9 @@ synonym: "fast muscle cells somite 6" EXACT PLURAL [] synonym: "fast muscle fiber somite 6" EXACT [] xref: TAO:0000885 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000886 @@ -10536,9 +10537,9 @@ synonym: "fast muscle cells somite 9" EXACT PLURAL [] synonym: "fast muscle fiber somite 9" EXACT [] xref: TAO:0000886 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000887 @@ -10548,10 +10549,10 @@ def: "Floor plate that is part of the neural rod." [GOC:mh, GOC:ymb, ORCiD:0000- synonym: "floorplate neural rod" EXACT [] xref: TAO:0000887 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000888 @@ -10562,10 +10563,10 @@ synonym: "floor plate r3" EXACT [] synonym: "floorplate r3" EXACT [] xref: TAO:0000888 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000889 @@ -10576,10 +10577,10 @@ synonym: "floor plate r6" EXACT [] synonym: "floorplate r6" EXACT [] xref: TAO:0000889 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000890 @@ -10590,10 +10591,10 @@ synonym: "floorplate spinal cord" EXACT [] xref: TAO:0000890 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001434 ! floor plate neural tube -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000891 @@ -10602,9 +10603,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 1 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000891 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000892 @@ -10613,9 +10614,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 12 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000892 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000893 @@ -10626,10 +10627,10 @@ synonym: "floor plate r4" EXACT [] synonym: "floorplate r4" EXACT [] xref: TAO:0000893 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000894 @@ -10638,9 +10639,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 15 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000894 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000895 @@ -10649,9 +10650,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 18 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000895 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000896 @@ -10660,9 +10661,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 20 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000896 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000897 @@ -10671,9 +10672,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 23 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000897 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000898 @@ -10682,9 +10683,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 26 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000898 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000899 @@ -10693,9 +10694,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 29 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000899 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000900 @@ -10704,9 +10705,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 4 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000900 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000901 @@ -10715,9 +10716,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 7 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000901 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000902 @@ -10727,9 +10728,9 @@ def: "Musculature associated with the hypurals." [GOC:cvs, ORCiD:0000-0002-2244- synonym: "hypural muscles" EXACT PLURAL [] xref: TAO:0000902 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000628 ! caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000903 @@ -10738,9 +10739,9 @@ namespace: zebrafish_anatomy comment: ZDB-PUB-010601-11 says there are 4 sub-nuclei. xref: TAO:0000903 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000904 @@ -10751,10 +10752,10 @@ synonym: "floor plate r7" EXACT [] synonym: "floorplate r7" EXACT [] xref: TAO:0000904 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000905 @@ -10762,8 +10763,8 @@ name: lateral mesenchyme derived from mesoderm namespace: zebrafish_anatomy xref: TAO:0000905 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000906 @@ -10773,9 +10774,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the midbrain regi synonym: "lateral wall midbrain" EXACT [] xref: TAO:0000906 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000907 @@ -10784,9 +10785,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 2." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000907 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000908 @@ -10795,9 +10796,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000908 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000909 @@ -10806,9 +10807,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000909 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000153 ! rhombomere 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000910 @@ -10817,9 +10818,9 @@ namespace: zebrafish_anatomy synonym: "medial forebrain bundles telencephalon" EXACT PLURAL [] xref: TAO:0000910 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005111 ! medial forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000911 @@ -10835,9 +10836,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme part of median fin fold." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000912 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000913 @@ -10846,9 +10847,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is part of the valvula cerebelli and contains neuronal cell bodies." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000913 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000914 @@ -10858,10 +10859,10 @@ def: "Floor plate that is part of the telencephalon." [GOC:mh, ORCiD:0000-0001-9 synonym: "floorplate telencephalon" EXACT [] xref: TAO:0000914 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000915 @@ -10872,9 +10873,9 @@ subset: cell_slim synonym: "muscle pioneers somite 11" EXACT PLURAL [] xref: TAO:0000915 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000916 @@ -10885,9 +10886,9 @@ subset: cell_slim synonym: "muscle pioneers somite 14" EXACT PLURAL [] xref: TAO:0000916 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000917 @@ -10898,9 +10899,9 @@ subset: cell_slim synonym: "muscle pioneers somite 17" EXACT PLURAL [] xref: TAO:0000917 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000918 @@ -10911,9 +10912,9 @@ subset: cell_slim synonym: "muscle pioneers somite 20" EXACT PLURAL [] xref: TAO:0000918 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000919 @@ -10924,9 +10925,9 @@ subset: cell_slim synonym: "muscle pioneers somite 23" EXACT PLURAL [] xref: TAO:0000919 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000920 @@ -10937,9 +10938,9 @@ subset: cell_slim synonym: "muscle pioneers somite 26" EXACT PLURAL [] xref: TAO:0000920 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000921 @@ -10950,9 +10951,9 @@ subset: cell_slim synonym: "muscle pioneers somite 29" EXACT PLURAL [] xref: TAO:0000921 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000922 @@ -10963,9 +10964,9 @@ subset: cell_slim synonym: "muscle pioneers somite 4" EXACT PLURAL [] xref: TAO:0000922 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000923 @@ -10976,9 +10977,9 @@ subset: cell_slim synonym: "muscle pioneers somite 7" EXACT PLURAL [] xref: TAO:0000923 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000924 @@ -10987,9 +10988,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 1 that gives rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000924 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000072 ! somite 1 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000925 @@ -10998,9 +10999,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 10 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000925 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000926 @@ -11009,9 +11010,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 12 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000926 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000927 @@ -11020,9 +11021,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 16 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000927 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000928 @@ -11031,9 +11032,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 19 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000928 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000929 @@ -11042,9 +11043,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 21 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000929 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000930 @@ -11053,9 +11054,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 24 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000930 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000931 @@ -11064,9 +11065,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 27 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000931 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000932 @@ -11075,9 +11076,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 3 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000932 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000933 @@ -11086,9 +11087,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 5 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000933 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000934 @@ -11097,9 +11098,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 8 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000934 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000935 @@ -11109,8 +11110,8 @@ def: "Neural crest that is part of the midbrain." [GOC:ymb, ORCiD:0000-0002-9900 synonym: "mesencephalic neural crest" EXACT [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0000935 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000936 @@ -11120,9 +11121,9 @@ def: "Rod-like internal median skeletal support bones of the dorsal fin, which a synonym: "dorsal fin distal radials" EXACT PLURAL [] xref: TAO:0000936 is_a: ZFA:0001647 ! dorsal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000937 @@ -11131,9 +11132,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 13 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000937 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000938 @@ -11144,10 +11145,10 @@ synonym: "canalis centralis" EXACT [] synonym: "neural lumen" EXACT [] xref: TAO:0000938 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000939 @@ -11158,9 +11159,9 @@ synonym: "neuromast middle" EXACT [] synonym: "neuromasts middle" EXACT PLURAL [] xref: TAO:0000939 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000344 ! middle lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000940 @@ -11172,9 +11173,9 @@ synonym: "neuromasts posterior" EXACT PLURAL [] xref: TAO:0000940 is_a: ZFA:0000243 ! neuromast relationship: develops_from ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000944 ! posterior lateral line -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000941 @@ -11184,9 +11185,9 @@ def: "Diencephalic nucleus that is part of the synencephalon, is located adjacen xref: TAO:0000941 is_a: ZFA:0001659 ! diencephalic nucleus relationship: develops_from ZFA:0005871 ! region of the nucleus of the medial longitudinal fascicle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000943 @@ -11195,22 +11196,24 @@ namespace: zebrafish_anatomy def: "Skeleton that consists of the supporting endochondral proximal and distal radials and the dermal fins rays or lepidotrichia. The pectoral fin skeleton is located in the thoracic region of the body and articulates with the scapula and coracoid." [TAO:curator] xref: TAO:0000943 is_a: ZFA:0000027 ! paired fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000944 name: posterior lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880] +def: "One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-110811-14] +synonym: "midbody lateral line" RELATED [] +synonym: "midtrunk line" RELATED [] synonym: "pll" EXACT [] xref: TAO:0000944 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000946 @@ -11219,9 +11222,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 16 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000946 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000947 @@ -11231,9 +11234,9 @@ def: "Rod-like internal median skeletal support bones of the dorsal fin, which a synonym: "dorsal fin proximal radials" EXACT PLURAL [] xref: TAO:0000947 is_a: ZFA:0001647 ! dorsal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000948 @@ -11244,8 +11247,8 @@ synonym: "r3" EXACT [] xref: TAO:0000948 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001213 ! presumptive rhombomere 3 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000949 @@ -11256,8 +11259,8 @@ synonym: "r7" EXACT [] xref: TAO:0000949 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001209 ! presumptive rhombomere 7 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000950 @@ -11266,10 +11269,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 3." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000950 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000951 @@ -11278,10 +11281,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000951 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000952 @@ -11290,9 +11293,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 1 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000952 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000072 ! somite 1 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000953 @@ -11301,9 +11304,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 12 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000953 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000954 @@ -11312,9 +11315,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 15 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000954 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000955 @@ -11323,9 +11326,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 18 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000955 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000956 @@ -11334,9 +11337,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 20 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000956 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000957 @@ -11345,9 +11348,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 19 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000957 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000958 @@ -11356,9 +11359,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 23 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000958 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000959 @@ -11367,9 +11370,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 26 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000959 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000960 @@ -11378,9 +11381,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 29 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000960 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000961 @@ -11389,9 +11392,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 4 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000961 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000962 @@ -11400,9 +11403,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 7 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000962 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000963 @@ -11413,9 +11416,9 @@ subset: cell_slim synonym: "slow muscle cells somite 1" EXACT PLURAL [] xref: TAO:0000963 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000964 @@ -11426,9 +11429,9 @@ subset: cell_slim synonym: "slow muscle cells somite 12" EXACT PLURAL [] xref: TAO:0000964 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000965 @@ -11439,9 +11442,9 @@ subset: cell_slim synonym: "slow muscle cells somite 15" EXACT PLURAL [] xref: TAO:0000965 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000966 @@ -11452,9 +11455,9 @@ subset: cell_slim synonym: "slow muscle cells somite 18" EXACT PLURAL [] xref: TAO:0000966 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000967 @@ -11465,9 +11468,9 @@ subset: cell_slim synonym: "slow muscle cells somite 20" EXACT PLURAL [] xref: TAO:0000967 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000968 @@ -11476,9 +11479,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 21 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000968 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000969 @@ -11489,9 +11492,9 @@ subset: cell_slim synonym: "slow muscle cells somite 23" EXACT PLURAL [] xref: TAO:0000969 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000970 @@ -11502,9 +11505,9 @@ subset: cell_slim synonym: "slow muscle cells somite 26" EXACT PLURAL [] xref: TAO:0000970 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000971 @@ -11515,9 +11518,9 @@ subset: cell_slim synonym: "slow muscle cells somite 29" EXACT PLURAL [] xref: TAO:0000971 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000972 @@ -11528,9 +11531,9 @@ subset: cell_slim synonym: "slow muscle cells somite 4" EXACT PLURAL [] xref: TAO:0000972 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000973 @@ -11541,9 +11544,9 @@ subset: cell_slim synonym: "slow muscle cells somite 7" EXACT PLURAL [] xref: TAO:0000973 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000974 @@ -11552,8 +11555,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 10 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000974 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000975 @@ -11562,8 +11565,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 13 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000975 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000976 @@ -11572,8 +11575,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 16 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000976 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000977 @@ -11582,8 +11585,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 19 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000977 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000978 @@ -11592,8 +11595,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 22 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000978 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000979 @@ -11602,9 +11605,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 24 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000979 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000980 @@ -11613,8 +11616,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 25 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000980 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000981 @@ -11623,8 +11626,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 29 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000981 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000982 @@ -11633,8 +11636,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 6 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000982 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000983 @@ -11643,8 +11646,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 9 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000983 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000984 @@ -11652,9 +11655,9 @@ name: superior reticular formation tegmentum namespace: zebrafish_anatomy xref: TAO:0000984 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000985 @@ -11662,9 +11665,9 @@ name: ventral rhombencephalic commissure medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000985 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000986 @@ -11673,9 +11676,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 27 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000986 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000987 @@ -11684,9 +11687,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 3 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000987 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000988 @@ -11695,9 +11698,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 5 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000988 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000989 @@ -11706,9 +11709,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 8 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000989 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000990 @@ -11716,8 +11719,8 @@ name: intermediate mesenchyme namespace: zebrafish_anatomy xref: TAO:0000990 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000991 @@ -11726,9 +11729,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 10 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000991 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000992 @@ -11736,9 +11739,9 @@ name: lateral migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000992 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000993 @@ -11747,9 +11750,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue located at either side of the neural rod." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000993 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000994 @@ -11758,9 +11761,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 3." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000994 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000995 @@ -11769,9 +11772,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000995 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000996 @@ -11780,9 +11783,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the spinal cord." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000996 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000997 @@ -11792,8 +11795,8 @@ def: "Sensory trigeminal nucleus located at the end of the medulla oblongata." [ synonym: "medial funicular nucleus trigeminal nuclei" EXACT PLURAL [] xref: TAO:0000997 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000998 @@ -11801,8 +11804,8 @@ name: mesenchyme derived from head mesoderm namespace: zebrafish_anatomy xref: TAO:0000998 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000999 @@ -11810,8 +11813,8 @@ name: mesenchyme derived from trunk neural crest namespace: zebrafish_anatomy xref: TAO:0000999 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001000 @@ -11822,9 +11825,9 @@ synonym: "mesenchyme pectoral fins" EXACT PLURAL [] xref: TAO:0001000 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0000789 ! mesoderm pectoral fin bud -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001001 @@ -11833,9 +11836,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 13 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001001 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001002 @@ -11854,9 +11857,9 @@ subset: cell_slim synonym: "muscle pioneers somite 12" EXACT PLURAL [] xref: TAO:0001003 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001004 @@ -11867,9 +11870,9 @@ subset: cell_slim synonym: "muscle pioneers somite 15" EXACT PLURAL [] xref: TAO:0001004 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001005 @@ -11880,9 +11883,9 @@ subset: cell_slim synonym: "muscle pioneers somite 18" EXACT PLURAL [] xref: TAO:0001005 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001006 @@ -11893,9 +11896,9 @@ subset: cell_slim synonym: "muscle pioneers somite 21" EXACT PLURAL [] xref: TAO:0001006 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001007 @@ -11906,9 +11909,9 @@ subset: cell_slim synonym: "muscle pioneers somite 24" EXACT PLURAL [] xref: TAO:0001007 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001008 @@ -11919,9 +11922,9 @@ subset: cell_slim synonym: "muscle pioneers somite 27" EXACT PLURAL [] xref: TAO:0001008 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001009 @@ -11932,9 +11935,9 @@ subset: cell_slim synonym: "muscle pioneers somite 3" EXACT PLURAL [] xref: TAO:0001009 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001010 @@ -11945,9 +11948,9 @@ subset: cell_slim synonym: "muscle pioneers somite 5" EXACT PLURAL [] xref: TAO:0001010 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001011 @@ -11958,9 +11961,9 @@ subset: cell_slim synonym: "muscle pioneers somite 8" EXACT PLURAL [] xref: TAO:0001011 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001012 @@ -11969,9 +11972,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 16 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001012 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001013 @@ -11980,9 +11983,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 10 that gives rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001013 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001014 @@ -11991,9 +11994,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 13 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001014 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001015 @@ -12002,9 +12005,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 17 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001015 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001016 @@ -12013,9 +12016,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 2 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001016 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001017 @@ -12024,9 +12027,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 22 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001017 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001018 @@ -12035,9 +12038,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 25 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001018 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001019 @@ -12046,9 +12049,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 28 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001019 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001020 @@ -12057,9 +12060,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 30 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001020 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001021 @@ -12068,9 +12071,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 6 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001021 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001022 @@ -12079,9 +12082,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 9 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001022 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001023 @@ -12090,9 +12093,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 19 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001023 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001024 @@ -12101,8 +12104,8 @@ namespace: zebrafish_anatomy def: "Neural crest that is part of the trunk." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001024 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001025 @@ -12113,9 +12116,9 @@ synonym: "neuromast occipital" EXACT [] synonym: "neuromasts occipital" EXACT PLURAL [] xref: TAO:0001025 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000400 ! occipital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001026 @@ -12126,9 +12129,9 @@ synonym: "neuromast supraorbital" EXACT [] synonym: "neuromasts supraorbital" EXACT PLURAL [] xref: TAO:0001026 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000443 ! supraorbital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001027 @@ -12139,9 +12142,9 @@ synonym: "buccal cavity" EXACT [] synonym: "buccal chamber" EXACT [] xref: TAO:0001027 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001028 @@ -12153,9 +12156,9 @@ synonym: "parhypurapophysis" EXACT [] synonym: "parhypurapophysis process" EXACT [] xref: TAO:0001028 is_a: ZFA:0000859 ! specialized hemal arch and spine -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000438 ! parhypural -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001029 @@ -12166,9 +12169,9 @@ synonym: "ILM" EXACT [] synonym: "inner limiting membranes" EXACT PLURAL [] xref: TAO:0001029 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001030 @@ -12177,9 +12180,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 21 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001030 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001031 @@ -12190,8 +12193,8 @@ synonym: "r1" EXACT [] xref: TAO:0001031 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001207 ! presumptive rhombomere 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001032 @@ -12202,8 +12205,8 @@ synonym: "r4" EXACT [] xref: TAO:0001032 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001212 ! presumptive rhombomere 4 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001033 @@ -12212,10 +12215,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 1." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001033 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001034 @@ -12224,10 +12227,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001034 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001035 @@ -12236,10 +12239,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001035 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001036 @@ -12248,9 +12251,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 10 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001036 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001037 @@ -12259,9 +12262,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 13 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001037 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001038 @@ -12270,9 +12273,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 16 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001038 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001039 @@ -12281,9 +12284,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 19 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001039 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001040 @@ -12292,9 +12295,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 24 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001040 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001041 @@ -12303,9 +12306,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 21 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001041 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001042 @@ -12314,9 +12317,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 24 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001042 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001043 @@ -12325,9 +12328,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 27 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001043 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001044 @@ -12336,9 +12339,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 3 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001044 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001045 @@ -12347,9 +12350,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 5 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001045 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001046 @@ -12358,9 +12361,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 8 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001046 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001047 @@ -12371,9 +12374,9 @@ subset: cell_slim synonym: "slow muscle cells somite 10" EXACT PLURAL [] xref: TAO:0001047 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001048 @@ -12384,9 +12387,9 @@ subset: cell_slim synonym: "slow muscle cells somite 13" EXACT PLURAL [] xref: TAO:0001048 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001049 @@ -12397,9 +12400,9 @@ subset: cell_slim synonym: "slow muscle cells somite 16" EXACT PLURAL [] xref: TAO:0001049 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001050 @@ -12410,9 +12413,9 @@ subset: cell_slim synonym: "slow muscle cells somite 19" EXACT PLURAL [] xref: TAO:0001050 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001051 @@ -12424,9 +12427,9 @@ synonym: "posterior cerebral carotid artery" EXACT [] synonym: "posterior rami of the cerebral carotid artery" EXACT [] xref: TAO:0001051 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005081 ! internal carotid artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001052 @@ -12437,9 +12440,9 @@ synonym: "medial head vein" EXACT [] synonym: "PHBC" EXACT [] xref: TAO:0001052 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001053 @@ -12449,8 +12452,8 @@ def: "Artery that originates as rostral extensions of the paired lateral dorsal synonym: "PICA" EXACT [] xref: TAO:0001053 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001054 @@ -12460,8 +12463,8 @@ def: "Connect the outflow of the aortic arches to the dorsal aorta. The place wh synonym: "LDA" EXACT [] xref: TAO:0001054 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001055 @@ -12472,10 +12475,10 @@ synonym: "pronephric duct openings" EXACT PLURAL [] synonym: "urogenital opening" RELATED [ZFIN:ZDB-PUB-060508-11] xref: TAO:0001055 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct relationship: part_of ZFA:0000330 ! cloacal chamber -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001056 @@ -12486,9 +12489,9 @@ synonym: "myomeres" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001056 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000155 ! somite -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001057 @@ -12499,8 +12502,8 @@ synonym: "ISV" EXACT [] xref: TAO:0001057 is_a: ZFA:0000082 ! vein is_a: ZFA:0001285 ! intersegmental vessel -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001058 @@ -12512,9 +12515,9 @@ synonym: "tail fin" EXACT [] xref: TAO:0001058 is_a: ZFA:0005597 ! median fin relationship: develops_from ZFA:0001069 ! ventral fin fold -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001059 @@ -12527,9 +12530,9 @@ synonym: "CrDI" EXACT [] synonym: "rostral division of the internal carotid artery" EXACT [] xref: TAO:0001059 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005081 ! internal carotid artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001060 @@ -12539,8 +12542,8 @@ def: "Basidorsals are bilaterally paired cartilages on the dorsolateral side of synonym: "arcualia" RELATED [] xref: TAO:0001060 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000039 ! larval:days 7-13 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001061 @@ -12551,8 +12554,8 @@ synonym: "intersegmental arteries" EXACT PLURAL [] xref: TAO:0001061 is_a: ZFA:0000005 ! artery is_a: ZFA:0001285 ! intersegmental vessel -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001062 @@ -12562,8 +12565,8 @@ def: "Artery that branches dorsally from the cranial division of the internal ca synonym: "PMsA" EXACT [] xref: TAO:0001062 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001063 @@ -12571,9 +12574,9 @@ name: posterior caudal vein namespace: zebrafish_anatomy xref: TAO:0001063 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001064 @@ -12585,9 +12588,9 @@ synonym: "neuromere" RELATED [] synonym: "rhombomeres" EXACT PLURAL [] xref: TAO:0001064 is_a: ZFA:0001328 ! neuromere -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001065 @@ -12595,8 +12598,8 @@ name: lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001065 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001066 @@ -12607,9 +12610,9 @@ synonym: "dorsal arcocentrum" EXACT [] xref: TAO:0001066 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001060 ! basidorsal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001189 ! vertebra -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001067 @@ -12620,9 +12623,9 @@ synonym: "ACeV" EXACT [] synonym: "rostral cerebral vein" EXACT [] xref: TAO:0001067 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001068 @@ -12633,8 +12636,8 @@ synonym: "MsA" EXACT [] xref: TAO:0001068 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001062 ! primitive mesencephalic artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001069 @@ -12646,9 +12649,9 @@ synonym: "tail fin fold" EXACT [] synonym: "ventral fin" EXACT [] xref: TAO:0001069 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001070 @@ -12658,9 +12661,9 @@ def: "Presumptive structure part of the intermediate mesoderm, that is fated to synonym: "nephron primordium" EXACT [] xref: TAO:0001070 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001206 ! intermediate mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001071 @@ -12671,9 +12674,9 @@ synonym: "inner layer optic cup" EXACT [] synonym: "presumptive retinas" EXACT PLURAL [] xref: TAO:0001071 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001072 @@ -12684,9 +12687,9 @@ synonym: "thyroid follicles" EXACT PLURAL [] xref: TAO:0001072 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001081 ! thyroid primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001073 @@ -12695,8 +12698,8 @@ namespace: zebrafish_anatomy def: "Vasculature that runs along the rostral-caudal axis of the fish." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001073 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001074 @@ -12707,9 +12710,9 @@ comment: Taste buds are made up of vertically oriented, elongate cells form the synonym: "taste buds" EXACT PLURAL [] xref: TAO:0001074 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001075 @@ -12719,9 +12722,9 @@ def: "The narrow cleft along the medial wall of the lateral ventricle along the synonym: "choroidal fissures" EXACT PLURAL [] xref: TAO:0001075 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001076 @@ -12734,9 +12737,9 @@ synonym: "foregut" RELATED [] xref: TAO:0001076 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001077 @@ -12748,9 +12751,9 @@ xref: TAO:0001077 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000818 ! vagal neural crest relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001078 @@ -12760,9 +12763,9 @@ def: "Paired organ where maturation of T-lymphocytes occurs. The adult thymus lo xref: TAO:0001078 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001077 ! thymus primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001079 @@ -12773,8 +12776,8 @@ synonym: "blood vessel" RELATED [] xref: TAO:0001079 is_a: ZFA:0001490 ! cavitated compound organ is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001080 @@ -12785,8 +12788,8 @@ synonym: "sclerotomes" EXACT PLURAL [] xref: TAO:0001080 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001081 @@ -12797,9 +12800,9 @@ synonym: "thyroid primordia" EXACT PLURAL [] xref: TAO:0001081 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001082 @@ -12808,9 +12811,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is posterior to the developing notochord during tail bud extension." [ZFIN:ZDB-PUB-970723-15] xref: TAO:0001082 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000077 ! tail bud -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001083 @@ -12820,9 +12823,9 @@ def: "Proliferative region that is part of the ventricular system. The cells di synonym: "ventricular zones" EXACT PLURAL [] xref: TAO:0001083 is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001084 @@ -12831,9 +12834,9 @@ namespace: zebrafish_anatomy synonym: "epaxial myotome regions" EXACT PLURAL [] xref: TAO:0001084 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001085 @@ -12842,9 +12845,9 @@ namespace: zebrafish_anatomy synonym: "hypaxial muscle" EXACT [] xref: TAO:0001085 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001086 @@ -12857,9 +12860,9 @@ synonym: "non migratory adaxial cells" EXACT [] xref: TAO:0001086 is_a: ZFA:0009114 ! muscle cell relationship: develops_from ZFA:0000003 ! adaxial cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001089 @@ -12869,9 +12872,9 @@ synonym: "myocommata" EXACT [ZFIN:ZDB-PUB-151106-17] synonym: "myosepta" EXACT PLURAL [] xref: TAO:0001089 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001093 @@ -12880,8 +12883,8 @@ namespace: zebrafish_anatomy def: "Annotation with this anatomy term indicates that a structure was not specified by the author." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001093 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001094 @@ -12892,8 +12895,8 @@ synonym: "multi-cellular organism" EXACT [] xref: CARO:0000012 xref: TAO:0001094 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001095 @@ -12905,9 +12908,9 @@ synonym: "immature sensory patch" EXACT [] synonym: "immature sensory patches" EXACT PLURAL [] xref: TAO:0001095 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000051 ! otic vesicle -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001096 @@ -12917,9 +12920,9 @@ def: "Is an otic sensory epithelium that will develop into the mature anterior m synonym: "immature anterior maculae" EXACT PLURAL [] xref: TAO:0001096 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001095 ! immature macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001097 @@ -12929,9 +12932,9 @@ def: "Is an otic sensory epithelium that will develop into the mature posterior synonym: "immature posterior maculae" EXACT PLURAL [] xref: TAO:0001097 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001095 ! immature macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001098 @@ -12942,9 +12945,9 @@ subset: cell_slim synonym: "immature sensory hair cells anterior macula" EXACT PLURAL [] xref: TAO:0001098 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001096 ! immature anterior macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001099 @@ -12955,9 +12958,9 @@ subset: cell_slim synonym: "immature sensory hair cells posterior macula" EXACT PLURAL [] xref: TAO:0001099 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001097 ! immature posterior macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001100 @@ -12966,9 +12969,9 @@ namespace: zebrafish_anatomy def: "A duct that carries bile from the liver to the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001100 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001101 @@ -12977,8 +12980,8 @@ namespace: zebrafish_anatomy def: "Sensory system that uses taste buds to sense chemical compounds." [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0001101 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001104 @@ -12987,9 +12990,9 @@ namespace: zebrafish_anatomy xref: TAO:0001104 is_a: ZFA:0000017 ! endoderm disjoint_from: ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001105 @@ -12999,9 +13002,9 @@ def: "Anatomical structure that is part of the embryo and is comprised of portio synonym: "embryonic structures" EXACT PLURAL [] xref: TAO:0001105 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001106 @@ -13012,10 +13015,10 @@ synonym: "pharyngeal pouches" EXACT PLURAL [] xref: TAO:0001106 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001306 ! pharyngeal arch -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001107 @@ -13026,9 +13029,9 @@ synonym: "internal gill buds" EXACT PLURAL [] xref: TAO:0001107 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001108 @@ -13040,8 +13043,8 @@ synonym: "commissura rostral" EXACT [] synonym: "rostral commissure" EXACT [] xref: TAO:0001108 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001109 @@ -13055,9 +13058,9 @@ synonym: "egg" RELATED [] xref: CL:0000023 xref: TAO:0001109 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001110 @@ -13067,9 +13070,9 @@ def: "Oocyte development of zebrafish has been divided into five stages based on synonym: "egg follicle" EXACT [] xref: TAO:0001110 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000403 ! ovary -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001111 @@ -13079,9 +13082,9 @@ def: "Acellular anatomic structure that is a layer that separates the developin synonym: "vitelline envelope" EXACT [] xref: TAO:0001111 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001112 @@ -13091,9 +13094,9 @@ def: "Portion of tissue part of the ovarian follicle containing a single layer o synonym: "granulosa cell layers" EXACT PLURAL [] xref: TAO:0001112 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001113 @@ -13103,9 +13106,9 @@ def: "Multi-tissue structure of the ovarian follicle, composed of stromal cells synonym: "thecal cell layers" EXACT PLURAL [] xref: TAO:0001113 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001114 @@ -13114,8 +13117,8 @@ namespace: zebrafish_anatomy def: "Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001114 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001115 @@ -13125,8 +13128,8 @@ def: "Organism subdivision which is the part of the body posterior to the head a xref: TAO:0001115 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001116 @@ -13136,8 +13139,8 @@ def: "Portion of embryonic tissue determined by fate mapping to become a structu synonym: "presumptive structures" EXACT PLURAL [] xref: TAO:0001116 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0001117 @@ -13148,8 +13151,8 @@ synonym: "tail" RELATED [] xref: TAO:0001117 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001118 @@ -13163,9 +13166,9 @@ synonym: "UGP" EXACT [] synonym: "urogenital papillae" EXACT PLURAL [] xref: TAO:0001118 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001119 @@ -13176,9 +13179,9 @@ xref: TAO:0001119 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000255 ! paraxial mesoderm relationship: develops_from ZFA:0000787 ! mesenchyme derived from head neural crest -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001120 @@ -13188,9 +13191,9 @@ synonym: "neural ectoderm" EXACT [] synonym: "neurectoderm" EXACT [] xref: TAO:0001120 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001121 @@ -13199,8 +13202,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become the shield. Defined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001121 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000018 ! Gastrula:Germ-ring -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000018 ! gastrula:germ-ring +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0001122 @@ -13210,8 +13213,8 @@ def: "Portion of tissue that consists of a layer of cells that form during embry synonym: "embryonic germ layers" EXACT [] xref: TAO:0001122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000038 ! Larval:Day 6 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000038 ! larval:day 6 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001123 @@ -13222,8 +13225,8 @@ synonym: "median fin skeleton" EXACT [] synonym: "unpaired fin skeleton" EXACT [] xref: TAO:0001123 is_a: ZFA:0000317 ! postcranial axial skeleton -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001124 @@ -13232,9 +13235,9 @@ namespace: zebrafish_anatomy def: "Median fin skeleton located on the dorsal surface of the organism." [TAO:curator] xref: TAO:0001124 is_a: ZFA:0001123 ! axial fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001125 @@ -13244,9 +13247,9 @@ def: "The dorsal marginal region of the YSL where maternal dorsal determinants l synonym: "Nieuwkoop center" EXACT [] xref: TAO:0001125 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000012 ! Blastula:High +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001126 @@ -13257,9 +13260,9 @@ synonym: "NEM" EXACT [] synonym: "noninvoluting endocytic marginal cells" EXACT PLURAL [] xref: TAO:0001126 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000017 ! gastrula:50%-epiboly relationship: part_of ZFA:0000038 ! margin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001127 @@ -13268,8 +13271,8 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for the perception of light." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001127 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001128 @@ -13278,8 +13281,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 1" EXACT PLURAL [] xref: TAO:0001128 is_a: ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001129 @@ -13287,8 +13290,8 @@ name: pharyngeal pouches 2-6 namespace: zebrafish_anatomy xref: TAO:0001129 is_a: ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001130 @@ -13297,8 +13300,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 2" EXACT PLURAL [] xref: TAO:0001130 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001131 @@ -13307,8 +13310,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 3" EXACT PLURAL [] xref: TAO:0001131 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001132 @@ -13317,8 +13320,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 6" EXACT PLURAL [] xref: TAO:0001132 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001133 @@ -13327,8 +13330,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 5" EXACT PLURAL [] xref: TAO:0001133 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001134 @@ -13337,8 +13340,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 4" EXACT PLURAL [] xref: TAO:0001134 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001135 @@ -13349,8 +13352,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0001135 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000133 ! neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001136 @@ -13360,9 +13363,9 @@ def: "A layer separating the inner face of the dermis from the subjacent muscle synonym: "subcutis" EXACT [] xref: TAO:0001136 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001137 @@ -13372,8 +13375,8 @@ def: "Tooth row that is the ventralmost row of teeth on ceratobranchial 5 bone." synonym: "ventral tooth rows" EXACT PLURAL [] xref: TAO:0001137 is_a: ZFA:0001642 ! tooth row -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001138 @@ -13382,8 +13385,8 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for the perception of spatial orientation and auditory stimuli." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001138 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001139 @@ -13393,8 +13396,8 @@ def: "Tooth row that is the mediodorsal row of teeth on ceratobranchial 5 bone, synonym: "mediodorsal tooth rows" EXACT PLURAL [] xref: TAO:0001139 is_a: ZFA:0001642 ! tooth row -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001140 @@ -13404,8 +13407,8 @@ def: "Tooth row that is the dorsalmost row of teeth on ceratobranchial 5 bone." synonym: "dorsal tooth rows" EXACT PLURAL [] xref: TAO:0001140 is_a: ZFA:0001642 ! tooth row -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001141 @@ -13414,9 +13417,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001141 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001142 @@ -13425,9 +13428,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001142 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001143 @@ -13436,9 +13439,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 3V and anterior to tooth 5V in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001143 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001144 @@ -13447,9 +13450,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1V and anterior to tooth 3V in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001144 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001145 @@ -13458,9 +13461,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001145 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001146 @@ -13469,9 +13472,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001146 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001147 @@ -13480,9 +13483,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1MD and anterior to tooth 3MD in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001147 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001148 @@ -13491,9 +13494,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the dorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001148 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001140 ! dorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001149 @@ -13502,8 +13505,8 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for olfaction. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001149 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001150 @@ -13512,9 +13515,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the dorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001150 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001140 ! dorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001151 @@ -13523,9 +13526,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001151 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001152 @@ -13534,9 +13537,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2MD and anterior to tooth 4MD in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001152 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001153 @@ -13547,9 +13550,9 @@ synonym: "dental primordium" EXACT [] synonym: "tooth germ" EXACT [] xref: TAO:0001153 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001174 ! pharyngeal epithelium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001154 @@ -13558,9 +13561,9 @@ namespace: zebrafish_anatomy def: "Musculature part of the anal fin." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001154 is_a: ZFA:0000207 ! fin musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001162 ! anal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001155 @@ -13570,9 +13573,9 @@ def: "Nervous system that is involved primarily with the internal regulation of xref: TAO:0001155 is_a: ZFA:0001574 ! autonomic nervous system relationship: develops_from ZFA:0001334 ! presumptive enteric nervous system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001156 @@ -13582,9 +13585,9 @@ def: "Dorsolateral placode that gives rise to the posterior lateral line." [GOC: synonym: "posterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001156 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001157 @@ -13595,9 +13598,9 @@ synonym: "posterior lateral line primordia" EXACT PLURAL [] xref: TAO:0001157 is_a: ZFA:0000228 ! lateral line primordium relationship: develops_from ZFA:0001156 ! posterior lateral line placode -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001158 @@ -13606,8 +13609,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that produces, transports and secretes peptides." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001158 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001159 @@ -13616,8 +13619,8 @@ namespace: zebrafish_anatomy def: "System that provides protection against foreign and abnormal cells and removes cellular debris." [ISBN:0314472304] xref: TAO:0001159 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001160 @@ -13636,8 +13639,8 @@ synonym: "pectoral fins" EXACT PLURAL [] xref: TAO:0001161 is_a: ZFA:0005596 ! paired fin relationship: develops_from ZFA:0000141 ! pectoral fin bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001162 @@ -13647,9 +13650,9 @@ def: "Median fin that is located posterior to the anus." [TAO:curator] xref: TAO:0001162 is_a: ZFA:0005597 ! median fin relationship: develops_from ZFA:0001069 ! ventral fin fold -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001163 @@ -13658,8 +13661,8 @@ namespace: zebrafish_anatomy def: "Supraneural located between vertebra 6 and 7." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001163 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001164 @@ -13669,8 +13672,8 @@ def: "Supraneural located between vertebra 5 and 6." [ZFIN:ZDB-PUB-031103-13] synonym: "sn6" EXACT [] xref: TAO:0001164 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001165 @@ -13680,8 +13683,8 @@ def: "Supraneural located between vertebra 4 and 5." [ZDB:ZDB-PUB-031103-13] synonym: "sn5" EXACT [] xref: TAO:0001165 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001166 @@ -13690,8 +13693,8 @@ namespace: zebrafish_anatomy def: "Supraneural located between vertebra 8 and 9." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001166 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001167 @@ -13701,8 +13704,8 @@ def: "Vertebra that is posteriorly adjacent to the neurocranium." [TAO:curator] synonym: "cervical vertebra 1" EXACT [] xref: TAO:0001167 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001168 @@ -13712,8 +13715,8 @@ def: "Vertebra that is posteriorly adjacent to vertebra 1." [TAO:curator] synonym: "cervical vertebra 2" EXACT [] xref: TAO:0001168 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001169 @@ -13722,8 +13725,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 2." [TAO:curator] xref: TAO:0001169 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001170 @@ -13732,8 +13735,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 3." [TAO:curator] xref: TAO:0001170 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001171 @@ -13744,10 +13747,10 @@ comment: The os suspensorium is similar in shape to a rib, but the other ribs in xref: TAO:0001171 is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001170 ! vertebra 4 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001172 @@ -13756,10 +13759,10 @@ namespace: zebrafish_anatomy def: "Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus. Located dorsal to the neural tube." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001172 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001191 ! supraneural 2 relationship: part_of ZFA:0001192 ! supraneural 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001173 @@ -13769,8 +13772,8 @@ def: "Median fin that is located on the dorsal surface of the fish." [GOC:cvs, O xref: TAO:0001173 is_a: ZFA:0005597 ! median fin relationship: develops_from ZFA:0000102 ! dorsal fin fold -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001174 @@ -13780,9 +13783,9 @@ def: "Epithelium lining the pharynx consisting largely of simple columnar epithe xref: TAO:0001174 is_a: ZFA:0001495 ! unilaminar epithelium relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001175 @@ -13791,8 +13794,8 @@ namespace: zebrafish_anatomy def: "Embryonic structure that is the dome of cytoplasm that segregates from the yolk toward the animal pole during and after the one cell-stage, and which undergoes cleavage." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001175 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001176 @@ -13802,8 +13805,8 @@ def: "Embryonic structure that is composed of the cellular part of the embryo, e xref: TAO:0001176 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001175 ! blastodisc -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0001177 @@ -13811,10 +13814,10 @@ name: roof plate spinal cord region namespace: zebrafish_anatomy xref: TAO:0001177 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001178 @@ -13823,9 +13826,9 @@ namespace: zebrafish_anatomy synonym: "ventral ectoderm" EXACT [] xref: TAO:0001178 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001179 @@ -13835,9 +13838,9 @@ def: "The outer layer of the epidermis. The living cells form single cell layer xref: TAO:0001179 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001185 ! periderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001180 @@ -13847,9 +13850,9 @@ def: "Lower layer of the epidermis. Composed of a single layer of cells. The ma synonym: "basal epidermal layer" EXACT [] xref: TAO:0001180 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001181 @@ -13858,9 +13861,9 @@ namespace: zebrafish_anatomy def: "The tissue which lies between the basal stratum and the superficial stratum. This layer is composed of a variable number of cell layers which contain mucous goblet cells, club cells and sensory cells. Most of the cells of this region are undifferentiated. They serve as a reservoir to replace dead cells in any of the epidermis regions." [ZFIN:ZDB-PUB-040726-12] xref: TAO:0001181 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001182 @@ -13871,9 +13874,9 @@ synonym: "stratum compactum" EXACT [] xref: TAO:0001182 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001186 ! collagenous dermal stroma -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001183 @@ -13883,9 +13886,9 @@ def: "Outer portion of the dermis composed of a loose collagenous matrix housing synonym: "stratum laxum" EXACT [] xref: TAO:0001183 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001184 @@ -13896,8 +13899,8 @@ synonym: "pelvic fins" EXACT PLURAL [] xref: TAO:0001184 is_a: ZFA:0005596 ! paired fin relationship: develops_from ZFA:0001384 ! pelvic fin bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001185 @@ -13908,9 +13911,9 @@ synonym: "EVL" RELATED [] xref: TAO:0001185 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000086 ! EVL -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001186 @@ -13920,9 +13923,9 @@ def: "Acellular anatomical structure that is a layer of collagen fibrils in the synonym: "primary dermal stroma" EXACT [] xref: TAO:0001186 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001187 @@ -13932,9 +13935,9 @@ def: "Embryonic structure that gives rise to the midbrain hindbrain boundary." [ synonym: "presumptive midbrain-hindbrain boundary" EXACT [] xref: TAO:0001187 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001188 @@ -13943,9 +13946,9 @@ namespace: zebrafish_anatomy def: "The Weberian apparatus consists of the modified anteriormost four vertebrae and associated structures of otophysans which transduce sound or pressure waves from the tunica externa of the swim bladder to the inner ear (Alexander, 1962)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001188 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001189 @@ -13955,9 +13958,9 @@ def: "All serially repeated ossified, cartilaginous, and ligamentous elements ar synonym: "vertebrae" EXACT PLURAL [] xref: TAO:0001189 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001190 @@ -13967,9 +13970,9 @@ def: "The first four vertebrae, which are part of the Weberian apparatus." [GOC: synonym: "Weberian vertebrae" EXACT PLURAL [] xref: TAO:0001190 is_a: ZFA:0000263 ! precaudal vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001191 @@ -13980,9 +13983,9 @@ synonym: "small supraneural" EXACT [] synonym: "sn2" EXACT [] xref: TAO:0001191 is_a: ZFA:0000442 ! supraneural -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001363 ! neural complex -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001192 @@ -13993,9 +13996,9 @@ synonym: "large supraneural" EXACT [] synonym: "sn3" EXACT [] xref: TAO:0001192 is_a: ZFA:0000442 ! supraneural -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001363 ! neural complex -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001193 @@ -14004,8 +14007,8 @@ namespace: zebrafish_anatomy def: "Supraneural located between vertebra 7 and 8." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001193 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001194 @@ -14014,8 +14017,8 @@ namespace: zebrafish_anatomy def: "Neural crest that is part of the head." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001194 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001195 @@ -14025,9 +14028,9 @@ def: "The anterior portion of the adenohypophysis. Comprised of the proximal and synonym: "pars distalis" EXACT [] xref: TAO:0001195 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001282 ! adenohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001196 @@ -14044,9 +14047,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of the adenohypophysis." [ZFIN:ZDB-PUB-080616-4] xref: TAO:0001197 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001282 ! adenohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001198 @@ -14057,8 +14060,8 @@ synonym: "pituitary placode" EXACT [] xref: TAO:0001198 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001178 ! non neural ectoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001199 @@ -14070,9 +14073,9 @@ synonym: "infundibulum of hypothalamus" EXACT [] synonym: "pituitary stalk" EXACT [] xref: TAO:0001199 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001271 ! neurohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001200 @@ -14081,8 +14084,8 @@ namespace: zebrafish_anatomy def: "Islands of eosinic cells found on the lateroventral surface of the kidney. Function is thought to be that of the parathyroid gland in other vertebrates, which are lacking in fishes. These cells secrete hypocalcin (teleocalcin) to regulate calcium metabolism." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001200 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001201 @@ -14090,9 +14093,9 @@ name: ventral lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001201 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000083 ! ventral mesoderm -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0001202 @@ -14103,9 +14106,9 @@ synonym: "eye cup" EXACT [] xref: TAO:0001202 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000050 ! optic vesicle -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001203 @@ -14118,9 +14121,9 @@ synonym: "ciliary body" RELATED [] synonym: "ciliary epithelial zone" EXACT [] xref: TAO:0001203 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001204 @@ -14130,8 +14133,8 @@ def: "Region of the mesoderm that is located along the rostral-caudal axis of th xref: TAO:0001204 is_a: ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0001378 ! axial hypoblast -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001205 @@ -14141,10 +14144,10 @@ def: "Meckel's cartilage is the bilaterally paired, rod-like, cartilaginous vent synonym: "ventral mandibular cartilage" EXACT [] xref: TAO:0001205 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0007117 ! Meckel's cartilage-palatoquadrate cartilage joint relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001206 @@ -14153,8 +14156,8 @@ namespace: zebrafish_anatomy synonym: "IM" EXACT [] xref: TAO:0001206 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001207 @@ -14163,9 +14166,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001207 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001208 @@ -14174,9 +14177,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 2." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001208 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001209 @@ -14185,9 +14188,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 7." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001209 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001210 @@ -14196,9 +14199,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 6." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001210 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001211 @@ -14207,9 +14210,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 5." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001211 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001212 @@ -14218,9 +14221,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 4." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001212 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001213 @@ -14229,9 +14232,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001213 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001214 @@ -14240,9 +14243,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 8." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001214 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001215 @@ -14252,9 +14255,9 @@ def: "Multi-tissue structure that is paired, and is situated one on either side synonym: "thalami" EXACT PLURAL [] xref: TAO:0001215 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001216 @@ -14266,9 +14269,9 @@ synonym: "pharyngeal skeleton" EXACT [] xref: TAO:0001216 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0005771 ! ectomesenchyme -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001217 @@ -14277,8 +14280,8 @@ namespace: zebrafish_anatomy def: "Tissue along the lateral edges of the shield that is fated to develop into the hypochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001217 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001218 @@ -14287,9 +14290,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, the part of the neural plate fated to become floor plate." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001218 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001220 @@ -14299,9 +14302,9 @@ def: "Pharyngeal arch cartilage that is ventral, median, and associated with mor synonym: "copulae" EXACT PLURAL [] xref: TAO:0001220 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001221 @@ -14311,8 +14314,8 @@ def: "Copula that is ventral, median, and associated with pharyngeal arches 3-5. synonym: "anterior copula" EXACT [] xref: TAO:0001221 is_a: ZFA:0001220 ! copula -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001222 @@ -14322,8 +14325,8 @@ def: "Copula that is ventral, median, and associated with pharyngeal arches 6-7. synonym: "posterior copula" EXACT [] xref: TAO:0001222 is_a: ZFA:0001220 ! copula -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001223 @@ -14333,8 +14336,8 @@ def: "Basibranchial 1 ossifies posterior to the basihyal and anterior to the fir xref: TAO:0001223 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001224 @@ -14344,8 +14347,8 @@ def: "Basibranchial 2 ossifies in copula 1 posterior to the first hypobranchials xref: TAO:0001224 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001225 @@ -14355,8 +14358,8 @@ def: "Basibranchial 3 ossifies in copula 1 posterior to the second hypobranchial xref: TAO:0001225 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001226 @@ -14366,8 +14369,8 @@ def: "Occasionally, a fourth basibranchial ossifies in the narrow copula 2 carti xref: TAO:0001226 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001222 ! copula 2 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001227 @@ -14381,10 +14384,10 @@ synonym: "oral jaw skeleton" EXACT [] synonym: "pharyngeal arch 1 skeleton" EXACT [] xref: TAO:0001227 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: part_of ZFA:0001612 ! pharyngeal arch 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001228 @@ -14396,10 +14399,10 @@ synonym: "gill arch 1 skeleton" EXACT [] synonym: "visceral arch 3 skeleton" EXACT [] xref: TAO:0001228 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001606 ! pharyngeal arch 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001229 @@ -14411,10 +14414,10 @@ synonym: "gill arch 5 skeleton" EXACT [] synonym: "visceral arch 7 skeleton" EXACT [] xref: TAO:0001229 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001610 ! pharyngeal arch 7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001230 @@ -14426,10 +14429,10 @@ synonym: "gill arch 4 skeleton" EXACT [] synonym: "visceral arch 6 skeleton" EXACT [] xref: TAO:0001230 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001609 ! pharyngeal arch 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001231 @@ -14441,10 +14444,10 @@ synonym: "gill arch 2 skeleton" EXACT [] synonym: "visceral arch 4 skeleton" EXACT [] xref: TAO:0001231 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001607 ! pharyngeal arch 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001232 @@ -14456,10 +14459,10 @@ synonym: "gill arch 3 skeleton" EXACT [] synonym: "visceral arch 5 skeleton" EXACT [] xref: TAO:0001232 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001608 ! pharyngeal arch 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001233 @@ -14470,9 +14473,9 @@ synonym: "hypobranchial 1 bones" EXACT PLURAL [] xref: TAO:0001233 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001524 ! hypobranchial 1 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001234 @@ -14484,9 +14487,9 @@ synonym: "hypobranchial 4 bones" EXACT PLURAL [] xref: TAO:0001234 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001523 ! hypobranchial 4 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001235 @@ -14497,9 +14500,9 @@ synonym: "hypobranchial 3 bones" EXACT PLURAL [] xref: TAO:0001235 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001526 ! hypobranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001236 @@ -14510,9 +14513,9 @@ synonym: "hypobranchial 2 bones" EXACT PLURAL [] xref: TAO:0001236 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001525 ! hypobranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001237 @@ -14522,9 +14525,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001237 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001520 ! ceratobranchial 1 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001238 @@ -14534,9 +14537,9 @@ def: "Multi-tissue structure that consists of pigmented stroma and is connected synonym: "irises" EXACT PLURAL [] xref: TAO:0001238 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001239 @@ -14546,9 +14549,9 @@ def: "Ceratobranchial bone that is the most posterior, bilaterally paired ventra xref: TAO:0001239 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001521 ! ceratobranchial 5 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001240 @@ -14558,9 +14561,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001240 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001519 ! ceratobranchial 4 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001241 @@ -14570,9 +14573,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001241 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001518 ! ceratobranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001242 @@ -14582,9 +14585,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001242 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001517 ! ceratobranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001243 @@ -14594,9 +14597,9 @@ def: "Epibranchial bone that is bilaterally paired and articulates laterally wit xref: TAO:0001243 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001528 ! epibranchial 1 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001244 @@ -14606,9 +14609,9 @@ def: "Epibranchial cartilage that is bilaterally paired and appears as a separat synonym: "interbranchial IV" EXACT [] xref: TAO:0001244 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001245 @@ -14618,9 +14621,9 @@ def: "Epibranchial bone that is bilaterally paired and articulates laterally wit xref: TAO:0001245 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001531 ! epibranchial 4 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001246 @@ -14630,9 +14633,9 @@ def: "Epibranchial bone that is bilaterally paired and articulates laterally wit xref: TAO:0001246 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001530 ! epibranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001247 @@ -14643,9 +14646,9 @@ synonym: "infrapharyngobranchial 3" EXACT [] xref: TAO:0001247 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001529 ! epibranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001248 @@ -14664,9 +14667,9 @@ synonym: "rostral pancreas" RELATED [ZFIN:ZDB-PUB-050623-3.] xref: TAO:0001249 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001369 ! anterior pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000140 ! pancreas -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001250 @@ -14677,9 +14680,9 @@ synonym: "infrapharyngobranchial 2" EXACT [] xref: TAO:0001250 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001536 ! pharyngobranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001251 @@ -14690,9 +14693,9 @@ synonym: "infrapharyngobranchial 4 cartilage" EXACT [] synonym: "infrapharyngobranchials" EXACT [] xref: TAO:0001251 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001252 @@ -14703,9 +14706,9 @@ synonym: "pharyngobranchial 3 bones" EXACT PLURAL [] xref: TAO:0001252 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001534 ! pharyngobranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001253 @@ -14728,9 +14731,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the lateral part of the floor plate." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001256 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001257 @@ -14739,9 +14742,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the medial part of the floor plate and is located adjacent to the notochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001257 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001258 @@ -14751,10 +14754,10 @@ def: "Floor plate that is part of the rhombomeres." [GOC:mh, ORCiD:0000-0001-911 synonym: "floor plate hindbrain region" RELATED [] xref: TAO:0001258 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001259 @@ -14764,10 +14767,10 @@ synonym: "forebrain vesicle" EXACT [] synonym: "prosencephalic ventricle" EXACT [] xref: TAO:0001259 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000109 ! forebrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001260 @@ -14780,9 +14783,9 @@ synonym: "tail pancreas" RELATED [ZFIN:ZDB-PUB-080922-7] xref: TAO:0001260 is_a: ZFA:0001489 ! compound organ component relationship: develops_from ZFA:0001370 ! posterior pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000140 ! pancreas -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001261 @@ -14790,9 +14793,9 @@ name: ventricular system namespace: zebrafish_anatomy xref: TAO:0001261 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001262 @@ -14803,9 +14806,9 @@ synonym: "gonadal primordium" EXACT [] synonym: "undifferentiated gonad" EXACT [] xref: TAO:0001262 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001263 @@ -14816,8 +14819,8 @@ synonym: "ovarian follicle stage 1" EXACT [] synonym: "previtellogenic ovarian follicle" EXACT [] xref: TAO:0001263 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001264 @@ -14828,8 +14831,8 @@ synonym: "mature ovarian follicle" EXACT [] synonym: "ovarian follicle stage 4" EXACT [] xref: TAO:0001264 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001265 @@ -14840,8 +14843,8 @@ synonym: "ovarian follicle stage 2" EXACT [] synonym: "ovarian follicles stage II" EXACT PLURAL [] xref: TAO:0001265 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001266 @@ -14852,8 +14855,8 @@ synonym: "ovarian follicle stage 3" EXACT [] synonym: "ovarian follicles stage III" EXACT PLURAL [] xref: TAO:0001266 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001267 @@ -14863,9 +14866,9 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th synonym: "head vasculature" EXACT [] xref: TAO:0001267 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001268 @@ -14877,9 +14880,9 @@ synonym: "efferent tubule" EXACT [] synonym: "sperm ducts" EXACT PLURAL [] xref: TAO:0001268 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001269 @@ -14889,8 +14892,8 @@ def: "Fin undergoing the process of regeneration." [GOC:cvs, ORCiD:0000-0002-224 synonym: "regenerating fins" EXACT PLURAL [] xref: TAO:0001269 is_a: ZFA:0000108 ! fin -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001270 @@ -14900,9 +14903,9 @@ def: "A regenerating tissue composed of a proliferative mass of undifferentiated synonym: "regeneration blastema" EXACT [ZFIN:ZDB-PUB-061108-12] xref: TAO:0001270 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001269 ! regenerating fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001271 @@ -14911,9 +14914,9 @@ namespace: zebrafish_anatomy synonym: "posterior pituitary" EXACT [] xref: TAO:0001271 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001272 @@ -14926,11 +14929,11 @@ synonym: "upper jaw" EXACT [] synonym: "upper pharyngeal jaw" EXACT [] xref: TAO:0001272 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000444 ! suspensorium relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001273 @@ -14942,10 +14945,10 @@ synonym: "mandible" EXACT [] synonym: "mandibular series" EXACT [] xref: TAO:0001273 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001274 @@ -14956,10 +14959,10 @@ synonym: "coronoid" RELATED [] synonym: "sesamoid articular" EXACT [] xref: TAO:0001274 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001275 @@ -14975,10 +14978,10 @@ namespace: zebrafish_anatomy synonym: "hyoid bars" EXACT [] xref: TAO:0001276 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: part_of ZFA:0001611 ! pharyngeal arch 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001277 @@ -14989,9 +14992,9 @@ synonym: "camera arerea weberiana" EXACT [] xref: TAO:0001277 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005337 ! anterior swim bladder bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001278 @@ -15000,9 +15003,9 @@ namespace: zebrafish_anatomy def: "The posterior compartment of the swim bladder plays a key role in buoyancy control. It is connected to the anterior chamber via the ductus communicans. This chamber corresponds to the swim bladder found in larval fish." [ZFIN:ZDB-PUB-060306-11] xref: TAO:0001278 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001279 @@ -15012,8 +15015,8 @@ def: "Branchiostegal ray that is the most anterior ray which ossifies last (5.5 synonym: "branchiostegal rays 1" EXACT PLURAL [] xref: TAO:0001279 is_a: ZFA:0000476 ! branchiostegal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001280 @@ -15023,8 +15026,8 @@ def: "Branchiostegal ray that is the most posterior ray which ossifies first (3. synonym: "branchiostegal rays 3" EXACT PLURAL [] xref: TAO:0001280 is_a: ZFA:0000476 ! branchiostegal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001281 @@ -15034,8 +15037,8 @@ def: "Branchiostegal ray 2 is between rays 1 and 3 and ossifies second." [GOC:cv synonym: "branchiostegal rays 2" EXACT PLURAL [] xref: TAO:0001281 is_a: ZFA:0000476 ! branchiostegal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001282 @@ -15048,9 +15051,9 @@ synonym: "anterior pituitary" EXACT [] xref: TAO:0001282 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001198 ! adenohypophyseal placode -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001283 @@ -15060,9 +15063,9 @@ def: "Anatomical space that is located in the center of the iris and allows ligh synonym: "pupils" EXACT PLURAL [] xref: TAO:0001283 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001284 @@ -15073,9 +15076,9 @@ synonym: "choroid fissure" RELATED [] synonym: "optic fissures" EXACT PLURAL [] xref: TAO:0001284 is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001285 @@ -15088,10 +15091,10 @@ synonym: "segmental vessel" EXACT [] xref: TAO:0001285 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0000014 ! dorsal aorta -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001286 @@ -15100,8 +15103,8 @@ namespace: zebrafish_anatomy def: "Post-vent vasculature which forms an interconnecting network of venous tubes. The caudal vein plexus forms via a very active period of angiogenic sprouting, beginning at 25 hpf when venous endothelial cells of the posterior cardinal vein sprout and migrate ventrally, then fuse with neighboring tip cells. This process reiterates during a five-hour window, forming a primordial plexus by 30 hpf. By two days of development, the primitive caudal vein plexus has matured into a complex, well-perfused, venous vascular network. Starting at 4 dpf the caudal vein plexus starts to remodel and simplify." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010205-5, ZFIN:ZDB-PUB-111011-36] xref: TAO:0001286 is_a: ZFA:0005932 ! developmental vascular plexus -relationship: end ZFS:0000039 ! Larval:Days 7-13 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000039 ! larval:days 7-13 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001287 @@ -15112,9 +15115,9 @@ synonym: "mesonephric tubule" EXACT [] synonym: "renal tubules" EXACT PLURAL [] xref: TAO:0001287 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005282 ! nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001288 @@ -15125,9 +15128,9 @@ synonym: "glomerular capillary tuft" RELATED [] synonym: "renal glomeruli" EXACT PLURAL [] xref: TAO:0001288 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001289 @@ -15141,9 +15144,9 @@ synonym: "retinal ciliary marginal zone" EXACT [] synonym: "retinal proliferative zone" RELATED [] xref: TAO:0001289 is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001290 @@ -15153,10 +15156,10 @@ def: "Anterior part of the embryonic alimentary canal formed as an invagination synonym: "oral ectoderm" RELATED [ZFIN:ZDB-PUB-100726-23] xref: TAO:0001290 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000112 ! gut relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001291 @@ -15169,8 +15172,8 @@ xref: TAO:0001291 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0000762 ! facio-acoustic neural crest relationship: develops_from ZFA:0001295 ! facial placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001292 @@ -15180,9 +15183,9 @@ def: "The stalk emanates from the diencephalic roof at a left-of-medial position synonym: "pineal stalk" EXACT [] xref: TAO:0001292 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001293 @@ -15192,9 +15195,9 @@ synonym: "posterior kidneys" EXACT PLURAL [] xref: TAO:0001293 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0000151 ! pronephros -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001294 @@ -15205,9 +15208,9 @@ synonym: "epibranchial placodes" EXACT PLURAL [] xref: TAO:0001294 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007061 ! epibranchial field -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001295 @@ -15217,8 +15220,8 @@ def: "Epibranchial placode that gives rise to the facial ganglia." [GOC:mh, ORCi synonym: "geniculate placode" EXACT [] xref: TAO:0001295 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001296 @@ -15228,8 +15231,8 @@ def: "Epibranchial placode that gives rise to the glossopharyngeal ganglia. Asso synonym: "petrosal placode" EXACT [] xref: TAO:0001296 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001297 @@ -15238,8 +15241,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 1." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-31] xref: TAO:0001297 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001298 @@ -15248,8 +15251,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 2." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-31] xref: TAO:0001298 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001299 @@ -15258,8 +15261,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 3." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-3] xref: TAO:0001299 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001300 @@ -15268,8 +15271,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 4." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-31] xref: TAO:0001300 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001301 @@ -15281,8 +15284,8 @@ xref: TAO:0001301 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0001296 ! glossopharyngeal placode relationship: develops_from ZFA:0007066 ! glossopharyngeal neural crest -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001302 @@ -15293,8 +15296,8 @@ synonym: "nodose ganglion 1" EXACT [] xref: TAO:0001302 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001297 ! vagal placode 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001303 @@ -15305,8 +15308,8 @@ synonym: "nodose ganglion 2" EXACT [] xref: TAO:0001303 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001298 ! vagal placode 2 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001304 @@ -15317,8 +15320,8 @@ synonym: "nodose ganglion 3" EXACT [] xref: TAO:0001304 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001299 ! vagal placode 3 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001305 @@ -15329,8 +15332,8 @@ synonym: "nodose ganglion 4" EXACT [] xref: TAO:0001305 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001300 ! vagal placode 4 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001306 @@ -15340,9 +15343,9 @@ def: "One of a series of paired bony or cartilaginous arches that develop along synonym: "pharyngeal arches" EXACT PLURAL [] xref: TAO:0001306 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001307 @@ -15351,9 +15354,9 @@ namespace: zebrafish_anatomy def: "Muscle system of the pharyngeal region." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001307 is_a: ZFA:0000328 ! cephalic musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001306 ! pharyngeal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001308 @@ -15364,9 +15367,9 @@ synonym: "body part" EXACT [] xref: CARO:0000032 xref: TAO:0001308 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0001309 @@ -15377,9 +15380,9 @@ synonym: "neurogenic placodes" EXACT PLURAL [] xref: TAO:0001309 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001310 @@ -15390,8 +15393,8 @@ synonym: "dorsolateral placodes" EXACT PLURAL [] xref: TAO:0001310 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007060 ! dorsolateral field -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001311 @@ -15400,10 +15403,10 @@ namespace: zebrafish_anatomy synonym: "roof plate hindbrain" RELATED [] xref: TAO:0001311 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001064 ! rhombomere relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001312 @@ -15413,8 +15416,8 @@ synonym: "anterodorsal lateral line ganglion" EXACT [] xref: TAO:0001312 is_a: ZFA:0001391 ! anterior lateral line ganglion relationship: develops_from ZFA:0001316 ! anterior lateral line placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001313 @@ -15424,8 +15427,8 @@ synonym: "anteroventral lateral line ganglion" EXACT [] xref: TAO:0001313 is_a: ZFA:0001391 ! anterior lateral line ganglion relationship: develops_from ZFA:0001316 ! anterior lateral line placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001314 @@ -15437,8 +15440,8 @@ synonym: "posterior lateral line ganglia" EXACT PLURAL [] xref: TAO:0001314 is_a: ZFA:0000120 ! lateral line ganglion relationship: develops_from ZFA:0001156 ! posterior lateral line placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001315 @@ -15450,9 +15453,9 @@ synonym: "AVC" EXACT [] xref: TAO:0001315 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001723 ! presumptive atrioventricular canal -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001316 @@ -15462,9 +15465,9 @@ def: "Dorsolateral placode that gives rise to the anterior lateral line." [GOC:y synonym: "anterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001316 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001317 @@ -15475,9 +15478,9 @@ comment: ZDB-PUB-080309-14 says these don't exist but looked at 55 hpf rather th synonym: "endocardial cushions" EXACT PLURAL [] xref: TAO:0001317 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001320 ! endocardium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001318 @@ -15486,9 +15489,9 @@ namespace: zebrafish_anatomy def: "The extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001318 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001319 @@ -15498,9 +15501,9 @@ synonym: "cardiac muscle" RELATED [] synonym: "heart muscle " RELATED [] xref: TAO:0001319 is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001320 @@ -15510,9 +15513,9 @@ def: "Layer that lines the lumen of the heart." [GOC:cvs, ORCiD:0000-0002-2244-7 xref: TAO:0001320 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001724 ! presumptive endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001321 @@ -15523,10 +15526,10 @@ synonym: "trabecula" EXACT [] synonym: "trabecular cartilage" EXACT [] xref: TAO:0001321 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001322 @@ -15536,8 +15539,8 @@ def: "A tract originating in the epiphysis and fasciculating with the tract of t synonym: "DVDT" EXACT [] xref: TAO:0001322 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001323 @@ -15547,9 +15550,9 @@ def: "The terminal region of the mid intestine is comprised of specialized enter xref: TAO:0001323 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001324 @@ -15557,12 +15560,12 @@ name: enteric musculature namespace: zebrafish_anatomy def: "Musculature of the gut." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] synonym: "gut musculature" EXACT [] -synonym: "tunica muscularis" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] +synonym: "tunica muscularis" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0001324 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001325 @@ -15573,9 +15576,9 @@ synonym: "neural prezygapophyses" EXACT PLURAL [] synonym: "neural prezygopophyses" EXACT [] xref: TAO:0001325 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001326 @@ -15584,9 +15587,9 @@ namespace: zebrafish_anatomy def: "Epithelium which borders the anterior and equitorial region of the lens. Lens growth in zebrafish occurs via the differentiation of additional fibre cells from lens epithelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070504-24, ZFIN:ZDB-PUB-100202-20] xref: TAO:0001326 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001327 @@ -15595,8 +15598,8 @@ namespace: zebrafish_anatomy def: "Trunk musculature that is located in ventral wall of abdomen." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001327 is_a: ZFA:0000473 ! trunk musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001328 @@ -15607,9 +15610,9 @@ synonym: "neural segment" EXACT [] synonym: "neuromeres" EXACT PLURAL [] xref: TAO:0001328 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001329 @@ -15619,9 +15622,9 @@ def: "The layer within the retina where the bipolar cells synapse with the dendr synonym: "inner plexiform layer" EXACT [] xref: TAO:0001329 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001330 @@ -15631,9 +15634,9 @@ def: "The layer within the retina where the bipolar cells synapse with the photo synonym: "retinal outer plexiform layers" EXACT PLURAL [] xref: TAO:0001330 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001331 @@ -15644,9 +15647,9 @@ synonym: "external limiting membrane" EXACT [] synonym: "outer limiting membranes" EXACT PLURAL [] xref: TAO:0001331 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001332 @@ -15657,9 +15660,9 @@ synonym: "spinal neuromeres" EXACT PLURAL [] xref: TAO:0001332 is_a: ZFA:0001328 ! neuromere is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001333 @@ -15675,8 +15678,8 @@ def: "Presumptive structure fated to become enteric nervous system. Develops fr xref: TAO:0001334 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0000818 ! vagal neural crest -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001335 @@ -15686,9 +15689,9 @@ def: "Supradorsals are small paired nodules of cartilage positioned at the dista synonym: "supradorsals" EXACT PLURAL [] xref: TAO:0001335 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001336 @@ -15698,9 +15701,9 @@ def: "Neural spines are extensions of neural arches dorsal to the neural canal i synonym: "neural spines" EXACT PLURAL [] xref: TAO:0001336 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001338 @@ -15709,10 +15712,10 @@ namespace: zebrafish_anatomy def: "Folded tube that has parts intestinal bulb, mid intestine and posterior intestine. The intestine is where digestion and nutrient absorption occurs." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-050120-6] xref: TAO:0001338 is_a: ZFA:0001490 ! cavitated compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001339 @@ -15722,8 +15725,8 @@ def: "Telencephalic nucleus from which the axons of the anterior commissure orig synonym: "ntAC" EXACT [] xref: TAO:0001339 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001340 @@ -15733,8 +15736,8 @@ def: "The nucleus containing the cell bodies of neurons whose axons form the pos synonym: "ntPOC" EXACT [] xref: TAO:0001340 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001341 @@ -15745,9 +15748,9 @@ synonym: "IZ" EXACT [] xref: TAO:0001341 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0001342 ! presumptive intervening zone -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001342 @@ -15756,9 +15759,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the intervening zone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001342 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001343 @@ -15767,9 +15770,9 @@ namespace: zebrafish_anatomy def: "Boundary between the telencephalon and diencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001343 is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001344 @@ -15779,9 +15782,9 @@ def: "The border between the dorsal and ventral thalamus." [GOC:mh, ORCiD:0000-0 synonym: "zli" EXACT [] xref: TAO:0001344 is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001215 ! thalamus -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001345 @@ -15791,9 +15794,9 @@ def: "An bilobed multi-tissue structure lateral to the notochord composed of an xref: TAO:0001345 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001346 ! interrenal primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000669 ! head kidney -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001346 @@ -15803,9 +15806,9 @@ def: "Multi-tissue structure located in the kidney that develops into the interr xref: TAO:0001346 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001206 ! intermediate mesoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001347 @@ -15816,9 +15819,9 @@ synonym: "SFGS" RELATED [] synonym: "strata fibrosum et griseum superficiales" EXACT PLURAL [] xref: TAO:0001347 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001348 @@ -15829,9 +15832,9 @@ synonym: "strata marginale" EXACT PLURAL [] synonym: "stratum fibrosum marginale" EXACT [ZFIN:ZDB-PUB-180207-5] xref: TAO:0001348 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001349 @@ -15841,9 +15844,9 @@ def: "Portion of tissue that is the most superficial layer of the tectal neuropi synonym: "strata opticum" EXACT PLURAL [] xref: TAO:0001349 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001350 @@ -15851,9 +15854,9 @@ name: stratum griseum centrale namespace: zebrafish_anatomy xref: TAO:0001350 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001351 @@ -15863,9 +15866,9 @@ def: "Has hypothalamic inputs." [ZFIN:ZDB-PUB-180207-5] synonym: "strata album centrales" EXACT PLURAL [] xref: TAO:0001351 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001355 @@ -15877,9 +15880,9 @@ synonym: "meninx primitiva" EXACT [] xref: TAO:0001355 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000045 ! neural crest -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001356 @@ -15889,8 +15892,8 @@ def: "The terminal nerve, located anterior to cranial nerve I, is comprised of a synonym: "nervus terminalis" EXACT [] xref: TAO:0001356 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001357 @@ -15899,9 +15902,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is ventrolateral to the roof plate and part of the midbrain." [ISBN:0444517383, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001357 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001358 @@ -15910,10 +15913,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the diencephalic region." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001358 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001359 @@ -15921,9 +15924,9 @@ name: pineal complex namespace: zebrafish_anatomy xref: TAO:0001359 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001360 @@ -15932,9 +15935,9 @@ namespace: zebrafish_anatomy def: "An unpaired left-sided accessory organ which plays a role in establishing lateral brain left right asymmetry." [ZFIN:ZDB-PUB-030206-1] xref: TAO:0001360 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001361 @@ -15944,8 +15947,8 @@ def: "Basiventrals are bilaterally paired cartilages lateral to the notochord wh synonym: "arcualia" RELATED [] xref: TAO:0001361 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001362 @@ -15958,9 +15961,9 @@ synonym: "transverse process" EXACT [] xref: TAO:0001362 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001361 ! basiventral -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001363 @@ -15971,9 +15974,9 @@ def: "The neural complex is the collective term for the ossified supraneurals (S synonym: "Weberian supraneural" EXACT [] xref: TAO:0001363 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001364 @@ -15983,9 +15986,9 @@ def: "Hemal spines are extensions of hemal arches in the ventral skeletogenous s synonym: "haemal spine" EXACT [] xref: TAO:0001364 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000519 ! hemal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001365 @@ -15995,9 +15998,9 @@ synonym: "motor nucleus V" EXACT [] synonym: "nV" EXACT [] xref: TAO:0001365 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001366 @@ -16007,9 +16010,9 @@ def: "Tract that extends from the postoptic commissure through a curved trajecto synonym: "TPOC" EXACT [] xref: TAO:0001366 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000059 ! postoptic commissure -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001367 @@ -16020,9 +16023,9 @@ synonym: "diencephalic-mesencephalic boundary" EXACT [] xref: TAO:0001367 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007040 ! forebrain midbrain boundary neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001368 @@ -16031,10 +16034,10 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the forebrain midbrain boundary." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001368 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001369 @@ -16048,8 +16051,8 @@ synonym: "ventral pancreatic anlage" EXACT [] xref: TAO:0001369 is_a: ZFA:0001390 ! pancreatic bud relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0001370 @@ -16062,8 +16065,8 @@ synonym: "dorsal pancreatic anlage" EXACT [] synonym: "dorsal posterior bud" RELATED [ZFIN:ZDB-PUB-030902-16] xref: TAO:0001370 is_a: ZFA:0001390 ! pancreatic bud -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001371 @@ -16072,10 +16075,10 @@ namespace: zebrafish_anatomy def: "System responsible for the production and movement of pancreatic hormones and enzymes." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001371 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001372 @@ -16085,9 +16088,9 @@ def: "Duct that collects and carries secretions of the exocrine pancreas." [GOC: xref: TAO:0001372 is_a: ZFA:0005162 ! digestive system duct relationship: develops_from ZFA:0001369 ! anterior pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0001373 @@ -16099,9 +16102,9 @@ synonym: "migratory slow muscle precursor cells" EXACT PLURAL [] xref: TAO:0001373 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000003 ! adaxial cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001374 @@ -16110,10 +16113,10 @@ namespace: zebrafish_anatomy def: "Myocardium of the heart atrium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001374 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001375 @@ -16124,10 +16127,10 @@ synonym: "bulboventricular valve" EXACT [] xref: TAO:0001375 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001376 @@ -16138,8 +16141,8 @@ def: "Presumptive structure at the animal poll of the blastula that will develop synonym: "presumptive epidermis" EXACT [] xref: TAO:0001376 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0001377 @@ -16148,8 +16151,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become mesoderm. Determined by fate mapping." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001377 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000021 ! gastrula:90%-epiboly +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0001378 @@ -16159,9 +16162,9 @@ def: "Region of the hypoblast that is located along the rostral-caudal axis of t xref: TAO:0001378 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000071 ! shield -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000117 ! hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001379 @@ -16169,9 +16172,9 @@ name: pharyngeal ectoderm namespace: zebrafish_anatomy xref: TAO:0001379 is_a: ZFA:0000016 ! ectoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001381 @@ -16182,9 +16185,9 @@ synonym: "hypohyals" EXACT PLURAL [] xref: TAO:0001381 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001382 @@ -16194,9 +16197,9 @@ def: "Epibranchials 1-3 in adults are compound elements formed by the fusion of synonym: "epibranchial uncinate processes" EXACT PLURAL [] xref: TAO:0001382 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000658 ! epibranchial bone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001383 @@ -16206,8 +16209,8 @@ def: "Surface structure that develops into a paired fin." [GOC:mh, ORCiD:0000-00 synonym: "fin buds" EXACT PLURAL [] xref: TAO:0001383 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000042 ! juvenile:days 30-44 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001384 @@ -16218,8 +16221,8 @@ synonym: "pelvic fin buds" EXACT PLURAL [] xref: TAO:0001384 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001454 ! pelvic fin field -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000042 ! juvenile:days 30-44 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001385 @@ -16229,9 +16232,9 @@ def: "Apical ectodermal ridge that is part of the pelvic fin bud." [GOC:cvs, ORC synonym: "apical ectodermal ridge pelvic fin buds" EXACT PLURAL [] xref: TAO:0001385 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001386 @@ -16241,9 +16244,9 @@ def: "Mesoderm part of pelvic fin bud." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "mesoderm pelvic fin buds" EXACT PLURAL [] xref: TAO:0001386 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001387 @@ -16252,9 +16255,9 @@ namespace: zebrafish_anatomy def: "Skeleton that supports the pelvic fin. The skeleton consists of consists of supporting endochondral radials and dermal fin rays or lepidotrichia." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001387 is_a: ZFA:0000027 ! paired fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001388 @@ -16263,9 +16266,9 @@ namespace: zebrafish_anatomy synonym: "epithelial mesenchymal boundarys" EXACT PLURAL [] xref: TAO:0001388 is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001269 ! regenerating fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001389 @@ -16277,9 +16280,9 @@ synonym: "wound epidermis" EXACT [] synonym: "wound epithelium" EXACT [] xref: TAO:0001389 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001269 ! regenerating fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001390 @@ -16290,9 +16293,9 @@ synonym: "pancreatic buds" EXACT PLURAL [] xref: TAO:0001390 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000254 ! pancreas primordium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001391 @@ -16302,8 +16305,8 @@ def: "The anterior lateral line ganglia develops from cranial ectodermal placode synonym: "anterior lateral line ganglia" EXACT PLURAL [] xref: TAO:0001391 is_a: ZFA:0000120 ! lateral line ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001392 @@ -16314,9 +16317,9 @@ synonym: "basipophysis 1" EXACT [] synonym: "lateral process 1" EXACT [] xref: TAO:0001392 is_a: ZFA:0001362 ! parapophysis -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001167 ! vertebra 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001393 @@ -16327,9 +16330,9 @@ synonym: "basipophysis" EXACT [] synonym: "lateral process 2" EXACT [] xref: TAO:0001393 is_a: ZFA:0001362 ! parapophysis -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001168 ! vertebra 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001394 @@ -16338,9 +16341,9 @@ namespace: zebrafish_anatomy def: "Neural arch 3 is expanded and fused to supraneural 3 as part of a neural complex roofing and protecting the neural canal." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001394 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001169 ! vertebra 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001395 @@ -16349,9 +16352,9 @@ namespace: zebrafish_anatomy def: "Neural arch 4 is expanded and fused to supraneural 3 as part of the neural complex. A reduced neural spine projects from the posterior margin of the neural complex." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001395 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001170 ! vertebra 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001396 @@ -16360,9 +16363,9 @@ namespace: zebrafish_anatomy def: "The parapophysis + rib, fused to the centrum, extends laterally then angles anteroventrally. A thin plate, the os suspensorium fuses to its median surface." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001396 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001170 ! vertebra 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001397 @@ -16372,8 +16375,8 @@ def: "Posterior to the Weberian apparatus, otophysan supraneurals form as median synonym: "post-Weberian supraneurals" EXACT PLURAL [] xref: TAO:0001397 is_a: ZFA:0000442 ! supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001399 @@ -16385,10 +16388,10 @@ synonym: "pterygoquadrate" EXACT [] synonym: "quadrate cartilage" EXACT [] xref: TAO:0001399 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0007117 ! Meckel's cartilage-palatoquadrate cartilage joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001400 @@ -16397,10 +16400,10 @@ namespace: zebrafish_anatomy def: "Pharyngeal arch cartilage that is bilaterally paired and the largest cartilaginous component of the ventral hyoid arch." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001400 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005885 ! operculohyoid ligament relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001401 @@ -16409,10 +16412,10 @@ namespace: zebrafish_anatomy synonym: "dorsal visceral arch 2" EXACT [] xref: TAO:0001401 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000444 ! suspensorium relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001402 @@ -16421,9 +16424,9 @@ namespace: zebrafish_anatomy synonym: "ventral visceral arch 2" EXACT [] xref: TAO:0001402 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001403 @@ -16433,10 +16436,10 @@ def: "Dermal bone that first appears as paired ossifications in the membrane (de synonym: "supra-ethmoid" RELATED [] xref: TAO:0001403 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001404 @@ -16448,10 +16451,10 @@ synonym: "preethmoid bones" EXACT PLURAL [] xref: TAO:0001404 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001405 ! ethmoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001405 @@ -16461,10 +16464,10 @@ def: "Bilaterally paired neurocranium cartilage which is initially plate-like an synonym: "ethmoid plate" EXACT [] xref: TAO:0001405 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000042 ! juvenile:days 30-44 relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001406 @@ -16474,11 +16477,11 @@ def: "Small median unpaired dermal sesamoid bone in the premaxillary-ethmoid lig xref: TAO:0001406 is_a: ZFA:0001590 ! dermal bone relationship: develops_from ZFA:0000585 ! kinethmoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001407 @@ -16487,9 +16490,9 @@ namespace: zebrafish_anatomy def: "Plate like dermal bone, variable in size, though usually one of the smallest in the series. Bears 2-3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001407 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001408 @@ -16498,9 +16501,9 @@ namespace: zebrafish_anatomy def: "Plate like dermal bone, variable in size, but usually largest in the series. Usually fused with IO4 (eg. Opsariichthys, Nelson (1969)). Usually bears 3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001408 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001409 @@ -16509,9 +16512,9 @@ namespace: zebrafish_anatomy def: "Plate like dermal bone. Usually fused with infraorbital 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001409 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001410 @@ -16520,9 +16523,9 @@ namespace: zebrafish_anatomy def: "Anatomical cluster that is a anteriolateral part of the cranium and structurally supports the eye." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001410 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001411 @@ -16534,10 +16537,10 @@ synonym: "sclerotic bones" EXACT PLURAL [] xref: TAO:0001411 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001509 ! sclerotic cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001412 @@ -16549,13 +16552,13 @@ synonym: "epioccipital" EXACT [] xref: TAO:0001412 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001500 ! auditory capsule -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005889 ! epiotic-posttemporal joint relationship: overlaps ZFA:0005891 ! epiotic-parietal joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001414 @@ -16565,9 +16568,9 @@ def: "Anatomical cluster that is located in the posterior region of the cranium synonym: "basicranial region" EXACT [] xref: TAO:0001414 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001415 @@ -16578,8 +16581,8 @@ synonym: "pelvic radials 2" EXACT PLURAL [] xref: TAO:0001415 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001541 ! pelvic radial 2 cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001416 @@ -16590,8 +16593,8 @@ synonym: "pelvic radials 3" EXACT PLURAL [] xref: TAO:0001416 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001540 ! pelvic radial 3 cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001417 @@ -16602,8 +16605,8 @@ synonym: "pelvic radials 1" EXACT PLURAL [] xref: TAO:0001417 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001542 ! pelvic radial 1 cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001418 @@ -16614,9 +16617,9 @@ synonym: "dorsal fin lepidotrichia" EXACT PLURAL [] synonym: "dorsal fin ray" EXACT [] xref: TAO:0001418 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001124 ! dorsal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001419 @@ -16626,9 +16629,9 @@ def: "A range of seven to nine rod-like internal median skeletal support structu synonym: "dorsal fin support" EXACT [] xref: TAO:0001419 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001124 ! dorsal fin skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001420 @@ -16638,9 +16641,9 @@ def: "A range of twelve to fourteen rod-like internal median skeletal support st synonym: "anal fin radial" RELATED [] xref: TAO:0001420 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000167 ! anal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001421 @@ -16651,9 +16654,9 @@ synonym: "anal fin lepidotrichia" EXACT PLURAL [] synonym: "anal fin ray" EXACT [] xref: TAO:0001421 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000167 ! anal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001422 @@ -16663,9 +16666,9 @@ def: "Bilaterally paired large cartilage that articulates with the chondrocraniu synonym: "hyomandibular cartilage" EXACT [] xref: TAO:0001422 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001423 @@ -16675,11 +16678,11 @@ def: "Rod-shaped paired cartilages on either side of the notochord. They unite, synonym: "parachordal cartilages" EXACT PLURAL [] xref: TAO:0001423 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001424 @@ -16691,9 +16694,9 @@ synonym: "chondocranium" EXACT [] synonym: "neurocranium" RELATED [] xref: TAO:0001424 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001425 @@ -16702,10 +16705,10 @@ namespace: zebrafish_anatomy synonym: "basal plate cartilages" EXACT PLURAL [] xref: TAO:0001425 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001423 ! parachordal cartilage relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001426 @@ -16716,8 +16719,8 @@ synonym: "excurrent nostril" EXACT [ZFIN:ZDB-PUB-961014-399] synonym: "posterior nares" EXACT PLURAL [] xref: TAO:0001426 is_a: ZFA:0000550 ! naris -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001427 @@ -16728,8 +16731,8 @@ synonym: "anterior nares" EXACT PLURAL [] synonym: "incurrent nostril" EXACT [ZFIN:ZDB-PUB-961014-399] xref: TAO:0001427 is_a: ZFA:0000550 ! naris -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001428 @@ -16740,9 +16743,9 @@ comment: Olfactory epithelium may be part of olfactory rosette. \nThe epithelium synonym: "olfactory rosettes" EXACT PLURAL [] xref: TAO:0001428 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001429 @@ -16752,9 +16755,9 @@ def: "Ventral hindbrain nuclei just caudal to the interpeduncular nucleus." [ZFI synonym: "median raphe nucleus" EXACT [ZFIN:ZDB-PUB-100202-7] xref: TAO:0001429 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000241 ! midline column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001430 @@ -16764,8 +16767,8 @@ def: "A duct connecting the esophagus to the posterior chamber of the swim bladd xref: TAO:0001430 is_a: ZFA:0005171 ! duct relationship: continuous_with ZFA:0000204 ! esophagus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001431 @@ -16773,9 +16776,9 @@ name: primitive olfactory epithelium namespace: zebrafish_anatomy xref: TAO:0001431 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000048 ! olfactory placode -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001432 @@ -16785,8 +16788,8 @@ def: "Sclerotic bone that is located anterior to the eye." [GOC:mh, ORCiD:0000-0 synonym: "anterior sclerotic bones" EXACT PLURAL [] xref: TAO:0001432 is_a: ZFA:0001411 ! sclerotic bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001433 @@ -16796,8 +16799,8 @@ def: "Sclerotic bone that is located posterior to the eye." [GOC:mh, ORCiD:0000- synonym: "posterior sclerotic bones" EXACT PLURAL [] xref: TAO:0001433 is_a: ZFA:0001411 ! sclerotic bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001434 @@ -16807,10 +16810,10 @@ def: "Floor plate that is part of the neural tube." [GOC:mh, GOC:ymb, ORCiD:0000 xref: TAO:0001434 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000887 ! floor plate neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001435 @@ -16819,9 +16822,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue on the side of the lumen of the neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001435 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001436 @@ -16830,10 +16833,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001436 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001437 @@ -16842,9 +16845,9 @@ namespace: zebrafish_anatomy def: "The constriction between the anterior and posterior chambers of the swim bladder. There does not appear to be an identifiable sphincter in the ductus, and therefore other musculature may regulate its opening." [ZFIN:ZDB-PUB-060306-11] xref: TAO:0001437 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001438 @@ -16854,9 +16857,9 @@ def: "Anatomical space, part of the trunk that contains the pericardial and pleu synonym: "body cavity" EXACT [] xref: TAO:0001438 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001439 @@ -16867,9 +16870,9 @@ synonym: "anatomical systems" EXACT PLURAL [] xref: CARO:0000011 xref: TAO:0001439 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001440 @@ -16878,9 +16881,9 @@ namespace: zebrafish_anatomy def: "The interface between the dorsal neuroepithelium and the roof plate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001440 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001441 @@ -16889,7 +16892,7 @@ namespace: zebrafish_anatomy def: "Posterior portion of the rhombic lip contained within rhombomeres 2-8. Gives rise to several brainstem nuclei and choroid plexus." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001441 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0000822 ! rhombomere 2 @@ -16898,7 +16901,7 @@ relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001440 ! rhombic lip -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001442 @@ -16907,10 +16910,10 @@ namespace: zebrafish_anatomy def: "Anterior-most region of dorsal hindbrain within rhombomere 1, adjacent the midbrain-hindbrain boundary." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001442 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001440 ! rhombic lip -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001443 @@ -16919,9 +16922,9 @@ namespace: zebrafish_anatomy def: "A tuft of capillaries that project into the ventricles of the brain and secretes cerebral spinal fluid. The choroid plexus is covered by a cuboidal epithelium which maintains the integrity of the blood-brain barrier." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001443 is_a: ZFA:0000099 ! brain vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001444 @@ -16931,9 +16934,9 @@ def: "Choroid plexus that is part of the third ventricle." [GOC:cvs, ORCiD:0000- synonym: "diencephalic choroid plexus " EXACT [] xref: TAO:0001444 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001445 @@ -16943,9 +16946,9 @@ def: "Choroid plexus that is part of the tectal ventricle." [GOC:cvs, ORCiD:0000 synonym: "choroid plexus tectal ventricles" EXACT PLURAL [] xref: TAO:0001445 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000159 ! tectal ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001446 @@ -16954,9 +16957,9 @@ namespace: zebrafish_anatomy def: "Choroid plexus that is part of the fourth ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001446 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000110 ! fourth ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001447 @@ -16965,9 +16968,9 @@ namespace: zebrafish_anatomy def: "Choroid plexus that is part of the telencephalic ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001447 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000696 ! telencephalic ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001448 @@ -16977,9 +16980,9 @@ def: "Glands that produce calcitonin. In adult fish the glands lie as two group synonym: "ultimobranchial bodies" EXACT PLURAL [] xref: TAO:0001448 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001449 @@ -16990,9 +16993,9 @@ synonym: "mesenchyme pelvic fins" EXACT PLURAL [] xref: TAO:0001449 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0001386 ! mesoderm pelvic fin bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001450 @@ -17003,9 +17006,9 @@ synonym: "apical ectodermal ridge pelvic fins" EXACT PLURAL [] xref: TAO:0001450 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: develops_from ZFA:0001385 ! apical ectodermal ridge pelvic fin bud -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001451 @@ -17015,9 +17018,9 @@ def: "A small group of mesodermal cells located at the posterior margin of the d synonym: "ZPA" RELATED [] xref: TAO:0001451 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000789 ! mesoderm pectoral fin bud -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001452 @@ -17027,9 +17030,9 @@ def: "A small group of mesodermal cells located at the posterior margin of the d synonym: "ZPA" RELATED [] xref: TAO:0001452 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001386 ! mesoderm pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001453 @@ -17039,9 +17042,9 @@ def: "Embryonic region that develops into the pectoral fin bud." [GOC:mh, ORCiD: synonym: "pectoral fin fields" EXACT PLURAL [] xref: TAO:0001453 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001454 @@ -17051,9 +17054,9 @@ def: "Portion of tissue in the pelvic region that develops into the pelvic fin b synonym: "pelvic fin fields" EXACT PLURAL [] xref: TAO:0001454 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001455 @@ -17064,9 +17067,9 @@ synonym: "coraco-scapular cartilage" EXACT [] synonym: "scapulo-coracoid cartilage" EXACT [] xref: TAO:0001455 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001456 @@ -17076,8 +17079,8 @@ def: "A plate-like chondrogenic condensation within the pectoral fin, which subd synonym: "fin plate cartilage" EXACT [] xref: TAO:0001456 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001457 @@ -17087,9 +17090,9 @@ def: "Cartilage which is part of the axial skeleton." [GOC:mh, ORCiD:0000-0001-9 synonym: "postcranial axial cartilages" EXACT PLURAL [] xref: TAO:0001457 is_a: ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001458 @@ -17099,9 +17102,9 @@ def: "Cartilage which is part of the cranium." [GOC:mh, ORCiD:0000-0001-9114-873 synonym: "cranial cartilages" EXACT PLURAL [] xref: TAO:0001458 is_a: ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001459 @@ -17111,9 +17114,9 @@ def: "Cartilage which is part of the pelvic fin." [GOC:mh, ORCiD:0000-0001-9114- synonym: "pelvic fin cartilages" EXACT PLURAL [] xref: TAO:0001459 is_a: ZFA:0001543 ! paired fin cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001460 @@ -17123,9 +17126,9 @@ synonym: "pharyngeal arch cartilages" EXACT PLURAL [] synonym: "splanchnocranium cartilage" EXACT [] xref: TAO:0001460 is_a: ZFA:0001458 ! cranial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001461 @@ -17135,9 +17138,9 @@ def: "Cartilage that is part of the chondrocranium." [GOC:cvs, ORCiD:0000-0002-2 synonym: "neurocranium cartilage" EXACT [] xref: TAO:0001461 is_a: ZFA:0001458 ! cranial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001462 @@ -17148,9 +17151,9 @@ synonym: "somite border cell" EXACT PLURAL [] synonym: "somite boundary" RELATED [] xref: TAO:0001462 is_a: ZFA:0005594 ! anatomical surface -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001463 @@ -17160,9 +17163,9 @@ def: "Surface structure composed of an array of melanophores arranged in a strip synonym: "melanophore stripes" EXACT PLURAL [] xref: TAO:0001463 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001464 @@ -17172,9 +17175,9 @@ def: "The layer within the retina where the photoreceptor cell bodies reside." [ synonym: "retinal outer nuclear layers" EXACT PLURAL [] xref: TAO:0001464 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001465 @@ -17184,9 +17187,9 @@ def: "Layer of the retina composed of the inner segments of the photoreceptor ce synonym: "photoreceptor inner segment layers" EXACT PLURAL [] xref: TAO:0001465 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001466 @@ -17196,9 +17199,9 @@ def: "Layer of the retina composed of the outer segments of the photoreceptor ce synonym: "photoreceptor outer segment layers" EXACT PLURAL [] xref: TAO:0001466 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001467 @@ -17206,9 +17209,9 @@ name: pharyngeal mesoderm namespace: zebrafish_anatomy xref: TAO:0001467 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001468 @@ -17217,8 +17220,8 @@ namespace: zebrafish_anatomy def: "The anterior lateral line system develops from cranial ectodermal placodes, situated between the eye and the ear, that give rise to both the neuromasts and the anterior lateral line sensory nerves that innervate the neuromasts. The anterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians and are innervated by several lateral line nerves, which project to the hindbrain. The anterior lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001468 is_a: ZFA:0000034 ! lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001469 @@ -17228,9 +17231,9 @@ def: "The lateral line consists of small sensory patches (neuromasts) located su synonym: "lateral lines" EXACT PLURAL [] xref: TAO:0001469 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001470 @@ -17241,9 +17244,9 @@ synonym: "anterior lateral lines" EXACT PLURAL [] xref: TAO:0001470 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005117 ! anterior lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001471 @@ -17252,8 +17255,8 @@ namespace: zebrafish_anatomy def: "The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001471 is_a: ZFA:0000034 ! lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001472 @@ -17263,9 +17266,9 @@ def: "Neuromast that is part of the anterior lateral line. (Also see Anatomical synonym: "neuromast anterior" EXACT [] xref: TAO:0001472 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001473 @@ -17276,8 +17279,8 @@ subset: cell_slim synonym: "deep blastomeres" EXACT PLURAL [] xref: TAO:0001473 is_a: ZFA:0000093 ! blastomere -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000007 ! Cleavage:64-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000007 ! cleavage:64-cell [Term] id: ZFA:0001474 @@ -17305,8 +17308,8 @@ def: "Anatomical structure, that consists of similar cells and intercellular mat xref: CARO:0000043 xref: TAO:0001477 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000012 ! Blastula:High +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001478 @@ -17316,8 +17319,8 @@ def: "Anatomical group that has its parts adjacent to one another." [GOC:mh, ORC xref: CARO:0000041 xref: TAO:0001478 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000012 ! Blastula:High +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001479 @@ -17327,9 +17330,9 @@ def: "Cranial nerves that carry afferent and efferent fibers for the lateral lin synonym: "lateral line nerves" EXACT PLURAL [] xref: TAO:0001479 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001480 @@ -17340,9 +17343,9 @@ synonym: "anterodorsal lateral line nerve" EXACT [] synonym: "dorsal anterior lateral line nerves" EXACT PLURAL [] xref: TAO:0001480 is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000425 ! anterior lateral line nerve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001481 @@ -17353,9 +17356,9 @@ synonym: "anteroventral lateral line nerve" EXACT [] synonym: "ventral anterior lateral line nerves" EXACT PLURAL [] xref: TAO:0001481 is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000425 ! anterior lateral line nerve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001482 @@ -17365,10 +17368,10 @@ def: "Nerve fibers originating from the middle lateral line ganglion. These fib synonym: "middle lateral line nerves" EXACT PLURAL [] xref: TAO:0001482 is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000175 ! posterior lateral line nerve relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001483 @@ -17378,9 +17381,9 @@ def: "The middle lateral line ganglion develops from a cranial ectodermal placod synonym: "middle lateral line ganglia" EXACT PLURAL [] xref: TAO:0001483 is_a: ZFA:0000120 ! lateral line ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001484 @@ -17391,8 +17394,8 @@ subset: cell_slim synonym: "superficial blastomeres" EXACT PLURAL [] xref: TAO:0001484 is_a: ZFA:0000093 ! blastomere -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000007 ! Cleavage:64-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000007 ! cleavage:64-cell [Term] id: ZFA:0001485 @@ -17403,8 +17406,8 @@ synonym: "basal laminae" EXACT PLURAL [] xref: CARO:0000065 xref: TAO:0001485 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001486 @@ -17414,8 +17417,8 @@ def: "Portion of tissue, that consists of one or more layers of epithelial cells xref: CARO:0000066 xref: TAO:0001486 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001487 @@ -17425,9 +17428,9 @@ def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; xref: CARO:0000004 xref: TAO:0001487 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001488 @@ -17438,8 +17441,8 @@ synonym: "multi-tissue structures" EXACT PLURAL [] xref: CARO:0000055 xref: TAO:0001488 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001489 @@ -17450,8 +17453,8 @@ synonym: "compound organ components" EXACT PLURAL [] xref: CARO:0000019 xref: TAO:0001489 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001490 @@ -17462,8 +17465,8 @@ synonym: "cavitated compound organs" EXACT PLURAL [] xref: CARO:0000072 xref: TAO:0001490 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001491 @@ -17474,8 +17477,8 @@ synonym: "solid compound organs" EXACT PLURAL [] xref: CARO:0000074 xref: TAO:0001491 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001492 @@ -17486,8 +17489,8 @@ synonym: "simple organs" EXACT PLURAL [] xref: CARO:0000021 xref: TAO:0001492 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001493 @@ -17498,8 +17501,8 @@ synonym: "atypical epithelia" EXACT PLURAL [] xref: CARO:0000071 xref: TAO:0001493 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001494 @@ -17509,8 +17512,8 @@ def: "Epithelium that consists of more than one layer of epithelial cells." [GOC xref: CARO:0000069 xref: TAO:0001494 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001495 @@ -17521,8 +17524,8 @@ synonym: "unilaminar epithelia" EXACT PLURAL [] xref: CARO:0000073 xref: TAO:0001495 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001496 @@ -17533,8 +17536,8 @@ synonym: "simple columnar epithelia" EXACT PLURAL [] xref: CARO:0000068 xref: TAO:0001496 is_a: ZFA:0001495 ! unilaminar epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001497 @@ -17545,8 +17548,8 @@ synonym: "simple cuboidal epithelia" EXACT PLURAL [] xref: CARO:0000067 xref: TAO:0001497 is_a: ZFA:0001495 ! unilaminar epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001498 @@ -17557,8 +17560,8 @@ synonym: "simple squamous epithelia" EXACT PLURAL [] xref: CARO:0000070 xref: TAO:0001498 is_a: ZFA:0001495 ! unilaminar epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001499 @@ -17567,10 +17570,10 @@ namespace: zebrafish_anatomy def: "Simple columnar epithelium that lines the esophagus." [ZFIN:ZDB-PUB-070426-1] xref: TAO:0001499 is_a: ZFA:0001496 ! simple columnar epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000204 ! esophagus relationship: part_of ZFA:0005123 ! gut epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001500 @@ -17580,9 +17583,9 @@ def: "Bilaterally paired cartilage encasing the semicircular canals of the inner synonym: "otic capsule" EXACT [] xref: TAO:0001500 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001501 @@ -17593,8 +17596,8 @@ synonym: "cartilages" EXACT PLURAL [] xref: TAO:0001501 xref: VSAO:0000000 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001502 @@ -17603,9 +17606,9 @@ namespace: zebrafish_anatomy def: "Bilaterally paired medial bar of cartilage formed at midorbit through medial chondrification from triangles of cartilage that later form the junction of the taeniae marginales anterior, taeniae marginales posterior and the epiphyseal bar." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001502 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001503 @@ -17615,9 +17618,9 @@ def: "Cranial cartilage which is bilaterally paired and develops as a dorsal pla synonym: "laminas orbitonasalis" EXACT PLURAL [] xref: TAO:0001503 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001504 @@ -17627,9 +17630,9 @@ def: "Cranial cartilage which is a paired anterodorsal projection of the posteri synonym: "occipital arch cartilages" EXACT PLURAL [] xref: TAO:0001504 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001505 @@ -17640,10 +17643,10 @@ synonym: "orbital cartilage" RELATED [] synonym: "taeniae marginales anterior" EXACT PLURAL [] xref: TAO:0001505 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001506 @@ -17652,9 +17655,9 @@ namespace: zebrafish_anatomy def: "Unpaired thin dorsal sheet of cartilage that partially covers the posterior chondrocranium." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001506 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001507 @@ -17664,10 +17667,10 @@ def: "Paired thin medially aligned bar of cartilage that extends from the anteri synonym: "trabeculae cranii" EXACT PLURAL [] xref: TAO:0001507 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001321 ! neurocranial trabecula relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001508 @@ -17677,10 +17680,10 @@ def: "Cartilage formed via medial fusion between bilaterally paired trabecula cr synonym: "trabecular bar" EXACT [] xref: TAO:0001508 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001321 ! neurocranial trabecula relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001509 @@ -17691,8 +17694,8 @@ synonym: "scleral cartilage" RELATED [] synonym: "sclerotic cartilages" EXACT PLURAL [] xref: TAO:0001509 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001510 @@ -17702,9 +17705,9 @@ def: "Pharyngeal arch cartilage that is median and is the anterior-most cartilag synonym: "basihyal" RELATED [] xref: TAO:0001510 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001511 @@ -17716,9 +17719,9 @@ synonym: "interhyal bone" EXACT [] synonym: "stylohyal" EXACT [] xref: TAO:0001511 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001512 @@ -17729,8 +17732,8 @@ def: "Anatomical structure consisting of at least two non-overlapping organs, mu xref: CARO:0000054 xref: TAO:0001512 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001513 @@ -17741,8 +17744,8 @@ synonym: "dermomyotomes" EXACT PLURAL [] xref: TAO:0001513 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000155 ! somite -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001514 @@ -17753,8 +17756,8 @@ synonym: "bones" EXACT PLURAL [] xref: TAO:0001514 xref: VSAO:0000057 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001515 @@ -17765,10 +17768,10 @@ synonym: "orbital cartilage" RELATED [] synonym: "taeniae marginales posterior" EXACT PLURAL [] xref: TAO:0001515 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001516 @@ -17778,9 +17781,9 @@ def: "Pharyngeal arch cartilage that forms the largest skeletal element of the v synonym: "ceratobranchial cartilages" EXACT PLURAL [] xref: TAO:0001516 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001517 @@ -17789,9 +17792,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001517 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001518 @@ -17800,9 +17803,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001518 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001519 @@ -17811,9 +17814,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001519 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001520 @@ -17822,9 +17825,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that forms between hypobranchial 1 and epibranchial 1." [TAO:curator] xref: TAO:0001520 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001521 @@ -17833,9 +17836,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is the most posterior, bilaterally paired ventral pharyngeal arch cartilage." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001521 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001522 @@ -17845,9 +17848,9 @@ def: "Small rod-like cartilage that forms between the median copulae and the cer synonym: "hypobranchial cartilages" EXACT PLURAL [] xref: TAO:0001522 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001523 @@ -17857,9 +17860,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 4; t synonym: "hypobranchial 4 cartilages" EXACT PLURAL [] xref: TAO:0001523 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001524 @@ -17869,9 +17872,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 1, l synonym: "hypobranchial 1 cartilages" EXACT PLURAL [] xref: TAO:0001524 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001525 @@ -17881,9 +17884,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 2, l synonym: "hypobranchial 2 cartilages" EXACT PLURAL [] xref: TAO:0001525 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001526 @@ -17893,9 +17896,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 3, l synonym: "hypobranchial 3 cartilages" EXACT PLURAL [] xref: TAO:0001526 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001527 @@ -17905,9 +17908,9 @@ def: "Pharyngeal arch cartilage that is bilaterally paired small rod-like cartil synonym: "epibranchial cartilages" EXACT PLURAL [] xref: TAO:0001527 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001528 @@ -17916,9 +17919,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone and the medial end of pharyngobranchial 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001528 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001529 @@ -17927,9 +17930,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone and the medial end of pharyngobranchial 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001529 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001530 @@ -17938,9 +17941,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone and the medial end of pharyngobranchial 2." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001530 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001531 @@ -17949,9 +17952,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone and the medial end of pharyngobranchial 4." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001531 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001532 @@ -17968,8 +17971,8 @@ def: "Paired cartilages that project medially from the medial tips of epibranchi synonym: "pharyngobranchial cartilages" EXACT PLURAL [] xref: TAO:0001533 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001534 @@ -17979,9 +17982,9 @@ def: "Paired elongate cartilages that lie posteromedial to epibranchial 2 and me synonym: "pharyngobranchial 3 cartilages" EXACT PLURAL [] xref: TAO:0001534 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001535 @@ -17990,8 +17993,8 @@ namespace: zebrafish_anatomy synonym: "median fin cartilages" EXACT PLURAL [] xref: TAO:0001535 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001536 @@ -18001,9 +18004,9 @@ def: "Paired disc-like cartilage lying medial to and between the medial tips of synonym: "pharyngobranchial 2 cartilages" EXACT PLURAL [] xref: TAO:0001536 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001537 @@ -18013,8 +18016,8 @@ def: "Cartilage that develops initially on the medial side of the coraco-scapula synonym: "mesocorocoid cartilages" EXACT PLURAL [] xref: TAO:0001537 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001538 @@ -18024,8 +18027,8 @@ def: "Small cartilage that forms at the posterior edge of the basipterygium." [G synonym: "pelvic radial cartilages" EXACT PLURAL [] xref: TAO:0001538 is_a: ZFA:0001459 ! pelvic fin cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001539 @@ -18035,8 +18038,8 @@ def: "Bilaterally paired small, rodlike cartilages on the ventral surface of the synonym: "basipterygium cartilages" EXACT PLURAL [] xref: TAO:0001539 is_a: ZFA:0001459 ! pelvic fin cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001540 @@ -18046,8 +18049,8 @@ def: "Small cartilage that forms at the posterior and medial edge of the basipte synonym: "pelvic radials 3 cartilages" EXACT PLURAL [] xref: TAO:0001540 is_a: ZFA:0001538 ! pelvic radial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001541 @@ -18057,8 +18060,8 @@ def: "Small cartilage with a long posterior process and a shorter lateral one th synonym: "pelvic radials 2 cartilages" EXACT PLURAL [] xref: TAO:0001541 is_a: ZFA:0001538 ! pelvic radial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001542 @@ -18068,8 +18071,8 @@ def: "Small cartilage that forms at the posterior and lateral edge of the basipt synonym: "pelvic radials 1 cartilages" EXACT PLURAL [] xref: TAO:0001542 is_a: ZFA:0001538 ! pelvic radial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001543 @@ -18079,9 +18082,9 @@ def: "Cartilage which is part of one of the paired fins." [GOC:mh, ORCiD:0000-00 synonym: "paired fin cartilages" EXACT PLURAL [] xref: TAO:0001543 is_a: ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000027 ! paired fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001544 @@ -18136,9 +18139,9 @@ synonym: "caudal fin lepidotrichia" EXACT PLURAL [] synonym: "caudal fin ray" EXACT [] xref: TAO:0001550 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001551 @@ -18149,9 +18152,9 @@ synonym: "pectoral fin lepidotrichia" EXACT PLURAL [] synonym: "pectoral fin ray" EXACT [] xref: TAO:0001551 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001552 @@ -18162,9 +18165,9 @@ synonym: "pelvic fin lepidotrichia" EXACT PLURAL [] synonym: "pelvic fin ray" EXACT [] xref: TAO:0001552 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001553 @@ -18183,8 +18186,8 @@ synonym: "fin ray" EXACT [] synonym: "lepidotrichia" EXACT PLURAL [] xref: TAO:0001554 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001555 @@ -18195,8 +18198,8 @@ synonym: "epibranchial ganglia" EXACT PLURAL [] xref: TAO:0001555 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001556 @@ -18206,9 +18209,9 @@ def: "Trunk ganglion which is part of a bilaterally paired set of sympathetic ga synonym: "paravertebral ganglion" EXACT [] xref: TAO:0001556 is_a: ZFA:0001573 ! trunk ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001557 @@ -18220,9 +18223,9 @@ synonym: "pronephric glomeruli" EXACT PLURAL [] synonym: "pronephric glomus " EXACT [] xref: TAO:0001557 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001558 @@ -18232,9 +18235,9 @@ def: "Bilaterally paired tubes connecting the pronephric glomeruli to the pronep synonym: "ciliated neck segment" EXACT [] xref: TAO:0001558 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001559 @@ -18242,9 +18245,9 @@ name: vertebral column namespace: zebrafish_anatomy xref: TAO:0001559 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001560 @@ -18253,8 +18256,8 @@ namespace: zebrafish_anatomy def: "Ventral most hypural of the caudal fin. Supports the lower lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001560 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001561 @@ -18263,8 +18266,8 @@ namespace: zebrafish_anatomy def: "Hypural of the caudal fin dorsal to hypural 1. Supports the lower lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001561 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0001562 @@ -18273,8 +18276,8 @@ namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 2 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001562 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001563 @@ -18283,8 +18286,8 @@ namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 3 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001563 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001564 @@ -18293,8 +18296,8 @@ namespace: zebrafish_anatomy def: "Dorsal-most hypural, that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001564 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001565 @@ -18309,9 +18312,9 @@ synonym: "previtellogenic oocyte" RELATED [ZFIN:ZDB-PUB-140513-387] synonym: "Stage 2 oocyte" EXACT [] xref: TAO:0001565 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001265 ! ovarian follicle stage II -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001566 @@ -18326,9 +18329,9 @@ synonym: "Stage 3 oocyte" EXACT [] synonym: "vitellogenic oocytes" EXACT [] xref: TAO:0001566 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001266 ! ovarian follicle stage III -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001567 @@ -18343,9 +18346,9 @@ synonym: "primary oocyte" EXACT [] synonym: "Stage 1 oocyte" EXACT [] xref: TAO:0001567 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001263 ! ovarian follicle stage I -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001568 @@ -18360,9 +18363,9 @@ synonym: "postvitellogenic oocyte" RELATED [ZFIN:ZDB-PUB-140513-387] synonym: "Stage 4 oocyte" EXACT [] xref: TAO:0001568 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001264 ! ovarian follicle stage IV -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001569 @@ -18375,8 +18378,8 @@ synonym: "mature egg" EXACT [] synonym: "unactivated egg" EXACT [] xref: TAO:0001569 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001570 @@ -18391,8 +18394,8 @@ xref: CL:0000025 xref: TAO:0001570 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001569 ! oocyte stage V -relationship: end ZFS:0000001 ! Zygote:1-cell -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000001 ! zygote:1-cell +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001571 @@ -18402,8 +18405,8 @@ def: "A follicle that has undergone ovulation and no longer contains an oocyte." synonym: "postovulatory follicles" EXACT PLURAL [] xref: TAO:0001571 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001572 @@ -18414,9 +18417,9 @@ synonym: "SCG" RELATED [] synonym: "superior sympathetic cervical ganglion" EXACT [] xref: TAO:0001572 is_a: ZFA:0001573 ! trunk ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001573 @@ -18426,8 +18429,8 @@ def: "Ganglion which is located in the trunk." [GOC:mh, ORCiD:0000-0001-9114-873 synonym: "trunk ganglia" EXACT PLURAL [] xref: TAO:0001573 is_a: ZFA:0000190 ! ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001574 @@ -18437,8 +18440,8 @@ def: "Nervous system that innervates smooth muscle, cardiac muscle and glands. synonym: "ANS" EXACT [] xref: TAO:0001574 is_a: ZFA:0000396 ! nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001575 @@ -18447,8 +18450,8 @@ namespace: zebrafish_anatomy def: "Autonomic nervous system where the cell bodies lie in the brain and sacral region of the spinal cord. The neurons are mainly cholinergic." [GOC:GOC, GOC:ymb, ISBN:0080923437, ORCiD:0000-0002-9900-7880] xref: TAO:0001575 is_a: ZFA:0001574 ! autonomic nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001576 @@ -18457,8 +18460,8 @@ namespace: zebrafish_anatomy def: "Autonomic nervous system that originates beginning at the thoracic and lumbar areas of the spinal cord. Sympathetic neurons are primarily adrenergic producing the neurotransmitter noradrenalin along with other neuropeptides." [GOC:cvs, GOC:ymb, ISBN:0080923437, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001576 is_a: ZFA:0001574 ! autonomic nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001577 @@ -18468,9 +18471,9 @@ def: "Process of the premaxilla that extends posteriorly and overlays the meseth synonym: "premaxilla ascending processes" EXACT PLURAL [] xref: TAO:0001577 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000567 ! premaxilla -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001578 @@ -18480,9 +18483,9 @@ def: "In cypriniforms the anterior portion of the palatine has a dorsomedial pro synonym: "anterior dorsomedial process of autopalatines" EXACT PLURAL [] xref: TAO:0001578 is_a: ZFA:0001637 ! bony projection -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000620 ! autopalatine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001579 @@ -18491,9 +18494,9 @@ namespace: zebrafish_anatomy def: "Ural vertebra that is the second vertebra posterior to preural centrum 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001579 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001580 @@ -18503,9 +18506,9 @@ def: "Anatomical cluster that is the regional skeletal system surrounding the br synonym: "braincase" EXACT [] xref: TAO:0001580 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001581 @@ -18514,9 +18517,9 @@ namespace: zebrafish_anatomy def: "A vertebral centrum that is located immediately posterior to ural centrum 1. Ural centrum 2 is an unpaired median bone." [TAO:curator] xref: TAO:0001581 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001579 ! ural vertebra 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001582 @@ -18526,8 +18529,8 @@ def: "Precaudal vertebra that is not a Weberian vertebra. Vertebra 5 through 14 synonym: "non-Weberian precaudal vertebrae" EXACT PLURAL [] xref: TAO:0001582 is_a: ZFA:0000263 ! precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001583 @@ -18537,9 +18540,9 @@ def: "Vertebra which is the fused centra of preural 1 and ural 1. These elements synonym: "urostyle " RELATED [] xref: TAO:0001583 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001584 @@ -18550,8 +18553,8 @@ synonym: "caudal procurrent lepidotrichium" EXACT [] synonym: "caudal procurrent ray " RELATED [] xref: TAO:0001584 is_a: ZFA:0001550 ! caudal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001585 @@ -18562,8 +18565,8 @@ synonym: "caudal principal lepidotrichium" EXACT [] synonym: "caudal principal ray" EXACT [] xref: TAO:0001585 is_a: ZFA:0001550 ! caudal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001586 @@ -18574,9 +18577,9 @@ synonym: "pectoral fin radials" EXACT PLURAL [] xref: TAO:0001586 is_a: ZFA:0000271 ! radial relationship: develops_from ZFA:0001456 ! pectoral fin endoskeletal disc -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001587 @@ -18585,8 +18588,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin radial which develops from the pectoral fin endoskeletal disc, supports a few pectoral lepidotrichia or fin rays and connects the lepidotrichia and distal radials with the primary pectoral girdle (scapula and coracoid)." [TAO:curator] xref: TAO:0001587 is_a: ZFA:0001586 ! pectoral fin radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001588 @@ -18596,8 +18599,8 @@ def: "Pectoral fin radial, develops from the pectoral fin endoskeletal disc, and synonym: "pectoral fin distal radials" EXACT PLURAL [] xref: TAO:0001588 is_a: ZFA:0001586 ! pectoral fin radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001589 @@ -18607,8 +18610,8 @@ def: "The propterygium is the lateralmost or anteriormost basal cartilage that o synonym: "propterygia" EXACT PLURAL [] xref: TAO:0001589 is_a: ZFA:0001588 ! pectoral fin distal radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001590 @@ -18618,8 +18621,8 @@ def: "Intramembranous bone that forms superficially in the organism. Dermal bon synonym: "dermal bones" EXACT PLURAL [] xref: TAO:0001590 is_a: ZFA:0001635 ! intramembranous bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001591 @@ -18631,8 +18634,8 @@ xref: TAO:0001591 is_a: ZFA:0001693 ! chondral bone is_a: ZFA:0005620 ! endochondral element relationship: develops_from ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001592 @@ -18644,8 +18647,8 @@ is_a: ZFA:0000461 ! Weberian ossicle is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: develops_from ZFA:0000637 ! claustrum cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001593 @@ -18655,9 +18658,9 @@ def: "An endochondral bone that is the ventral, posteriorly-oriented bony extens synonym: "quadrate ventral processes" EXACT PLURAL [] xref: TAO:0000224 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000621 ! quadrate -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001594 @@ -18670,10 +18673,10 @@ synonym: "preopercle lower limb" EXACT [] synonym: "preopercle ventral arm" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0000289 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005631 ! preopercle horizontal limb-symplectic joint relationship: part_of ZFA:0000264 ! preopercle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001595 @@ -18686,10 +18689,10 @@ synonym: "preopercle upper limb" EXACT [] synonym: "preopercle vertical arm" EXACT [] xref: TAO:0000336 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005632 ! preopercle vertical limb-hyomandibula joint relationship: part_of ZFA:0000264 ! preopercle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001596 @@ -18699,9 +18702,9 @@ def: "Anatomical cluster which consists of two or more adjacent bones or cartila synonym: "joints" EXACT PLURAL [] xref: TAO:0000367 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000434 ! skeletal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001597 @@ -18711,10 +18714,10 @@ def: "Endochondral bone which is the posteroventral region of the exoccipital bo synonym: "exoccipitals posteroventral regions" EXACT PLURAL [] xref: TAO:0000348 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000661 ! exoccipital relationship: part_of ZFA:0001627 ! lagenar capsule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001598 @@ -18723,10 +18726,10 @@ namespace: zebrafish_anatomy def: "Endochondral bone which is the posterodorsal region of the basioccipital bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000337 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000472 ! basioccipital relationship: part_of ZFA:0001627 ! lagenar capsule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001599 @@ -18734,9 +18737,9 @@ name: os suspensorium medial flange namespace: zebrafish_anatomy xref: TAO:0002214 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001171 ! os suspensorium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001600 @@ -18745,8 +18748,8 @@ namespace: zebrafish_anatomy def: "Neural spine that is located on the fourth vertebra." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001546 is_a: ZFA:0001336 ! neural spine -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001601 @@ -18759,9 +18762,9 @@ synonym: "horizontal process" EXACT [] synonym: "manubrium incudus" EXACT [] xref: TAO:0001553 is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001602 @@ -18770,9 +18773,9 @@ namespace: zebrafish_anatomy def: "Bony process that develops as a dorsally projecting cartilaginous extension from the basidorsal. The ascending process is longer relative to the manubrium in larvae (5.1-11.0 mm). By 13.0 mm, the ascending process appears highly reduced in size." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001548 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001603 @@ -18782,9 +18785,9 @@ def: "Portion of the intercalarium that ossifies from the cartilage condensatio synonym: "articular process" RELATED [] xref: TAO:0001549 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001604 @@ -18794,9 +18797,9 @@ def: "Surface structure that is the dorsal portion of the caudal fin." [GOC:cvs, synonym: "caudal fin dorsal lobe" EXACT [] xref: TAO:0001593 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001605 @@ -18806,9 +18809,9 @@ def: "Surface structure that is the ventral portion of the caudal fin." [GOC:cvs synonym: "caudal fin ventral lobe" EXACT [] xref: TAO:0001594 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001606 @@ -18819,8 +18822,8 @@ synonym: "gill arch 1" EXACT [] synonym: "visceral arch 3" EXACT [] xref: TAO:0001598 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001607 @@ -18831,8 +18834,8 @@ synonym: "gill arch 2" EXACT [] synonym: "visceral arch 4" EXACT [] xref: TAO:0001599 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001608 @@ -18843,8 +18846,8 @@ synonym: "gill arch 3" EXACT [] synonym: "visceral arch 5" EXACT [] xref: TAO:0001600 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001609 @@ -18855,8 +18858,8 @@ synonym: "gill arch 4" EXACT [] synonym: "visceral arch 6" EXACT [] xref: TAO:0001601 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001610 @@ -18867,8 +18870,8 @@ synonym: "gill arch 5" EXACT [] synonym: "visceral arch 7" EXACT [] xref: TAO:0001602 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001611 @@ -18879,8 +18882,8 @@ synonym: "hyoid arch" EXACT [] synonym: "visceral arch 2" EXACT [] xref: TAO:0001596 is_a: ZFA:0001306 ! pharyngeal arch -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001612 @@ -18891,8 +18894,8 @@ synonym: "mandibular arch" EXACT [] synonym: "visceral arch 1" EXACT [] xref: TAO:0001595 is_a: ZFA:0001306 ! pharyngeal arch -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001613 @@ -18910,10 +18913,10 @@ synonym: "visceral arches 3-7" EXACT [] xref: TAO:0000625 xref: TAO:0001597 is_a: ZFA:0001306 ! pharyngeal arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001614 @@ -18922,9 +18925,9 @@ namespace: zebrafish_anatomy def: "Endocardium that is part of the atrium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002169 is_a: ZFA:0001320 ! endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001615 @@ -18933,9 +18936,9 @@ namespace: zebrafish_anatomy def: "Endocardium that is part of the cardiac ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002247 is_a: ZFA:0001320 ! endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001616 @@ -18944,9 +18947,9 @@ namespace: zebrafish_anatomy def: "Endocardium that is part of the atrioventricular canal." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002170 is_a: ZFA:0001320 ! endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001315 ! atrioventricular canal -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001617 @@ -18959,10 +18962,10 @@ synonym: "immature otoliths" RELATED PLURAL [] synonym: "statolith" EXACT [] xref: TAO:0001621 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000051 ! otic vesicle relationship: part_of ZFA:0000559 ! otolith organ -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001618 @@ -18979,9 +18982,9 @@ synonym: "nerve fiber layer" EXACT [] synonym: "optic fiber layers" EXACT PLURAL [] xref: TAO:0002212 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001620 @@ -18991,9 +18994,9 @@ def: "Most anterior portion of the pronephric duct (or tubule as described by Wi synonym: "PCT" EXACT [] xref: TAO:0002238 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001621 @@ -19003,9 +19006,9 @@ def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2 synonym: "proximal straight tubules" EXACT PLURAL [] xref: TAO:0002239 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001622 @@ -19015,9 +19018,9 @@ def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2 synonym: "pronephric distal early tubules" EXACT PLURAL [] xref: TAO:0002236 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001623 @@ -19027,9 +19030,9 @@ def: "Most posterior portion of the pronephric duct (or tubule as described by W synonym: "posterior pronephric ducts" EXACT PLURAL [] xref: TAO:0002225 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001624 @@ -19038,9 +19041,9 @@ namespace: zebrafish_anatomy def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the distal early tubule." [ZFIN:ZDB-PUB-071029-9] synonym: "distal late tubules" EXACT PLURAL [] is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001625 @@ -19050,9 +19053,9 @@ def: "Portion of cranial nerve II where large fascicles of axons from the optic synonym: "optic nerve heads" EXACT PLURAL [] xref: TAO:0002213 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000435 ! cranial nerve II -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001626 @@ -19062,8 +19065,8 @@ def: "Portion of organism substance that is a clear fluid that occupies the suba synonym: "CSF" EXACT [] xref: TAO:0002184 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001627 @@ -19073,8 +19076,8 @@ def: "Anatomical cluster that consists of a bulla formed by the exoccipital and synonym: "lagenar capsules" EXACT PLURAL [] xref: TAO:0001620 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001628 @@ -19085,8 +19088,8 @@ synonym: "replacement bones" EXACT PLURAL [] xref: TAO:0001637 is_a: ZFA:0001514 ! bone element is_a: ZFA:0005624 ! replacement element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001629 @@ -19096,8 +19099,8 @@ def: "Replacement bone that forms within the connective tissue surrounding the n synonym: "perichordal bones" EXACT PLURAL [] xref: TAO:0001639 is_a: ZFA:0001628 ! replacement bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001630 @@ -19108,8 +19111,8 @@ synonym: "perichondral bones" EXACT PLURAL [] xref: TAO:0001638 is_a: ZFA:0001693 ! chondral bone relationship: develops_from ZFA:0001634 ! perichondrium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001631 @@ -19119,8 +19122,8 @@ def: "Perichordal bone that surrounds the anterior tip of the notochord." [GOC:m xref: TAO:0001640 is_a: ZFA:0001629 ! perichordal bone relationship: develops_from ZFA:0001633 ! perichordal connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001632 @@ -19130,8 +19133,8 @@ def: "Portion of tissue that consists of mesodermally derived cells and intercel xref: TAO:0001641 xref: VSAO:0000017 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001633 @@ -19140,8 +19143,8 @@ namespace: zebrafish_anatomy def: "Portion of connective tissue which surrounds the notochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001642 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001634 @@ -19151,8 +19154,8 @@ def: "Portion of connective tissue which surrounds cartilage." [GOC:mh, ORCiD:00 synonym: "cartilage connective tissue" EXACT [] xref: TAO:0001643 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001635 @@ -19163,8 +19166,8 @@ synonym: "intramembranous bones" EXACT PLURAL [] xref: TAO:0001644 is_a: ZFA:0001514 ! bone element relationship: develops_from ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001636 @@ -19174,8 +19177,8 @@ def: "Intramembranous bone that forms deep in the organism." [GOC:mh, ORCiD:0000 synonym: "membrane bones" EXACT PLURAL [] xref: TAO:0001645 is_a: ZFA:0001635 ! intramembranous bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001637 @@ -19187,9 +19190,9 @@ synonym: "process" EXACT [TAO:0001834] xref: TAO:0001646 xref: TAO:0001834 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001514 ! bone element -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001638 @@ -19200,9 +19203,9 @@ synonym: "octaval nucleus" EXACT [] synonym: "vestibulocochlear nucleus" EXACT [] xref: TAO:0002243 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001639 @@ -19212,9 +19215,9 @@ def: "Simple squamous epithelium which lines blood and lymphatic vessels and the synonym: "endothelia" EXACT PLURAL [] xref: TAO:0002171 is_a: ZFA:0001498 ! simple squamous epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001640 @@ -19224,9 +19227,9 @@ def: "Ventral bend in the brain occurring caudal to the adenohypophyseal placode synonym: "ventral flexure" EXACT [] xref: TAO:0002181 is_a: ZFA:0005593 ! neuraxis flexure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001641 @@ -19235,9 +19238,9 @@ namespace: zebrafish_anatomy def: "Neural arch on the urostyle. It does not support a neural spine. Sanger and McCune 2002." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001666 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000158 ! urostyle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001642 @@ -19247,8 +19250,8 @@ def: "Anatomical cluster consisting of adjacent teeth constituting a row." [GOC: synonym: "tooth rows" EXACT PLURAL [] xref: TAO:0001667 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001643 @@ -19260,8 +19263,8 @@ synonym: "anatomical spaces" EXACT PLURAL [] xref: CARO:0000005 xref: TAO:0001668 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001644 @@ -19271,8 +19274,8 @@ def: "Cartilage of the lower jaw that give rise to a portion of the anguloarticu synonym: "articular cartilages" EXACT PLURAL [] xref: TAO:0001670 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001645 @@ -19282,8 +19285,8 @@ def: "Dermal bone that is located posterior to the dentary and lateral to the ar synonym: "angular bones" EXACT PLURAL [] xref: TAO:0001669 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001646 @@ -19294,8 +19297,8 @@ synonym: "anal fin pterygiophores" RELATED [] synonym: "anal fin radials" EXACT PLURAL [] xref: TAO:0001671 is_a: ZFA:0000271 ! radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001647 @@ -19306,8 +19309,8 @@ synonym: "dorsal fin pterygiophore " RELATED [] synonym: "dorsal fin radials" EXACT PLURAL [] xref: TAO:0001672 is_a: ZFA:0000271 ! radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001648 @@ -19316,8 +19319,8 @@ namespace: zebrafish_anatomy def: "Neural crest that migrates into the pharyngeal arches and heart, forming connective tissue that separates the vessels of the heart." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0002173 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001649 @@ -19327,8 +19330,8 @@ def: "Anatomical cluster that is the series of dermal bones associated with the synonym: "circumorbital series" EXACT [] xref: TAO:0001709 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001650 @@ -19337,8 +19340,8 @@ namespace: zebrafish_anatomy synonym: "gill mesenchyme" EXACT [] xref: TAO:0002172 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001651 @@ -19353,9 +19356,9 @@ xref: TAO:0000283 xref: TAO:0002200 is_a: ZFA:0000236 ! mandibular muscle is_a: ZFA:0001652 ! head muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005923 ! anterior migratory muscle precursor stream -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001652 @@ -19366,9 +19369,9 @@ synonym: "cephalic muscle" EXACT [] synonym: "cranial muscle " RELATED [] xref: TAO:0002198 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000328 ! cephalic musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001653 @@ -19377,9 +19380,9 @@ namespace: zebrafish_anatomy def: "Muscle which is paired and runs anterio-posteriorly along the heart and is covered with epicardium." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-001026-2] xref: TAO:0002221 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001654 @@ -19388,9 +19391,9 @@ namespace: zebrafish_anatomy def: "Anatomical space which is located beneath the operculum and external to the gills." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002154 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001655 @@ -19400,10 +19403,10 @@ def: "Anatomical space in which the heart is located and is surrounded by the pe synonym: "thoracic cavity" EXACT [] xref: TAO:0002220 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001438 ! coelom relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001656 @@ -19415,10 +19418,10 @@ synonym: "coelomic cavity" RELATED [] synonym: "visceral cavity" EXACT [] xref: TAO:0002224 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001438 ! coelom relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001657 @@ -19428,9 +19431,9 @@ def: "CNS tract/commissure which extends between the telencephalon and diencepha synonym: "SOT" EXACT [] xref: TAO:0002244 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001658 @@ -19439,9 +19442,9 @@ namespace: zebrafish_anatomy def: "Nucleus located within the hindbrain." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002177 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001659 @@ -19451,9 +19454,9 @@ def: "Brain nucleus part of the diencephalon." [GOC:mh, ORCiD:0000-0001-9114-873 xref: TAO:0002191 is_a: ZFA:0001488 ! multi-tissue structure is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001660 @@ -19461,9 +19464,9 @@ name: telencephalic nucleus namespace: zebrafish_anatomy xref: TAO:0002178 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001662 @@ -19472,9 +19475,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located in the caudal tuberculum. The preglomerular nuclei make up most of the migrated nuclei within the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0002226 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001663 @@ -19483,9 +19486,9 @@ namespace: zebrafish_anatomy def: "The portion of tissue that is the initial segment of one of the cranial nerves leaving the central nervous system." [http://en.wikipedia.org/wiki/Nerve_root] xref: TAO:0002190 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000641 ! cranial nerve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001665 @@ -19494,9 +19497,9 @@ namespace: zebrafish_anatomy def: "Nucleus located in the midbrain." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002209 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001666 @@ -19505,9 +19508,9 @@ namespace: zebrafish_anatomy def: "Telencephalic nucleus which is in contact with the median ependymal lining of the ventricle and consists of the dorsal, ventral, supracommissural and postcommissural nuclei of the ventral telencephalon. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0002222 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000304 ! ventral telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001667 @@ -19516,9 +19519,9 @@ namespace: zebrafish_anatomy def: "Telencephalic nucleus which has migrated away from the ependyma and consists of the central, lateral nuclei and the dorsal and ventral entopeduncular nuclei. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0002179 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000304 ! ventral telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001668 @@ -19528,8 +19531,8 @@ def: "Peripheral nucleus of the ventral telencephalon which is located immediate synonym: "area ventralis telencephali, nucleus centralis" EXACT [] xref: TAO:0002180 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001669 @@ -19538,9 +19541,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located between the dorsal hypothalamus and the caudal tuberal nucleus and does not contain tyrosine hydroxylase immunoreactive cells." [ZFIN:ZDB-PUB-001220-2] xref: TAO:0002202 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001670 @@ -19549,10 +19552,10 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the part of the notochord located in the caudal fin." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001821 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000135 ! notochord relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001671 @@ -19561,9 +19564,9 @@ namespace: zebrafish_anatomy def: "Epithelium that is the primary epithelium of the developing inner ear and has anterior and posterior maculae as its parts. These maculae later move apart into distinct regions of epithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-383] xref: TAO:0002206 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001672 @@ -19573,10 +19576,10 @@ def: "Portion of tissue that grows in from the dorsolateral wall of the otic ves synonym: "dorsal bar" RELATED [] xref: TAO:0002193 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000262 ! posterior semicircular canal relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001673 @@ -19586,9 +19589,9 @@ def: "Podocyte that is part of the pronephros." [GOC:cvs, ORCiD:0000-0002-2244-7 subset: cell_slim xref: TAO:0002237 is_a: ZFA:0009285 ! podocyte -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001674 @@ -19598,9 +19601,9 @@ def: "Podocyte that is part of the kidney (mesonephros)." [GOC:cvs, ORCiD:0000-0 subset: cell_slim xref: TAO:0002208 is_a: ZFA:0009285 ! podocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001288 ! renal glomerulus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001675 @@ -19609,8 +19612,8 @@ namespace: zebrafish_anatomy def: "Portion of connective tissue that is a fibrous band connecting bones or cartilages or supporting an organ." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001682 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001676 @@ -19619,9 +19622,9 @@ namespace: zebrafish_anatomy def: "Ligament that is in the eye and is located at the angle between the cornea and the iris." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070629-16] xref: TAO:0002141 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001677 @@ -19630,9 +19633,9 @@ namespace: zebrafish_anatomy def: "Floor plate that is part of the midbrain." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002196 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001678 @@ -19642,8 +19645,8 @@ def: "Multi-tissue structure that consists of the structures that develop into t comment: Dbxref for ZFIN changed to match actual database accession number. Old Dbxref ZDB-ANAT-090226-1 correct Dbxref ZDB-ANAT-090227-5. xref: TAO:0002201 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001679 @@ -19658,9 +19661,9 @@ synonym: "presumptive lens" RELATED [] xref: TAO:0002205 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000122 ! lens placode -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001680 @@ -19669,8 +19672,8 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the preoptic area. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] xref: TAO:0002219 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-03-23T01:16:53Z @@ -19683,9 +19686,9 @@ synonym: "gray mater" RELATED [] synonym: "gray matter" EXACT [] xref: TAO:0002197 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-03-23T01:47:27Z @@ -19702,9 +19705,9 @@ xref: TAO:0000145 xref: TAO:0002142 xref: TAO:0002143 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Melissa Haendel creation_date: 2009-03-23T01:50:38Z @@ -19715,9 +19718,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue comprised of four to six layers of nonkeratinized, stratified squamous cells and represents approximately 60% of the thickness of the cornea." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002187 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:11:11Z @@ -19730,9 +19733,9 @@ synonym: "anterior elastic lamina" EXACT [] synonym: "anterior limiting membrane" RELATED [] xref: TAO:0002155 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Melissa Haendel creation_date: 2009-03-23T02:11:47Z @@ -19743,9 +19746,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is located basal to Bowman's layer and distal to Descemet's membrane and is comprised largely of connective tissue." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002189 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:16Z @@ -19757,9 +19760,9 @@ def: "Acellular anatomical structure composed of collagen, Descemet's membrane i synonym: "posterior limiting membrane" EXACT [] xref: TAO:0002157 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:32Z @@ -19770,9 +19773,9 @@ namespace: zebrafish_anatomy def: "Epithelium that is the innermost layer of the cornea and is comprised of a monolayer of polygonal cells." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002186 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:13:25Z @@ -19783,9 +19786,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002188 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-03-23T04:36:20Z @@ -19797,8 +19800,8 @@ def: "Non-material anatomical entity of one dimension, which forms a boundary of xref: CARO:0000008 xref: TAO:0001837 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell created_by: Melissa Haendel creation_date: 2009-04-30T02:46:34Z @@ -19809,8 +19812,8 @@ namespace: zebrafish_anatomy def: "Anatomical structure that delineates a furrow or depression in an organ or tissue." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001838 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell created_by: Melissa Haendel creation_date: 2009-04-30T02:48:53Z @@ -19823,10 +19826,10 @@ subset: cell_slim xref: CL:0001031 xref: TAO:0002182 is_a: ZFA:0009070 ! granule cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000358 ! granular layer corpus cerebelli relationship: part_of ZFA:0000766 ! granular layer valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-04-30T03:18:48Z @@ -19837,9 +19840,9 @@ namespace: zebrafish_anatomy def: "CNS white matter that crosses the midline within the hindbrain." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-090417-11] xref: TAO:0002199 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-06-18T12:33:21Z @@ -19849,8 +19852,8 @@ name: chondral bone namespace: zebrafish_anatomy def: "Replacement bone that forms within or surrounding a cartilaginous skeletal element." [GOC:mh, ORCiD:0000-0001-9114-8737] is_a: ZFA:0001628 ! replacement bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-07-29T11:34:33Z @@ -19863,9 +19866,9 @@ subset: cell_slim xref: CL:0000626 xref: TAO:0002211 is_a: ZFA:0009070 ! granule cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-04-30T03:21:40Z @@ -19877,8 +19880,8 @@ def: "Motor nucleus of vagal nerve that is located within the dorsolateral porti synonym: "dlX" EXACT [] xref: TAO:0002192 is_a: ZFA:0000387 ! motor nucleus of vagal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-08-04T10:42:49Z @@ -19890,8 +19893,8 @@ def: "Motor nucleus of vagal nerve that is located within the medial portion of synonym: "mmX" EXACT [] xref: TAO:0002207 is_a: ZFA:0000387 ! motor nucleus of vagal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Melissa Haendel creation_date: 2009-08-04T10:45:00Z @@ -19905,9 +19908,9 @@ synonym: "octaval nerve motor nuclei" EXACT PLURAL [] synonym: "OLe" EXACT [] xref: TAO:0002174 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:04:59Z @@ -19922,8 +19925,8 @@ synonym: "rostral cranial nerve VIII motor nucleus" EXACT [] synonym: "rostral efferent nuclei" RELATED PLURAL [ZFIN:ZDB-PUB-061229-17] xref: TAO:0002175 is_a: ZFA:0001697 ! octaval nerve motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:21:34Z @@ -19938,8 +19941,8 @@ synonym: "RELL" EXACT [] synonym: "rostral cranial nerve VIII motor nucleus" EXACT [] xref: TAO:0002176 is_a: ZFA:0001697 ! octaval nerve motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:24:26Z @@ -19950,9 +19953,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the external layer of the swim bladder that is covered by the peritoneum, and made of elastic fibres and ichthyocol (short needles of collagen)." [http://www.briancoad.com/Dictionary/T.htm] xref: TAO:0002245 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-05T12:54:11Z @@ -19963,9 +19966,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the internal layer of the swim bladder and is comprised of thin endoderm and a smooth muscle layer called the muscularis mucosa with longitudinal and circular fibres with some collagen." [http://www.briancoad.com/Dictionary/T.htm] xref: TAO:0002246 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-05T12:55:22Z @@ -19976,8 +19979,8 @@ namespace: zebrafish_anatomy def: "Proliferative region that is part of the developing fin fold or fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002146 is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-08-05T02:38:05Z @@ -19988,9 +19991,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is a thickening and reshaping of the epidermal basal stratum cells beneath which fibroblasts accumulate to form the scale primordium." [ZFIN:ZDB-PUB-081008-12] xref: TAO:0002195 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001180 ! epidermal basal stratum -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:22:18Z @@ -20003,9 +20006,9 @@ synonym: "scale placode" RELATED [] synonym: "scale primordia " EXACT PLURAL [] xref: TAO:0002242 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:35:05Z @@ -20016,9 +20019,9 @@ namespace: zebrafish_anatomy def: "Duct that is part of the inner ear and connects to the semicircular canals ending in the endolymphatic sac." [http://en.wikipedia.org/wiki/Endolymphatic_duct, ZFIN:ZDB-PUB-090112-20] xref: TAO:0002194 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-11T09:15:55Z @@ -20029,9 +20032,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the corpus cerebelli and contains Purkinje cells." [ZFIN:ZDB-PUB-090422-9] xref: TAO:0002240 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-11T09:41:06Z @@ -20042,9 +20045,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that has as its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain." [ISBN:3764351209] xref: TAO:0002156 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T01:39:24Z @@ -20056,9 +20059,9 @@ def: "CNS white matter that is part of the cerebellum." [GOC:mh, ORCiD:0000-0001 synonym: "cerebellar tracts/commissures" EXACT PLURAL [] xref: TAO:0002183 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T01:48:48Z @@ -20069,9 +20072,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the valvula cerebelli and contains Purkinje cells." [ZFIN:ZDB-PUB-090422-9] xref: TAO:0002241 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:00:08Z @@ -20083,10 +20086,10 @@ def: "Portion of tissue that consists of afferent axons from the spinal cord, se synonym: "mossy fibers" EXACT PLURAL [] xref: TAO:0002210 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:02:35Z @@ -20098,10 +20101,10 @@ def: "Portion of tissue that consists of afferent axons from the inferior olive synonym: "climbing fibers" EXACT PLURAL [] xref: TAO:0002185 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:18:48Z @@ -20113,9 +20116,9 @@ def: "Portion of tissue that is part of the heart tube and will become the bulbu xref: TAO:0002230 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000818 ! vagal neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:25:06Z @@ -20127,10 +20130,10 @@ def: "Portion of tissue that consists of axons of cerebellar granule cells that synonym: "parallel fibers" EXACT PLURAL [] xref: TAO:0002218 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000394 ! molecular layer corpus cerebelli relationship: part_of ZFA:0000913 ! molecular layer valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T04:32:51Z @@ -20141,8 +20144,8 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become ventral mesoderm. Determined by fate mapping." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002235 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere created_by: Melissa Haendel creation_date: 2009-08-24T11:02:45Z @@ -20153,9 +20156,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue within the otic vesicle that consists of a thin layer of otic epithelium covering a finger-shaped core of acellular matrix." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-090330-11] xref: TAO:0002215 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000051 ! otic vesicle -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Melissa Haendel creation_date: 2009-08-25T10:45:23Z @@ -20166,8 +20169,8 @@ namespace: zebrafish_anatomy def: "Otic vesicle protrusion that is initially ventrally located and then fuses with the lateral protrusion, giving rise to the pillar of the lateral semicircular canal." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-090330-11] xref: TAO:0002216 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000035 ! Larval:Protruding-mouth -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000035 ! larval:protruding-mouth +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-08-25T10:53:24Z @@ -20178,9 +20181,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue around which the semicircular canals flow." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-383] xref: TAO:0002223 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000431 ! semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Melissa Haendel creation_date: 2009-08-25T10:57:52Z @@ -20192,9 +20195,9 @@ def: "Multi-tissue structure that is part of the heart tube and will become the xref: TAO:0002228 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001721 ! presumptive atrium primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:20:59Z @@ -20207,9 +20210,9 @@ xref: TAO:0002231 xref: ZFA:0002231 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001720 ! presumptive cardiac ventricle primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:21:18Z @@ -20220,9 +20223,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac ventricle." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002232 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:23Z @@ -20233,9 +20236,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac atrium." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002229 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:28Z @@ -20246,9 +20249,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the sinus venosus." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002234 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:40:57Z @@ -20259,9 +20262,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the atrioventricular canal." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002227 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Melissa Haendel creation_date: 2009-08-31T11:57:36Z @@ -20272,9 +20275,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the endocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002233 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T01:21:44Z @@ -20288,9 +20291,9 @@ subset: cell_slim xref: CL:0002377 xref: TAO:0002203 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Melissa Haendel creation_date: 2009-09-08T02:10:35Z @@ -20302,9 +20305,9 @@ def: "Artery that extends horizontally across the brain midline which is fed by synonym: "BCA" EXACT [] xref: TAO:0005000 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005001 @@ -20317,8 +20320,8 @@ synonym: "PCS" EXACT [] synonym: "posterior communicating segment of the basilar artery" EXACT [] xref: TAO:0005001 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005002 @@ -20328,9 +20331,9 @@ def: "Artery that runs along the ventral keel of the hindbrain. It lies between synonym: "BA" EXACT [] xref: TAO:0005002 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005003 @@ -20341,10 +20344,10 @@ synonym: "branchial basket" RELATED [] synonym: "branchial vasculature" EXACT [] xref: TAO:0005003 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature relationship: part_of ZFA:0001306 ! pharyngeal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005004 @@ -20355,9 +20358,9 @@ synonym: "aortic arches" EXACT PLURAL [] synonym: "branchial aortic arches " EXACT PLURAL [ZFIN:ZDB-PUB-080512-6] xref: TAO:0005004 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005005 @@ -20368,9 +20371,9 @@ synonym: "AA1" EXACT [] synonym: "mandibular aortic arch" EXACT [] xref: TAO:0005005 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001612 ! pharyngeal arch 1 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005006 @@ -20381,9 +20384,9 @@ synonym: "AA2" EXACT [] synonym: "hyoid aortic arch" EXACT [] xref: TAO:0005006 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001611 ! pharyngeal arch 2 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005007 @@ -20393,9 +20396,9 @@ def: "Aortic arch that is part of pharyngeal arch 3. The paired aortic arch 3 ar synonym: "AA3" EXACT [] xref: TAO:0005007 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001606 ! pharyngeal arch 3 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005008 @@ -20405,9 +20408,9 @@ def: "Aortic arch that is part of pharyngeal arch 4. The paired aortic arch 4 ar synonym: "AA4" EXACT [] xref: TAO:0005008 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001607 ! pharyngeal arch 4 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005009 @@ -20417,9 +20420,9 @@ def: "Aortic arch that is part of pharyngeal arch 5. Aortic arch 5 artery is pai synonym: "AA5" EXACT [] xref: TAO:0005009 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001608 ! pharyngeal arch 5 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005010 @@ -20432,9 +20435,9 @@ synonym: "mid-cerebral vein" EXACT [] synonym: "middle cerebral vein" EXACT [] xref: TAO:0005010 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005011 @@ -20445,8 +20448,8 @@ synonym: "pseudobranchial arteries" EXACT PLURAL [] xref: TAO:0005011 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005012 @@ -20457,10 +20460,10 @@ synonym: "AFA" EXACT [] synonym: "afferent filamental arteries" EXACT PLURAL [] xref: TAO:0005012 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000666 ! filamental artery relationship: part_of ZFA:0000716 ! afferent branchial artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005013 @@ -20470,9 +20473,9 @@ def: "The branch of the afferent branchial artery that continues posterodorsally synonym: "CCB" EXACT [] xref: TAO:0005013 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000716 ! afferent branchial artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005014 @@ -20483,9 +20486,9 @@ synonym: "RCB" EXACT [] synonym: "recurrent branch afferent branchial arteries" EXACT PLURAL [] xref: TAO:0005014 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000716 ! afferent branchial artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005015 @@ -20496,10 +20499,10 @@ synonym: "afferent lamellar arterioles" EXACT PLURAL [] synonym: "AFL" EXACT [] xref: TAO:0005015 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000211 ! gill lamella relationship: part_of ZFA:0005012 ! afferent filamental artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005016 @@ -20509,9 +20512,9 @@ def: "Aortic arch that is part of pharyngeal arch 6. Aortic arch 6 artery is pai synonym: "AA6" EXACT [] xref: TAO:0005016 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001609 ! pharyngeal arch 6 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005017 @@ -20521,9 +20524,9 @@ def: "The vessel between the anterior cerebral vein and the mid cerebral vein." synonym: "PMBC" EXACT [] xref: TAO:0005017 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005018 @@ -20533,10 +20536,10 @@ def: "Artery that exits the gill filament." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "EFA" EXACT [] xref: TAO:0005018 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000202 ! efferent branchial artery relationship: part_of ZFA:0000666 ! filamental artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005019 @@ -20547,10 +20550,10 @@ synonym: "efferent lamellar arterioles" EXACT PLURAL [] synonym: "ELA" EXACT [] xref: TAO:0005019 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000211 ! gill lamella relationship: part_of ZFA:0005018 ! efferent filamental artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005020 @@ -20560,9 +20563,9 @@ def: "Artery that irrigates the forebrain and midbrain." [ZFIN:ZDB-PUB-010205-5] synonym: "CtA" EXACT [] xref: TAO:0005020 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005021 @@ -20572,8 +20575,8 @@ def: "Extend upward from the PCS, branch to provide an arterial feed to the hind synonym: "CCtA" EXACT [] xref: TAO:0005021 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005022 @@ -20585,8 +20588,8 @@ synonym: "ORA" EXACT [] xref: TAO:0005022 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005023 @@ -20595,8 +20598,8 @@ namespace: zebrafish_anatomy def: "System responsible for generating hematopoietic cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005023 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005024 @@ -20605,9 +20608,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around trunk." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005024 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005025 @@ -20619,11 +20622,11 @@ synonym: "DLAV" EXACT [] xref: TAO:0005025 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0001285 ! intersegmental vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001073 ! axial vasculature relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005026 @@ -20634,9 +20637,9 @@ synonym: "lateral head vein" EXACT [] synonym: "PHS" EXACT [] xref: TAO:0005026 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005027 @@ -20647,9 +20650,9 @@ synonym: "caudal cerebral vein" EXACT [] synonym: "PCeV" EXACT [] xref: TAO:0005027 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005028 @@ -20664,10 +20667,10 @@ synonym: "dorsal aorta - posterior cardinal vein joint" EXACT [ZFIN:ZDB-PUB-0612 synonym: "DP joint" EXACT [] xref: TAO:0005028 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000014 ! dorsal aorta relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0005029 @@ -20679,9 +20682,9 @@ synonym: "RBI" EXACT [] xref: TAO:0005029 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005041 ! anterior lateral plate mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0005030 @@ -20692,9 +20695,9 @@ synonym: "DCV" EXACT [] xref: TAO:0005030 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005031 @@ -20704,9 +20707,9 @@ def: "Vessel that connects to the primitive hindbrain channel and the basilar ar synonym: "DLV" EXACT [] xref: TAO:0005031 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005032 @@ -20716,8 +20719,8 @@ def: "Vein that connects to the hyaloid vein that drains the eye. External to e synonym: "OV" EXACT [] xref: TAO:0005032 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005033 @@ -20727,8 +20730,8 @@ def: "Is an pair of arteries that form from the intersegmental vessels at the le synonym: "vertebral arteries" EXACT PLURAL [] xref: TAO:0005033 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005034 @@ -20740,10 +20743,10 @@ xref: TAO:0005034 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0000477 ! posterior cardinal vein relationship: develops_from ZFA:0001057 ! intersegmental vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005035 @@ -20754,9 +20757,9 @@ synonym: "SIV" EXACT [] synonym: "vitelline vein" EXACT [] xref: TAO:0005035 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005036 @@ -20766,8 +20769,8 @@ def: "A continuation of the anterior mesenteric artery, which branches out from synonym: "SIA" EXACT [] xref: TAO:0005036 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005037 @@ -20777,9 +20780,9 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th synonym: "tail vasculature" RELATED [] xref: TAO:0005037 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005038 @@ -20789,9 +20792,9 @@ synonym: "" RELATED [] synonym: "supraintestinal veins" EXACT PLURAL [] xref: TAO:0005038 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005039 @@ -20800,9 +20803,9 @@ namespace: zebrafish_anatomy synonym: "ALM" EXACT [] xref: TAO:0005039 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001065 ! lateral mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005040 @@ -20811,9 +20814,9 @@ namespace: zebrafish_anatomy synonym: "PLM" EXACT [] xref: TAO:0005040 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001065 ! lateral mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005041 @@ -20822,9 +20825,9 @@ namespace: zebrafish_anatomy synonym: "ALPM" EXACT [] xref: TAO:0005041 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000121 ! lateral plate mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005042 @@ -20833,9 +20836,9 @@ namespace: zebrafish_anatomy synonym: "PLPM" EXACT [] xref: TAO:0005042 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000121 ! lateral plate mesoderm -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0005043 @@ -20846,9 +20849,9 @@ synonym: "f-nevi" EXACT [] synonym: "naevus" EXACT [] xref: TAO:0005043 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005044 @@ -20859,8 +20862,8 @@ synonym: "optic arteries" EXACT PLURAL [] xref: TAO:0005044 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005045 @@ -20870,9 +20873,9 @@ def: "Artery that is internal to the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917, synonym: "hyaloid arteries" EXACT PLURAL [] xref: TAO:0005045 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005046 ! hyaloid vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005046 @@ -20883,8 +20886,8 @@ synonym: "hyaloid vasculature" RELATED [] synonym: "hyaloid vessels" EXACT PLURAL [] xref: TAO:0005046 is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005047 @@ -20894,9 +20897,9 @@ def: "Vein internal to the eye." [ZFIN:ZDB-PUB-010205-5] synonym: "hyaloid veins" EXACT PLURAL [] xref: TAO:0005047 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005046 ! hyaloid vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005048 @@ -20906,8 +20909,8 @@ def: "Vessel that branches from cranial division of the internal carotid artery, synonym: "PPrA" EXACT [] xref: TAO:0005048 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005049 @@ -20918,8 +20921,8 @@ synonym: "PrA" EXACT [] xref: TAO:0005049 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005048 ! primitive prosencephalic artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005050 @@ -20929,8 +20932,8 @@ def: "The PLA branches ventrally from the CrDI. It extends rostrally along the synonym: "PLA" EXACT [] xref: TAO:0005050 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005051 @@ -20941,8 +20944,8 @@ synonym: "CMV" EXACT [] synonym: "communicating vessels" EXACT [] xref: TAO:0005051 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005052 @@ -20953,8 +20956,8 @@ synonym: "AMCtA" EXACT [] synonym: "rostral mesencephalic central artery" EXACT [] xref: TAO:0005052 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005053 @@ -20964,8 +20967,8 @@ def: "Artery that branches off the cranial division of the internal carotid arte synonym: "NCA" EXACT [] xref: TAO:0005053 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005054 @@ -20978,8 +20981,8 @@ is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery relationship: develops_from ZFA:0005083 ! ventral branch nasal ciliary artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005055 @@ -20989,9 +20992,9 @@ def: "Drains the PLA loop proceeds straight caudally along the cranial midline j synonym: "MPLV" EXACT [] xref: TAO:0005055 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005056 @@ -21001,9 +21004,9 @@ def: "Vein that drains the median palatocerebral vein into the optic vein." [GOC synonym: "PLV" EXACT [] xref: TAO:0005056 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005057 @@ -21014,9 +21017,9 @@ comment: No evidence of epicardium layer in cardiac atrium in Hu et al 2001. xref: TAO:0005057 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005808 ! proepicardial cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005058 @@ -21025,10 +21028,10 @@ namespace: zebrafish_anatomy def: "The external layer of the ventricle bounding the ventricular myocardium. It is formed by a single layer of mesothelial cells supported by a basal lamina, and imbricated with collagen, fibroblasts, and vascular structures in the subepicardial space." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] xref: TAO:0005058 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0005057 ! epicardium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005059 @@ -21039,9 +21042,9 @@ comment: Cardiac conduction may occur in the trabecular layer via trabecular fib synonym: "trabecula" RELATED [] xref: TAO:0005059 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005060 @@ -21049,10 +21052,10 @@ name: trabecular layer of ventricle namespace: zebrafish_anatomy xref: TAO:0005060 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005059 ! trabecular layer relationship: part_of ZFA:0005061 ! ventricular myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005061 @@ -21061,10 +21064,10 @@ namespace: zebrafish_anatomy def: "Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] xref: TAO:0005061 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005062 @@ -21073,9 +21076,9 @@ namespace: zebrafish_anatomy def: "The outer layer the ventricular myocardium, muscle fibers are arranged in a compact form and involved the entire ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005062 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005061 ! ventricular myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005063 @@ -21086,9 +21089,9 @@ synonym: "cardiac pacemaker" EXACT [] synonym: "central conduction system" EXACT [] xref: TAO:0005063 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005064 @@ -21098,10 +21101,10 @@ def: "The atrioventricular valve has four distinct leaflets oriented anterior, p xref: TAO:0005064 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005065 @@ -21111,9 +21114,9 @@ def: "Multi-tissue structure composed of leaflets that separate parts of the hea synonym: "heart valves" EXACT PLURAL [] xref: TAO:0005065 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005066 @@ -21123,9 +21126,9 @@ def: "The portion of tissue that is the outer layer of the bulbus arteriosus. It synonym: "bulbus arteriosus externa" EXACT [] xref: TAO:0005066 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005067 @@ -21135,9 +21138,9 @@ def: "Composed of 7-10 layers of helically arranged smooth muscle cells surround synonym: "bulbus arteriosus media" EXACT [] xref: TAO:0005067 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005068 @@ -21147,9 +21150,9 @@ def: "Composed of subendothelium with longitudinally oriented collagen, reticula synonym: "bulbus arteriosus intima" EXACT [] xref: TAO:0005068 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005069 @@ -21159,10 +21162,10 @@ def: "Portion of tissue containing 3 and 30 cells in dorsal right quadrant of xref: TAO:0005069 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005601 ! sinoatrial ring -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005070 @@ -21174,10 +21177,10 @@ synonym: "downstream pacemaker" RELATED [] xref: TAO:0005070 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005073 ! atrioventricular ring -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005071 @@ -21198,10 +21201,10 @@ namespace: zebrafish_anatomy def: "A portion of endocardial tissue that is part of the atrioventricular ring." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005072 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001320 ! endocardium relationship: part_of ZFA:0005073 ! atrioventricular ring -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005073 @@ -21211,10 +21214,10 @@ def: "A ring of conduction tissue that forms in the atrioventricular canal." [ZF synonym: "AV ring" EXACT [] xref: TAO:0005073 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005074 @@ -21223,8 +21226,8 @@ namespace: zebrafish_anatomy def: "Cardiac conduction system, characterized by slow impulse propagation and prolonged refractory periods." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060227-6] xref: TAO:0005074 is_a: ZFA:0005063 ! cardiac conduction system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005075 @@ -21235,9 +21238,9 @@ synonym: "distal conduction system " RELATED [] synonym: "ventricular fast conduction system" EXACT [ZFIN:ZDB-PUB-120927-27] xref: TAO:0005075 is_a: ZFA:0005063 ! cardiac conduction system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005076 @@ -21246,9 +21249,9 @@ namespace: zebrafish_anatomy def: "Is a portion of tissue that will develop into vasculature." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005076 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0005077 @@ -21257,8 +21260,8 @@ namespace: zebrafish_anatomy def: "The primordial vasculature that will develop into blood vessels by the process of tubulogenesis. The vascular cord is composed of angioblast or vascular endothelial cells in a solid linear mass called a cord. The cord then undergoes tubulogenesis to form the lumen of the vessels." [ZFIN:ZDB-PUB-040416-1] xref: TAO:0005077 is_a: ZFA:0005076 ! primordial vasculature -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0005078 @@ -21268,8 +21271,8 @@ def: "Projects rostrally and dorsally from the AMCtA to irrigate the midportion synonym: "MMCtA" EXACT [] xref: TAO:0005078 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005079 @@ -21280,8 +21283,8 @@ synonym: "caudal mesencephalic central artery" EXACT [] synonym: "PMCtA" EXACT [] xref: TAO:0005079 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005080 @@ -21292,8 +21295,8 @@ synonym: "AMA" EXACT [] synonym: "rostral mesenteric artery" EXACT [] xref: TAO:0005080 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005081 @@ -21306,9 +21309,9 @@ synonym: "ICA" EXACT [] xref: TAO:0005081 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001053 ! primitive internal carotid artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000097 ! carotid artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005082 @@ -21319,9 +21322,9 @@ synonym: "dorsal branch nasal ciliary arteries" EXACT PLURAL [] xref: TAO:0005082 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005083 @@ -21330,9 +21333,9 @@ namespace: zebrafish_anatomy xref: TAO:0005083 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005084 @@ -21342,8 +21345,8 @@ def: "These arteries branch dorsally from both sides of the posterior communicat synonym: "metencephalic arteries" EXACT PLURAL [] xref: TAO:0005084 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005085 @@ -21353,8 +21356,8 @@ def: "The nasal arteries start at the internal carotid artery and travel rostral synonym: "NA" EXACT [] xref: TAO:0005085 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005086 @@ -21365,9 +21368,9 @@ synonym: "PA" EXACT [] synonym: "subclavian artery" EXACT [] xref: TAO:0005086 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005301 ! pectoral fin blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005087 @@ -21377,9 +21380,9 @@ def: "Vein from the pectoral fin that drains into the ACV just cranial to the AC synonym: "PV" EXACT [] xref: TAO:0005087 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005301 ! pectoral fin blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005088 @@ -21390,8 +21393,8 @@ synonym: "caudal mesenteric artery" EXACT [] synonym: "PMA" EXACT [] xref: TAO:0005088 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005089 @@ -21401,8 +21404,8 @@ def: "An elaborate set of vessels that branch off caudally from the anterior mes synonym: "SBA" EXACT [] xref: TAO:0005089 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005090 @@ -21414,9 +21417,9 @@ synonym: "primary hepatic portal vein" RELATED [] xref: TAO:0005090 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005035 ! subintestinal vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005091 @@ -21427,10 +21430,10 @@ synonym: "hepatic sinusoids" EXACT PLURAL [] xref: TAO:0005091 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0005035 ! subintestinal vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005092 @@ -21440,8 +21443,8 @@ def: "Paired veins that sprout from the dorsal midline junction and dive ventral synonym: "MsV" EXACT [] xref: TAO:0005092 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005093 @@ -21451,9 +21454,9 @@ def: "Vein that is fed by the nasal artery. It rises dorsally around the fron synonym: "NV" EXACT [] xref: TAO:0005093 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005094 @@ -21466,9 +21469,9 @@ synonym: "CVP" EXACT [] xref: TAO:0005094 is_a: ZFA:0005933 ! mature plexus is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005095 @@ -21477,9 +21480,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005095 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000108 ! fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005096 @@ -21488,9 +21491,9 @@ namespace: zebrafish_anatomy def: "Vasculature of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005096 is_a: ZFA:0005095 ! fin vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005097 @@ -21499,9 +21502,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005097 is_a: ZFA:0005095 ! fin vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005098 @@ -21511,9 +21514,9 @@ def: "Artery that is positioned in the intraray mesenchyme between the hemirays synonym: "central ray arteries" EXACT PLURAL [] xref: TAO:0005098 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005299 ! fin blood vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005099 @@ -21523,9 +21526,9 @@ def: "Vein that flanks and is just lateral to the fin ray, in the interray mesen synonym: "ray veins" EXACT PLURAL [] xref: TAO:0005099 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005299 ! fin blood vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005100 @@ -21535,8 +21538,8 @@ def: "Vessels that travel between artery and veins or vein and vein in a single synonym: "intervessel comisures" EXACT PLURAL [] xref: TAO:0005100 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005101 @@ -21546,8 +21549,8 @@ def: "Vessels that travel between veins in adjacent rays." [GOC:cvs, ORCiD:0000- synonym: "interray vessels" EXACT PLURAL [] xref: TAO:0005101 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005102 @@ -21556,8 +21559,8 @@ namespace: zebrafish_anatomy def: "Stripe of tissue fated to become the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005102 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005103 @@ -21566,8 +21569,8 @@ namespace: zebrafish_anatomy def: "Stripe of tissue on the ventral side of the fish, fated to become the ventral region of the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005103 is_a: ZFA:0005102 ! presumptive median fin fold -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005104 @@ -21576,8 +21579,8 @@ namespace: zebrafish_anatomy def: "Stripe of tissue on the dorsal side of the fish, fated to become the dorsal region of the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005104 is_a: ZFA:0005102 ! presumptive median fin fold -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005105 @@ -21588,9 +21591,9 @@ synonym: "lymph vessel" RELATED [] synonym: "lymph vessels" EXACT PLURAL [] xref: TAO:0005105 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000385 ! lymphatic system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005106 @@ -21599,8 +21602,8 @@ namespace: zebrafish_anatomy synonym: "LLL" EXACT [] xref: TAO:0005106 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005107 @@ -21609,8 +21612,8 @@ namespace: zebrafish_anatomy synonym: "PL" EXACT [] xref: TAO:0005107 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005108 @@ -21620,9 +21623,9 @@ comment: Probably a deep lymph vessel. This vessel was shown in ZDB-PUB-060616- synonym: "FL" EXACT [] xref: TAO:0005108 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005109 @@ -21633,9 +21636,9 @@ synonym: "JL" EXACT [] synonym: "JLV" EXACT [] xref: TAO:0005109 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005110 @@ -21645,8 +21648,8 @@ def: "The thoracic duct is the first perfused lymphatic, located between the dor xref: TAO:0005110 is_a: ZFA:0005296 ! axial lymph vessel relationship: develops_from ZFA:0005605 ! lymphangioblast cord -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005111 @@ -21656,20 +21659,20 @@ def: "Tract that originates in the telencephalon lies medial to the lateral fore synonym: "medial forebrain bundles" EXACT PLURAL [] xref: TAO:0005111 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005112 name: dorsal lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880] +def: "One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-070907-34] synonym: "dorsal lateral lines" EXACT PLURAL [] xref: TAO:0005112 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005113 @@ -21679,9 +21682,9 @@ def: "Neuromast that is part of the dorsal lateral line. (Also see Anatomical At synonym: "neuromast dorsal" EXACT [] xref: TAO:0005113 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005112 ! dorsal lateral line -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005114 @@ -21690,8 +21693,8 @@ namespace: zebrafish_anatomy def: "The middle lateral line system develops from cranial ectodermal placodes, that give rise to both the neuromasts and the middle lateral line sensory nerves that innervate the neuromasts. The middle lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the body that are innervated by several lateral line nerves, which project to the hindbrain. The middle lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005114 is_a: ZFA:0000034 ! lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005115 @@ -21703,8 +21706,8 @@ synonym: "primI" EXACT [] xref: TAO:0005115 is_a: ZFA:0001157 ! posterior lateral line primordium relationship: develops_from ZFA:0001156 ! posterior lateral line placode -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005116 @@ -21714,8 +21717,8 @@ def: "Second lateral line primordium. These primordia move at 0.2 somites/hour synonym: "secondary posterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005116 is_a: ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005117 @@ -21725,9 +21728,9 @@ def: "A migrating group of cells originating from an anterior lateral line placo synonym: "anterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005117 is_a: ZFA:0000228 ! lateral line primordium -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005118 @@ -21737,9 +21740,9 @@ def: "A migrating group of cells originating from the middle lateral line placod synonym: "middle lateral line primordia" EXACT PLURAL [] xref: TAO:0005118 is_a: ZFA:0000228 ! lateral line primordium -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005119 @@ -21749,8 +21752,8 @@ def: "A surface structure that will eventually grow to form a barbel. The prim synonym: "barbel primordia" EXACT PLURAL [] xref: TAO:0005119 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0005120 @@ -21759,8 +21762,8 @@ namespace: zebrafish_anatomy def: "The serous membrane that lines the peritoneal cavity. The peritoneum secretes serous fluid which allows free movement of the peritoneum and the intraperitoneal organs." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005120 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005121 @@ -21770,9 +21773,9 @@ def: "Dorsolateral placode that gives rise to the middle lateral line." [GOC:cvs synonym: "middle lateral line placodes" EXACT PLURAL [] xref: TAO:0005121 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005122 @@ -21781,9 +21784,9 @@ namespace: zebrafish_anatomy def: "Dorsal region of the axial hypoblast." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001378 ! axial hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0005123 @@ -21792,9 +21795,9 @@ namespace: zebrafish_anatomy def: "Epithelium lining the lumen of the gut." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005123 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005124 @@ -21805,10 +21808,10 @@ synonym: "intestine epithelium" EXACT [] synonym: "villous epithelium" EXACT [ZFIN:ZDB-PUB-090217-11] xref: TAO:0005124 is_a: ZFA:0001496 ! simple columnar epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005123 ! gut epithelium relationship: part_of ZFA:0005660 ! intestinal mucosa -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005125 @@ -21818,9 +21821,9 @@ def: "The entire digestive tract is lined by well developed villi, which are lon synonym: "intestinal villi" EXACT PLURAL [] xref: TAO:0005125 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0005126 @@ -21829,9 +21832,9 @@ namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the intestinal bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005126 is_a: ZFA:0005124 ! intestinal epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001076 ! intestinal bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005127 @@ -21840,9 +21843,9 @@ namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the mid intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005127 is_a: ZFA:0005124 ! intestinal epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001323 ! mid intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005128 @@ -21851,9 +21854,9 @@ namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the posterior intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005128 is_a: ZFA:0005124 ! intestinal epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000706 ! posterior intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005129 @@ -21862,9 +21865,9 @@ namespace: zebrafish_anatomy def: "A double layer composed of peritoneum that attaches the visceral organs to the body wall." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005129 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005120 ! peritoneum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005130 @@ -21873,8 +21876,8 @@ namespace: zebrafish_anatomy def: "The mesentery that originates from the dorsal side of the peritoneal cavity." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005130 is_a: ZFA:0005129 ! mesentery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005131 @@ -21883,22 +21886,22 @@ namespace: zebrafish_anatomy def: "The peritoneum that lines the walls of the peritoneal cavity." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005131 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005120 ! peritoneum relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005132 name: visceral peritoneum namespace: zebrafish_anatomy def: "The part of peritoneum that is a serous membrane covers the external surfaces of most abdominal organs." [GOC:cvs, ORCiD:0000-0002-2244-7917] -synonym: "tunica serosa" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] +synonym: "tunica serosa" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0005132 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005120 ! peritoneum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005133 @@ -21907,8 +21910,8 @@ namespace: zebrafish_anatomy def: "The mesentery that originates from the ventral side of the peritoneal cavity." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005133 is_a: ZFA:0005129 ! mesentery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005134 @@ -21919,8 +21922,8 @@ synonym: "dental epithelia" EXACT PLURAL [] xref: TAO:0005134 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0001174 ! pharyngeal epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005135 @@ -21931,8 +21934,8 @@ synonym: "pharyngeal tooth epithelium" EXACT [] synonym: "tooth epithelium" EXACT [] xref: TAO:0005135 is_a: ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005136 @@ -21943,9 +21946,9 @@ synonym: "ide" EXACT [] synonym: "inner enamel epithelium" EXACT [] xref: TAO:0005136 is_a: ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005137 @@ -21955,9 +21958,9 @@ def: "Outer layer of the dental organ." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "ode" EXACT [] xref: TAO:0005137 is_a: ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005138 @@ -21968,8 +21971,8 @@ synonym: "enamel organ" EXACT [] xref: TAO:0005138 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001153 ! tooth placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005139 @@ -21978,9 +21981,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme enclosed by dental organ." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005139 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005140 @@ -21992,8 +21995,8 @@ synonym: "tooth mesenchyme" EXACT [] xref: TAO:0005140 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005139 ! dental mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005141 @@ -22003,9 +22006,9 @@ def: "Material in the center of the dentine of the mature tooth. In secondary t xref: TAO:0005141 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005140 ! dental papilla -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005142 @@ -22015,9 +22018,9 @@ def: "A dentine-like hypermineralized substance that covers the zebrafish tooth synonym: "enamel" RELATED [] xref: TAO:0005142 is_a: ZFA:0005623 ! odontoid tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005143 @@ -22027,9 +22030,9 @@ def: "Mineralized collagen containing substance that forms the tooth structure. synonym: "dentin " EXACT [] xref: TAO:0005143 is_a: ZFA:0005623 ! odontoid tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005144 @@ -22039,9 +22042,9 @@ def: "Nerve that is a branch of cranial nerve VIII and innervates the cristae am synonym: "ampullary nerves" EXACT PLURAL [] xref: TAO:0005144 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000247 ! cranial nerve VIII -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005145 @@ -22051,9 +22054,9 @@ def: "Portion of tissue composed of contractile fibers." [GOC:cvs, ORCiD:0000-00 synonym: "muscles" EXACT PLURAL [] xref: TAO:0005145 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000548 ! musculature system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005146 @@ -22062,9 +22065,9 @@ namespace: zebrafish_anatomy def: "An area of medulla oblongata, outside the blood-brain barrier. The apical terminals of the neurons are, in a strategic location either to monitor the chemical constitution of the plasma or to release neurogenic substances into the general circulation." [ZFIN:ZDB-PUB-970602-2] xref: TAO:0005146 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005147 @@ -22074,8 +22077,8 @@ def: "A portion of tissue that is regrowing after damage or amputation." [GOC:cv synonym: "regenerating tissues" EXACT PLURAL [] xref: TAO:0005147 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005148 @@ -22085,9 +22088,9 @@ def: "Part of the regeneration epithelium closest to the fin." [GOC:cvs, ORCiD:0 synonym: "apical epidermal caps" EXACT PLURAL [] xref: TAO:0005148 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001389 ! regeneration epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005149 @@ -22097,9 +22100,9 @@ def: "Part of regeneration epithelium at the tip of the fin." [GOC:cvs, ORCiD:00 synonym: "distal epidermal caps" EXACT PLURAL [] xref: TAO:0005149 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001389 ! regeneration epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005150 @@ -22109,9 +22112,9 @@ def: "Layer of the wound epidermis that surrounds the blastema." [GOC:cvs, ORCiD synonym: "basal wound epidermis" EXACT [] xref: TAO:0005150 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001389 ! regeneration epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005151 @@ -22121,8 +22124,8 @@ def: "Iridescent iridophore containing gold reflecting platelets." [GOC:cvs, ORC subset: cell_slim xref: TAO:0005151 is_a: ZFA:0009199 ! iridophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2009-03-12T12:34:16Z @@ -22134,8 +22137,8 @@ def: "Iridescent iridophore containing silver reflecting platelets." [GOC:cvs, O subset: cell_slim xref: TAO:0005152 is_a: ZFA:0009199 ! iridophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2009-03-12T12:48:18Z @@ -22148,8 +22151,8 @@ synonym: "diarthrodial joints" RELATED [] synonym: "diarthroses" EXACT [] xref: TAO:0005153 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:31:49Z @@ -22160,9 +22163,9 @@ namespace: zebrafish_anatomy def: "Portion of organism substance that is a clear fluid that occupies the space in synovial joints." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005154 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005153 ! synovial joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:42:07Z @@ -22174,8 +22177,8 @@ def: "Is a joint where the ends of two bones are connected by cartilage." [GOC:c synonym: "synchondrosis" EXACT [] xref: TAO:0005155 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:52:52Z @@ -22188,8 +22191,8 @@ synonym: "syndesmoses" EXACT PLURAL [] synonym: "syndesmosis" EXACT [] xref: TAO:0005156 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:54:12Z @@ -22201,9 +22204,9 @@ def: "Tela chorioidea that lines the tectal ventricle." [GOC:cvs, ORCiD:0000-000 synonym: "tela choroidea tectal ventricle" EXACT [] xref: TAO:0005157 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000159 ! tectal ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T01:30:05Z @@ -22215,9 +22218,9 @@ def: "Tela chorioidea that lines the fourth ventricle." [GOC:cvs, ORCiD:0000-000 synonym: "tela choroidea fourth ventricle" EXACT [] xref: TAO:0005158 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000110 ! fourth ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T01:40:34Z @@ -22229,9 +22232,9 @@ def: "Tela chorioidea that lines the third ventricle." [GOC:cvs, ORCiD:0000-0002 synonym: "tela choroidea third ventricle" EXACT [] xref: TAO:0005159 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T02:04:56Z @@ -22243,9 +22246,9 @@ def: "Tela chorioidea that lines the telencephalic ventricle." [GOC:cvs, ORCiD:0 synonym: "tela choroidea telencephalic ventricle" EXACT [] xref: TAO:0005160 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000696 ! telencephalic ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T02:20:33Z @@ -22256,9 +22259,9 @@ namespace: zebrafish_anatomy def: "Artery that supplies blood to the liver." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005161 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-04-20T03:43:46Z @@ -22269,9 +22272,9 @@ namespace: zebrafish_anatomy def: "Ducts that transport enzymes between organs in the digestive system." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005162 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Ceri creation_date: 2009-04-20T04:51:36Z @@ -22283,9 +22286,9 @@ def: "Intercellular space surrounded by the basal surface of the hepatocytes tha comment: Should be located in rather then part_of when we get the appropriate relation. xref: TAO:0005163 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:33:42Z @@ -22296,9 +22299,9 @@ namespace: zebrafish_anatomy def: "Digestive system duct that collects bile from the canaliculus and transports bile through the liver." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005164 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:39:12Z @@ -22309,9 +22312,9 @@ namespace: zebrafish_anatomy def: "Digestive system duct that collects bile from the hepatic bile duct and the cystic duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005165 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001100 ! hepatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:43:23Z @@ -22322,9 +22325,9 @@ namespace: zebrafish_anatomy def: "Duct that connects the gall bladder and the common bile duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005166 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:56:39Z @@ -22338,9 +22341,9 @@ synonym: "papilla duodeni major" RELATED [] synonym: "papilla Vateri" EXACT [] xref: TAO:0005167 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:59:27Z @@ -22351,9 +22354,9 @@ namespace: zebrafish_anatomy def: "Vein that is central to a lobule in the liver." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005168 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-04-21T02:46:13Z @@ -22364,9 +22367,9 @@ namespace: zebrafish_anatomy def: "Duct that collects bile from the bile ductules and connects to the extrahepatic bile duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005169 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:19:40Z @@ -22377,9 +22380,9 @@ namespace: zebrafish_anatomy def: "Bile duct that collects from the intrahepatic ducts and feeds into the common bile duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005170 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001100 ! hepatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:26:36Z @@ -22390,8 +22393,8 @@ namespace: zebrafish_anatomy def: "A tube shaped multi-tissue structure lined with epithelial cells that collects secretions and routes them to their destination." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005171 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-04-27T04:45:59Z @@ -22404,9 +22407,9 @@ synonym: "1st lobe" EXACT [] synonym: "first lobe" EXACT [] xref: TAO:0005172 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2009-04-27T05:51:33Z @@ -22420,9 +22423,9 @@ synonym: "gall bladder lobe" EXACT [] synonym: "second lobe" EXACT [] xref: TAO:0005173 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T05:59:16Z @@ -22435,9 +22438,9 @@ synonym: "3rd lobe" EXACT [] synonym: "third lobe" EXACT [] xref: TAO:0005174 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2009-04-27T06:04:51Z @@ -22451,8 +22454,8 @@ subset: cell_slim synonym: "primary commissural interneuron" EXACT [] xref: TAO:0005175 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T01:41:54Z @@ -22466,8 +22469,8 @@ subset: cell_slim synonym: "secondary commissural interneuron" EXACT [] xref: TAO:0005176 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:07:49Z @@ -22482,8 +22485,8 @@ synonym: "V2b interneuron" RELATED [] synonym: "ventral longitudinal interneuron" EXACT [] xref: TAO:0005177 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:14:18Z @@ -22497,8 +22500,8 @@ subset: cell_slim synonym: "dorsal longitudinal interneuron" EXACT [] xref: TAO:0005178 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:21:58Z @@ -22512,8 +22515,8 @@ subset: cell_slim synonym: "middle primary motoneuron" EXACT [] xref: TAO:0005179 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:02:28Z @@ -22527,8 +22530,8 @@ subset: cell_slim synonym: "rostral primary motoneuron" EXACT [] xref: TAO:0005180 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:05:40Z @@ -22542,8 +22545,8 @@ subset: cell_slim synonym: "variable primary motoneuron" EXACT [] xref: TAO:0005181 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:38:21Z @@ -22558,9 +22561,9 @@ synonym: "middle dorsal 2 ipsilateral interneuron " EXACT [] xref: TAO:0005183 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-18T05:05:22Z @@ -22575,9 +22578,9 @@ synonym: "middle dorsal 2 contralateral llf interneuron " EXACT [] xref: TAO:0005184 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-18T05:16:33Z @@ -22592,9 +22595,9 @@ synonym: "middle dorsal 2 contralateral mlf interneuron " EXACT [] xref: TAO:0005185 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-18T05:18:53Z @@ -22608,8 +22611,8 @@ subset: cell_slim synonym: "bifurcate commissural interneuron" EXACT [] xref: TAO:0005186 is_a: ZFA:0005231 ! bifurcate interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T11:38:16Z @@ -22623,9 +22626,9 @@ synonym: "middle medial interneuron " EXACT [] xref: TAO:0005187 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T12:31:49Z @@ -22639,9 +22642,9 @@ synonym: "middle rostral 1 interneuron " EXACT [] xref: TAO:0005188 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T12:33:39Z @@ -22655,9 +22658,9 @@ synonym: "middle rostral 2 interneuron " EXACT [] xref: TAO:0005189 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T12:40:02Z @@ -22671,9 +22674,9 @@ synonym: "middle ventral 1 neuron " EXACT [] xref: TAO:0005190 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T01:10:53Z @@ -22687,9 +22690,9 @@ synonym: "middle ventral 2 neuron " EXACT [] xref: TAO:0005191 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T01:15:56Z @@ -22703,9 +22706,9 @@ synonym: "rostral intermediate 2 caudal interneuron " EXACT [] xref: TAO:0005192 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T02:39:18Z @@ -22719,9 +22722,9 @@ synonym: "rostral intermediate 2 rostral interneuron " EXACT [] xref: TAO:0005193 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T03:08:46Z @@ -22736,9 +22739,9 @@ synonym: "rostral lateral 1 interneuron " EXACT [] xref: TAO:0005194 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T03:22:51Z @@ -22753,9 +22756,9 @@ synonym: "middle dorsal 3 contralateral llf interneuron " EXACT [] xref: TAO:0005195 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-22T05:10:40Z @@ -22770,9 +22773,9 @@ synonym: "middle dorsal 3 contralateral mlf interneuron " EXACT [] xref: TAO:0005196 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-22T05:13:02Z @@ -22787,9 +22790,9 @@ synonym: "middle dorsal 3 ipsilateral interneuron " EXACT [] xref: TAO:0005197 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-22T05:15:04Z @@ -22803,9 +22806,9 @@ synonym: "rostral lateral 2 interneuron " EXACT [] xref: TAO:0005198 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T04:33:20Z @@ -22818,9 +22821,9 @@ subset: cell_slim synonym: "rostral lateral 2 rostral interneuron " EXACT [] xref: TAO:0005199 is_a: ZFA:0005198 ! RoL2 -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T04:48:39Z @@ -22833,9 +22836,9 @@ subset: cell_slim synonym: "rostral lateral 2 caudal interneuron " EXACT [] xref: TAO:0005200 is_a: ZFA:0005198 ! RoL2 -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T04:49:28Z @@ -22849,9 +22852,9 @@ synonym: "rostral lateral 3 interneuron " EXACT [] xref: TAO:0005201 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T05:06:36Z @@ -22865,9 +22868,9 @@ synonym: "rostral medial 1 caudal interneuron " EXACT [] xref: TAO:0005202 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T05:08:26Z @@ -22881,9 +22884,9 @@ synonym: "rostral medial 1 rostral interneuron " EXACT [] xref: TAO:0005203 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T05:09:50Z @@ -22896,9 +22899,9 @@ subset: cell_slim synonym: "rostral ventral 3 interneuron " EXACT [] is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:14:08Z @@ -22912,9 +22915,9 @@ synonym: "rostral medial 2 lateral interneuron " EXACT [] xref: TAO:0005205 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:43:42Z @@ -22928,9 +22931,9 @@ synonym: "rostral medial 2 medial interneuron " EXACT [] xref: TAO:0005206 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:45:01Z @@ -22944,9 +22947,9 @@ synonym: "rostral medial 3 lateral interneuron " EXACT [] xref: TAO:0005207 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:46:19Z @@ -22960,9 +22963,9 @@ synonym: "rostral medial 3 medial interneuron " RELATED [] xref: TAO:0005208 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:52:04Z @@ -22974,9 +22977,9 @@ def: "Is a CNS interneuron that is part of the hindbrain." [GOC:cvs, ORCiD:0000- subset: cell_slim xref: TAO:0005209 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T10:21:27Z @@ -22988,8 +22991,8 @@ def: "CNS interneurons located in the midbrain." [GOC:cvs, ORCiD:0000-0002-2244- subset: cell_slim xref: TAO:0005210 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T11:14:28Z @@ -23002,9 +23005,9 @@ subset: cell_slim synonym: "mesencephalon lateral interneuron" EXACT [] xref: TAO:0005211 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T12:35:19Z @@ -23018,9 +23021,9 @@ synonym: "mesencephalon medial interneuron" EXACT [] xref: TAO:0005212 is_a: ZFA:0005210 ! midbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T01:05:12Z @@ -23033,9 +23036,9 @@ subset: cell_slim synonym: "mesencephalon lateral rostral interneuron" EXACT [] xref: TAO:0005213 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T01:26:45Z @@ -23048,9 +23051,9 @@ subset: cell_slim synonym: "mesencephalon lateral caudal interneuron" EXACT [] xref: TAO:0005214 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T01:29:37Z @@ -23063,9 +23066,9 @@ subset: cell_slim synonym: "mesencephalon lateral medial interneuron" EXACT [] xref: TAO:0005215 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:21:45Z @@ -23078,9 +23081,9 @@ subset: cell_slim synonym: "mesencephalon medial 1 interneuron" EXACT [] xref: TAO:0005216 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:23:47Z @@ -23093,9 +23096,9 @@ subset: cell_slim synonym: "caudal ventral interneuron" EXACT [] xref: TAO:0005217 is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000949 ! rhombomere 7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:33:31Z @@ -23108,9 +23111,9 @@ subset: cell_slim synonym: "caudal dorsal interneuron" EXACT [] xref: TAO:0005218 is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000949 ! rhombomere 7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:42:52Z @@ -23123,9 +23126,9 @@ synonym: "choroid vascular circuit" RELATED [] synonym: "CVC" EXACT [] xref: TAO:0005219 is_a: ZFA:0000099 ! brain vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001443 ! choroid plexus -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2009-07-09T02:58:20Z @@ -23136,8 +23139,8 @@ namespace: zebrafish_anatomy def: "A melanophore stripe that forms the immature pigment pattern." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005220 is_a: ZFA:0001463 ! melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-07-09T03:59:45Z @@ -23148,8 +23151,8 @@ namespace: zebrafish_anatomy def: "A larval melanophore stripe that forms a band extending from the head to the tail along the dorsal apex of the myotomes." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005221 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-07-09T04:04:10Z @@ -23160,8 +23163,8 @@ namespace: zebrafish_anatomy def: "A larval melanophore stripe that forms a band, of pigmentation extending from the bases of the eyes on each side of the midline to the top of the tail, that underlies the myotomes bilaterally, still is dorsal to the yolk." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005222 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2009-07-09T04:05:57Z @@ -23172,8 +23175,8 @@ namespace: zebrafish_anatomy def: "The larval melanophore stripe that is at the level of the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005223 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2009-07-09T04:29:18Z @@ -23184,8 +23187,8 @@ namespace: zebrafish_anatomy def: "The larval melanophore stripe that forms a band over the ventral surface of the yolk sac." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005224 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-07-09T04:30:34Z @@ -23196,8 +23199,8 @@ namespace: zebrafish_anatomy def: "Lip that covers the lower portion of the mouth." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002060 is_a: ZFA:0007006 ! lip -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T04:42:58Z @@ -23208,8 +23211,8 @@ namespace: zebrafish_anatomy def: "Lip that covers the upper portion of the mouth." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001970 is_a: ZFA:0007006 ! lip -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T04:43:52Z @@ -23223,9 +23226,9 @@ synonym: "proto neuromast" RELATED [] synonym: "proto-neuromast" RELATED [] xref: TAO:0005227 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2009-07-09T04:49:53Z @@ -23237,9 +23240,9 @@ def: "A portion of tissue that contains the choroid vasculature. It lies at the synonym: "choroid" EXACT [ISBN:1402070861] xref: TAO:0005229 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-14T02:05:16Z @@ -23252,8 +23255,8 @@ subset: cell_slim synonym: "commissural bifurcating longitudinal" EXACT [] xref: TAO:0005230 is_a: ZFA:0005231 ! bifurcate interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-17T01:12:14Z @@ -23265,8 +23268,8 @@ def: "Is a spinal interneuron that has an axon that splits into roughly equal si subset: cell_slim xref: TAO:0005231 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-17T01:22:50Z @@ -23280,8 +23283,8 @@ synonym: "larval VeLD" RELATED [] synonym: "multipolar commissural descending interneuron" EXACT [] xref: TAO:0005232 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:46:32Z @@ -23296,8 +23299,8 @@ synonym: "commissural descending interneurons" EXACT [ZFIN:ZDB-PUB-081114-2] synonym: "V2a interneuron" RELATED [] xref: TAO:0005233 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:55:01Z @@ -23310,8 +23313,8 @@ subset: cell_slim synonym: "commissural longitudinal ascending interneuron" EXACT [] xref: TAO:0005234 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:14:51Z @@ -23324,8 +23327,8 @@ subset: cell_slim synonym: "unipolar commissural descending interneuron" RELATED [] xref: TAO:0005235 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:26:07Z @@ -23342,8 +23345,8 @@ synonym: "prorubricyte" EXACT [ZFIN:ZDB-PUB-070221-1] xref: CL:0000549 xref: TAO:0005236 is_a: ZFA:0005237 ! erythroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-08-10T05:29:27Z @@ -23357,8 +23360,8 @@ synonym: "normoblast" EXACT [] xref: CL:0000765 xref: TAO:0005237 is_a: ZFA:0009325 ! erythroid lineage cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-10T05:13:41Z @@ -23373,9 +23376,9 @@ synonym: "renin secreting cell" EXACT [] xref: CL:0000648 xref: TAO:0005238 is_a: ZFA:0009118 ! smooth muscle cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-10T05:41:07Z @@ -23389,9 +23392,9 @@ synonym: "plug cell" EXACT [] xref: CL:0007022 xref: TAO:0005239 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2009-08-10T06:26:10Z @@ -23410,8 +23413,8 @@ synonym: "Kolmer-Agduhr cell" EXACT [] xref: CL:0005007 xref: TAO:0005240 is_a: ZFA:0007120 ! cerebrospinal fluid contacting neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2009-08-11T02:50:27Z @@ -23430,8 +23433,8 @@ synonym: "rubricyte" EXACT [] xref: CL:0000550 xref: TAO:0005241 is_a: ZFA:0005237 ! erythroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T03:38:32Z @@ -23446,8 +23449,8 @@ synonym: "multiciliated epithelial cell" EXACT [] xref: CL:0005012 xref: TAO:0005242 is_a: ZFA:0009035 ! ciliated epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:29:39Z @@ -23462,8 +23465,8 @@ synonym: "single-ciliated epithelial cell" EXACT [] xref: CL:0005013 xref: TAO:0005243 is_a: ZFA:0009035 ! ciliated epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:30:15Z @@ -23477,8 +23480,8 @@ synonym: "auditory support cell" EXACT [] xref: CL:0005014 xref: TAO:0005244 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:41:03Z @@ -23493,8 +23496,8 @@ xref: CL:0005002 xref: TAO:0002148 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:53:40Z @@ -23508,9 +23511,9 @@ synonym: "blastemal fibroblast" EXACT [] synonym: "blastemal fibroblasts" EXACT PLURAL [] xref: TAO:0005246 is_a: ZFA:0009026 ! fibroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005147 ! regenerating tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-12T01:43:26Z @@ -23524,8 +23527,8 @@ synonym: "circumferential ascending interneuron" EXACT [] synonym: "V1 interneuron" RELATED [] xref: TAO:0005247 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-08-21T04:22:15Z @@ -23538,9 +23541,9 @@ synonym: "TCB" EXACT [ZFIN:ZDB-PUB-080908-10] xref: TAO:0005248 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005027 ! posterior cerebral vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005219 ! choroid plexus vascular circuit -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2009-11-02T04:07:52Z @@ -23552,9 +23555,9 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th xref: TAO:0001079 xref: TAO:0005249 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-11-10T02:31:54Z @@ -23565,9 +23568,9 @@ namespace: zebrafish_anatomy def: "Microvessel of the blood circulation system lined with vascular endothelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005250 is_a: ZFA:0005251 ! microcirculatory vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:15:32Z @@ -23579,9 +23582,9 @@ def: "A portion of tissue that consists of a tube composed of epithelial cells t synonym: "vasculature" RELATED [] xref: TAO:0005251 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:16:24Z @@ -23592,9 +23595,9 @@ namespace: zebrafish_anatomy def: "Microvessel of the lymphatic system lined with a single layer of overlapping endothelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005252 is_a: ZFA:0005251 ! microcirculatory vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:27:39Z @@ -23606,9 +23609,9 @@ def: "Simple squamous epithelium that lines the capsule of the renal glomerulus. synonym: "parietal epithelial layer" EXACT [] xref: TAO:0005253 is_a: ZFA:0001498 ! simple squamous epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005254 ! renal glomerular capsule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2009-11-11T01:39:19Z @@ -23620,9 +23623,9 @@ def: "Portion of tissue that encapsulates the glomerulus of the renal corpuscle. synonym: "Bowman's capsule " EXACT [] xref: TAO:0005254 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2009-11-11T01:45:02Z @@ -23633,9 +23636,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the blood vasculature. Feeds into capillaries. Arterioles carry blood away from the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002138 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:46:54Z @@ -23647,9 +23650,9 @@ def: "A portion of tissue formed between the base of the intestinal villi that i synonym: "intestinal crypt" RELATED [ZFIN:ZDB-PUB-090217-11] xref: TAO:0005256 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-07T12:26:13Z @@ -23660,8 +23663,8 @@ namespace: zebrafish_anatomy def: "The vascular endothelium that lines blood vasculature." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005257 is_a: ZFA:0001639 ! vascular endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:16:38Z @@ -23672,9 +23675,9 @@ namespace: zebrafish_anatomy def: "The vascular endothelium that lines the lymph vessels." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005258 is_a: ZFA:0001639 ! vascular endothelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005844 ! lymph vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:18:09Z @@ -23685,8 +23688,8 @@ namespace: zebrafish_anatomy def: "Blood vessel endothelium that has tight junctions between the endothelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005259 is_a: ZFA:0005257 ! blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:19:54Z @@ -23697,8 +23700,8 @@ namespace: zebrafish_anatomy def: "Blood vessel endothelium that has pores that allow passage small molecules and proteins." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005260 is_a: ZFA:0005257 ! blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:21:55Z @@ -23709,8 +23712,8 @@ namespace: zebrafish_anatomy def: "Fenestrated blood vessel endothelium with pores that are large enough for blood cells to pass. The basal lamina and gap junctions may be discontinuous." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005261 is_a: ZFA:0005260 ! fenestrated blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:51:27Z @@ -23722,8 +23725,8 @@ def: "Caudal procurrent ray that is dorsally located on the caudal fin skeleton. synonym: "dorsal procurrent caudal-fin ray" EXACT [] xref: TAO:0001829 is_a: ZFA:0001584 ! caudal fin procurrent ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:06:39Z @@ -23735,8 +23738,8 @@ def: "Caudal procurrent ray that is ventrally located on the caudal fin skeleton synonym: "ventral procurrent ray" EXACT [] xref: TAO:0001830 is_a: ZFA:0001584 ! caudal fin procurrent ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:13:14Z @@ -23750,8 +23753,8 @@ synonym: "ligamentum primordiale " EXACT [] synonym: "maxillo-mandibular ligament" EXACT [] xref: TAO:0001828 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:28:51Z @@ -23762,8 +23765,8 @@ namespace: zebrafish_anatomy def: "Ligament that connects the premaxilla to the maxilla." [TAO:curator] xref: TAO:0001827 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:52:49Z @@ -23774,8 +23777,8 @@ namespace: zebrafish_anatomy comment: The DLF in zebrafish is not homologous to the Mammalian DLF. Mammalian DLF is in brain, the fish DLF is in spinal cord. synonym: "DLF" RELATED [] is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T04:19:10Z @@ -23786,8 +23789,8 @@ namespace: zebrafish_anatomy def: "Muscle that moves parts of the body in a superior direction to an erect position. Antagonistic to depressor muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005267 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-03T05:15:15Z @@ -23798,8 +23801,8 @@ namespace: zebrafish_anatomy def: "A muscle that brings a body part closer to the sagittal plane of the body." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002136 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T12:59:52Z @@ -23810,8 +23813,8 @@ namespace: zebrafish_anatomy def: "A muscle that moves a body part away from the sagittal plane of the body." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002135 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T01:05:41Z @@ -23822,8 +23825,8 @@ namespace: zebrafish_anatomy def: "A muscle that moves body parts into an inferior direction or lowered position. Antagonistic to erector muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005270 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T01:15:51Z @@ -23834,8 +23837,8 @@ namespace: zebrafish_anatomy def: "A muscle that decrease the angle of a joint." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005271 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T01:20:04Z @@ -23849,9 +23852,9 @@ synonym: "juvenile ovary" EXACT [ZFIN:ZDB-PUB-070305-2] xref: TAO:0005272 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001262 ! gonad primordium -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2009-12-09T11:35:20Z @@ -23863,9 +23866,9 @@ def: "A thin layer of smooth muscle immediately beneath the base of the villi wh synonym: "intestinal lamina muscularis mucosae" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0005273 is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T01:36:48Z @@ -23876,8 +23879,8 @@ namespace: zebrafish_anatomy def: "A non-striated muscle that is composed of spindle-shaped cells. Smooth muscle usually is organized into sheets that line cavitated organs." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005274 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T02:57:18Z @@ -23888,8 +23891,8 @@ namespace: zebrafish_anatomy def: "Fin muscle that is located on the anterior edge of the fin. Arrector muscles change the angle of the leading edge of the fin during swimming." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002147 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T04:50:10Z @@ -23899,8 +23902,8 @@ name: inclinator muscle namespace: zebrafish_anatomy xref: TAO:0005276 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T04:51:38Z @@ -23911,8 +23914,8 @@ namespace: zebrafish_anatomy def: "Muscle, composed of long cylindrical, multinucleated cells that attaches to the skeleton via tendons." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005277 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T05:06:51Z @@ -23922,9 +23925,9 @@ name: enteric longitudinal muscle namespace: zebrafish_anatomy def: "Smooth muscle of the enteric muscle system in which the cells are aligned parallel to the lumen of the gut." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001324 ! enteric musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T05:48:52Z @@ -23935,9 +23938,9 @@ namespace: zebrafish_anatomy def: "Smooth muscle of the enteric muscle system in which the cells are aligned perpendicular to the lumen of the gut." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005279 is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001324 ! enteric musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T05:51:25Z @@ -23948,8 +23951,8 @@ namespace: zebrafish_anatomy def: "Muscle composed of cardiac muscle cells that is part of the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005280 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T06:04:03Z @@ -23961,9 +23964,9 @@ def: "The part of the nephron that filters blood." [GOC:cvs, ORCiD:0000-0002-224 synonym: "Malpighian corpuscle" EXACT [] xref: TAO:0005281 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005282 ! nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T01:11:46Z @@ -23974,9 +23977,9 @@ namespace: zebrafish_anatomy def: "Functional unit of the kidney that filters waste." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002153 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T02:47:46Z @@ -23990,9 +23993,9 @@ synonym: "inter-glomerular space" EXACT [] synonym: "urinary space" EXACT [] xref: TAO:0005283 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T02:51:01Z @@ -24003,11 +24006,11 @@ namespace: zebrafish_anatomy def: "Capillary that is part of the renal glomerulus. Glomerular capillary endothelial membranes in zebrafish normally have a fenestrated morphology that is visible at the ultrastructural level." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-000824-1] xref: TAO:0005284 is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001288 ! renal glomerulus relationship: part_of ZFA:0005305 ! kidney vasculature relationship: part_of ZFA:0005590 ! capillary loop nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:00:45Z @@ -24019,9 +24022,9 @@ def: "Membrane between the mesonephric podocytes and the renal glomerular capill synonym: "glomerular filtration membrane" EXACT [] xref: TAO:0005285 is_a: ZFA:0001485 ! basal lamina -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001288 ! renal glomerulus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:26:30Z @@ -24032,9 +24035,9 @@ namespace: zebrafish_anatomy def: "Middle layer of the glomerular basement membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005286 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:52:52Z @@ -24045,9 +24048,9 @@ namespace: zebrafish_anatomy def: "Layer of the glomerular basement membrane adjacent to the glomerular capillary." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005287 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:56:00Z @@ -24058,9 +24061,9 @@ namespace: zebrafish_anatomy def: "Layer of the glomerular basement membrane adjacent to the podocytes and capsular space." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005288 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:56:32Z @@ -24071,9 +24074,9 @@ namespace: zebrafish_anatomy def: "Tubes in the kidney that collect and transport urine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-071029-9] xref: TAO:0005289 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T04:36:59Z @@ -24084,9 +24087,9 @@ namespace: zebrafish_anatomy def: "Renal tubule that connects to the renal corpuscle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005290 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:39:12Z @@ -24097,9 +24100,9 @@ namespace: zebrafish_anatomy def: "Portion of the renal tubule which is just posterior to the proximal convoluted tubule." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005291 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:41:23Z @@ -24110,9 +24113,9 @@ namespace: zebrafish_anatomy def: "Portion of the renal tubule which is just posterior to the distal early tubule." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005292 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:43:22Z @@ -24124,9 +24127,9 @@ def: "Portion of the renal tubule which is just posterior to the proximal straig synonym: "distal early tubules" EXACT PLURAL [] xref: TAO:0005293 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:44:30Z @@ -24137,8 +24140,8 @@ namespace: zebrafish_anatomy def: "Renal duct that collects the output from renal tubules." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005294 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T01:17:47Z @@ -24149,8 +24152,8 @@ namespace: zebrafish_anatomy def: "Blood vessel that runs along the rostral-caudal axis of the fish." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005295 is_a: ZFA:0001073 ! axial vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:24:10Z @@ -24161,9 +24164,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel that runs along the rostral-caudal axis of the fish." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001073 ! axial vasculature is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:24:34Z @@ -24174,9 +24177,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of cranial vasculature." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005297 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:25:23Z @@ -24187,9 +24190,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel that is located in the head." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005298 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:25:47Z @@ -24200,9 +24203,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005299 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005095 ! fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:52:39Z @@ -24213,9 +24216,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel part of fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005300 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005095 ! fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:53:08Z @@ -24226,9 +24229,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005301 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005096 ! pectoral fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:54:07Z @@ -24239,9 +24242,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel part of pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005302 is_a: ZFA:0005300 ! fin lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005096 ! pectoral fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:54:43Z @@ -24252,10 +24255,10 @@ namespace: zebrafish_anatomy def: "Lymph vessel that is located in the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005303 is_a: ZFA:0005300 ! fin lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005097 ! caudal fin vasculature relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:55:44Z @@ -24266,9 +24269,9 @@ namespace: zebrafish_anatomy def: "Blood vessel located within the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005304 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005097 ! caudal fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:55:49Z @@ -24279,9 +24282,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005305 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-20T03:02:06Z @@ -24292,9 +24295,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005306 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-20T03:02:27Z @@ -24305,10 +24308,10 @@ namespace: zebrafish_anatomy def: "Arteriole that carries blood into the glomerular capillaries." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002139 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T03:02:56Z @@ -24319,10 +24322,10 @@ namespace: zebrafish_anatomy def: "Arteriole that carries blood out of the glomerular capillaries." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002140 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T03:05:49Z @@ -24333,9 +24336,9 @@ namespace: zebrafish_anatomy def: "Capillary that is part of the pronephric glomerulus. Glomerular capillary endothelial membranes in zebrafish normally have a fenestrated morphology that is visible at the ultrastructural level." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-000824-1] xref: TAO:0005309 is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:29:44Z @@ -24347,9 +24350,9 @@ def: "Portion of tissue that encapsulates the glomerulus of the pronephros." [GO synonym: "Bowman's capsule " EXACT [] xref: TAO:0005310 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:39:01Z @@ -24361,9 +24364,9 @@ def: "Simple squamous epithelium that lines the capsule of the pronephric glomer synonym: "pronephric parietal epithelial layer" EXACT [] xref: TAO:0005311 is_a: ZFA:0001498 ! simple squamous epithelium -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0005310 ! pronephric glomerular capsule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:40:01Z @@ -24377,9 +24380,9 @@ synonym: "inter-glomerular space" EXACT [] synonym: "urinary space" EXACT [] xref: TAO:0005312 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:41:05Z @@ -24391,9 +24394,9 @@ def: "Membrane between the pronephric podocytes and the pronephric glomerular ca synonym: "pronephric glomerular filtration membrane" EXACT [] xref: TAO:0005313 is_a: ZFA:0001485 ! basal lamina -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:59:03Z @@ -24404,9 +24407,9 @@ namespace: zebrafish_anatomy def: "Any of the tubular multi-tissue structures through which blood circulates in the body." [vHOG:curator] xref: TAO:0002137 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T02:17:51Z @@ -24417,9 +24420,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the blood vasculature formed by the anastomosis of capillaries. Venules carry blood toward the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005315 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T03:29:15Z @@ -24432,9 +24435,9 @@ synonym: "fin membrane pectoral fin bud" RELATED [] xref: TAO:0005316 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000085 ! apical ectodermal ridge pectoral fin bud -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-02-10T02:37:39Z @@ -24447,9 +24450,9 @@ synonym: "pectoral fin membrane" EXACT [] xref: TAO:0005317 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005316 ! fin fold pectoral fin bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-02-10T03:27:29Z @@ -24471,8 +24474,8 @@ def: "Lymph vessel that is located between the somites." [GOC:cvs, ORCiD:0000-00 synonym: "islv" EXACT [] xref: TAO:0005319 is_a: ZFA:0005105 ! lymph vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:28:00Z @@ -24483,8 +24486,8 @@ namespace: zebrafish_anatomy synonym: "dllv" EXACT [] xref: TAO:0005320 is_a: ZFA:0005296 ! axial lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:29:42Z @@ -24495,9 +24498,9 @@ namespace: zebrafish_anatomy def: "Smooth muscle that is part of the blood vessel wall." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060216-3] xref: TAO:0005321 is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005314 ! blood vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-10T05:39:30Z @@ -24512,9 +24515,9 @@ xref: CL:0005009 xref: TAO:0005322 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009374 ! kidney epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-02-10T06:32:34Z @@ -24528,8 +24531,8 @@ xref: CL:0005006 xref: TAO:0005323 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0007123 ! ionocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T01:18:18Z @@ -24541,9 +24544,9 @@ def: "Ionocyte located in the gills." [GOC:cvs, ORCiD:0000-0002-2244-7917] subset: cell_slim xref: TAO:0005324 is_a: ZFA:0005323 ! ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T01:22:16Z @@ -24557,9 +24560,9 @@ synonym: "extrabranchial ionocyte" RELATED [] synonym: "skin ionocyte" EXACT [] xref: TAO:0005325 is_a: ZFA:0005323 ! ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T02:13:14Z @@ -24573,9 +24576,9 @@ synonym: "NaK-MRC" RELATED [] synonym: "NaR cell" RELATED [] xref: TAO:0005326 is_a: ZFA:0005325 ! integument ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T02:29:17Z @@ -24589,9 +24592,9 @@ synonym: "HR cell" RELATED [] synonym: "VH-MRC" RELATED [] xref: TAO:0005327 is_a: ZFA:0005325 ! integument ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T02:32:20Z @@ -24605,8 +24608,8 @@ xref: CL:0005001 xref: TAO:0005328 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24620,8 +24623,8 @@ xref: CL:0005003 xref: TAO:0005329 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24635,8 +24638,8 @@ xref: CL:0005004 xref: TAO:0005331 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24650,8 +24653,8 @@ xref: CL:0005005 xref: TAO:0005332 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24662,9 +24665,9 @@ namespace: zebrafish_anatomy def: "A multi-tissue mediosagittal cylinder-shaped structure, clearly isolated from the jaw and adhered by differentiated plicae to the lateral walls. It is composed of a muscle surrounded by a squamous epithelium." [ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24] xref: TAO:0005333 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000547 ! mouth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T03:04:28Z @@ -24675,9 +24678,9 @@ namespace: zebrafish_anatomy def: "The thick, high squamous-stratified epithelium that covers the lips. It contains abundant melanocytes, many mucous cells and has well differentiated taste buds." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060921-12] xref: TAO:0005334 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007006 ! lip -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T03:12:14Z @@ -24689,8 +24692,8 @@ def: "Embryonic structure that forms from the anterior gut epithelium at the lev xref: TAO:0005335 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0005336 ! presumptive swim bladder -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2010-03-18T03:59:33Z @@ -24703,9 +24706,9 @@ synonym: "swim bladder anlage" RELATED [ZFIN:ZDB-PUB-100202-11] xref: TAO:0005336 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-03-18T04:20:42Z @@ -24717,8 +24720,8 @@ def: "Portion of tissue that forms from the swim bladder epithelium at the anter xref: TAO:0002145 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000076 ! swim bladder -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-03-18T04:28:20Z @@ -24731,9 +24734,9 @@ synonym: "posterior recess of diencephalic ventricle" EXACT [ZFIN:ZDB-PUB-091221 synonym: "recessus posterior " EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0005338 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T05:40:53Z @@ -24744,9 +24747,9 @@ namespace: zebrafish_anatomy def: "Is a diencephalic nucleus located in the caudal periventricular hypothalamus surrounding the lateral recess of the third ventricle." [ZFIN:ZDB-PUB-091221-27] xref: TAO:0005339 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000324 ! caudal periventricular hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T05:52:56Z @@ -24757,9 +24760,9 @@ namespace: zebrafish_anatomy def: "A diencephalic nucleus that is part of caudal periventricular hypothalmus surrounding the posterior recess of the third ventricle." [ZFIN:ZDB-PUB-091221-27] xref: TAO:0005340 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000324 ! caudal periventricular hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T05:59:24Z @@ -24772,8 +24775,8 @@ synonym: "medial longitudinal CA tract" EXACT [ZFIN:ZDB-PUB-091221-28] synonym: "mlct" EXACT [] xref: TAO:0005341 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:07:36Z @@ -24784,8 +24787,8 @@ namespace: zebrafish_anatomy def: "CNS white matter, an axonal tract between ventral diencephalon and ventral telencephalon. At 3 d, the anterior catecholaminergic tract includes noradrenergic projections from the hindbrain and dopaminergic projections from ventral dopaminergic neurons. During later development, other catecholaminergic projections may also contribute to the anterior catecholaminergic tract." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-091221-28] xref: TAO:0002144 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:11:28Z @@ -24796,8 +24799,8 @@ namespace: zebrafish_anatomy def: "CNS white matter, axonal tract interconnecting catecholaminergic cell groups in the posterior tuberculum and hypothalamus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-091221-28] xref: TAO:0005343 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:13:25Z @@ -24808,8 +24811,8 @@ namespace: zebrafish_anatomy def: "CNS white matter, axonal tract between the preoptic region and ventral diencephalon." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-091221-28] xref: TAO:0005344 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:14:28Z @@ -24821,8 +24824,8 @@ def: "Connective tissue in which fat is stored. All adipose tissue in the zebraf synonym: "white adipose tissue" EXACT [] xref: TAO:0002134 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-19T10:04:38Z @@ -24833,9 +24836,9 @@ namespace: zebrafish_anatomy def: "Portion of the pancreatic duct, external to the pancreas body that connects the pancreas with the hepatopancreatic ampulla." [ZFIN:ZDB-PUB-050623-3] xref: TAO:0005346 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2010-03-19T03:17:51Z @@ -24846,8 +24849,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001732 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:13:30Z @@ -24858,8 +24861,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001980 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:31:28Z @@ -24870,8 +24873,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001981 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:31:47Z @@ -24882,8 +24885,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001982 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:32:12Z @@ -24894,8 +24897,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002149 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:32:37Z @@ -24906,8 +24909,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 11. May have hemal arch and rib." [ZFIN:ZDB-PUB-020807-1] xref: TAO:0002152 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:33:09Z @@ -24918,8 +24921,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 9." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002150 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:33:57Z @@ -24930,8 +24933,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 10." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002151 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:34:16Z @@ -24943,8 +24946,8 @@ def: "First lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 1 " EXACT [] xref: TAO:0001754 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:26:13Z @@ -24956,8 +24959,8 @@ def: "Second lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 2" EXACT [] xref: TAO:0001755 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:28:14Z @@ -24969,8 +24972,8 @@ def: "Third lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 3" EXACT [] xref: TAO:0001756 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:28:28Z @@ -24982,8 +24985,8 @@ def: "Fourth lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 4" EXACT [] xref: TAO:0001757 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:09Z @@ -24995,8 +24998,8 @@ def: "Fifth lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 5" EXACT [] xref: TAO:0001758 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:18Z @@ -25008,8 +25011,8 @@ def: "Sixth lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 6" EXACT [] xref: TAO:0001759 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:33Z @@ -25021,8 +25024,8 @@ def: "Seventh lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917 synonym: "dorsal fin ray 7" EXACT [] xref: TAO:0001760 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:52Z @@ -25033,9 +25036,9 @@ namespace: zebrafish_anatomy def: "First proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001818 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005364 ! dorsal fin pterygiophore 1 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:39:57Z @@ -25046,9 +25049,9 @@ namespace: zebrafish_anatomy def: "Second proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001819 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005365 ! dorsal fin pterygiophore 2 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:40:13Z @@ -25060,8 +25063,8 @@ def: "Dorsal fin pterygiophore that is the rostralmost pterygiophore of the dors synonym: "dorsal fin radial 1" EXACT [] xref: TAO:0002094 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:47:57Z @@ -25073,8 +25076,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 1 of the dorsal synonym: "dorsal fin radial 2" EXACT [] xref: TAO:0005365 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:12Z @@ -25086,8 +25089,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 2 of the dorsal f synonym: "dorsal fin radial 3" EXACT [] xref: TAO:0005366 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:36Z @@ -25099,8 +25102,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 3 of the dorsal synonym: "dorsal fin radial 4" EXACT [] xref: TAO:0005367 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:48Z @@ -25112,8 +25115,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 4 of the dorsal synonym: "dorsal fin radial 5" EXACT [] xref: TAO:0005368 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:00Z @@ -25125,8 +25128,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 5 of the dorsal synonym: "dorsal fin radial 6" EXACT [] xref: TAO:0005369 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:26Z @@ -25138,8 +25141,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 6 of the dorsal synonym: "dorsal fin radial 7" EXACT [] xref: TAO:0005370 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:39Z @@ -25151,8 +25154,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 7 of the dorsal synonym: "dorsal fin radial 8" EXACT [] xref: TAO:0005371 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:53:09Z @@ -25163,9 +25166,9 @@ namespace: zebrafish_anatomy def: "First distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005372 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005364 ! dorsal fin pterygiophore 1 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:54:49Z @@ -25176,9 +25179,9 @@ namespace: zebrafish_anatomy def: "Second distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005373 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005365 ! dorsal fin pterygiophore 2 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:55:31Z @@ -25189,9 +25192,9 @@ namespace: zebrafish_anatomy def: "Third distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005374 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005366 ! dorsal fin pterygiophore 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:11Z @@ -25202,9 +25205,9 @@ namespace: zebrafish_anatomy def: "Fourth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005375 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005367 ! dorsal fin pterygiophore 4 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:21Z @@ -25215,9 +25218,9 @@ namespace: zebrafish_anatomy def: "Fifth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005376 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005368 ! dorsal fin pterygiophore 5 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:32Z @@ -25228,9 +25231,9 @@ namespace: zebrafish_anatomy def: "Sixth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005377 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005369 ! dorsal fin pterygiophore 6 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:48Z @@ -25241,9 +25244,9 @@ namespace: zebrafish_anatomy def: "Seventh distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005378 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005370 ! dorsal fin pterygiophore 7 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:04Z @@ -25254,9 +25257,9 @@ namespace: zebrafish_anatomy def: "Eighth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005379 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005371 ! dorsal fin pterygiophore 8 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:19Z @@ -25267,9 +25270,9 @@ namespace: zebrafish_anatomy def: "Third proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005380 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005366 ! dorsal fin pterygiophore 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:39Z @@ -25280,9 +25283,9 @@ namespace: zebrafish_anatomy def: "Fourth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005381 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005367 ! dorsal fin pterygiophore 4 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:08Z @@ -25293,9 +25296,9 @@ namespace: zebrafish_anatomy def: "Fifth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005382 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005368 ! dorsal fin pterygiophore 5 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:20Z @@ -25306,9 +25309,9 @@ namespace: zebrafish_anatomy def: "Sixth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005383 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005369 ! dorsal fin pterygiophore 6 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:30Z @@ -25319,9 +25322,9 @@ namespace: zebrafish_anatomy def: "Seventh proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005384 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005370 ! dorsal fin pterygiophore 7 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:42Z @@ -25332,9 +25335,9 @@ namespace: zebrafish_anatomy def: "Eighth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005385 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005371 ! dorsal fin pterygiophore 8 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:54Z @@ -25346,8 +25349,8 @@ def: "Anatomical space that is an opening in a bone, usually for passage of bloo synonym: "foramina" EXACT PLURAL [] xref: TAO:0001736 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:01:27Z @@ -25358,8 +25361,8 @@ namespace: zebrafish_anatomy def: "Foramen in the occipital region of neurocranium to allow passage of spinal cord." [TAO:curator] xref: TAO:0002045 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:02:49Z @@ -25370,8 +25373,8 @@ namespace: zebrafish_anatomy def: "Anatomical space that is a concavity, shallow depression, or groove on a bone." [TAO:curator] xref: TAO:0001743 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:04:59Z @@ -25382,8 +25385,8 @@ namespace: zebrafish_anatomy def: "Anatomical space that is the external opening of a gill slit connecting the pharyngeal cavity to the exterior. Gill opening is usually paired and located on the lateral or ventral surfaces of the head." [TAO:curator] xref: TAO:0002057 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:06:34Z @@ -25394,9 +25397,9 @@ namespace: zebrafish_anatomy def: "Gill ray is a slender, usually rod-like cartilage within a gill filament and ligamentously tied to its associated pharyngeal arch bone or cartilage." [TAO:curator] xref: TAO:0001856 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:17:01Z @@ -25407,8 +25410,8 @@ namespace: zebrafish_anatomy def: "Lateral line system on head and pectoral girdle." [TAO:WD] xref: TAO:0001873 is_a: ZFA:0001468 ! anterior lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:42:45Z @@ -25419,9 +25422,9 @@ namespace: zebrafish_anatomy def: "Sensory canal associated with the infraorbital bones. Located in close proximity to the otic and supraorbital sensory canals at their union. The infraorbital sensory canal is bilaterally paired. The canal has 3 pores. The first opens dorsally below the nasal sac, the second opens laterally posterior to the anterior maxilary barbel, the third pore is present where infraorbital 1 meets infraorbital 2." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0001811 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2010-04-23T01:44:27Z @@ -25432,9 +25435,9 @@ namespace: zebrafish_anatomy def: "Sensory canal between and in close proximity posteriorly with the post-otic and preoperculo-mandibular sensory canals, and anteriorly with the supraorbital and infraorbital sensory canals. The otic sensory canal is bilaterally paired." [TAO:curator] xref: TAO:0001629 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:45:04Z @@ -25446,9 +25449,9 @@ def: "Sensory canal that forms dorsal to the horizontal semicircular canal of t synonym: "postotic sensory canal" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001619 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:45:48Z @@ -25459,9 +25462,9 @@ namespace: zebrafish_anatomy def: "Sensory canal lateral or ventral to and in close proximity to the otic and post-otic sensory canals at their union. The preoperculo-mandibular sensory canal is bilaterally paired and associated with the preopercle, angular and dentary bones." [TAO:curator] xref: TAO:0001812 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:59:39Z @@ -25472,9 +25475,9 @@ namespace: zebrafish_anatomy def: "Sensory canal contained in the nasal and frontal bones. It contains 4 or 5 neuromast. The first neuromast is positioned in the tubular nasal bone and the other neuromasts are located in the frontal bone. The canal is anterior to and in close proximity to the otic and infraorbital sensory canals. The supraorbital sensory canal is bilaterally paired." [TAO:curator, ZFIN:ZDB-PUB-031103-11] xref: TAO:0001810 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2010-04-23T02:00:48Z @@ -25485,9 +25488,9 @@ namespace: zebrafish_anatomy def: "Nerve that is a branch of cranial nerve VII that passes through or around the suspensorium to innervate muscles and sensory organs on or near pharyngeal arch 2." [TAO:curator] xref: TAO:0002010 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000664 ! cranial nerve VII -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T02:54:34Z @@ -25499,9 +25502,9 @@ def: "Actinotrichium that is part of the anal fin skeleton." [TAO:curator] synonym: "anal fin actinotricia" EXACT PLURAL [] xref: TAO:0000375 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000167 ! anal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:54:17Z @@ -25512,8 +25515,8 @@ namespace: zebrafish_anatomy def: "First lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001769 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:18Z @@ -25524,8 +25527,8 @@ namespace: zebrafish_anatomy def: "Second lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001770 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:31Z @@ -25536,8 +25539,8 @@ namespace: zebrafish_anatomy def: "Third epidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001771 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:43Z @@ -25548,8 +25551,8 @@ namespace: zebrafish_anatomy def: "Fourth lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001772 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:55Z @@ -25560,8 +25563,8 @@ namespace: zebrafish_anatomy def: "Fifth lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001773 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:58:07Z @@ -25572,8 +25575,8 @@ namespace: zebrafish_anatomy def: "Sixth lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001774 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:58:19Z @@ -25584,8 +25587,8 @@ namespace: zebrafish_anatomy def: "Seventh lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001775 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:58:32Z @@ -25597,8 +25600,8 @@ def: "Fossa or chamber on anterior portion of orbital region of neurocranium tha comment: Dbxref for ZFIN changed to match actual database accession number. Old Dbxref ZDB-ANAT-100614-560 correct Dbxref ZDB-ANAT-100614-60. xref: TAO:0001927 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T05:11:17Z @@ -25609,8 +25612,8 @@ namespace: zebrafish_anatomy def: "Barbel that is associated with the anterior nostril. Anterior nasal barbel is paired." [TAO:curator] xref: TAO:0001937 is_a: ZFA:0000622 ! barbel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T05:12:00Z @@ -25623,9 +25626,9 @@ synonym: "ZMB" EXACT [ZFIN:ZDB-PUB-140813-6] xref: TAO:0001938 is_a: ZFA:0000622 ! barbel is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T05:13:52Z @@ -25636,9 +25639,9 @@ namespace: zebrafish_anatomy def: "The dorsal part of the ear. Comprises the three semicircular canals, which connect to the utricle." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005409 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T10:43:19Z @@ -25649,9 +25652,9 @@ namespace: zebrafish_anatomy def: "The ventral portion of the ear. It contains the saccule and the lagena which are the primary auditory organs." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005410 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T10:51:56Z @@ -25662,9 +25665,9 @@ namespace: zebrafish_anatomy def: "Duct that forms when the nonampullary ends of the posterior and anterior semicircular canals merge. The common crus descends connecting the semicircular canals to the horizontal canal." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-010912-7, ZFIN:ZDB-PUB-020403-4] xref: TAO:0005411 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005409 ! pars superior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T11:03:13Z @@ -25675,9 +25678,9 @@ namespace: zebrafish_anatomy def: "Duct that crosses the midline connecting the sacculi." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005412 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: ceri creation_date: 2010-05-17T03:08:14Z @@ -25688,9 +25691,9 @@ namespace: zebrafish_anatomy def: "Portion of organism substance that is an extracellular fluid that has a low potassium concentration." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-7] xref: TAO:0005413 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005459 ! perilymphatic space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T03:11:11Z @@ -25701,10 +25704,10 @@ namespace: zebrafish_anatomy def: "The portion of organism substance that is an extracellular fluid that has a high potassium and sodium concentration. It bathes the hair cells and is thought to be generated by the semicircular canal epithelium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090731-6] xref: TAO:0005414 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005409 ! pars superior ear relationship: part_of ZFA:0005410 ! pars inferior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T03:11:30Z @@ -25715,9 +25718,9 @@ namespace: zebrafish_anatomy def: "Foramen in the inner ear." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005415 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-18T11:11:52Z @@ -25728,8 +25731,8 @@ namespace: zebrafish_anatomy def: "Inner ear foramen that connects the lagena to the caudal half of the saccule." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-020403-4] xref: TAO:0005416 is_a: ZFA:0005415 ! inner ear foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-19T07:13:29Z @@ -25739,8 +25742,8 @@ name: utriculosaccular foramen namespace: zebrafish_anatomy def: "Inner ear foramen that connects the rostral saccula to the utricle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-020403-4] is_a: ZFA:0005415 ! inner ear foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-19T07:15:09Z @@ -25752,8 +25755,8 @@ def: "Opening in the neurocranium to allow communication between the swim bladde synonym: "auditory fenestrae" EXACT PLURAL [] xref: TAO:0002066 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:28:33Z @@ -25764,8 +25767,8 @@ namespace: zebrafish_anatomy def: "Foramen through which cranial nerve VIII (auditory) exits." [TAO:curator] xref: TAO:0001742 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:29:43Z @@ -25776,8 +25779,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the autopalatine and lateral ethmoid and bones. Autopalatine-lateral ethmoid joint is paired." [TAO:curator] xref: TAO:0001608 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:31:28Z @@ -25788,8 +25791,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the autopalatine cartilage or bone and maxilla." [TAO:curator] xref: TAO:0001942 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2010-05-25T05:32:51Z @@ -25800,8 +25803,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates autopalatine and vomer bones. Autopalatine vomer joint is paired." [TAO:curator] xref: TAO:0001784 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:34:03Z @@ -25812,8 +25815,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the basioccipital and exoccipital. Basioccipital exoccipital joint is paired." [TAO:curator] xref: TAO:0002038 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:55:17Z @@ -25825,9 +25828,9 @@ def: "Actinotrichium that is part of the caudal fin skeleton." [TAO:curator] synonym: "caudal fin actinotrichia" EXACT PLURAL [] xref: TAO:0000437 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T06:07:35Z @@ -25838,8 +25841,8 @@ namespace: zebrafish_anatomy def: "A multi-tissue structure that is comprised of a secretory epithelial layer and a connective tissue layer." [http://en.wikipedia.org/wiki/Serous_membrane] xref: TAO:0005425 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-05-26T10:36:36Z @@ -25850,8 +25853,8 @@ namespace: zebrafish_anatomy def: "Foramen that is located in the coracoid." [TAO:curator] xref: TAO:0001737 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T01:35:35Z @@ -25862,8 +25865,8 @@ namespace: zebrafish_anatomy def: "Foramen located on the dentary for passage of the mandibular nerve." [TAO:curator] xref: TAO:0002012 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T01:36:29Z @@ -25875,8 +25878,8 @@ def: "Foramen in the orbital region of the neurocranium for the passage of the o synonym: "optic nerve (II) foramen" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0002025 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:34:08Z @@ -25887,8 +25890,8 @@ namespace: zebrafish_anatomy def: "Foramen for the passage of the olfactory nerve or cranial nerve 1." [TAO:curator] xref: TAO:0001804 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:35:17Z @@ -25899,8 +25902,8 @@ namespace: zebrafish_anatomy def: "Foramen in the bone or cartilage comprising the anterior wall of the orbit, and through which passes at least the deep ophthalmic branch of cranial nerve V (trigeminal)." [TAO:curator] xref: TAO:0002031 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:36:02Z @@ -25911,8 +25914,8 @@ namespace: zebrafish_anatomy def: "Foramen that is located in the scapula. The scapular foramen is paired and formed by a ring of bone." [TAO:curator] xref: TAO:0001735 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:37:13Z @@ -25923,8 +25926,8 @@ namespace: zebrafish_anatomy def: "Foramen through which the superficial ophthalmic nerve passes." [TAO:curator] xref: TAO:0001748 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:38:20Z @@ -25935,8 +25938,8 @@ namespace: zebrafish_anatomy def: "Barbel that originates on the chin." [TAO:curator] xref: TAO:0002024 is_a: ZFA:0000622 ! barbel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T05:43:41Z @@ -25947,8 +25950,8 @@ namespace: zebrafish_anatomy def: "Acellular anatomical structure that is a natural outgrowth, prominence, or point that is part of the surface of a tooth." [TAO:curator] xref: TAO:0001973 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-05-26T06:11:37Z @@ -25960,8 +25963,8 @@ def: "Skeletal element which is a slender, horny, flexible, unsegmented fibril w synonym: "actinotrichia" EXACT PLURAL [] xref: TAO:0000089 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-06-08T04:31:42Z @@ -25971,9 +25974,9 @@ name: pectoral fin nerve namespace: zebrafish_anatomy def: "Nerve that is part of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-20T10:18:37Z @@ -25983,8 +25986,8 @@ name: pectoral fin motor nerve namespace: zebrafish_anatomy def: "Motor nerve that is located in the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005436 ! pectoral fin nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-20T10:19:45Z @@ -25994,8 +25997,8 @@ name: pectoral fin sensory nerve namespace: zebrafish_anatomy def: "Sensory nerve that innervates the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005436 ! pectoral fin nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-20T10:21:38Z @@ -26005,8 +26008,8 @@ name: pectoral fin motor nerve 1 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:22:40Z @@ -26016,8 +26019,8 @@ name: pectoral fin motor nerve 2 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:27:40Z @@ -26027,8 +26030,8 @@ name: pectoral fin motor nerve 3 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and 2 and rostral of nerve 4 and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:28:55Z @@ -26039,8 +26042,8 @@ namespace: zebrafish_anatomy def: "Fossa of opercle that articulates with hyomandibular condyle for opercle." [TAO:curator] xref: TAO:0001928 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-24T02:57:49Z @@ -26051,9 +26054,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is a fluid-filled canal in the integument and usually dermal bones, and contains one or more neuromasts." [TAO:curator] xref: TAO:0001612 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-24T05:31:47Z @@ -26064,8 +26067,8 @@ namespace: zebrafish_anatomy def: "Sensory canal on trunk which is posterior to the pectoral girdle and often reaching to the caudal fin. The trunk sensory canal is bilaterally paired." [TAO:curator] xref: TAO:0001617 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-24T05:39:49Z @@ -26076,8 +26079,8 @@ namespace: zebrafish_anatomy def: "Sensory canal that crosses over the dorsal midline and in close proximity to the contralateral post-otic sensory canals. The supratemporal sensory canal is unpaired." [TAO:curator] xref: TAO:0001630 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T10:45:28Z @@ -26087,9 +26090,9 @@ name: neuromast foramen namespace: zebrafish_anatomy def: "Foramen in a bone that is part of a sensory canal." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005443 ! sensory canal -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-28T10:26:50Z @@ -26100,8 +26103,8 @@ namespace: zebrafish_anatomy def: "Sensory canal that is a side branch between a sensory canal proximally and a pore at its distal end. Sensory canal tubule is bilaterally paired although often imperfectly so." [TAO:curator] xref: TAO:0001933 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T10:46:49Z @@ -26112,9 +26115,9 @@ namespace: zebrafish_anatomy def: "Sensory canal associated with the preopercle bone. It lies in close proximity with the otic and post-otic sensory canals at their union, and anteroventrally with the mandibular sensory canal. The preopercular sensory canal is bilaterally paired." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001813 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2010-06-25T10:58:48Z @@ -26125,8 +26128,8 @@ namespace: zebrafish_anatomy def: "An anatomical space that is an opening, usually at the end of a canal or duct, on the surface of the integument or the lining of an internal anatomical space." [TAO:curator] xref: TAO:0001791 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-28T11:08:35Z @@ -26136,8 +26139,8 @@ name: pectoral fin motor nerve 4 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the ventral side of the fin and innervates the ventral side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-28T01:47:43Z @@ -26148,9 +26151,9 @@ namespace: zebrafish_anatomy def: "Sensory canal associated with the angular and dentary bones. Located anterior and ventral to and in close proximity with the preoperculo-mandibular sensory canal. The mandible sensory canal is bilaterally paired and does not meet at the mandibular symphysis. The mandibular lateral line canal has 3 neuromast located between the canal pores. Two neuromast are located in the portion of the can in the dentary bone. The third neuromast is located in the anguloarticular bone. The rostral end of the canal has a terminal pore adjacent to the mandibular symphysis. There are three more pores, two, at the posterior of the dentary and the anterior of the anguloarticular share a common epithelial pore." [TAO:curator, ZFIN:ZDB-PUB-031103-11] xref: TAO:0001814 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2010-06-25T12:27:58Z @@ -26162,9 +26165,9 @@ def: "Tract which originates from several clusters of cell bodies in the rostral synonym: "TPC" RELATED [ZFIN:ZDB-PUB-961014-1268] synonym: "tract of the posterior commissure" EXACT [ZFIN:ZDB-PUB-961014-421] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000320 ! caudal commissure -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-07-21T01:49:43Z @@ -26175,8 +26178,8 @@ namespace: zebrafish_anatomy def: "Opening in the prootic. The basicapsular fenestra is paired." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "basicapsular fenestrae" EXACT PLURAL [] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T05:40:06Z @@ -26187,8 +26190,8 @@ namespace: zebrafish_anatomy def: "Fossa where the anteromedial rim is formed by the prootic, the remainder of the fossa is formed by the exoccipital and pterotic." [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001974 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T05:47:28Z @@ -26200,8 +26203,8 @@ def: "Foramen formed between the anterolateral extension of the prootic that con synonym: "anterior trigemino-facialis foramen of Howes" EXACT [] synonym: "trigeminal notch of Harrington" EXACT [] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T05:53:27Z @@ -26211,8 +26214,8 @@ name: sinus impar namespace: zebrafish_anatomy def: "Perilymphatic compartment of the zebrafish ear. Chamber positioned ventral of the medulla, the anterior end surrounds the posterior portion of the transverse canal." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-010912-7] is_a: ZFA:0005459 ! perilymphatic space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:01:50Z @@ -26223,8 +26226,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the dorsal hypohyal and urohyal bones. Dorsal hypohyal-urohyal joint is paired." [TAO:curator] xref: TAO:0001847 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:02:25Z @@ -26235,8 +26238,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the dorsal hypohyal and ventral hypohyal bones. Dorsal hypohyal-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001845 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:02:53Z @@ -26246,9 +26249,9 @@ name: perilymphatic space namespace: zebrafish_anatomy def: "Space that contains perilymph." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:03:28Z @@ -26258,8 +26261,8 @@ name: atrium of sinus impar namespace: zebrafish_anatomy def: "Bilaterally paired perilymphatic chambers posterior to the sinus impar. These connect to the anterior end of the otic duct." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-010912-7] is_a: ZFA:0005459 ! perilymphatic space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:06:23Z @@ -26269,8 +26272,8 @@ name: perilymphatic duct namespace: zebrafish_anatomy def: "Duct that contains perilymph." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:15:02Z @@ -26280,8 +26283,8 @@ name: otic duct namespace: zebrafish_anatomy def: "Pair of perilymphatic ducts that extend from the dorsal ends of the atria of the sinus impar, pass on either side of the medulla and merge and extend dorsally toward the surface of the head." [ZFIN:ZDB-PUB-010912-7] is_a: ZFA:0005461 ! perilymphatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:15:52Z @@ -26291,9 +26294,9 @@ name: oral ectoderm namespace: zebrafish_anatomy def: "Ectoderm of the oral region." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0000016 ! ectoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-07-21T03:22:11Z @@ -26304,8 +26307,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the dentary and anguloarticular. Dentary-anguloarticular joint is paired." [TAO:curator] xref: TAO:0001749 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:56:09Z @@ -26316,8 +26319,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and branchiostegal ray bones. Ceratohyal-branchiostegal ray joint is paired." [TAO:curator] xref: TAO:0001850 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:56:35Z @@ -26328,8 +26331,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and ventral hypohyal bones. Ceratohyal-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001844 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:56:50Z @@ -26340,8 +26343,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and dorsal hypohyal bones. Ceratohyal-dorsal hypohyal joint is paired." [TAO:curator] xref: TAO:0001843 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:57:08Z @@ -26352,8 +26355,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the frontal and pterotic. Frontal-pterotic joint is paired." [TAO:curator] xref: TAO:0001711 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:57:53Z @@ -26364,8 +26367,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the hyomandibula bone and metapterygoid bone." [TAO:curator] xref: TAO:0001979 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:58:13Z @@ -26376,8 +26379,8 @@ namespace: zebrafish_anatomy def: "Joint between the right and left coracoid bones of the pectoral girdle." [TAO:curator] xref: TAO:0002040 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:58:45Z @@ -26388,8 +26391,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the left and right basipterygium cartilage or bone. Inter-basipterygium joint is unpaired." [TAO:curator] xref: TAO:0001939 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:59:58Z @@ -26403,9 +26406,9 @@ synonym: "interfrontal suture" EXACT [ZFIN:ZDB-PUB-060323-12] synonym: "metopic suture" RELATED [ZFIN:ZDB-PUB-060323-12] xref: TAO:0001922 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:00Z @@ -26416,8 +26419,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the interhyal and epihyal bones, or interhyal and ceratohyal cartilages. Interhyal-epihyal joint is paired." [TAO:curator] xref: TAO:0001841 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:23Z @@ -26428,8 +26431,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the left and right hypobranchial 3 cartilages or bones. Inter-hypobranchial 3 joint is unpaired." [TAO:curator] xref: TAO:0001863 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:35Z @@ -26440,8 +26443,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the left and right premaxillary bones. Inter-premaxillary joint is unpaired." [TAO:curator] xref: TAO:0001950 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:59Z @@ -26452,8 +26455,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the contralateral ventral hypohyal bones or the contralateral ceratobranchial cartilages. Inter-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001846 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:02:17Z @@ -26464,8 +26467,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the lateral ethmoid and frontal. Lateral ethmoid-frontal joint is paired." [TAO:curator] xref: TAO:0002032 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:02:40Z @@ -26476,8 +26479,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the opercle and interopercle. Opercle-interopercle joint is paired." [TAO:curator] xref: TAO:0001710 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:03:01Z @@ -26488,8 +26491,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the orbitosphenoid cartilage or bone and lateral ethmoid cartilage or bone. Orbitosphenoid-lateral ethmoid joint is paired." [TAO:curator] xref: TAO:0001941 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:03:17Z @@ -26500,8 +26503,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates orbitosphenoid and prootic bones. Orbitosphenoid-prootic joint is paired." [TAO:curator] xref: TAO:0001794 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:03:30Z @@ -26512,8 +26515,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the prootic and exoccipital. Prootic-exoccipital joint is paired." [TAO:curator] xref: TAO:0002034 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:41:27Z @@ -26524,8 +26527,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the prootic and pterosphenoid. Prootic-pterosphenoid joint is paired. The parasphenoid borders the prootic medially in a syndesmosis." [TAO:curator, ZFIN:ZDB-PUB-961014-192] xref: TAO:0002033 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:41:53Z @@ -26536,8 +26539,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the pterosphenoid and orbitosphenoid. Pterosphenoid-orbitosphenoid joint is paired." [TAO:curator] xref: TAO:0001831 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:42:11Z @@ -26549,10 +26552,10 @@ def: "Joint that articulates quadrate and anguloarticular bones. Quadrate-articu synonym: "jaw joint" RELATED [] xref: TAO:0001802 is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0000467 ! anguloarticular relationship: overlaps ZFA:0000621 ! quadrate -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:44:59Z @@ -26563,8 +26566,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates quadrate and hyomandibula bones. Quadrate-hyomandibula joint is paired." [TAO:curator] xref: TAO:0001801 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:45:14Z @@ -26575,8 +26578,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates quadrate and metapterygoid bones. Quadrate-metapterygoid joint is paired." [TAO:curator] xref: TAO:0001803 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:45:27Z @@ -26587,8 +26590,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ventral hypohyal and urohyal bones. Ventral hypohyal-urohyal joint is paired." [TAO:curator] xref: TAO:0001848 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:46:00Z @@ -26601,8 +26604,8 @@ synonym: "dentary symphysis" EXACT [] synonym: "inter-mandibular joint" EXACT [] xref: TAO:0001851 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:55:35Z @@ -26612,9 +26615,9 @@ name: endocardial precursor namespace: zebrafish_anatomy def: "Is a portion of tissue part of the heart primordium which will give rise to the endocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:50:10Z @@ -26624,9 +26627,9 @@ name: myocardial precursor namespace: zebrafish_anatomy def: "Portion of tissue that will develop into the myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:53:48Z @@ -26638,9 +26641,9 @@ def: "Groove that is in the ventral optic cup remnant of the optic fissure." [GO synonym: "optic fissure" RELATED [] is_a: ZFA:0001690 ! groove relationship: develops_from ZFA:0001284 ! optic fissure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2010-07-21T03:00:49Z @@ -26651,8 +26654,8 @@ namespace: zebrafish_anatomy def: "Fossa where the hyomandibula articulates with the sphenotic and prootic to form the hyomandibular-otic region joint." [ZFIN:ZDB-PUB-961014-192] xref: TAO:0002090 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:19:01Z @@ -26664,9 +26667,9 @@ def: "Organ entity that is typically involved in mechanical support and may have xref: TAO:0001890 xref: VSAO:0000128 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000434 ! skeletal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:20:29Z @@ -26677,8 +26680,8 @@ namespace: zebrafish_anatomy def: "Surface structure that is a portion of skin that projects or hangs from the body." [TAO:curator] xref: TAO:0001951 is_a: ZFA:0000368 ! integument -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:21:23Z @@ -26689,9 +26692,9 @@ namespace: zebrafish_anatomy def: "Surface structure that is the region of the head in front of and between the orbits, and above the lower jaw. Nares are located on the snout." [TAO:curator] xref: TAO:0001712 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:22:07Z @@ -26702,8 +26705,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the epihyal and ceratohyal bones. Epihyal-ceratohyal joint is paired." [TAO:curator] xref: TAO:0001842 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:32:09Z @@ -26714,8 +26717,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the epihyal and branchiostegal ray bones. Epihyal-branchiostegal ray joint is paired." [TAO:curator] xref: TAO:0001849 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:32:23Z @@ -26727,9 +26730,9 @@ def: "Fine ridges on surface of scale, often parallel to the circumference of sc synonym: "circuli" EXACT PLURAL [] xref: TAO:0002051 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:33:11Z @@ -26740,8 +26743,8 @@ namespace: zebrafish_anatomy def: "Is a bony partially gas filled sphere located ventral and anterior to the inner ear. The prootic bulla is paired." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0002111 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T02:22:46Z @@ -26754,8 +26757,8 @@ comment: The interopercle ossifies in the interoperculomandibular ligament, whic synonym: "interoperculomandibular ligament" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001687 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:38:04Z @@ -26766,8 +26769,8 @@ namespace: zebrafish_anatomy def: "Lateral ethmoid-autopalatine ligament is a ligament that connects the lateral ethmoid to the autopalatine." [TAO:curator] xref: TAO:0001944 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:38:20Z @@ -26778,8 +26781,8 @@ namespace: zebrafish_anatomy def: "Lateral ethmoid-ectopterygoid ligament is a ligament that connects the lateral ethmoid to the ectopterygoid." [TAO:curator] xref: TAO:0001685 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:38:32Z @@ -26790,8 +26793,8 @@ namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 4 and vertebra 5." [TAO:curator] xref: TAO:0001940 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T01:33:36Z @@ -26802,8 +26805,8 @@ namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses." [TAO:curator] xref: TAO:0002054 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T01:33:50Z @@ -26814,8 +26817,8 @@ namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 6 and vertebra 7." [TAO:curator] xref: TAO:0002055 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T01:34:02Z @@ -26826,8 +26829,8 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure composed of connective tissue that surrounds, the internal portions of the olfactory epithelium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002035 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T11:47:54Z @@ -26838,8 +26841,8 @@ namespace: zebrafish_anatomy def: "Mental barbel that originates on the chin, in an anteromedial position relative to the outer mental barbel. The inner mental barbel is nearer to the mandibular symphysis than is the outer mental barbel." [TAO:curator] xref: TAO:0001969 is_a: ZFA:0005433 ! mental barbel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:08:04Z @@ -26850,9 +26853,9 @@ namespace: zebrafish_anatomy def: "Anatomical cluster that is the upper roof of the mouth that is roofed by bones such as the parasphenoid, prevomer, metapterygoid, orbitosphenoid." [TAO:curator] xref: TAO:0002093 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:10:28Z @@ -26863,8 +26866,8 @@ namespace: zebrafish_anatomy def: "Shallow area that exists on the prootic." [TAO:curator] xref: TAO:0002052 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:30:37Z @@ -26875,8 +26878,8 @@ namespace: zebrafish_anatomy def: "Dermal bone that is ring-shaped or cylindrical and surrounds a sensory canal." [TAO:curator] xref: TAO:0001932 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:32:05Z @@ -26889,8 +26892,8 @@ synonym: "caudal principal lepidotrichium 1 " EXACT [] synonym: "caudal principal ray 1 " EXACT [] xref: TAO:0001713 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:45:32Z @@ -26903,8 +26906,8 @@ synonym: "caudal principal lepidotrichium 3 " EXACT [] synonym: "caudal principal ray 3" EXACT [] xref: TAO:0001715 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:01:02Z @@ -26917,8 +26920,8 @@ synonym: "caudal principal lepidotrichium 2 " EXACT [] synonym: "caudal principal ray 2" EXACT [] xref: TAO:0001714 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:57:40Z @@ -26931,8 +26934,8 @@ synonym: "caudal principal lepidotrichium 4 " EXACT [] synonym: "caudal principal ray 4" EXACT [] xref: TAO:0001716 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:01:37Z @@ -26945,8 +26948,8 @@ synonym: "caudal principal lepidotrichium 5" EXACT [] synonym: "caudal principal ray 5" EXACT [] xref: TAO:0001717 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:04Z @@ -26959,8 +26962,8 @@ synonym: "caudal principal lepidotrichium 6" EXACT [] synonym: "caudal principal ray 6" EXACT [] xref: TAO:0001718 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -26973,8 +26976,8 @@ synonym: "caudal principal lepidotrichium 7" EXACT [] synonym: "caudal principal ray 7" EXACT [] xref: TAO:0001719 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -26987,8 +26990,8 @@ synonym: "caudal principal lepidotrichium 8" EXACT [] synonym: "caudal principal ray 8" EXACT [] xref: TAO:0001720 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27001,8 +27004,8 @@ synonym: "caudal principal lepidotrichium 9" EXACT [] synonym: "caudal principal ray 9" EXACT [] xref: TAO:0001721 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27015,8 +27018,8 @@ synonym: "caudal principal lepidotrichium 10" EXACT [] synonym: "caudal principal ray 10" EXACT [] xref: TAO:0001722 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27029,8 +27032,8 @@ synonym: "caudal principal lepidotrichium 11" EXACT [] synonym: "caudal principal ray 11" EXACT [] xref: TAO:0001723 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27043,8 +27046,8 @@ synonym: "caudal principal lepidotrichium 12" EXACT [] synonym: "caudal principal ray 12" EXACT [] xref: TAO:0001724 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27057,8 +27060,8 @@ synonym: "caudal principal lepidotrichium 14" EXACT [] synonym: "caudal principal ray 14" EXACT [] xref: TAO:0001726 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27071,8 +27074,8 @@ synonym: "caudal principal lepidotrichium 15" EXACT [] synonym: "caudal principal ray 15" EXACT [] xref: TAO:0001727 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27085,8 +27088,8 @@ synonym: "caudal principal lepidotrichium 16" EXACT [] synonym: "caudal principal ray 16" EXACT [] xref: TAO:0001728 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27099,8 +27102,8 @@ synonym: "caudal principal lepidotrichium 17" EXACT [] synonym: "caudal principal ray 17" EXACT [] xref: TAO:0001729 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27113,8 +27116,8 @@ synonym: "caudal principal lepidotrichium 18" EXACT [] synonym: "caudal principal ray 18" EXACT [] xref: TAO:0001730 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27127,8 +27130,8 @@ synonym: "caudal principal lepidotrichium 19" EXACT [] synonym: "caudal principal ray 19" EXACT [] xref: TAO:0001731 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27139,8 +27142,8 @@ namespace: zebrafish_anatomy def: "Scale that is associated with the lateral line sensory canal." [TAO:curator] xref: TAO:0001824 is_a: ZFA:0000277 ! scale -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:49:27Z @@ -27151,8 +27154,8 @@ namespace: zebrafish_anatomy def: "The bony shelf above orbit is an anatomical cluster formed by the dorsolateral portions of the lateral ethmoid, frontal and sphenotic bones that forms the dorsal margin of the orbit." [TAO:curator] xref: TAO:0001686 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:52:58Z @@ -27163,8 +27166,8 @@ namespace: zebrafish_anatomy def: "Dermal bone that is located on or subjacent to the surface anywhere on the body and that is not part of the general complement of scales, dermal bone of the dermatocranium, postcranial axial skeleton or paired fin skeleton. Bony plate may exist singly, or as unpaired or paired clusters or series." [TAO:curator] xref: TAO:0002053 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:53:33Z @@ -27175,8 +27178,8 @@ namespace: zebrafish_anatomy def: "Caudal fin lepidotrichium that is distally branched." [TAO:curator] xref: TAO:0002062 is_a: ZFA:0001550 ! caudal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:55:31Z @@ -27187,8 +27190,8 @@ namespace: zebrafish_anatomy def: "Dorsal fin ray that is distally branched." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001785 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:55:54Z @@ -27200,8 +27203,8 @@ def: "Anal fin lepidotrichium that is distally branched." [TAO:curator] synonym: "anal fin branched ray" EXACT [] xref: TAO:0001992 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:56:47Z @@ -27212,9 +27215,9 @@ namespace: zebrafish_anatomy def: "Anatomical space between bones of the neurocranium. Frequently closes during development." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001738 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:27:16Z @@ -27225,8 +27228,8 @@ namespace: zebrafish_anatomy def: "Fontanel within the frontal bone near the frontal-sphenotic joint. Lateral fontanel of frontal is paired." [TAO:curator] xref: TAO:0002011 is_a: ZFA:0005536 ! fontanel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:28:46Z @@ -27237,8 +27240,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the first centrum." [TAO:curator] xref: TAO:0001879 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:29:54Z @@ -27249,8 +27252,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the second centrum." [TAO:curator] xref: TAO:0001878 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:06Z @@ -27261,8 +27264,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the third centrum." [TAO:curator] xref: TAO:0001880 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:18Z @@ -27273,8 +27276,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the fourth centrum." [TAO:curator] xref: TAO:0001881 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:34Z @@ -27285,8 +27288,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the fifth centrum." [TAO:curator] xref: TAO:0001751 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:51Z @@ -27297,8 +27300,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the sixth centrum." [TAO:curator] xref: TAO:0001750 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:31:02Z @@ -27310,8 +27313,8 @@ def: "Joint that articulates the hyomandibular cartilage or bone and otic region synonym: "hyomandibula-sphenotic-prootic joint" EXACT [] xref: TAO:0001947 is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:38:51Z @@ -27322,9 +27325,9 @@ namespace: zebrafish_anatomy def: "Actinotrichium that is part of the pectoral fin." [TAO:curator] xref: TAO:0000544 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:50:19Z @@ -27335,9 +27338,9 @@ namespace: zebrafish_anatomy def: "Actinotrichium that is part of the pelvic fin." [TAO:curator] xref: TAO:0000596 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:50:46Z @@ -27348,8 +27351,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium 1 is the leading or marginal ray of the fin and articulates with the scapula. Lepidotrichium 1 is commonly segmented but unbranched." [TAO:curator] xref: TAO:0001761 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:55:24Z @@ -27360,8 +27363,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the second most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001762 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:58:18Z @@ -27372,8 +27375,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the third most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001763 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:58:24Z @@ -27384,8 +27387,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the sixth most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001766 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:08Z @@ -27396,8 +27399,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the seventh most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001767 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:13Z @@ -27408,8 +27411,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the fifth most anterior pectoral ray , usually branched and segmented." [TAO:curator] xref: TAO:0001765 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:20Z @@ -27420,8 +27423,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the fourth most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001764 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:26Z @@ -27432,8 +27435,8 @@ namespace: zebrafish_anatomy def: "First lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001776 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:13:56Z @@ -27444,8 +27447,8 @@ namespace: zebrafish_anatomy def: "Second lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001777 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:15:37Z @@ -27456,8 +27459,8 @@ namespace: zebrafish_anatomy def: "Fourth lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001779 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:15:48Z @@ -27468,8 +27471,8 @@ namespace: zebrafish_anatomy def: "Third lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001778 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:15:48Z @@ -27480,8 +27483,8 @@ namespace: zebrafish_anatomy def: "Anatomical space that is the concavity containing the eye." [TAO:curator] xref: TAO:0001967 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:17:20Z @@ -27492,9 +27495,9 @@ namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "angiogenic sprout" RELATED [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-09-23T05:54:14Z @@ -27505,8 +27508,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the parasphenoid and basioccipital. Parasphenoid-basioccipital joint is paired." [TAO:curator] xref: TAO:0001832 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-09-24T11:52:49Z @@ -27519,9 +27522,9 @@ synonym: "vitreous body" EXACT [] synonym: "vitreous humor" EXACT [] xref: TAO:0002290 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-10T01:16:52Z @@ -27532,9 +27535,9 @@ namespace: zebrafish_anatomy def: "Acellular anatomical structure that is the innermost layer of the optic choroid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070614-11] synonym: "vitreous lamina" EXACT [] is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-10T02:16:43Z @@ -27545,9 +27548,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that composes the opaque fibrous outer layer of the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] xref: TAO:0002289 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-11-11T10:53:23Z @@ -27558,9 +27561,9 @@ namespace: zebrafish_anatomy def: "Clear ocular fluid in the anterior segment of the eye. It is produced primarily by dorsal ciliary epithelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] xref: TAO:0002288 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005876 ! anterior chamber eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-11T11:10:25Z @@ -27572,8 +27575,8 @@ def: "A specialized hair cell that has an elongated kinocilium upon which an oto subset: cell_slim xref: CL:0002450 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-11T01:59:44Z @@ -27583,9 +27586,9 @@ name: anterior segment eye namespace: zebrafish_anatomy def: "Anatomical cluster comprising the rostral portion of the eye; the cornea, lens, iris, ciliary zone, anterior chamber, and annular ligament." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-11T05:44:57Z @@ -27595,9 +27598,9 @@ name: posterior segment eye namespace: zebrafish_anatomy def: "Anatomical cluster comprising the caudal portion of the eye: the retina, posterior chamber, optic choroid, and vitreous." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-12T11:52:42Z @@ -27607,9 +27610,9 @@ name: iris blood vessels namespace: zebrafish_anatomy def: "Blood vessels within the stroma of the iris. The vessels cluster and are more dense at the base of the stroma where the iris is thicker." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001079 ! blood vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-12-01T02:00:15Z @@ -27619,9 +27622,9 @@ name: iris stroma namespace: zebrafish_anatomy def: "Portion of the iris which contains bundles of fibers, most of which are oriented radially around the pupil. The stroma is innervated by the iris blood vessels and develops from the periocular mesenchyme." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-12-01T02:28:06Z @@ -27631,9 +27634,9 @@ name: corneo-scleral junction namespace: zebrafish_anatomy def: "The line where the cornea and the sclera meet." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090309-8] is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-12T03:45:32Z @@ -27643,9 +27646,9 @@ name: ventral canal eye namespace: zebrafish_anatomy def: "Duct present in the angle where the cornea meets the ciliary zone that absorbs the aqueous humor." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-11-12T03:51:50Z @@ -27655,8 +27658,8 @@ name: periocular mesenchyme namespace: zebrafish_anatomy def: "Head mesenchyme surrounding the immature eye that gives rise to specialized structures of the anterior segment of the eye." [ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-12-02T12:29:18Z @@ -27668,9 +27671,9 @@ def: "Modified or toughened vitreous that suspend the lens at the equator to the synonym: "zonules" EXACT PLURAL [] is_a: ZFA:0001487 ! portion of organism substance relationship: develops_from ZFA:0005561 ! vitreous -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-12-02T06:08:45Z @@ -27680,9 +27683,9 @@ name: lens capsule namespace: zebrafish_anatomy def: "The lens capsule is a modified basement membrane that completely surrounds the ocular lens." [GOC:cvs, ORCiD:0000-0002-2244-7917, PMID:18773892] is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-12-03T11:36:36Z @@ -27693,9 +27696,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that are compact accumulations of neurons having roughly similar connections and functions." [GOC:mh, ISBN:0878937420, ORCiD:0000-0001-9114-8737] synonym: "brain nuclei" EXACT PLURAL [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-01-28T05:31:14Z @@ -27705,9 +27708,9 @@ name: ventral thalamus nucleus namespace: zebrafish_anatomy def: "Brain nuclei located in the ventral thalamus." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-02-24T04:49:33Z @@ -27716,9 +27719,9 @@ id: ZFA:0005577 name: tegmental nucleus namespace: zebrafish_anatomy is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-02-24T04:54:52Z @@ -27728,9 +27731,9 @@ name: spinal nerve root namespace: zebrafish_anatomy def: "The multi-tissue structure that is the beginning of the spinal nerve leaving the spinal cord." [http://en.wikipedia.org/wiki/Nerve_root] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-03-04T05:17:42Z @@ -27742,9 +27745,9 @@ def: "Integument ionocyte rich in Na-Cl co-transporter (NCC) activity." [ZFIN:ZD subset: cell_slim synonym: "NCC cell" EXACT [] is_a: ZFA:0005325 ! integument ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-03-07T02:03:05Z @@ -27755,9 +27758,9 @@ namespace: zebrafish_anatomy def: "Rostral portion of pars anterior of the adenohypophysis where corticotropes and lactotropes localize." [ZFIN:ZDB-PUB-080616-4] synonym: "rostral pars distalis" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001195 ! pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2011-04-13T11:44:33Z @@ -27768,9 +27771,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of pars anterior of the adenohypophysis where somatotropes, thyrotropes and gonadotropes are localized. The proximal pars anterior has functional homology to the mammalian pars tuberalis, secreting the same hormones." [ZFIN:ZDB-PUB-080616-4] synonym: " proximal pars distalis" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001195 ! pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2011-04-13T02:37:52Z @@ -27780,8 +27783,8 @@ name: dorsal proneural cluster namespace: zebrafish_anatomy def: "Cluster of cells along the edge of the neural plate that have the potential to become neuroblast." [ZFIN:ZDB-PUB-990921-1] is_a: ZFA:0000068 ! proneural cluster -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2011-04-14T02:02:16Z @@ -27791,8 +27794,8 @@ name: ventral proneural cluster namespace: zebrafish_anatomy def: "Cluster of cells along the center of the neural plate that have the potential to become neuroblast." [ZFIN:ZDB-PUB-990921-1] is_a: ZFA:0000068 ! proneural cluster -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2011-04-14T02:02:55Z @@ -27802,8 +27805,8 @@ name: developing mesonephric nephron namespace: zebrafish_anatomy def: "Anatomical cluster which give rise to mature mesonephric nephrons. Zebrafish continously generate new mesonephric nephrons." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005282 ! nephron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T04:10:09Z @@ -27813,11 +27816,11 @@ name: developing mesonephric proximal tubule namespace: zebrafish_anatomy def: "Renal duct that will develop into the mesonephric proximal tubule." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule relationship: part_of ZFA:0005584 ! developing mesonephric nephron relationship: part_of ZFA:0005590 ! capillary loop nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-27T10:55:07Z @@ -27830,8 +27833,8 @@ synonym: "stage I nephron" EXACT [] is_a: ZFA:0001477 ! portion of tissue is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005587 ! nephron progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T04:25:56Z @@ -27841,9 +27844,9 @@ name: nephron progenitor namespace: zebrafish_anatomy def: "Cluster of cells comprising a portion of tissue which gives rise to new mesonephric nephrons. The cluster contains self-renewing stem cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-110131-33] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2011-04-26T04:26:56Z @@ -27854,8 +27857,8 @@ namespace: zebrafish_anatomy def: "Developing nephron with a comma shaped appearance." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-110131-33] is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005586 ! renal vesicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T04:41:04Z @@ -27867,8 +27870,8 @@ def: "Developing nephron with a tubular morphology that has a renal corpuscle an synonym: "stage II nephron" RELATED [] is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005588 ! comma-shaped body -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T05:07:54Z @@ -27879,8 +27882,8 @@ namespace: zebrafish_anatomy def: "Developing nephron where the developing glomerular capsule has been invaded by a glomerular capillary loop called the glomerular tuft." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005589 ! s-shaped body -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T05:45:15Z @@ -27890,11 +27893,11 @@ name: developing mesonephric distal tubule namespace: zebrafish_anatomy def: "Renal duct that will develop into the mesonephric distal tubule." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule relationship: part_of ZFA:0005584 ! developing mesonephric nephron relationship: part_of ZFA:0005590 ! capillary loop nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-27T10:55:41Z @@ -27906,8 +27909,8 @@ def: "A branched nephron of the mature kidney." [ZFIN:ZDB-PUB-110131-33] synonym: "stage IV nephron" EXACT [] is_a: ZFA:0005282 ! nephron relationship: develops_from ZFA:0005584 ! developing mesonephric nephron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-27T12:15:19Z @@ -27917,9 +27920,9 @@ name: neuraxis flexure namespace: zebrafish_anatomy def: "An anatomical structure that is regional part of the central nervous system where there is a significant bend of the axis." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-05-02T01:03:43Z @@ -27930,8 +27933,8 @@ namespace: zebrafish_anatomy def: "Non-material anatomical entity of two dimensions, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures." [CARO:MAH, ORCiD:0000-0001-9114-8737] xref: CARO:0000010 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ZFIN creation_date: 2011-03-22T10:34:12Z @@ -27944,8 +27947,8 @@ synonym: "caudal principal lepidotrichium 13" EXACT [] synonym: "caudal principal ray 13" EXACT [] xref: TAO:0001725 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-04T02:44:32Z @@ -27957,8 +27960,8 @@ def: "Fin that is one of a pair located ventrally on the organism." [TAO:curator xref: TAO:0002278 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0001383 ! fin bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-11-11T11:22:21Z @@ -27970,8 +27973,8 @@ def: "Fin that is an unpaired fin located in the sagittal plane of the organism. xref: TAO:0002276 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0000040 ! median fin fold -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-11T11:33:02Z @@ -27986,9 +27989,9 @@ subset: cell_slim synonym: "pancreatic E cell" EXACT [] xref: CL:0005019 is_a: ZFA:0005599 ! ghrelin secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001249 ! exocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-17T01:02:01Z @@ -28001,8 +28004,8 @@ def: "A cell that secretes ghrelin, the peptide hormone that stimulates hunger." subset: cell_slim xref: CL:0005018 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-17T01:03:24Z @@ -28012,10 +28015,10 @@ name: sinoatrial region namespace: zebrafish_anatomy def: "Region at venious pole of heart tube that initiates heart beat." [ZFIN:ZDB-PUB-101115-23] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-22T04:14:44Z @@ -28026,10 +28029,10 @@ namespace: zebrafish_anatomy def: "Ring of cardiac conduction tissue around the sinoatrial region of the heart tube that performs pacemaker function." [ZFIN:ZDB-PUB-101115-23] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005600 ! sinoatrial region -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000114 ! heart relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2011-11-22T04:16:19Z @@ -28039,8 +28042,8 @@ name: supraneural 10 namespace: zebrafish_anatomy def: "Supraneural located posterior to supraneural 9. This supraneural does not appear in most specimens." [ZFIN:ZDB-PUB-031103-13] is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: jonknight creation_date: 2011-12-05T12:56:49Z @@ -28050,8 +28053,8 @@ name: lymphangiogenic sprout namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new lymph vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100719-62] is_a: ZFA:0005559 ! vascular sprouts -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-12-27T12:39:43Z @@ -28061,8 +28064,8 @@ name: angiogenic sprout namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new blood vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005559 ! vascular sprouts -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-12-27T12:41:09Z @@ -28074,8 +28077,8 @@ def: "The primordial vasculature that will develop into lymph vessels. The lymp synonym: "parachordal lymphangioblast string" EXACT [ZFIN:ZDB-PUB-110613-5] is_a: ZFA:0005076 ! primordial vasculature relationship: develops_from ZFA:0000477 ! posterior cardinal vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2011-12-27T12:45:30Z @@ -28089,9 +28092,9 @@ synonym: "calvaria" EXACT PLURAL [] synonym: "calvarium" EXACT [] synonym: "skullcap" RELATED [] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T12:33:01Z @@ -28103,9 +28106,9 @@ def: "Fibrous joint connecting the parietal bones." [GOC:cvs, ORCiD:0000-0002-22 synonym: "sagittal suture" RELATED [] xref: TAO:0005245 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T02:35:47Z @@ -28117,9 +28120,9 @@ def: "Fibrous joint connecting the frontal bone to the parietal bone. This join synonym: "coronal suture" RELATED [] xref: TAO:0005255 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T02:37:39Z @@ -28131,9 +28134,9 @@ def: "Fibrous joint connecting the supraoccipital to the parietal bone." [GOC:cv synonym: "lamdoid suture" RELATED [ZFIN:ZDB-PUB-060323-12] xref: TAO:0005264 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T02:48:16Z @@ -28143,8 +28146,8 @@ name: synostosis namespace: zebrafish_anatomy def: "Joint in which the articulating bones are connected by bone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:09:13Z @@ -28155,8 +28158,8 @@ namespace: zebrafish_anatomy def: "Synostosis where the entopterygoid meets the quadrate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "ectopterygoid-quadrate synostosis" EXACT [] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:28:11Z @@ -28167,8 +28170,8 @@ namespace: zebrafish_anatomy def: "Synostosis where the ectopterygoid meets the entopterygoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "ectopterygoid-entopterygoid synostosis" EXACT [] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:31:09Z @@ -28178,8 +28181,8 @@ name: basioccipital-prootic joint namespace: zebrafish_anatomy def: "Synchondrosis where the basioccipital meets the prootic anteriorly." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-31T03:48:07Z @@ -28190,8 +28193,8 @@ namespace: zebrafish_anatomy def: "Synostosis where the entopterygoid meets the metapterygoid. The metapterygoid has an anterodorsally projecting spine that meets the entopterygoid medially in a synostosis at its posteromedial edge." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "entopterygoid-metapterygoid synostosis" EXACT [] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:45:11Z @@ -28201,8 +28204,8 @@ name: metapterygoid-symplectic fenestra namespace: zebrafish_anatomy def: "Opening formed between the ventral border of the metapterygoid and the dorsal border of the symplectic." [ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:53:50Z @@ -28212,8 +28215,8 @@ name: quadrate-entopterygoid joint namespace: zebrafish_anatomy def: "Synchondrosis where the quadrate meets the entopterygoid dorsally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:57:23Z @@ -28223,8 +28226,8 @@ name: lateral ethmoid-supraethmoid namespace: zebrafish_anatomy def: "Synostosis where anteromedial extensions of the lateral ethmoid project to meet the supraethmoid dorsally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T11:27:00Z @@ -28234,8 +28237,8 @@ name: anguloarticular-retroarticular joint namespace: zebrafish_anatomy def: "Cartilaginous joint that articulates the anguloarticular posteroventrally with the retroarticular." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T11:51:45Z @@ -28246,9 +28249,9 @@ namespace: zebrafish_anatomy def: "Connective tissue that functions in mechanical and structural support." [VSAO:curator] xref: VSAO:0000015 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000434 ! skeletal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T03:59:26Z @@ -28259,8 +28262,8 @@ namespace: zebrafish_anatomy def: "A skeletal element that has the potential to participate in endochondral ossification, and may participate in intramembranous ossification." [VSAO:curator] xref: VSAO:0000139 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T02:36:59Z @@ -28271,8 +28274,8 @@ namespace: zebrafish_anatomy def: "Skeletal tissue with a collagen-rich extracellular matrix vascularized, mineralized with hydroxyapatite and typically including osteocytes located in lacunae that communicate with one another by cell processes (in canaliculi). Bone is deposited by osteoblasts." [VSAO:curator] xref: VSAO:0000047 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T04:00:34Z @@ -28283,8 +28286,8 @@ namespace: zebrafish_anatomy def: "Skeletal tissue that is avascular, rich in glycosaminoglycans (GAGs) and typically includes chondrocytes within isolated lacunae. Cartilage tissue is deposited by chondroblasts." [VSAO:curator] xref: VSAO:0000040 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T04:01:46Z @@ -28295,8 +28298,8 @@ namespace: zebrafish_anatomy def: "Skeletal tissue that is part of the exoskeleton and derived from an odontogenic papilla." [VSAO:curator] xref: VSAO:0000063 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T04:05:11Z @@ -28306,8 +28309,8 @@ name: replacement element namespace: zebrafish_anatomy def: "Skeletal element that forms as a replacement or substitution of another element or tissue." [TAO:curator] is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-14T12:37:44Z @@ -28319,8 +28322,8 @@ def: "Space enclosed by the trabeculae cranii. The anterior tip of the notochor synonym: "hypophyseal fenestrae" EXACT PLURAL [] xref: TAO:0005269 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2012-03-15T03:52:38Z @@ -28331,8 +28334,8 @@ namespace: zebrafish_anatomy def: "Synovial joint that articulates the hyomandibula and the opercle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0005265 is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:19:50Z @@ -28342,8 +28345,8 @@ name: hyomandibula-pterotic joint namespace: zebrafish_anatomy def: "Synovial joint that articulates the hyomandibula with the pterotic." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:14:40Z @@ -28355,8 +28358,8 @@ def: "Fossa where the exoccipital forms the medial portion and the epioccipital synonym: "temporal fossa" EXACT [] xref: TAO:0001753 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:23:27Z @@ -28370,8 +28373,8 @@ synonym: "facial nerve foramen" EXACT [ZFIN:ZDB-PUB-961014-192] synonym: "hyosymplectic foramen" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0005275 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:32:30Z @@ -28382,8 +28385,8 @@ namespace: zebrafish_anatomy def: "Fossa on the pterotic where the hyomandibula articulates." [ZFIN:ZDB-PUB-961014-192] xref: TAO:0005266 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:35:40Z @@ -28394,8 +28397,8 @@ namespace: zebrafish_anatomy def: "Fibrous joint that articulates the posterior edge of the preopercle horizontal limb with the symplectic." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0005268 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-20T05:02:00Z @@ -28406,8 +28409,8 @@ namespace: zebrafish_anatomy def: "Fibrous joint that articulates the anterior edge of the preopercle vertical limb and the hyomandibula." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0005278 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-20T05:04:12Z @@ -28417,10 +28420,10 @@ name: lepidotrichium segment namespace: zebrafish_anatomy def: "Skeletal element which is part of lepidotrichium articulating with other lepidotrichium segments by lepidotrichium joints." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005634 ! lepidotrichium joint relationship: part_of ZFA:0001554 ! lepidotrichium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-06T02:21:01Z @@ -28431,9 +28434,9 @@ namespace: zebrafish_anatomy def: "Joint that articulates segments of the fin ray." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-000803-4] synonym: "intra-ray joint" EXACT [] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001554 ! lepidotrichium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-06T02:22:29Z @@ -28445,8 +28448,8 @@ def: "Odontoid tissue formed of a loose matrix of collagen. The fibrils of the synonym: "pre-dentine" EXACT [] synonym: "predentin" EXACT [] is_a: ZFA:0005623 ! odontoid tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-19T02:42:59Z @@ -28456,9 +28459,9 @@ name: interossicular ligament namespace: zebrafish_anatomy def: "Ligament that connects the intercalarium to the anterior process of the tripus and the scaphium." [ZFIN:ZDB-PUB-031103-13, ZFIN:ZDB-PUB-120214-1] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-19T04:04:31Z @@ -28469,8 +28472,8 @@ namespace: zebrafish_anatomy def: "Ligament that connects one rib to another." [TAO:curator] xref: TAO:0001972 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-19T04:20:23Z @@ -28482,8 +28485,8 @@ def: "Ligaments that runs from the parapophyses of the anteriormost centrum to t synonym: "Baudelot's ligaments" EXACT [] synonym: "scapulo-vertebral ligaments" EXACT PLURAL [] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T12:23:51Z @@ -28494,8 +28497,8 @@ namespace: zebrafish_anatomy def: "Ligament that runs from the ventral third of the supracleithrum to the exoccipital." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "Baudelot's ligament" EXACT [] is_a: ZFA:0005638 ! scapulo-vertebral ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T12:25:49Z @@ -28506,8 +28509,8 @@ namespace: zebrafish_anatomy def: "Ligament that run from the dorsal tip of the cleithrum to the exoccipital." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "Baudelot's ligament" EXACT [] is_a: ZFA:0005638 ! scapulo-vertebral ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T12:26:31Z @@ -28517,8 +28520,8 @@ name: maxillo-mandibular ligament namespace: zebrafish_anatomy def: "Ligament that connects the dentary to the maxilla." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:00:12Z @@ -28528,8 +28531,8 @@ name: maxillo-rostroid ligament namespace: zebrafish_anatomy def: "Ligament that connects the rostral process of the maxilla to the kinethmoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:00:52Z @@ -28539,8 +28542,8 @@ name: premaxillo-rostroid ligament namespace: zebrafish_anatomy def: "Ligament that, in the adult, attaches the premaxilla to its counterpart at the midline and the kinethmoid posterodorsally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:03:14Z @@ -28550,8 +28553,8 @@ name: ceratobranchial 5 ligament namespace: zebrafish_anatomy def: "The ligament that connects the anteroventral tips of ceratobranchials 5 medially." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:03:58Z @@ -28561,8 +28564,8 @@ name: supracleithrum-intercalar ligament namespace: zebrafish_anatomy def: "Short ligament that runs from the hooked anterior end of the supracleithrum to the intercalar." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:04:45Z @@ -28572,8 +28575,8 @@ name: preopercle-retroarticular ligament namespace: zebrafish_anatomy def: "Ligament that connects the preopercle to the retroarticular anteroventrally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:05:19Z @@ -28584,8 +28587,8 @@ namespace: zebrafish_anatomy def: "Dense regular connective tissue that connects muscle to bone." [VSAO:curator] xref: VSAO:0000073 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T02:02:48Z @@ -28596,8 +28599,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the mesethmoid and lateral ethmoid. Mesethmoid-lateral ethmoid joint is paired." [TAO:curator, ZFIN:ZDB-PUB-961014-192] xref: TAO:0001679 is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T05:24:57Z @@ -28608,8 +28611,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the mesethmoid and vomer. Mesethmoid-vomer joint is unpaired." [TAO:curator] xref: TAO:0001680 is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T05:26:11Z @@ -28619,9 +28622,9 @@ name: primitive pectoral fin adductor namespace: zebrafish_anatomy def: "Adductor that originates at the cleithrum the muscle fibers run in sheets along the endoskeletal disk extending dorsally and caudally from its base. Distally, the muscles insert onto the fin membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050920-7] is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2012-05-08T03:51:06Z @@ -28631,8 +28634,8 @@ name: primitive pectoral fin abductor namespace: zebrafish_anatomy def: "Abductor that originates at the cleithrum the muscle fibers run in sheets along the endoskeletal disk extending dorsally and caudally from its base. Distally, the muscles insert onto the fin membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050920-7] is_a: ZFA:0005269 ! abductor muscle -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-05-08T03:59:41Z @@ -28643,8 +28646,8 @@ namespace: zebrafish_anatomy def: "Layers of broad flat tendons." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "aponeuroses" EXACT PLURAL [] is_a: ZFA:0005647 ! tendon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-06-15T10:41:21Z @@ -28655,9 +28658,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue in the vagal lobe that contains GABAergic sensory interneurons." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120409-2] is_a: ZFA:0000297 ! vagal lobe is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-07-03T01:25:32Z @@ -28667,9 +28670,9 @@ name: blood plasma namespace: zebrafish_anatomy def: "Portion of organism substance that is the liquid matrix of blood." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000007 ! blood -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-09-25T10:30:55Z @@ -28679,9 +28682,9 @@ name: anterior ventromedial process of autopalatine namespace: zebrafish_anatomy def: "Endochondral process of the autopalatine that forms the socket of the autopalatine-preethmoid joint." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001637 ! bony projection -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000620 ! autopalatine -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2012-09-25T03:42:27Z @@ -28691,8 +28694,8 @@ name: autopalatine-preethmoid joint namespace: zebrafish_anatomy def: "Synovial, ball and socket joint that articulates the autopalatine and the preethmoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-09-25T03:47:27Z @@ -28702,9 +28705,9 @@ name: anterior lateral process of autopalatine namespace: zebrafish_anatomy def: "Endochondral bone part of autopalatine that extends towards the first infraorbital." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001637 ! bony projection -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000620 ! autopalatine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-09-25T03:55:15Z @@ -28714,9 +28717,9 @@ name: lymph namespace: zebrafish_anatomy def: "Portion of organism substance found in the lymphatic system. Lymph usually consists of interstitial fluid that has made its way into the lymphatic system." [GOC:cvs, ORCiD:0000-0002-2244-7917, UBERON:curator] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000385 ! lymphatic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-11-28T03:32:48Z @@ -28726,9 +28729,9 @@ name: intestinal lamina propria mucosa namespace: zebrafish_anatomy def: "Thin layer of loose connective tissue which lies beneath the intestinal epithelium. The intestinal lamina propria is less complex then the corresponding mammalian tissue." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050120-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005660 ! intestinal mucosa -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-07T12:15:28Z @@ -28738,9 +28741,9 @@ name: intestinal mucosa namespace: zebrafish_anatomy def: "Multi-tissue structure of the intestine comprising of the intestinal epithelium and the intestinal lamina propria mucosa." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050120-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-07T12:18:22Z @@ -28751,9 +28754,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the olfactory bulb that is roughly spheroidal and encircled by olfactory sensory neuron axons that formed an anatomically distinct stalk connected to the olfactory nerve." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-03-19T02:15:11Z @@ -28763,9 +28766,9 @@ name: spinal nerve namespace: zebrafish_anatomy def: "Bilaterally-paired nerve connecting each segment of the spinal cord to the limbs and organs." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:04:36Z @@ -28776,8 +28779,8 @@ namespace: zebrafish_anatomy def: "Dorsal branch of the spinal nerve, coursing dorsally and caudally between the muscle and the vertebrae. It remains in the center of the muscle segment and could be followed to the dorsal aspect of the muscle. MiP primary motoneuron axons extend in this branch." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] synonym: "dorsal nerve" EXACT [] is_a: ZFA:0005662 ! spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:08:16Z @@ -28788,8 +28791,8 @@ namespace: zebrafish_anatomy def: "Ventral branch of the spinal nerve that projects toward the lateral surface of the myotome, initially extending parallel to the horizontal myoseptum. RoP primary motoneuron axons extend in this branch." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] synonym: "lateral nerve" EXACT [] is_a: ZFA:0005662 ! spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:09:27Z @@ -28800,8 +28803,8 @@ namespace: zebrafish_anatomy def: "Ventral spinal nerve branch that projects to the ventral myotome. The axon of the CaP primary motoneuron extends in this branch." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247] synonym: "ventral nerve" EXACT [] is_a: ZFA:0005662 ! spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:11:19Z @@ -28811,8 +28814,8 @@ name: ventral spinal nerve septal branch namespace: zebrafish_anatomy def: "Ventral spinal nerve sub-branch that runs near the rostral end of the myotome near the vertical myoseptum." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247] is_a: ZFA:0005665 ! ventral spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:13:53Z @@ -28822,8 +28825,8 @@ name: ventral spinal nerve median branch namespace: zebrafish_anatomy def: "Ventral spinal nerve sub-branch that projects ventrally in the rostro-caudal center of the myotome. The axon of the CaP primary motoneuron extends in this branch." [ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] is_a: ZFA:0005665 ! ventral spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:14:46Z @@ -28834,9 +28837,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the olfactory bulb comprised of ciliated and microvillous olfactory sensory neurons projections that form specialized neuropilar regions comprised of olfactory sensor axons and the dendrites of olfactory bulb neurons." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120330-2] synonym: "glomerular precursors" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T11:55:43Z @@ -28847,9 +28850,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. The neurons composing lateral protoglomeruli respond to amino acid stimuli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "lateral protoglomeruli" EXACT PLURAL [] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T01:58:36Z @@ -28859,9 +28862,9 @@ name: central zone protoglomerulus namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:06:50Z @@ -28871,9 +28874,9 @@ name: medial protoglomerulus namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Mediates the signals produced in response to bile acids." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:10:49Z @@ -28884,8 +28887,8 @@ namespace: zebrafish_anatomy def: "Single large glomerulus located in the ventral posterior region of the maturing glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "VPG" RELATED [] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:17:00Z @@ -28895,9 +28898,9 @@ name: central zone olfactory bulb namespace: zebrafish_anatomy def: "Central region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:25:20Z @@ -28907,9 +28910,9 @@ name: dorsal zone olfactory bulb namespace: zebrafish_anatomy def: "Dorsal region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:26:28Z @@ -28919,9 +28922,9 @@ name: lateral zone olfactory bulb namespace: zebrafish_anatomy def: "Lateral region of the glomerular layer of the olfactory bulb. The lateral region of the olfactory bulb consisted of morphologically diverse glomeruli and a diffuse aggregate of OSN axons, the lateral plexus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:27:13Z @@ -28931,9 +28934,9 @@ name: medial zone olfactory bulb namespace: zebrafish_anatomy def: "Medial region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:28:47Z @@ -28943,9 +28946,9 @@ name: ventral zone olfactory bulb namespace: zebrafish_anatomy def: "Ventral region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:29:39Z @@ -28955,9 +28958,9 @@ name: dorsolateral zone olfactory bulb namespace: zebrafish_anatomy def: "Lateral region of the dorsal zone of the olfactory bulb. Glomeruli in this zone are tightly clustered in both male and female fish." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050523-2, ZFIN:ZDB-PUB-101222-42, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005674 ! dorsal zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-06T04:46:27Z @@ -28967,9 +28970,9 @@ name: ventromedial zone olfactory bulb namespace: zebrafish_anatomy def: "Medial portion of the ventral region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005677 ! ventral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T09:59:45Z @@ -28980,9 +28983,9 @@ namespace: zebrafish_anatomy def: "Anterior portion of the ventral region of the glomerular layer of the olfactory bulb. In the ventroanterior zone there are typically seven small glomeruli located 11-20 micrometers beneath the superficial axon bundles The ganglion differed conspicuously in sizes, shapes, and distribution, and were not individually identifiable." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "vaGx" RELATED [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005677 ! ventral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T10:03:15Z @@ -28992,9 +28995,9 @@ name: ventroposterior zone olfactory bulb namespace: zebrafish_anatomy def: "Posterior portion of the ventral region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005677 ! ventral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T10:22:38Z @@ -29004,9 +29007,9 @@ name: mediodorsal zone of the olfactory bulb namespace: zebrafish_anatomy def: "Dorsal part of the medial region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T01:37:59Z @@ -29017,9 +29020,9 @@ namespace: zebrafish_anatomy def: "Anterior portion of the medial region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "medial anterior zone olfactory bulb" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T01:39:48Z @@ -29030,9 +29033,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located between ventromedial and medial olfactory bulb surfaces. The mpG is generally elongated and innervated by a single thick axon." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050523-2, ZFIN:ZDB-PUB-961014-62] synonym: "mpG" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T01:48:45Z @@ -29043,9 +29046,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsal zone of the olfactory bulb. It is located in a stereotypic position near the posterior edge of the dorsal glomerular zone and stains with anti-calretinin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsal glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005674 ! dorsal zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:25:26Z @@ -29056,9 +29059,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Dorsalmost of glomeruli located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:34:12Z @@ -29069,9 +29072,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG1 and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:38:24Z @@ -29082,9 +29085,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG2 and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:40:59Z @@ -29095,9 +29098,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG3 and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 4" RELATED [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:42:35Z @@ -29108,9 +29111,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG4, and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 5" RELATED [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:45:36Z @@ -29122,9 +29125,9 @@ def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Stains synonym: "ventral triplet glomerulus 1" EXACT [] synonym: "ventromedial glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:10:31Z @@ -29136,9 +29139,9 @@ def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Stains synonym: "ventral triplet glomerulus 2" EXACT [] synonym: "ventromedial glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:17:25Z @@ -29150,9 +29153,9 @@ def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Stains synonym: "ventral triplet glomerulus 3" EXACT [] synonym: "ventromedial glomerulus 3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:19:23Z @@ -29163,9 +29166,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Posterior to the triplet of ventromedial glomeruli strongly expressing calretinin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 4" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:24:43Z @@ -29176,9 +29179,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Posterior to vmG4." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 5" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:26:20Z @@ -29189,9 +29192,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Posterior to vmG4 adjacent to vmG5." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 6" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:27:26Z @@ -29202,9 +29205,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. vmG7 is located anteriorly to vmG1-3 and vmG4-6." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 7" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:31:32Z @@ -29215,9 +29218,9 @@ namespace: zebrafish_anatomy def: "Group of glomerulus located in the ventromedial zone of the olfactory bulb The vmGx group, is located 10-50 micrometers from the ventral surface of the olfactory bulb. And were located anywhere between the posteroventral and anteroventral regions of the olfactory bulb. It was not possible to unambiguously identify the vmGx because they displayed varying distributions and numbers in the olfactory bulbs of different animals." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerular group x" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:34:17Z @@ -29228,9 +29231,9 @@ namespace: zebrafish_anatomy def: "Group of glomerulus located in the ventromedial zone of the olfactory bulb. A cluster of comparatively small glomeruli located near the midline between the two olfactory bulbs The glomeruli in the vmGy were among the smallest glomeruli in the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerular group y" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:37:11Z @@ -29241,9 +29244,9 @@ namespace: zebrafish_anatomy def: "One of two large glomeruli located in the medial side of the ventroposterior zone olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventroposterior glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005681 ! ventroposterior zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:46:05Z @@ -29254,9 +29257,9 @@ namespace: zebrafish_anatomy def: "One of two large glomeruli located in the lateral side of the ventroposterior zone olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventroposterior glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005681 ! ventroposterior zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:47:52Z @@ -29268,9 +29271,9 @@ def: "Glomerulus located in the lateral zone of the olfactory bulb. LG1 is surro synonym: "glomerulus 1 of the lateral chain" EXACT [] synonym: "lateral glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T04:11:01Z @@ -29283,9 +29286,9 @@ synonym: "glomerulus 2 of the lateral chain" EXACT [] synonym: "lateral glomerulus 2" EXACT [] synonym: "lcG2 " EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T04:15:43Z @@ -29298,9 +29301,9 @@ synonym: "glomerulus 3 of the lateral chain" EXACT [] synonym: "lateral glomerulus 3" EXACT [] synonym: "lcG3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T04:18:03Z @@ -29313,9 +29316,9 @@ synonym: "glomerulus 4 of the lateral chain" EXACT [] synonym: "lateral glomerulus 4" EXACT [] synonym: "lcG4" RELATED [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:07:13Z @@ -29328,9 +29331,9 @@ synonym: "glomerulus 5 of the lateral chain" EXACT [] synonym: "lateral glomerulus 5" RELATED [] synonym: "lcG5 " EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:11:41Z @@ -29340,9 +29343,9 @@ name: lGx namespace: zebrafish_anatomy def: "Group of glomerulus located in the lateral region of the olfactory bulb. The glomeruli that compose lGx are smaller than the lG1-6 and varied in shape, sizes, and locations between olfactory bulbs of the same and different animals. The lGx were located either along the ventral edge of the lateral group or below the lateral olfactory bulb surface." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:16:21Z @@ -29354,9 +29357,9 @@ def: "Glomerulus located in the lateral zone of the olfactory bulb. LG6 is locat synonym: "lateral glomerulus 6" EXACT [] synonym: "lvpG" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:19:31Z @@ -29369,9 +29372,9 @@ synonym: "mdpG1" EXACT [] synonym: "mediodorsal glomerulus 1" EXACT [] synonym: "mediodorsal posterior glomerulus 1 " EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:49:49Z @@ -29384,9 +29387,9 @@ synonym: "mdpG2 " EXACT [] synonym: "mediodorsal glomerulus 2" EXACT [] synonym: "mediodorsal posterior glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:53:33Z @@ -29397,9 +29400,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. Glomerulus that lies ventral to mdG2 on the caudal edge of the mediodorsal glomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:54:46Z @@ -29410,9 +29413,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. Positioned between mdG2 and mdG5 on the dorsal edge of the medial dorsal glomerular cluster." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 4" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:56:36Z @@ -29423,9 +29426,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. . This glomerulus expresses a protein that cross reacts with antibodies raised against GNAO1. It is the dorsal to mdG6 on the rostral edge of the mediodorsal cluster." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 5" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:57:20Z @@ -29436,9 +29439,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. This glomerulus is the most ventral glomerulus in the mediodorsal cluster." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 6" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:58:01Z @@ -29450,9 +29453,9 @@ def: "Glomerulus located in the anteromedial zone of the olfactory bulb." [GOC: synonym: "maG" RELATED [] synonym: "medial anterior glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005683 ! anteromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T12:02:52Z @@ -29463,9 +29466,9 @@ namespace: zebrafish_anatomy def: "Group of small glomeruli located in the anteromedial zone of the olfactory bulb. The arrangements of glomeruli maGx varies between animals and they can't be identified as individual units." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "medial anterior glomeruli " RELATED [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005683 ! anteromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T12:04:40Z @@ -29476,9 +29479,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Dorsolateral protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG1" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T03:52:20Z @@ -29489,9 +29492,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Ventromedial protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG2" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:06:52Z @@ -29502,9 +29505,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Dorsomedial protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG3" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:08:18Z @@ -29515,9 +29518,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Ventrolateral protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG4" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:08:37Z @@ -29528,9 +29531,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Most lateral protoglomerulus in the central zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ1" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:13:36Z @@ -29541,9 +29544,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 1." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ2" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:20:35Z @@ -29554,9 +29557,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 2." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ3" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:21:01Z @@ -29567,9 +29570,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 3." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ4" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:35:43Z @@ -29580,9 +29583,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Most medial protoglomerulus in the central zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ5" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:36:02Z @@ -29593,9 +29596,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most posterio-lateral of the medial protoglomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG1 " RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:39:34Z @@ -29606,9 +29609,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most dorsally located medial protoglomerulus and medial to protoglomerulus 1." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG2" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:18Z @@ -29619,9 +29622,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Located between medial glomerulus 2 and medial glomerulus 4 along dorsal-ventral axis of the medial region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG3" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:38Z @@ -29632,9 +29635,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most ventral of the medial protoglomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG4" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:57Z @@ -29647,9 +29650,9 @@ subset: cell_slim synonym: "cranial motoneuron" EXACT [] xref: CL:0015000 is_a: ZFA:0009052 ! motor neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:04:57Z @@ -29663,8 +29666,8 @@ synonym: "branchi motor neuron" EXACT [] synonym: "special visceral motor neuron" EXACT [] xref: CL:0005023 is_a: ZFA:0005730 ! cranial motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:06:26Z @@ -29677,9 +29680,9 @@ subset: cell_slim synonym: "general visceral motor neuron" EXACT [] xref: CL:0005025 is_a: ZFA:0005730 ! cranial motor neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:08:10Z @@ -29691,10 +29694,10 @@ def: "Cranial motor neurons found in the midbrain and hindbrain that innervates subset: cell_slim xref: CL:0005024 is_a: ZFA:0005730 ! cranial motor neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:09:35Z @@ -29704,10 +29707,10 @@ name: lacunocanalicular system namespace: zebrafish_anatomy def: "A system of osteocytes connected through canals within the vertebra. Osteocytes extend processes through canals within ossified bone. The lacunocanalicular system is poorly developed in zebrafish with most osteocytes having one or two cytoplasmic processes." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-22629-14] is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001189 ! vertebra relationship: part_of ZFA:0005621 ! bone tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T11:48:50Z @@ -29717,9 +29720,9 @@ name: lacunocanalicular canal namespace: zebrafish_anatomy def: "Anatomical space, part of the lacunocanalicular system that connects lacuna within bone tissue allowing osteocyte projections to connect." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-11518-14] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T12:10:17Z @@ -29729,9 +29732,9 @@ name: lacuna namespace: zebrafish_anatomy def: "Anatomical space a small cavity, in the matrix of bone tissue. Part of the lacunocanalicular system." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T12:19:22Z @@ -29744,8 +29747,8 @@ synonym: "endodermal rod" RELATED [ZFIN:ZDB-PUB-030115-26] synonym: "intestinal anlage" RELATED [ZFIN:ZDB-PUB-050120-6.] is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Ceri creation_date: 2013-07-23T03:03:23Z @@ -29756,8 +29759,8 @@ namespace: zebrafish_anatomy def: "Portion of the intestinal rod that loops to left between 26-30hpf and gives rise to the intestinal bulb and liver and anterior pancreatic primordium. The endoderm at this stage is a compact mass of cells with little to no polarization." [ZFIN:ZDB-PUB-031103-19] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-07-23T03:06:11Z @@ -29769,9 +29772,9 @@ def: "A secretory cell found in pancreatic acini that secretes digestive enzymes subset: cell_slim xref: CL:0002064 is_a: ZFA:0009277 ! acinar cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005741 ! pancreatic acinar gland -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:13:45Z @@ -29784,9 +29787,9 @@ subset: cell_slim synonym: "CAC" EXACT [ZFIN:ZDB-PUB-050623-3] xref: CL:0002080 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005741 ! pancreatic acinar gland -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:16:32Z @@ -29798,9 +29801,9 @@ def: "Portion of exocrine pancreas that is comprised of polarized cells containi synonym: "exocrine glands pancreas" EXACT [] synonym: "pancreatic acini" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:42:33Z @@ -29816,9 +29819,9 @@ synonym: "PP cell of pancreatic islet" EXACT [] synonym: "PP-cell of pancreatic islet" EXACT [] xref: CL:0002275 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001260 ! endocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-29T10:59:29Z @@ -29834,9 +29837,9 @@ synonym: "pancreatic delta cell" EXACT [] synonym: "somatostatin-secreting pancreatic cell" EXACT [] xref: CL:0000173 is_a: ZFA:0009228 ! D cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001260 ! endocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-29T11:03:15Z @@ -29849,9 +29852,9 @@ subset: cell_slim synonym: "notochord sheath cell" RELATED [] xref: CL:0007007 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2013-07-30T04:09:49Z @@ -29863,8 +29866,8 @@ def: "A cell whose primary function is to provide structural support, to provide subset: cell_slim xref: CL:0000293 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-30T04:14:44Z @@ -29876,9 +29879,9 @@ def: "Structural cell of notochord that contain one large fluid-filled intracell subset: cell_slim synonym: "chordocytes" EXACT [] is_a: ZFA:0005745 ! structural cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2013-07-30T04:15:56Z @@ -29889,9 +29892,9 @@ namespace: zebrafish_anatomy def: "Lymph vessels that are located on either side of the PCV in the posterior region of the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "SIL" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005840 ! intestinal lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2013-07-31T10:44:16Z @@ -29901,10 +29904,10 @@ name: intrapancreatic duct namespace: zebrafish_anatomy def: "Digestive duct within the pancreas. The pancreatic duct carries inactive digestive enzymes to the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3, ZFIN:ZDB-PUB-101201-32] is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000140 ! pancreas relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-08-01T02:17:49Z @@ -29914,8 +29917,8 @@ name: intercalated duct pancreas namespace: zebrafish_anatomy def: "The portion of the intrapancreatic duct leading from the pancreatic acinar gland to the intralobular duct." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:44:27Z @@ -29925,9 +29928,9 @@ name: pancreatic intralobular duct namespace: zebrafish_anatomy def: "Intrapancreatic duct within a pancreatic lobe that connects all the intercalated duct with an interlobular duct. The intralobular duct is lined with cuboidal cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:50:38Z @@ -29937,8 +29940,8 @@ name: pancreatic interlobular duct namespace: zebrafish_anatomy def: "Intrapancreatic duct that connects the intralobular duct to the main pancreatic duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T02:53:52Z @@ -29948,8 +29951,8 @@ name: main intrapancreatic duct namespace: zebrafish_anatomy def: "Intrapancreatic duct that connects to the interlobular ducts and drains into the extrapancreatic duct. The main duct may not be present in all larva and may develop in a segmented fashion." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3, ZFIN:ZDB-PUB-070310-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:55:07Z @@ -29961,9 +29964,9 @@ def: "Cluster of acinar glands surrounding an intralobular duct." [GOC:cvs, ORCi comment: Lobules are composed of multiple acini so are only apparent starting ~72hpf. Before 72hpf consider annotating to acinar gland. synonym: "exocrine lobule" EXACT [ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001249 ! exocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T03:16:34Z @@ -29974,8 +29977,8 @@ namespace: zebrafish_anatomy def: "The primary islet is the first islet to develop." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "principal islet" EXACT [] is_a: ZFA:0005755 ! islet -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T04:05:06Z @@ -29985,9 +29988,9 @@ name: islet namespace: zebrafish_anatomy def: "Portion of tissue composed of a group of cells in the pancreas producing insulin, glucagon and somatostatin. Part of the endocrine pancreas." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001260 ! endocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T04:10:28Z @@ -29998,8 +30001,8 @@ namespace: zebrafish_anatomy def: "Islets that develop after the primary islet. The secondary islets usually form around 7 dpf but can be induced to form as early as 5 dpf." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130710-45, ZFIN:ZDB-PUB-140817-2] comment: Start stage known to be after 3dpf. is_a: ZFA:0005755 ! islet -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2013-08-01T04:10:55Z @@ -30011,9 +30014,9 @@ def: "Portion of tissue composed of the signal-generating cells within the zona synonym: "MDO" EXACT [] synonym: "mid-diencephalic organizer" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001344 ! zona limitans intrathalamica -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-08-02T03:20:09Z @@ -30024,9 +30027,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue interspersed within the pancreatic acini." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2013-09-23T10:03:51Z @@ -30038,9 +30041,9 @@ def: "Adipose tissue on the surface of the organs within the pleuroperitoneal ca comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. synonym: "visceral fat deposit" RELATED [] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2013-09-23T10:23:07Z @@ -30051,9 +30054,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue in the cranium. Cranial adipocytes are located within the ventral wall of the cranium, situated between the brain and the esophagus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T10:26:44Z @@ -30064,9 +30067,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue surrounding the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917] comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005760 ! cranial fat -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001410 ! orbital region -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T10:59:00Z @@ -30076,8 +30079,8 @@ name: subcutaneous fat namespace: zebrafish_anatomy def: "Adipose tissue between muscle and integument." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111012-7] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T11:20:54Z @@ -30087,9 +30090,9 @@ name: esophageal fat namespace: zebrafish_anatomy def: "Adipose tissue surrounding the esophagus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:32:46Z @@ -30100,9 +30103,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue deposited along the mandible." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] synonym: "jaw fat deposit" EXACT [] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:33:07Z @@ -30113,9 +30116,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue surrounding the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090417-9] synonym: "pericardial fat deposit" EXACT [] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000054 ! pericardium -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:41:21Z @@ -30126,9 +30129,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue that forms at the base of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090417-9] synonym: "pectoral fin plate deposit" EXACT [] is_a: ZFA:0005762 ! subcutaneous fat -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:42:40Z @@ -30139,9 +30142,9 @@ namespace: zebrafish_anatomy def: "Subcutaneous adipose tissue deposit at the base of the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] synonym: "tail fin fat" EXACT [] is_a: ZFA:0005762 ! subcutaneous fat -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T12:46:21Z @@ -30150,9 +30153,10 @@ id: ZFA:0005768 name: trigeminal sensory neuron namespace: zebrafish_anatomy def: "Sensory neuron that extends a single axon shaft along the lateral white matter of the hindbrain and spinal cord. Numerous medially projecting branches are later formed and innervate a series of target nuclei along the anteroposterior axis of the hindbrain and spinal cord. The highly branched axons innervate the integument of the head. There are several subtypes with different afferent branching morphologies." [ZFIN:ZDB-PUB-120106-15] +subset: cell_slim is_a: ZFA:0009053 ! sensory neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2013-09-30T03:31:51Z @@ -30165,9 +30169,9 @@ subset: cell_slim xref: CL:0000018 is_a: ZFA:0009016 ! germ line cell relationship: develops_from ZFA:0009005 ! spermatocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2013-10-04T03:51:27Z @@ -30176,9 +30180,10 @@ id: ZFA:0005770 name: crypt neuron olfactory support cell namespace: zebrafish_anatomy def: "Specialized olfactory support cell that surrounds crypt olfactory sensory neurons. There are one or two support cells for each crypt neuron. The cytoplasm of crypt neuron olfactory support cells is less electron dense then other support cells. They also bear numerous microvilli at their apical rim. When two supporting cells are present, they interdigitate with each other Mitochondria in crypt supporting cells are larger than those in the common supporting cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060724-7] +subset: cell_slim is_a: ZFA:0000688 ! olfactory support cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-11-05T11:05:25Z @@ -30189,8 +30194,8 @@ namespace: zebrafish_anatomy def: "Portion of tissue that develops from the cranial neural crest and which cells populate a series of pharyngeal arches from which develops the support skeleton of the jaw and gills." [ZFIN:ZDB-PUB-110609-14, ZFIN:ZDB-PUB-120517-11] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007087 ! migratory cranial neural crest -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Ceri creation_date: 2013-11-25T12:11:28Z @@ -30202,8 +30207,8 @@ def: "Diploid cell produced by the fusion of sperm cell nucleus and egg cell." [ synonym: "zygote " EXACT [] xref: CL:00000365 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000001 ! Zygote:1-cell -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000001 ! zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell created_by: Ceri creation_date: 2013-11-25T01:46:49Z @@ -30212,10 +30217,11 @@ id: ZFA:0005773 name: embryonic blood vessel endothelial progenitor cell namespace: zebrafish_anatomy def: "An endothelial progenitor cell that participates in angiogenesis during development." [GOC:tjm] +subset: cell_slim xref: CL:0002546 is_a: ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2013-12-02T02:57:49Z @@ -30225,9 +30231,9 @@ name: atrial epicardium namespace: zebrafish_anatomy def: "The external layer of the atrium bounding the atrial myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100112-31] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005057 ! epicardium -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2013-11-26T04:32:55Z @@ -30236,11 +30242,12 @@ id: ZFA:0005775 name: enteric neuron namespace: zebrafish_anatomy def: "Neuron that is part of the enteric nervous system." [CL:MAH] +subset: cell_slim xref: CL:0007011 is_a: ZFA:0009059 ! autonomic neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001155 ! enteric nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T12:36:50Z @@ -30249,11 +30256,12 @@ id: ZFA:0005776 name: parasympathetic neuron namespace: zebrafish_anatomy def: "Parasympathetic neurons are part of the parasympathetic nervous system and the cell bodies lie in the brain and sacral region of the spinal cord. The neurons are mainly cholinergic." [ISBN:0080923437] +subset: cell_slim xref: CL:0011102 is_a: ZFA:0009059 ! autonomic neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001575 ! parasympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T12:39:37Z @@ -30262,11 +30270,12 @@ id: ZFA:0005777 name: sympathetic neuron namespace: zebrafish_anatomy def: "Sympathetic neurons are part of the sympathetic nervous system and are primarily adrenergic producing the neurotransmitter noradrenalin along with other neuropeptides." [ISBN:0080923437] +subset: cell_slim xref: CL:0011103 is_a: ZFA:0009059 ! autonomic neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T12:42:24Z @@ -30275,11 +30284,12 @@ id: ZFA:0005778 name: hypocretin-secreting neuron namespace: zebrafish_anatomy def: "A neuron that releases hypocretin as a neurotransmitter." [PMID:23848055] +subset: cell_slim synonym: "orexin secreting neuron " RELATED [] xref: CL:0011109 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T01:14:29Z @@ -30289,9 +30299,9 @@ name: thymic epithelium namespace: zebrafish_anatomy def: "Epithelium within the thymus where lymphocytes mature. Cells of the thymic epithelium have cytoplasm that appear devoid of most membrane bound organelles but contain bundles of cytoplasmic filaments, and frequent desmosomes occur between these epithelial cells. There are also secretory epithelial cells that contain a heterogeneous population of electron-dense, cytoplasmic granules and a well developed Golgi complex. Epithelial cysts are present after 3 weeks." [ZFIN:ZDB-PUB-990414-60] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001078 ! thymus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-03-11T03:25:06Z @@ -30301,9 +30311,9 @@ name: immature thymic epithelium namespace: zebrafish_anatomy def: "Epithelium of the thymus primordium composed of cells of immature morphology. The immature thymic epithelium is continuous with the pharyngeal epithelium. The immature thymic epithelium is composed of electron-lucent epithelial cells of irregular or polygonal shape and contain numerous ribosomes, large electron-lucent mitochondria, and rough endoplasmic reticulum. Nascent desmosomes join these primitive epithelial cells together." [ZFIN:ZDB-PUB-990414-60] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001077 ! thymus primordium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2014-03-11T03:28:25Z @@ -30313,9 +30323,9 @@ name: cloaca namespace: zebrafish_anatomy def: "Part of the gut where the pronephric tubules come together with the caudal end of the intestine attaching at 4dpf. The oviduct or sperm duct connect later." [ZFIN:ZDB-PUB-060508-11] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2014-03-12T09:34:37Z @@ -30326,9 +30336,9 @@ namespace: zebrafish_anatomy def: "The juncture where the intestine empties into the cloaca." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "gut opening" EXACT [] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000330 ! cloacal chamber -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-12T09:39:01Z @@ -30338,10 +30348,10 @@ name: cloacal epithelium namespace: zebrafish_anatomy def: "Epithelium lining the cloaca. The epithelium is a simple cuboidal epithelium at Prim-5." [ZFIN:ZDB-PUB-000505-17] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005123 ! gut epithelium relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2014-03-12T10:18:40Z @@ -30350,10 +30360,11 @@ id: ZFA:0005784 name: striated muscle cell namespace: zebrafish_anatomy def: "Muscle cell which has as its direct parts myofilaments organized into sarcomeres." [GOC:tfm, ISBN:0721662544] +subset: cell_slim xref: CL:0000737 is_a: ZFA:0009114 ! muscle cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-18T03:14:29Z @@ -30364,13 +30375,13 @@ namespace: zebrafish_anatomy def: "Striated muscle of the esophagus. Permits voluntary swallowing." [ZFIN:ZDB-PUB-130709-61] synonym: "oesophageal striated muscle (OSM)" EXACT [ZFIN:ZDB-PUB-130709-61] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0000072 ! somite 1 relationship: has_developmental_contribution_from ZFA:0000728 ! somite 2 relationship: has_developmental_contribution_from ZFA:0000732 ! somite 3 relationship: has_developmental_contribution_from ZFA:0005923 ! anterior migratory muscle precursor stream relationship: part_of ZFA:0000204 ! esophagus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-03-18T03:37:56Z @@ -30379,10 +30390,11 @@ id: ZFA:0005786 name: cleft cell namespace: zebrafish_anatomy def: "Wedge-shaped epidermal cell positioned along the apex of the developing fin fold. Each cleft cell retains a wedge-shaped form during fold formation and develops a basal cleft-shaped invagination. Invaginations are aligned in neighboring cleft cells so that these cells cap the distal boundary of the subepidermal space where collagenous extracellular fibres called actinotrichia run anteroposteriorly along the length of the fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-195] +subset: cell_slim is_a: ZFA:0009183 ! epidermal cell -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2014-03-25T09:31:29Z @@ -30392,9 +30404,9 @@ name: hypophyseal artery namespace: zebrafish_anatomy def: "Artery that runs along the midline from anterior to posterior regions of the hypothalamus and splits into two capillary branches (hyc). The formation of the artery is initiated at the hypophysis itself and extends anteriorly until it connects with the palatocerebral arteries at day 2.5." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111027-47, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T10:42:12Z @@ -30404,9 +30416,9 @@ name: hypophyseal vein namespace: zebrafish_anatomy def: "Vein thats tarts posterior of the hypophysis and drains the hypophyseal capillaries. It empties into the primary head sinus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T10:47:03Z @@ -30417,8 +30429,8 @@ namespace: zebrafish_anatomy def: "Axon tract originating from the two hemispheres of the neurosecretory preoptic areas converging into the midline and terminating at the ventral part of the hypothalamus at the presumed location of the pituitary. Analogous to the supraopticohypophyseal tract in mammals." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111027-47] synonym: "preopticohypophyseal axon tract" EXACT [] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-04-03T11:19:03Z @@ -30428,9 +30440,9 @@ name: hypophyseal capillary namespace: zebrafish_anatomy def: "Pair of capillaries that bilaterally encompass the hypophysis starting at the anterior aspect of the hypophysis (pituitary). Directly posterior to the pituitary, the two capillaries fuse with the hypophyseal vein." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T11:27:53Z @@ -30440,9 +30452,9 @@ name: breeding tubercle namespace: zebrafish_anatomy def: "Surface structure that is a keratinized epidermal appendages that is a contact organ and secondary sex organ." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-05-15T03:26:12Z @@ -30453,8 +30465,8 @@ namespace: zebrafish_anatomy def: "Surface structure that is a protrusion from the rostral end of the jaw, supported by the mandibular projection." [ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] synonym: "lateral projections lower jaw" EXACT [] is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:10:53Z @@ -30464,9 +30476,9 @@ name: superficial layer of breeding tubercle namespace: zebrafish_anatomy def: "Layer of smooth cells composing the outer layer of the breeding tubercle. Cells in this layer have a high keratin content, lamellar bodies, and condensed chromosomes. This layer is repeatedly shed and regenerated." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:33:07Z @@ -30476,9 +30488,9 @@ name: second tier layer of breeding tubercle namespace: zebrafish_anatomy def: "Cell layer that lies underneath the superficial layer of the breeding tubercle. Characterized by tight junctions within the layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:46:01Z @@ -30489,9 +30501,9 @@ namespace: zebrafish_anatomy def: "Intermediate layer of the breeding tubercles characterized by cells with loose spinous organization connected to each other via desmosomes, but with wide extracellular spaces in between." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] synonym: "spinous keratinocyte layer" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:46:51Z @@ -30501,9 +30513,9 @@ name: basal layer breeding tubercle namespace: zebrafish_anatomy def: "Layer of breeding tubercle proximal to basal lamina of the integument." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:48:25Z @@ -30513,10 +30525,10 @@ name: pectoral fin breeding tubercle namespace: zebrafish_anatomy def: "Breeding tubercles along the surface of the pectoral fin lepidotrichium of males." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0005791 ! breeding tubercle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000242 ! male organism relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-04T02:50:54Z @@ -30526,8 +30538,8 @@ name: jaw row breeding tubercle namespace: zebrafish_anatomy def: "Surface structures composed of breeding tubercles arranged in a double row in the medial region on each side of the lower jaw." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0005791 ! breeding tubercle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:56:48Z @@ -30537,8 +30549,8 @@ name: jaw flap breeding tubercle namespace: zebrafish_anatomy def: "Breeding tubercles that cover the surface of the jaw flap." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0005791 ! breeding tubercle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T03:32:28Z @@ -30548,9 +30560,9 @@ name: extracellular lipid lamellae namespace: zebrafish_anatomy def: "Portion of organism substance that is located between the cap and second tier layers of the breeding tubercles. The lipid lamellae is composed of lipids." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T04:00:53Z @@ -30562,9 +30574,9 @@ def: "The interrenal vessel (IRV) is the blood vessels supplying the interrenal synonym: "IRV" EXACT [] is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0005802 ! interrenal angiogenic sprout -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001345 ! interrenal gland -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-06-06T01:45:08Z @@ -30574,9 +30586,9 @@ name: interrenal angiogenic sprout namespace: zebrafish_anatomy def: "Sprout from the dorsal aorta that develops into the interrenal vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120905-5] is_a: ZFA:0005604 ! angiogenic sprout -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001346 ! interrenal primordium -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2014-06-10T10:26:33Z @@ -30586,9 +30598,9 @@ name: cupula namespace: zebrafish_anatomy def: "Gelatinous substance surrounding the kinocila of the neuromast." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-768] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T09:55:56Z @@ -30600,10 +30612,10 @@ def: "Efferent neuron where the cell body is located in the hindbrain reticular subset: cell_slim synonym: "RELL neuron" EXACT [] is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T10:08:34Z @@ -30615,9 +30627,9 @@ def: "Efferent neuron located in the hindbrain. The axon of ROLE cells travels subset: cell_slim synonym: "ROLE neuron" EXACT [] is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T10:42:22Z @@ -30630,10 +30642,10 @@ comment: There may be 2 neuron types grouped under this name since there are som subset: cell_slim synonym: "DELL neuron" EXACT [] is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T11:50:49Z @@ -30644,9 +30656,9 @@ namespace: zebrafish_anatomy def: "Anatomical space within the intestine where digestion normally occurs. The intestinal lumen begins as an interconnected web of small space at 43 hpf that over time remodels to form a single continuous tube at 68hpf. Lumen maturation proceeds from anterior to posterior along the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140415-28] synonym: "gut lumen" RELATED [] is_a: ZFA:0005930 ! lumen -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-14T01:57:57Z @@ -30659,9 +30671,9 @@ comment: Appears after cardiac looping ~30hpf. Derived from mesoderm. synonym: "proepicardial organ" EXACT [ZFIN:ZDB-PUB-080218-16] synonym: "proepicardium" EXACT [ZFIN:ZDB-PUB-140603-8] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-28T03:01:42Z @@ -30672,9 +30684,9 @@ namespace: zebrafish_anatomy def: "Network of heavily branched muscle in the atrium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-001026-2] synonym: "pectinate muscles" EXACT PLURAL [] is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-07-28T04:28:45Z @@ -30684,10 +30696,10 @@ name: trabecular layer of the atrium namespace: zebrafish_anatomy def: "Trabecular layer of the atrial myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001374 ! atrial myocardium relationship: part_of ZFA:0005059 ! trabecular layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-28T04:35:49Z @@ -30697,9 +30709,9 @@ name: heart vasculature namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:04:10Z @@ -30710,9 +30722,9 @@ namespace: zebrafish_anatomy def: "Artery that carries blood from the efferent branchial artery to the cardiac ventricle. The artery runs along the ventral surface of the bulbus arteriosus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] synonym: "coronary vessel" EXACT [ZFIN:ZDB-PUB-010912-30] is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005811 ! heart vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:05:29Z @@ -30722,9 +30734,9 @@ name: coronary capillary namespace: zebrafish_anatomy def: "Capillaries that innervate the subtrabecular layer of the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005811 ! heart vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:09:35Z @@ -30734,9 +30746,9 @@ name: coronary vein namespace: zebrafish_anatomy def: "Vein that carries blood from the coronary capillaries to the atrial chamber entering the atrium close to the atrioventricular region." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005811 ! heart vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:11:35Z @@ -30754,8 +30766,8 @@ synonym: "T-interneuron" EXACT [] synonym: "t-interneuron" EXACT [] xref: TAO:0005182 is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T02:33:52Z @@ -30766,9 +30778,9 @@ namespace: zebrafish_anatomy def: "Anterior longitudinal muscles of the dorsal fin. The dorsal fin protractor originates from the base of the first soft ray of the dorsal fin, extends along the midline just underneath the skin, and inserts at the posterior portion of the skull. Contracting the dorsal protractor will raise the fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] synonym: "protractor dorsalis" EXACT [] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-27T12:59:02Z @@ -30779,9 +30791,9 @@ namespace: zebrafish_anatomy def: "Anterior longitudinal muscles of the dorsal fin. That originates from the caudal end of the dorsal fin base, stretches along the midline between the right and left epaxial muscles, and inserts at the dorsal base of the tail fin. Contracting the dorsal retractor will lower the fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] synonym: "retractor dorsalis" EXACT [] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-27T01:05:51Z @@ -30791,8 +30803,8 @@ name: superficial caudal fin musculature namespace: zebrafish_anatomy def: "The layer of caudal fin musculature immediately under the integument that originate from the vertebral column and insert at the base of caudal fin rays." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] is_a: ZFA:0000628 ! caudal fin musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-29T04:13:54Z @@ -30802,8 +30814,8 @@ name: deep caudal fin musculature namespace: zebrafish_anatomy def: "The layer of caudal fin musculature immediately under the superficial caudal fin musculature that originate from the vertebral column and insert at the base of caudal fin rays. The three most caudal vertebrae and the hypurals serve as attachment sites for these muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] is_a: ZFA:0000628 ! caudal fin musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-29T04:16:13Z @@ -30815,10 +30827,10 @@ def: "Paired, deep caudal fin muscles that arise broadly from the hypurals and e synonym: "ACV" RELATED [] synonym: "adductor caudalis ventralis" EXACT [] is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000902 ! hypural muscle relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T09:51:20Z @@ -30830,9 +30842,9 @@ def: "Paired superficial caudal fin muscle that has a narrow attachment site alo synonym: "ICV" RELATED [] synonym: "interfilamenti caudalis ventralis" EXACT [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-10-30T10:11:24Z @@ -30844,9 +30856,9 @@ def: "Paired superficial caudal fin muscle that has a narrow attachment site alo synonym: "ICD" RELATED [] synonym: "interfilamenti caudalis dorsalis " EXACT [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-10-30T10:14:35Z @@ -30858,9 +30870,9 @@ def: "Paired superficial caudal fin muscle that originates from a broad base at synonym: "lateralis superficialis dorsalis" EXACT [] synonym: "LSD" RELATED [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T12:34:51Z @@ -30872,9 +30884,9 @@ def: "Paired superficial caudal fin muscle that is located ventrally and extends synonym: "lateralis profundus ventralis " EXACT [] synonym: "LPV" RELATED [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T12:44:54Z @@ -30886,9 +30898,9 @@ def: "Paired superfical caudal fin muscle that is located dorsally and extends f synonym: "lateralis profundus dorsalis" EXACT [] synonym: "LPD" RELATED [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T01:24:56Z @@ -30898,9 +30910,9 @@ name: tri-tipped trabecula namespace: zebrafish_anatomy def: "Cardiac muscle located in the trabecular layer of the ventricle that is attached to the base of the AV and BV valves. It is similar to the papillary muscle in mammals and birds but, does not attach to the ends of the valve leaflets." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005060 ! trabecular layer of ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-02-19T03:45:32Z @@ -30910,9 +30922,9 @@ name: transverse band namespace: zebrafish_anatomy def: "Cardiac muscle located in the trabecular layer of the ventricle that spans the central lumen near the ventricular apex. The transverse muscle band superficially resembles the septomarginal trabecula found in reptilian and mammalian hearts in that it spans the ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005060 ! trabecular layer of ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-02-19T03:48:37Z @@ -30924,8 +30936,8 @@ def: "An olfactory receptor cells with apical microvilli. The pear shaped soma subset: cell_slim synonym: "kappe neuron" EXACT [] is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-02-20T10:55:06Z @@ -30936,9 +30948,9 @@ namespace: zebrafish_anatomy def: "Vessel that drains aqueous humor from the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140728-8] comment: ZDB-PUB-140728-8 says the canal has lymphatic-like. is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-02-23T10:20:30Z @@ -30953,8 +30965,8 @@ synonym: "haemopoietic cell" RELATED [] synonym: "hemopoietic cell" EXACT [] xref: CL:0000988 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-02-27T09:55:34Z @@ -30965,9 +30977,9 @@ namespace: zebrafish_anatomy def: "Interconnected lymph vasculature in the anterior portion of the head." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "facial lymphatics" RELATED [] is_a: ZFA:0005105 ! lymph vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2015-04-21T03:16:49Z @@ -30979,11 +30991,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 3. The vessel s synonym: "LAA1" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001606 ! pharyngeal arch 3 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-21T04:16:23Z @@ -30995,11 +31007,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 4. The vessel s synonym: "LAA2" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001607 ! pharyngeal arch 4 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-22T10:05:13Z @@ -31011,11 +31023,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 5. The vessel s synonym: "LAA3" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001608 ! pharyngeal arch 5 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-22T10:06:52Z @@ -31027,11 +31039,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 6. The vessel s synonym: "LAA4 " EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001610 ! pharyngeal arch 7 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-04-22T10:18:37Z @@ -31043,9 +31055,9 @@ def: "Lymphangiogenic sprout that originates from the common cardinal vein and comment: Although a facial lymphatic vessel has previously been described using lymphangiography in 5-week-old zebrafish (Yaniv et al., 2006), we are not sure whether\nthis previously described vessel is connected to, or derived from, the FL network that we have identified (ZDB-PUB-120529-43). synonym: "FLS" EXACT [] is_a: ZFA:0005603 ! lymphangiogenic sprout -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2015-04-22T12:15:12Z @@ -31058,9 +31070,9 @@ synonym: "lateral facial lymphatic" EXACT [] synonym: "LFL" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005836 ! facial lymphatic sprout -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-04-22T12:41:36Z @@ -31072,9 +31084,9 @@ def: "Facial lymphatic vessel that sprouts from the lateral facial lymph vessel. synonym: "otolithic lymphatic vessel" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-04-22T02:06:44Z @@ -31087,9 +31099,9 @@ synonym: "medial facial lymphatic" EXACT [] synonym: "MFL " EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-23T01:49:47Z @@ -31101,8 +31113,8 @@ def: "Lymph vasculature surrounding the intestines." [GOC:cvs, ORCID:0000-0002-2 synonym: "" RELATED [] synonym: "intestinal lymphatics" EXACT [] is_a: ZFA:0005105 ! lymph vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-30T11:15:28Z @@ -31113,9 +31125,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel that follows the supraintestinal artery." [GOC:CVS, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "UR-IL" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005843 ! right intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:25:27Z @@ -31126,9 +31138,9 @@ namespace: zebrafish_anatomy def: "Pair of lymph vessel that follows the right subintestinal vein. At 6 dpf, the LR-IL appears to bifurcate and form two separate vessels that both run in close proximity to one another along the right sub intestinal vein. These vessels are difficult to distinguish from each other at 6dp." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "LR-IL" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005843 ! right intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:28:11Z @@ -31138,8 +31150,8 @@ name: right intestinal lymphatics namespace: zebrafish_anatomy def: "Lymph vessels that are on the right side of the intestine." [GOC:cvs, ORCID:0000-0002-2244-7917] is_a: ZFA:0005840 ! intestinal lymphatic network -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-30T11:31:28Z @@ -31149,9 +31161,9 @@ name: lymph vessel namespace: zebrafish_anatomy def: "Any of the tubular multi-tissue structures through which lymph moves in the body. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal." [GOC:cvs, ORCID:0000-0002-2244-7917] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-04-30T11:44:00Z @@ -31163,9 +31175,9 @@ def: "Lymph vessel that extends along the left subintestinal vein." [GOC:cvs, OR synonym: "LL-IL" EXACT [] synonym: "lower left intestinal lymphatic" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005846 ! left intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:49:08Z @@ -31175,8 +31187,8 @@ name: left intestinal lymphatics namespace: zebrafish_anatomy def: "Lymph vessels that are on the left side of the intestine. These do not run as far posteriorly as the right intestinal lymphatics." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005840 ! intestinal lymphatic network -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-30T11:52:58Z @@ -31187,9 +31199,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel on the left of the intestine that runs parallel to the upper right intestinal lymph vessel. There does not appear to be an associated blood vessel." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "UL-IL" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005846 ! left intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T12:28:46Z @@ -31199,9 +31211,9 @@ name: intestinal interlymphatic vessel namespace: zebrafish_anatomy def: "Lymph vessel that connects lymph vessels within the intestinal lymphatic network." [GOC:cvs, ORCID:0000-0002-2244-7917] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005840 ! intestinal lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T01:40:05Z @@ -31212,8 +31224,8 @@ namespace: zebrafish_anatomy def: "Is a multi-tissue structure composed of dentine, enameloid and tooth pulp that develops from the dental organ. These structures successively replace the primary ceratobranchial teeth." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-001208-4] is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: develops_from ZFA:0005138 ! dental organ -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth creation_date: 2015-06-19T12:48:15Z [Term] @@ -31226,8 +31238,8 @@ synonym: "nTPC" RELATED [] synonym: "nucleus of posterior commissure" EXACT [] synonym: "nucleus of the tract of the posterior commissure " RELATED [] is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-06-19T03:27:22Z @@ -31237,8 +31249,8 @@ name: ceratobranchial 5 primary tooth namespace: zebrafish_anatomy def: "Is a multi-tissue structure composed of dentine, enameloid and tooth pulp that develops from the dental organ. These are the first teeth to develop." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-020820-10] is_a: ZFA:0000694 ! ceratobranchial 5 tooth -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2015-07-01T04:53:58Z @@ -31248,9 +31260,9 @@ name: replacement tooth 4V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 3V and anterior to tooth 5V in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 4V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-07-01T04:55:16Z @@ -31260,9 +31272,9 @@ name: replacement tooth 5V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 5V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-07-02T09:04:21Z @@ -31272,9 +31284,9 @@ name: replacement tooth 3V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 3V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-07-02T09:05:23Z @@ -31284,9 +31296,9 @@ name: replacement tooth 2V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1V and anterior to tooth 3V in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 2V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-07-02T09:18:29Z @@ -31296,9 +31308,9 @@ name: replacement tooth 1V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 1V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-07-02T09:19:35Z @@ -31308,8 +31320,8 @@ name: bile namespace: zebrafish_anatomy def: "Zebrafish bile contains the bile alcohol cyprinol sulfate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120822-8] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-07-31T11:15:59Z @@ -31320,8 +31332,8 @@ namespace: zebrafish_anatomy def: "Capillaries that branch from the hyaloid artery and drain into the hyaloid vein. The hyaloid capillaries are located behind the lens and may be transient." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-150419-5] is_a: ZFA:0005046 ! hyaloid vessel is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-08-17T04:43:51Z @@ -31331,8 +31343,8 @@ name: ceratohyal-interhyal joint namespace: zebrafish_anatomy def: "Joint that articulates the interhyal skeletal element and ceratohyal skeletal element. The ceratohyal-interhyal joint is paired." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-970210-30] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-09-09T01:15:07Z @@ -31342,8 +31354,8 @@ name: interhyal-hyosymplectic joint namespace: zebrafish_anatomy def: "Joint that articulates the interhyal element and the hyosymplectic element. The interhyal-hyosymplectic joint is paired." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-970210-30] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-09-09T01:28:54Z @@ -31353,8 +31365,8 @@ name: opercle-hyosymplectic joint namespace: zebrafish_anatomy def: "Joint that articulates the opercle and they hyosymplectic. The opercle-hyosymplectic joint is paired." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-970210-30] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-09-09T01:33:46Z @@ -31364,8 +31376,8 @@ name: ovarian lymph vessel namespace: zebrafish_anatomy def: "Lymph vessels within the ovary. These vessels are located in the interstitium between ovarian follicles and appear to envelop arterioles." [GOC:CVS, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-130218-10] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2015-10-28T12:00:39Z @@ -31376,9 +31388,9 @@ namespace: zebrafish_anatomy def: "Pectoral fin muscle. Links pectoral fin and branchial movement and stabilizes the pectoral girdle. Thought to be the teleost homologue of the cucullaris muscle group." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-110803-26] synonym: "protractor pectoralis" EXACT [ZFIN:ZDB-PUB-110803-26] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-10-28T04:41:12Z @@ -31388,9 +31400,9 @@ name: retinotectal tract namespace: zebrafish_anatomy def: "Portion of optic tract that innervates the optic tectum." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1095, ZFIN:ZDB-PUB-961014-148] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000252 ! optic tract -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2016-01-11T03:48:45Z @@ -31399,9 +31411,10 @@ id: ZFA:0005865 name: reticulospinal neuron namespace: zebrafish_anatomy def: "Neuron with the large soma in the brain with an axon projecting caudally to the spinal cord." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-594] +subset: cell_slim is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-01-12T10:33:08Z @@ -31410,10 +31423,11 @@ id: ZFA:0005866 name: vestibulospinal neuron namespace: zebrafish_anatomy def: "CNS interneuron with a soma located in a cluster in the lateral wall of the medulla, with dendrites confined to the neuropil, that has connections to the vestibular and lateral line neurons." [ZFIN:ZDB-PUB-961014-572] +subset: cell_slim synonym: "V" RELATED [] is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-01-12T11:25:07Z @@ -31424,9 +31438,9 @@ namespace: zebrafish_anatomy def: "Mesoderm part of the head." [GOC:cvs, ORCiD:0000-0002-2244-7917\,] is_a: ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0000414 ! presumptive cephalic mesoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2016-01-14T02:01:33Z @@ -31438,9 +31452,9 @@ def: "Rostral cell mass bordering the pretectum. The cells are stained with the synonym: "tectal grey " EXACT [] is_a: ZFA:0001665 ! midbrain nucleus is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2016-01-22T12:54:41Z @@ -31450,9 +31464,9 @@ name: cerebellar plate namespace: zebrafish_anatomy def: "Multi-tissue structure that is made up of the external granular layer and the ventral proliferative layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2016-02-02T11:33:30Z @@ -31462,9 +31476,9 @@ name: cerebellar plate ventral proliferative layer namespace: zebrafish_anatomy def: "Proliferative zone on the ventral side of the cerebellar plate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005869 ! cerebellar plate -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2016-02-02T11:45:44Z @@ -31474,9 +31488,9 @@ name: region of the nucleus of the medial longitudinal fascicle namespace: zebrafish_anatomy def: "Portion of tissue in the midbrain that will develop into the nucleus of the medial longitudinal fasciculus synencephalon." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2016-02-02T11:47:50Z @@ -31487,9 +31501,9 @@ def: "Proliferative region that forms on peripheral side of the cerebellar plate synonym: "cerebellar plate peripheral proliferative zone" RELATED [] synonym: "EGL" EXACT [] is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005869 ! cerebellar plate -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2016-02-02T11:50:39Z @@ -31502,8 +31516,8 @@ subset: cell_slim xref: CL:0008025 is_a: ZFA:0009214 ! norepinephrine secreting cell is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-03-22T02:18:57Z @@ -31512,10 +31526,11 @@ id: ZFA:0005874 name: spiral neuron namespace: zebrafish_anatomy def: "Spiral neurons are excitatory interneurons located in rhombomere 3 and have contralateral projections that cross the midline forming commissures in rhombomere 3. After crossing the midline the two commissures fuse and project caudally synapsing with the Mauthner neuron. As they enter the axon cap, spiral fiber neurons lose their myelin and wrap around the axon hillock in a stereotyped spiral, where they make both electrical and glutamatergic synapses on the M cell axon close to the M-cell soma and with one another. Spiral neurons produced biphasic excitatory postsynaptic potentials (EPSPs) in the contralateral M-cell with a short latency." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010711-2, ZFIN:ZDB-PUB-110110-13, ZFIN:ZDB-PUB-150512-4] +subset: cell_slim is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-03-23T01:14:15Z @@ -31528,9 +31543,9 @@ comment: This tract was originally identified in zebrafish by Wilson et al., 199 synonym: " TCPT" EXACT [ZFIN:ZDB-PUB-961014-1268] synonym: "tract of the commissure of the posterior tuberculum" EXACT [] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000491 ! commissure of the caudal tuberculum -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2016-06-07T10:08:17Z @@ -31540,9 +31555,9 @@ name: anterior chamber eye namespace: zebrafish_anatomy def: "The space between the cornea and lens in the anterior segment of the eye where the aqueous humor is located." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-10-13T15:42:03Z @@ -31553,8 +31568,8 @@ namespace: zebrafish_anatomy def: "Commissure that is formed by a subset of TCPT axons that cross the midline in the diencephalon. The TCPTc does not appear to cross with other commissures. The initial crossing of the TCPTc occurs at approximately 36 hpf." [GOC:cvs, GOC:dsf, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120419-3.] synonym: "Commissure of the TCPT" EXACT [] is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2016-10-18T10:07:14Z @@ -31563,11 +31578,12 @@ id: ZFA:0005878 name: oogonia namespace: zebrafish_anatomy def: "An undifferentiated germ cell that proliferates rapidly and gives rise to oocytes. In zebrafish oogonia are round cells, with centrally located nucleoli, which are strongly basophilic. Oogonia in larva zebrafish fish are often found in clusters of two or four cells, corresponding to the second, or third oogonial divisions, presumably arising from mitotic divisions of primordial germ cells." [GOC:cvs, GOC:tfm, ISBN:0721662544, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120718-30] +subset: cell_slim xref: CL:0000024 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000413 ! gonad -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-12-14T12:05:24Z @@ -31579,9 +31595,9 @@ def: "Tubules formed by the seminiferous epithelium that contains spermatogenic synonym: "seminiferous tubules" EXACT PLURAL [] synonym: "sperm duct" BROAD [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-04-28T11:17:00Z @@ -31591,9 +31607,9 @@ name: seminiferous epithelium namespace: zebrafish_anatomy def: "Epithelium that lines the seminiferous tubules." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:39:16Z @@ -31603,9 +31619,9 @@ name: tunica propria of seminiferous tubule namespace: zebrafish_anatomy def: "The membranous sheath that surrounding the seminiferous tubule." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:44:18Z @@ -31615,9 +31631,9 @@ name: spermatogenic cyst namespace: zebrafish_anatomy def: "Structure in the testis formed by cytoplasmic projections of one or two Sertoli cells that surround a single spermatogonium. Sperm production occurs with in the cyst and the spermatogonium divides to generate approximately 1300 mature sperm. A given Sertoli cell is in contact with only one germ cell clone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:48:48Z @@ -31627,9 +31643,9 @@ name: tunica albuginea testis namespace: zebrafish_anatomy def: "Membranous sheath that surrounds the testis." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:51:24Z @@ -31639,9 +31655,9 @@ name: seminiferous tubule lumen namespace: zebrafish_anatomy def: "Lumen of the seminiferous tubule. Mature sperm is stored in the tubular lumen." [GOC:cvs, https://en.wikibooks.org/wiki/The_Zebrafish_in_Toxicology/Spermatogenesis, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2017-05-16T13:18:07Z @@ -31651,8 +31667,8 @@ name: operculohyoid ligament namespace: zebrafish_anatomy def: "Ligament that connects the anterior apex of the opercle to the posterior end of the ceratohyal. The ligament extends orthogonal and anterior to the opercle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-161030-16] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec creation_date: 2017-06-12T13:27:26Z [Term] @@ -31662,9 +31678,9 @@ namespace: zebrafish_anatomy def: "Cartilage that attaches the parachordal cartilage to the auditory capsule anterior to the basicapsular fenestra. The anterior basicapsular commissure are paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "anterior basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2017-10-20T11:38:57Z @@ -31675,9 +31691,9 @@ namespace: zebrafish_anatomy def: "Cartilage that attaches the parachordal cartilage to the auditory capsule posterior of the basicapsular fenestra. The posterior basicapsular commissure are paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "posterior basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2017-10-20T11:42:11Z @@ -31689,9 +31705,9 @@ def: "Cartilage that grows from the auditory capsule medially toward the anterio synonym: " lateral basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] synonym: "lateral commissure " RELATED [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2017-10-20T11:51:14Z @@ -31702,8 +31718,8 @@ namespace: zebrafish_anatomy def: "Syndesmosis that connects the posterior lateral edge of the epiotic to the posttemporal. The epiotic-posttemporal joint is paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "epioccipital-posttemporal joint" EXACT [] is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T15:00:45Z @@ -31713,8 +31729,8 @@ name: carotid artery canal namespace: zebrafish_anatomy def: "Canal where the carotid artery enters the cranium. Located between the parasphenoid and prootic bones in adult fish." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-25T14:53:32Z @@ -31725,8 +31741,8 @@ namespace: zebrafish_anatomy def: "Syndesmosis that connects the anterior edge epiotic to the parietal. The epiotic-parietal joint is paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "epioccipital-parietal" EXACT [] is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T15:30:23Z @@ -31737,8 +31753,8 @@ namespace: zebrafish_anatomy def: "Foramen that has the exoccipital as the anterior and dorsal rim. The occipital forms the anterior rim during early development." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "lateral occipital foramina" EXACT PLURAL [ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T16:00:30Z @@ -31748,8 +31764,8 @@ name: glossopharyngeal foramen namespace: zebrafish_anatomy def: "Foramen in the exoccipital through which the glossopharyngeal nerve (cranial nerve IX) passes." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T16:05:15Z @@ -31759,8 +31775,8 @@ name: vagus foramen namespace: zebrafish_anatomy def: "Foramen in the exoccipital through which the vagus nerve (cranial nerve X) passes." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T16:06:35Z @@ -31771,8 +31787,8 @@ namespace: zebrafish_anatomy def: "Chamber in the prootic where the trunks of the trigeminal facial nerve complex pass from the brain to the outside of the cranium. In the adult, a posteromedial extension from the prootic delimits the medial boundary of the trigeminal-facial chamber. The anterior opening of the trigeminal-facial chamber lies between the prootic and the pterosphenoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "trigeminofacialis chamber" EXACT [] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-27T16:53:59Z @@ -31784,9 +31800,9 @@ def: "Longitudinal unpaired muscle that attaches to the base of the most poster synonym: "infracarinalis posterior" EXACT [ZFIN:ZDB-PUB-151106-17, ZFIN:ZDB-PUB-180212-2] synonym: "retractor analis" EXACT [ZFIN:ZDB-PUB-171118-8] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2018-02-12T10:14:25Z @@ -31798,9 +31814,9 @@ def: "Longitudinal muscle that on the anterior end is continuous with the retra synonym: "infracarinalis medius" RELATED [ZFIN:ZDB-PUB-151106-17, ZFIN:ZDB-PUB-180212-2] synonym: "protractor analis" EXACT [ZFIN:ZDB-PUB-171118-8] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2018-02-12T10:37:38Z @@ -31811,9 +31827,9 @@ namespace: zebrafish_anatomy def: "Tissue that lies between the caudal artery and the caudal vein plexus where definitive hematopoiesis occurs after 48hpf and before the hematopoietic progenitors migrate to the thymus and kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-061227-29, ZFIN:ZDB-PUB-070303-37] synonym: "posterior blood island" RELATED [ZFIN:ZDB-PUB-070303-37] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2018-02-21T12:40:50Z @@ -31823,9 +31839,9 @@ name: scale focus namespace: zebrafish_anatomy def: "The initial growth point of the scale. In zebrafish the focus is on the anterior edge of the scale." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180311-2] is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-08-30T16:47:45Z @@ -31836,9 +31852,9 @@ namespace: zebrafish_anatomy def: "Grooves on the scale radiating from the focus. Zebrafish have primary radii that start at the focus and extend to the posterior margin of the scale." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180311-2] synonym: "scale radii" EXACT PLURAL [] is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-08-30T16:50:48Z @@ -31849,9 +31865,9 @@ namespace: zebrafish_anatomy def: "Transient groove in the dorsal eye lined by basal lamina. The groove extends across the dorsal retina to partially separate the nasal and temporal retinal lobes. The sulcus forms soon after optic cup formation and as the eye develops it becomes broader and shallower until it is undetectable." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180310-10] synonym: "dorsal ocular sulcus" EXACT [] is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Ceri creation_date: 2018-09-05T16:23:34Z @@ -31862,9 +31878,9 @@ namespace: zebrafish_anatomy def: "A medial cartilaginous spur that develops from the dorsomedial edge of the palatoquadrate. It is derived from cells located in the maxillary prominence of the first pharyngeal arch and gives rise to the metapterygoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100726-23, ZFIN:ZDB-PUB-961014-192] synonym: "Ptp" RELATED [] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001399 ! palatoquadrate cartilage -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2018-09-12T09:53:49Z @@ -31874,8 +31890,8 @@ name: cartilaginous projection namespace: zebrafish_anatomy def: "Skeletal tissue that is an extension of a skeletal element composed of cartilage." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-09-12T10:11:35Z @@ -31885,9 +31901,9 @@ name: retroarticular process namespace: zebrafish_anatomy def: "A protrusion of cartilage at the posteroventral tip of Meckel's cartilage that gives rise to the retroarticular." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-161203-3] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0001205 ! Meckel's cartilage -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-09-12T10:37:59Z @@ -31898,9 +31914,9 @@ namespace: zebrafish_anatomy def: "Cartilaginous protrusion on the posterodorsal region of Meckel's cartilage. The coronoid process of Meckel's cartilage forms the dorsal portion of the articulation with the anteroventral corner of the palatoquadrate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060724-1, ZFIN:ZDB-PUB-161203-3] synonym: " coronoid process of Meckel's cartilage" EXACT [] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001205 ! Meckel's cartilage -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-09-12T14:26:48Z @@ -31910,9 +31926,9 @@ name: Reissner's fiber namespace: zebrafish_anatomy def: "Thread-like fibrous aggregation of secreted molecules extending from the subcommissural organ (SCO) through the ventricular system and central canal to the end of the spinal cord." [GOC:cvs, ISBN:978-0471888895, ZFIN:ZDB-PUB-980205-16] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000938 ! central canal -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2018-11-29T11:06:47Z @@ -31924,9 +31940,9 @@ def: "Neuronal tissue that is the arborization field for the majority of the gan synonym: "synaptic neuropil " RELATED [ZFIN:ZDB-PUB-101101-16] synonym: "tectial lamina" RELATED [ZFIN:ZDB-PUB-081218-37] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2019-01-28T17:08:19Z @@ -31937,8 +31953,8 @@ namespace: zebrafish_anatomy def: "Region the larval brain that is a forerunner of the adult central and superficial pretectal regions. This region is non ventricular neural proliferation zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-030115-8, ZFIN:ZDB-PUB-990406-3] synonym: "M1" EXACT [ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2019-01-29T16:22:51Z @@ -31951,8 +31967,8 @@ synonym: "early migrated posterior tubercular region" RELATED [ZFIN:ZDB-PUB-0707 synonym: "M2" RELATED [ZFIN:ZDB-PUB-070711-1] synonym: "preglomerular anlagen " RELATED [ZFIN:ZDB-PUB-020912-2] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2019-01-29T16:37:24Z @@ -31963,8 +31979,8 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is presumed to give rise to the entopenduncular nucleus." [ZFIN:ZDB-PUB-040304-8, ZFIN:ZDB-PUB-090914-27] synonym: "M3" NARROW [] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2019-01-30T13:02:59Z @@ -31976,8 +31992,8 @@ def: "Portion of tissue that gives rise to the lateral nucleus of the ventral te synonym: "lateral nucleus of area ventralis telencepha" RELATED [ZFIN:ZDB-PUB-090814-14] synonym: "M4" RELATED [ZFIN:ZDB-PUB-090814-14] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2019-01-30T13:42:52Z @@ -31988,9 +32004,9 @@ namespace: zebrafish_anatomy def: "Pouch at the end of the endolymphatic duct that helps regulates pressure on the inner ear. The endolymphatic sac is separated from the endolymphatic duct by a dynamic lamellar barrier. The lamellar barrier is composed of long, thin lamellar sheets that form tongue-and-groove structure or interwoven broadly overlapping structures. In adults, the endolymphatic duct and sac are partially encased within the temporal bone such that the distal end of the endolymphatic sac protrudes out of the temporal bone into the cranial cavity ." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180622-24] xref: TAO:0002194 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown creation_date: 2019-04-16T14:25:54Z [Term] @@ -31999,8 +32015,8 @@ name: urine namespace: zebrafish_anatomy def: "Organism substance that is the output of the nephron." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050818-17] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2019-05-02T16:21:42Z [Term] @@ -32011,9 +32027,9 @@ def: "Iridophore layer of iris composed of a outer layer of regularly tiled iri synonym: "argenta " EXACT PLURAL [] synonym: "iridophore layer iris" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2019-05-29T15:43:36Z @@ -32023,9 +32039,9 @@ name: iris melanophore layer namespace: zebrafish_anatomy def: "Layer of melanophores that are positioned behind the argenta. The melanophore layer absorbs unfocused light preventing it from reaching the retina." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180822-3] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2019-05-29T15:55:27Z @@ -32036,9 +32052,9 @@ namespace: zebrafish_anatomy def: "Iridophore layer that forms along the dorsal region of the poster segment of the eye. The tapetum is formed by a single layer of Iridophores and is proximal to the photoreceptors and is located in the choroid. The tapetum reflects photons back to the photoreceptors if they were not initially absorbed by the photoreceptors." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180822-3] synonym: "tapetum cellulosum" RELATED [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2019-05-29T16:15:09Z @@ -32049,8 +32065,8 @@ namespace: zebrafish_anatomy def: "Neuromast where the paired hair cells are polarized along the anterior-posterior body axis." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-061205-16] synonym: "anteroposterior oriented neuromast" RELATED [] is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-06-18T10:40:23Z @@ -32061,8 +32077,8 @@ namespace: zebrafish_anatomy def: "Neuromast where the paired hair cells are polarized along the dorsal-ventral body axis." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-061205-16] synonym: "dorsoventral oriented neuromast" RELATED [] is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-06-18T10:44:49Z @@ -32075,8 +32091,8 @@ synonym: "perpendicular posterior lateral line neuromast" EXACT [ZFIN:ZDB-PUB-04 is_a: ZFA:0000940 ! posterior lateral line neuromast is_a: ZFA:0005918 ! dorsal-ventral polarized neuromast relationship: develops_from ZFA:0005116 ! secondary posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec created_by: ceriv creation_date: 2020-06-18T10:46:54Z @@ -32089,8 +32105,8 @@ synonym: "parallel posterior lateral line neuromast" RELATED [ZFIN:ZDB-PUB-04091 is_a: ZFA:0000940 ! posterior lateral line neuromast is_a: ZFA:0005917 ! anterior-posterior polarized neuromast relationship: develops_from ZFA:0005115 ! primary posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-06-18T10:53:53Z @@ -32103,8 +32119,8 @@ subset: cell_slim synonym: "migratory mesenchymal precursor " EXACT [ZFIN:ZDB-PUB-001205-1] synonym: "MMP" RELATED [] is_a: ZFA:0009291 ! muscle precursor cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000027 ! segmentation:20-25 somites creation_date: 2020-07-01T10:51:34Z [Term] @@ -32113,8 +32129,8 @@ name: migratory muscle precursor stream namespace: zebrafish_anatomy def: "Groups of migratory muscle precursor that migrate from a conserved origination in concerted manner along stereotyped path." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: ceriv creation_date: 2020-07-01T11:06:26Z @@ -32125,8 +32141,8 @@ namespace: zebrafish_anatomy def: "Muscle precursor stream that originates from the ventral regions of somites 1-3 and migrates anterior of the pectoral fin bud. Migratory muscle precursor from this stream form the esophageal striated muscle and sternohyoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-130709-61] synonym: "first migratory stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:10:27Z @@ -32137,8 +32153,8 @@ namespace: zebrafish_anatomy def: "Muscle precursor stream that originates from the ventral regions of somites 2-4 and migrates toward the pectoral fin bud. Migratory muscle precursors from this stream contribute to the pectoral fin musculature and make a small contribution to the posterior hypaxial muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-190808-2] synonym: "middle migratory muscle precursor stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:14:03Z @@ -32149,8 +32165,8 @@ namespace: zebrafish_anatomy def: "Migratory muscle precursor stream that originates from the ventral regions of somites 5-7 that migrates posterior to the pectoral fin bud. Migratory muscle precursors from this stream form the posterior hypaxial muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-190427-4] synonym: "third migratory stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:17:29Z @@ -32164,10 +32180,10 @@ synonym: "inferior obliquus muscle" BROAD [ZFIN:ZDB-PUB-020913-1] synonym: "PHM" RELATED [] synonym: "ventral-most hypaxial muscle " EXACT [ZFIN:ZDB-PUB-010924-1] is_a: ZFA:0000362 ! hypaxialis -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: has_developmental_contribution_from ZFA:0005924 ! middle migratory muscle precursor stream relationship: has_developmental_contribution_from ZFA:0005925 ! posterior migratory muscle precursor stream -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: ceriv creation_date: 2020-07-01T11:21:03Z @@ -32177,8 +32193,8 @@ name: endothelial blood brain barrier namespace: zebrafish_anatomy def: "Blood vessel endothelium that restricts the passage of circulating substances from the blood to the brain parenchyma while actively facilitating the passage of nutrients and removal of waste products. The developing blood brain barrier undergoes a period of transcytosis and leaks that decrease as the mature form is established. The barrier matures in a posterior to anterior direction." [GOC:cvs, ORCID:000-0002-2244-7917, ZFIN:ZDB-PUB-190821-6] is_a: ZFA:0005259 ! continuous blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth creation_date: 2020-07-30T10:25:52Z [Term] @@ -32189,8 +32205,8 @@ def: "Lecophores that develop from melanophores. Melanoleucophore are located at subset: cell_slim is_a: ZFA:0009261 ! leucophore relationship: develops_from ZFA:0009091 ! melanocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2020-11-04T13:46:59Z [Term] @@ -32202,8 +32218,8 @@ comment: ZDB-PUB-190912-11 mentions that on the 8th day of development Yellow subset: cell_slim is_a: ZFA:0009261 ! leucophore relationship: develops_from ZFA:0009198 ! xanthophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-11-04T14:18:50Z @@ -32213,8 +32229,8 @@ name: lumen namespace: zebrafish_anatomy def: "Anatomical space within a tubular organ, duct, or vessel." [GOC:cvs, https:en.org/wiki/Lumen_(anatomy), ORCID:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2020-11-20T13:39:11Z [Term] @@ -32223,8 +32239,8 @@ name: vascular plexus namespace: zebrafish_anatomy def: "Nonhierarchical network of interconnected vessels. May be the primitive state of a mature vascular structure." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-150418-3] is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: ceriv creation_date: 2020-11-20T14:12:43Z @@ -32234,8 +32250,8 @@ name: developmental vascular plexus namespace: zebrafish_anatomy def: "Transient plexus formed by vasculogenesis that results in the formation of an intermediate network of similar sized vessels with polygonal-shaped avascular spaces. As the vasculature matures it is remodeled into a hierarchical vascular tree." [GOC:cvs, ORCID:0000-0002-2244-7917, PMID:23799579, ZFIN:ZDB-PUB-150418-3] is_a: ZFA:0005931 ! vascular plexus -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: ceriv creation_date: 2020-11-20T14:29:48Z @@ -32247,8 +32263,8 @@ def: "Stable vascular plexus that persist in the adult animal." [GOC:cvs, ORCID: synonym: "capillary plexus" EXACT [] synonym: "mature vascular plexus" EXACT [] is_a: ZFA:0005931 ! vascular plexus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-11-20T14:32:44Z @@ -32259,8 +32275,8 @@ namespace: zebrafish_anatomy def: "Non stereotyped venous plexus derived from specialised angioblast that originate in the floor of the posterior cardinal vein. Emerges from the duct of Cuvier at 2dpf as a reticular structure that spreads bilaterally over the surface of the yolk and gut." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-150418-3, ZFIN:ZDB-PUB-151021-20, ZFIN:ZDB-PUB-151104-9] synonym: "subintestinal plexus" EXACT [] is_a: ZFA:0005931 ! vascular plexus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T14:35:56Z @@ -32272,8 +32288,8 @@ def: "Subintestinal venous plexus that wraps the yolk. Anterior vessels connecte synonym: "yolk plexus" RELATED [] is_a: ZFA:0005932 ! developmental vascular plexus is_a: ZFA:0005934 ! subintestinal venous plexus -relationship: end ZFS:0000039 ! Larval:Days 7-13 -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000039 ! larval:days 7-13 +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T14:41:40Z @@ -32284,8 +32300,8 @@ namespace: zebrafish_anatomy def: "Plexus that wraps the anterior digestive system. These vessels form the permanent, superficial vessels of the digestive system. The left subintestinal vein regresses and empties into the right subintestinal vein." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-151021-20] is_a: ZFA:0005933 ! mature plexus is_a: ZFA:0005934 ! subintestinal venous plexus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: ceriv creation_date: 2020-11-20T14:43:36Z @@ -32296,9 +32312,9 @@ namespace: zebrafish_anatomy def: "Vessels that form connections between the sub intestinal vein and the supraintestinal artery. There are fewer ICVs on the right side of the fish due to the asymmetrical development of the subintestinal veins." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-151104-9] synonym: "ICV" RELATED [] is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005934 ! subintestinal venous plexus -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T15:14:22Z @@ -32308,8 +32324,8 @@ name: inter-organ blood vessel namespace: zebrafish_anatomy def: "Blood vessel that bridge between organs." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-130710-65] is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2020-12-02T09:24:58Z [Term] @@ -32318,8 +32334,8 @@ name: liver pancreas connecting vessel namespace: zebrafish_anatomy def: "Blood vessels that bridge between the liver and pancreas. Four of these vessels have been described, called V1 LP-V4LP. The vessels may be transient or permanent and may make direct or indirect connections between the organ vasculature." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-130710-65] is_a: ZFA:0005938 ! inter-organ blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-02T09:30:41Z @@ -32329,8 +32345,8 @@ name: fibrocartilaginous callus namespace: zebrafish_anatomy def: "Temporary regenerating structure composed of chondrocytes and fibroblast that stabilizes the bone ends at a fracture site. The fibrocartilagionous callus surrounds the bone ends." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190807-16] is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2021-01-27T10:34:06Z [Term] @@ -32340,8 +32356,8 @@ namespace: zebrafish_anatomy def: "Temporary regenerating structure wider than the original bone composed of osteoblast and mineralized tissue that replaces the fibrocartilagenous callus at a bone fracture site. The bone callus is eventually remodeled to be the width of the surrounding bone." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190807-16] is_a: ZFA:0005147 ! regenerating tissue relationship: develops_from ZFA:0005940 ! fibrocartilaginous callus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2021-01-27T10:38:07Z @@ -32349,12 +32365,25 @@ creation_date: 2021-01-27T10:38:07Z id: ZFA:0005942 name: lysosome-rich enterocyte namespace: zebrafish_anatomy -def: "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes ." [GOC:cvs, ORCID:0000-0002-1009-339X, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190903-3] +def: "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes ." [GOC:cvs, ORCID:0000-0002-1009-339X, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190903-3] subset: cell_slim is_a: ZFA:0009269 ! enterocyte +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2021-01-27T10:44:40Z +[Term] +id: ZFA:0005943 +name: perivitelline fluid +namespace: zebrafish_anatomy +def: "Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance." [ZFIN:ZDB-PUB-200910-2] +is_a: ZFA:0000020 ! extraembryonic structure +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000001 ! zygote:1-cell +created_by: ceriv +creation_date: 2021-03-25T15:52:05Z + [Term] id: ZFA:0005944 name: mural cell @@ -32363,12 +32392,174 @@ def: "Cells that localize on the abluminal side of the vascular endothelium that subset: cell_slim xref: CL:0008034 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: ceriv creation_date: 2021-01-27T11:37:04Z +[Term] +id: ZFA:0005945 +name: long double cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "red-sensitive cone cell" EXACT [ZFIN:ZDB-PUB-990520-1] +synonym: "unequal double cone cell" RELATED [ZFIN:ZDB-PUB-961014-677] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec +creation_date: 2021-07-09T09:06:25Z + +[Term] +id: ZFA:0005946 +name: short double cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "green-sensitive cone" EXACT [ZFIN:ZDB-PUB-990520-1] +synonym: "unequal double cone cell" RELATED [ZFIN:ZDB-PUB-961014-677] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec +created_by: ceriv +creation_date: 2021-07-09T10:53:10Z + +[Term] +id: ZFA:0005947 +name: long single cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "blue-sensitive cone cell" EXACT [ZFIN:ZDB-PUB-990520-1] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-07-09T11:01:04Z + +[Term] +id: ZFA:0005948 +name: short single cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "ultraviolet-sensitive cone" EXACT [] +synonym: "UV-sensitive cone" EXACT [ZFIN:ZDB-PUB-990520-1] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-07-09T11:10:25Z + +[Term] +id: ZFA:0005949 +name: heart lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the heart." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0005844 ! lymph vessel +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0005952 ! heart lymphatic system +relationship: start ZFS:0000041 ! larval:days 21-29 +creation_date: 2021-08-13T11:47:35Z + +[Term] +id: ZFA:0005950 +name: bulbus arteriosus lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +synonym: "outflow tract lymph vessel" EXACT [] +is_a: ZFA:0005949 ! heart lymph vessel +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0000173 ! bulbus arteriosus +relationship: start ZFS:0000041 ! larval:days 21-29 +created_by: ceriv +creation_date: 2021-08-13T11:53:55Z + +[Term] +id: ZFA:0005951 +name: cardiac ventricle lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0005949 ! heart lymph vessel +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0000009 ! cardiac ventricle +relationship: start ZFS:0000043 ! juvenile:days 45-89 +created_by: ceriv +creation_date: 2021-08-13T11:58:24Z + +[Term] +id: ZFA:0005952 +name: heart lymphatic system +namespace: zebrafish_anatomy +def: "Lymphatic system of the heart." [GOC:CVS, ORCID:0000-0002-2244-7917] +is_a: ZFA:0005811 ! heart vasculature +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T12:23:44Z + +[Term] +id: ZFA:0005953 +name: coronary capillary plexus +namespace: zebrafish_anatomy +def: "Capillary plexus that is located in the heart." [GOC:cvs, ORCID:0000-0002-2244-7917] +is_a: ZFA:0005811 ! heart vasculature +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T12:26:17Z + +[Term] +id: ZFA:0005954 +name: cardiac lymphatic endothelial cluster +namespace: zebrafish_anatomy +def: "Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +synonym: "isolated lymph endothelial cells" EXACT [] +is_a: ZFA:0005955 ! lymphatic endothelial cluster +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0005952 ! heart lymphatic system +relationship: start ZFS:0000043 ! juvenile:days 45-89 +created_by: ceriv +creation_date: 2021-08-13T12:30:04Z + +[Term] +id: ZFA:0005955 +name: lymphatic endothelial cluster +namespace: zebrafish_anatomy +def: "Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0000385 ! lymphatic system +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T12:53:02Z + +[Term] +id: ZFA:0005956 +name: germline stem cell +namespace: zebrafish_anatomy +def: "A stem cell that can give rise to cell types of the germ-line." [ORCID:0000-0002-4142-7153] +subset: cell_slim +xref: CL:0000014 +is_a: ZFA:0005957 ! stem cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T13:44:39Z + +[Term] +id: ZFA:0005957 +name: stem cell +namespace: zebrafish_anatomy +def: "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells." [GOC:tfm] +subset: cell_slim +xref: CL:0000034 +is_a: ZFA:0009000 ! cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T13:47:16Z + [Term] id: ZFA:0006000 name: intermediate hypothalamus @@ -32377,9 +32568,9 @@ def: "Brain structure that lies perpendicular to the longitudinal axis of the em synonym: "Hi" EXACT [] xref: TAO:0006000 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: giles creation_date: 2009-03-26T02:23:30Z @@ -32392,9 +32583,9 @@ synonym: "saccular macula" EXACT [] xref: TAO:0007000 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000428 ! saccule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007001 @@ -32406,9 +32597,9 @@ synonym: "dorsorostral cluster" EXACT [] synonym: "drc" EXACT [] xref: TAO:0007001 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0007002 @@ -32420,9 +32611,9 @@ synonym: "ventrorostral cluster" EXACT [] synonym: "vrc" EXACT [] xref: TAO:0007002 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007003 @@ -32434,9 +32625,9 @@ synonym: "ventral caudal cluster" EXACT [] synonym: "ventrocaudal cluster" EXACT [] xref: TAO:0007003 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007004 @@ -32446,9 +32637,9 @@ def: "Early-developing neuronal cluster of the epiphysis. By 24 hpf the pioneer synonym: "ec" EXACT [] xref: TAO:0007004 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000019 ! epiphysis -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007005 @@ -32460,9 +32651,9 @@ synonym: "haemal prezygapophysis" EXACT [] synonym: "hemal prezygopophysis" EXACT [] xref: TAO:0007005 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000519 ! hemal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007006 @@ -32472,9 +32663,9 @@ def: "Surface structure that is one of the fleshy folds surrounding the opening synonym: "lips" EXACT PLURAL [] xref: TAO:0007006 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000547 ! mouth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007008 @@ -32486,8 +32677,8 @@ synonym: "ventral intermandibulari anterior" EXACT PLURAL [] xref: TAO:0007008 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007009 @@ -32497,9 +32688,9 @@ def: "A portion of tissue which is a fasciculated group of axons. Many time axon synonym: "nerves" EXACT PLURAL [] xref: TAO:0007009 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007010 @@ -32509,9 +32700,9 @@ def: "Part of the forebrain that is ventral to the ventral thalamus and dorsal t synonym: "eminentia thalami" EXACT [] xref: TAO:0007010 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007011 @@ -32522,9 +32713,9 @@ synonym: "rX" EXACT [] synonym: "vagus root" EXACT [] xref: TAO:0007011 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000453 ! cranial nerve X -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007012 @@ -32535,9 +32726,9 @@ synonym: "fasciculus lateralis telencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "lateral forebrain bundles" EXACT PLURAL [] xref: TAO:0007012 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007013 @@ -32547,8 +32738,8 @@ def: "Non neural ectoderm that surrounds the presumptive neural plate and gives synonym: "panplacodal ectoderm" EXACT [ZFIN:ZDB-PUB-070122-31] xref: TAO:0007013 is_a: ZFA:0001178 ! non neural ectoderm -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0007014 @@ -32557,9 +32748,9 @@ namespace: zebrafish_anatomy def: "Rostral portion of embryonic tissue that gives rise to the anterior neural plate." [GOC:mh, GOC:ymb, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-9900-7880] xref: TAO:0007014 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0007015 @@ -32568,9 +32759,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of embryonic tissue that gives rise to the posterior neural plate." [GOC:mh, GOC:ymb, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-9900-7880] xref: TAO:0007015 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0007016 @@ -32580,9 +32771,9 @@ def: "Rostral portion of the neural plate. Develops into the anterior neural ke xref: TAO:0007016 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007014 ! anterior presumptive neural plate -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0007017 @@ -32592,9 +32783,9 @@ def: "Posterior portion of the neural plate that gives rise to the posterior ne xref: TAO:0007017 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007015 ! posterior presumptive neural plate -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007018 @@ -32604,9 +32795,9 @@ def: "Anterior portion of anterior neural plate that gives rise to the forebrain xref: TAO:0007018 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000062 ! presumptive forebrain -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007019 @@ -32616,9 +32807,9 @@ def: "Portion of neural plate that gives rise to the midbrain neural keel." [GO xref: TAO:0007019 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000148 ! presumptive midbrain -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007020 @@ -32629,9 +32820,9 @@ synonym: "diencephalic-mesencephalic boundary neural plate" EXACT [] xref: TAO:0007020 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001368 ! presumptive forebrain midbrain boundary -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007021 @@ -32641,9 +32832,9 @@ def: "Portion of the posterior neural plate that gives rise to the spinal cord n xref: TAO:0007021 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000417 ! presumptive spinal cord -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007022 @@ -32653,9 +32844,9 @@ def: "Portion of posterior neural plate that gives rise to the hindbrain neural xref: TAO:0007022 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000569 ! presumptive hindbrain -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007023 @@ -32665,9 +32856,9 @@ def: "Posterior portion of the neural keel that gives rise to the posterior neur xref: TAO:0007023 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007017 ! posterior neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007024 @@ -32677,9 +32868,9 @@ def: "Rostral portion of the neural keel. Develops into the anterior neural rod xref: TAO:0007024 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007016 ! anterior neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007025 @@ -32689,9 +32880,9 @@ def: "Portion of neural keel that gives rise to the midbrain neural rod." [GOC: xref: TAO:0007025 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007019 ! midbrain neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007026 @@ -32701,9 +32892,9 @@ def: "Anterior portion of anterior neural keel that gives rise to the forebrain xref: TAO:0007026 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007018 ! forebrain neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007027 @@ -32714,9 +32905,9 @@ synonym: "diencephalic-mesencephalic boundary neural keel" EXACT [] xref: TAO:0007027 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007020 ! forebrain midbrain boundary neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007028 @@ -32725,9 +32916,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural keel that gives rise to the spinal cord neural rod." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007028 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007029 @@ -32737,9 +32928,9 @@ def: "Portion of posterior neural keel that gives rise to the hindbrain neural r xref: TAO:0007029 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007022 ! hindbrain neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007030 @@ -32749,9 +32940,9 @@ def: "Posterior portion of the neural rod that gives rise to the posterior neura xref: TAO:0007030 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007023 ! posterior neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007031 @@ -32761,9 +32952,9 @@ def: "Rostral portion of the neural rod. Develops into the anterior neural tube xref: TAO:0007031 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007024 ! anterior neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007032 @@ -32773,9 +32964,9 @@ def: "Portion of neural rod that gives rise to the midbrain neural tube." [GOC xref: TAO:0007032 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007025 ! midbrain neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007033 @@ -32786,9 +32977,9 @@ synonym: "diencephalic-mesencephalic boundary neural rod" EXACT [] xref: TAO:0007033 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007027 ! forebrain midbrain boundary neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007034 @@ -32798,9 +32989,9 @@ def: "Anterior portion of anterior neural rod that gives rise to the forebrain n xref: TAO:0007034 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007026 ! forebrain neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007035 @@ -32809,9 +33000,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural rod that gives rise to the spinal cord neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007035 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007036 @@ -32821,9 +33012,9 @@ def: "Portion of posterior neural rod that gives rise to the hindbrain neural tu xref: TAO:0007036 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007029 ! hindbrain neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007037 @@ -32833,9 +33024,9 @@ def: "Posterior portion of the neural tube that gives rise to the hindbrain and xref: TAO:0007037 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007030 ! posterior neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007038 @@ -32845,9 +33036,9 @@ def: "Rostral portion of the neural tube." [GOC:mh, GOC:ymb, ORCiD:0000-0001-911 xref: TAO:0007038 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007031 ! anterior neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007039 @@ -32857,9 +33048,9 @@ def: "Portion of neural tube that gives rise to the midbrain." [GOC:mh, GOC:ymb xref: TAO:0007039 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007032 ! midbrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007040 @@ -32870,9 +33061,9 @@ synonym: "diencephalic-mesencephalic boundary neural tube" EXACT [] xref: TAO:0007040 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007033 ! forebrain midbrain boundary neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007041 @@ -32882,9 +33073,9 @@ def: "Anterior portion of anterior neural rod that gives rise to the forebrain." xref: TAO:0007041 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007034 ! forebrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007042 @@ -32893,9 +33084,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural tube that gives rise to the spinal cord." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007042 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007043 @@ -32905,9 +33096,9 @@ def: "Portion of posterior neural tube that gives rise to the hindbrain." [GOC:m xref: TAO:0007043 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007036 ! hindbrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007044 @@ -32918,9 +33109,9 @@ synonym: "midbrain-hindbrain boundary neural plate" EXACT [] xref: TAO:0007044 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001187 ! presumptive midbrain hindbrain boundary -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007045 @@ -32931,9 +33122,9 @@ synonym: "midbrain-hindbrain boundary neural keel" EXACT [] xref: TAO:0007045 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007044 ! midbrain hindbrain boundary neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007046 @@ -32944,9 +33135,9 @@ synonym: "midbrain-hindbrain boundary neural rod" EXACT [] xref: TAO:0007046 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007045 ! midbrain hindbrain boundary neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007047 @@ -32957,9 +33148,9 @@ synonym: "midbrain-hindbrain boundary neural tube" EXACT [] xref: TAO:0007047 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007046 ! midbrain hindbrain boundary neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007048 @@ -32971,8 +33162,8 @@ synonym: "ventral intermandibulari posterior" EXACT PLURAL [] xref: TAO:0007048 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007049 @@ -32982,8 +33173,8 @@ def: "Is a mandibular muscle that forms along the palatoquadrates and inserts on synonym: "dorsal adductor mandibulae" EXACT [] xref: TAO:0007049 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000041 ! Larval:Days 21-29 -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000041 ! larval:days 21-29 +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0007050 @@ -32993,8 +33184,8 @@ def: "Dorsal subdivision of the putative mandibular muscle plate. Splits into th synonym: "constrictors dorsalis" EXACT PLURAL [] xref: TAO:0007050 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000035 ! Larval:Protruding-mouth -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000035 ! larval:protruding-mouth +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007051 @@ -33006,8 +33197,8 @@ synonym: "ventral interhyoidei" EXACT PLURAL [] synonym: "ventral interhyoideus" EXACT [] xref: TAO:0007051 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007052 @@ -33017,8 +33208,8 @@ def: "Is a ventral,paired hyoid muscle that inserts at the most anterior basibra synonym: "hyohyal" EXACT [] xref: TAO:0007052 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007053 @@ -33029,8 +33220,8 @@ synonym: "dorsal adductor hyomandibulae" EXACT [] synonym: "dorsal adductors hyomandibulae" EXACT PLURAL [] xref: TAO:0007053 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007054 @@ -33045,9 +33236,9 @@ xref: TAO:0007054 is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0000232 ! otic vesicle lateral protrusion relationship: develops_from ZFA:0000469 ! otic vesicle anterior protrusion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0007055 @@ -33061,9 +33252,9 @@ synonym: "ventral piller of the semicircular canal" EXACT [] xref: TAO:0007055 is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0001716 ! otic vesicle ventral protrusion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0007056 @@ -33077,9 +33268,9 @@ synonym: "posterior pillar of the semicircular" EXACT [] is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0000232 ! otic vesicle lateral protrusion relationship: develops_from ZFA:0000412 ! otic vesicle posterior protrusion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0007057 @@ -33091,8 +33282,8 @@ synonym: "ocular vasculature" RELATED [] synonym: "optic vasculature" EXACT [] xref: TAO:0007057 is_a: ZFA:0005297 ! cranial blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0007058 @@ -33101,9 +33292,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the dorsal-most aspect of the developing neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0007058 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007059 @@ -33114,8 +33305,8 @@ synonym: "neurogenic fields" EXACT PLURAL [] xref: TAO:0007059 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007013 ! preplacodal ectoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007060 @@ -33125,8 +33316,8 @@ def: "Neurogenic field fated to develop into a dorsolateral placode." [GOC:ymb, synonym: "dorsolateral fields" EXACT PLURAL [] xref: TAO:0007060 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007061 @@ -33136,8 +33327,8 @@ def: "Neurogenic field fated to develop into an epibranchial placode." [GOC:ymb, synonym: "epibranchial fields" EXACT PLURAL [] xref: TAO:0007061 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007062 @@ -33147,8 +33338,8 @@ def: "Neurogenic field fated to develop into the olfactory placode." [GOC:ymb, O synonym: "olfactory fields" EXACT PLURAL [] xref: TAO:0007062 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000025 ! Segmentation:10-13 somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000025 ! segmentation:10-13 somites +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007063 @@ -33158,8 +33349,8 @@ def: "Cranial neural crest that is part of the hindbrain." [GOC:ymb, ORCiD:0000- synonym: "rhombencephalic neural crest" EXACT [] xref: TAO:0007063 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:51:35Z @@ -33170,9 +33361,9 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the mandibular arch." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-061108-6] xref: TAO:0007064 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:53:53Z @@ -33183,9 +33374,9 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the hyoid arch." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-061108-6] xref: TAO:0007065 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:56:12Z @@ -33196,8 +33387,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the glossopharyngeal ganglion." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0007066 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-11-04T03:39:42Z @@ -33208,8 +33399,8 @@ namespace: zebrafish_anatomy synonym: "gX" EXACT [] xref: TAO:0007067 is_a: ZFA:0001555 ! epibranchial ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2010-04-21T09:45:38Z @@ -33219,8 +33410,8 @@ name: otic epithelium namespace: zebrafish_anatomy def: "Is an epithelium of the auditory apparatus." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2011-04-26T12:34:16Z @@ -33230,8 +33421,8 @@ name: otic squamous epithelium namespace: zebrafish_anatomy def: "Is an otic epithelium composed of cells with a squamous morphology." [GOC:ymb, ISBN:019514502X, ORCiD:0000-0002-9900-7880] is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2011-04-26T12:38:05Z @@ -33241,8 +33432,8 @@ name: otic sensory epithelium namespace: zebrafish_anatomy def: "Is an otic epithelium that is a neuroepithelium which is pseudostratified and senses sound." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2011-04-26T12:43:35Z @@ -33252,9 +33443,9 @@ name: flexural organ namespace: zebrafish_anatomy def: "Is a portion of tissue that is the most anterior portion of the notochord. The flexural organ secretes Reissner's fiber-related proteins, including F-spondin." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-120709-5] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2012-07-18T02:12:26Z @@ -33264,9 +33455,9 @@ name: blood sinus namespace: zebrafish_anatomy def: "Is a multitissue structure that accumulates blood." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2014-10-24T02:12:44Z @@ -33277,9 +33468,9 @@ namespace: zebrafish_anatomy def: "An enlarged chamber in the blood sinus capable of accumulating a large volume of blood." [GOC:ymb, ORCiD:0000-0002-9900-7880] synonym: "blood sinus lumen" EXACT [] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007072 ! blood sinus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2014-10-24T02:14:28Z @@ -33289,9 +33480,9 @@ name: maxillary barbel blood sinus namespace: zebrafish_anatomy def: "Is a three-chambered blood sinus found at the base of the maxillary barbel. Responsible, in part, for the movement of the maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140816-6] is_a: ZFA:0007072 ! blood sinus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:18:03Z @@ -33301,9 +33492,9 @@ name: distal bulb of the maxillary blood sinus namespace: zebrafish_anatomy def: "Is a multi-tissue structure forming the smallest chamber of the maxillary barbel blood sinus. It projects into the barbel shaft and has a blood filled lumen, into which extend irregular septa of vascular smooth muscle cells. Additional smooth muscle cells surround the lumen and attach the bulb to the barbel core. Circumferential to the core, there is a thin band of dermal tissue through with run several smaller capillaries and the barbel branch of the of the facial nerve (cranial nerve VII). The entire structure is wrapped by a glandular, stratified epithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:22:04Z @@ -33313,9 +33504,9 @@ name: central chamber of the maxillary blood sinus namespace: zebrafish_anatomy def: "Is a multi-tissue structure that is located outside the maxillary barbel proper and is positioned on the lateral surface of the maxilla, medially attached to the lateral surface of the maxillary bone and is laterally is attached to a hemispheric capsule of dense connective tissue of the distal bulb. It connects with the smaller accessory chamber through a slight isthmus. It has a smooth muscle tunic from which extend luminally projecting muscular septa." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:27:58Z @@ -33325,9 +33516,9 @@ name: accessory chamber of the maxillary blood sinus namespace: zebrafish_anatomy def: "Is a multi-tissue structure part of the maxillary barbel blood sinus which is connected to the central chamber of the maxillary blood sinus by a slight isthmus. It is not muscularized, has no dense connective tissue capsule and is not attached to adjacent bone. Is composed of dark tunica intima wrapped by thick, light tunica adventitia; cells within the adventitia are widely separated, with extended cytoplasmic veils. External to the adventitia, a branch of the facial nerve and several smaller nerve bundles appear in cross section just lateral to the isthmus. These nerves are in the dermis, but outside the sinus." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:34:40Z @@ -33338,9 +33529,9 @@ namespace: zebrafish_anatomy def: "A blind end lymph vessel that emerges from the maxilla, wraps around the sinus isthmus, then runs alongside the distal bulb to enter the barbel shaft proper." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1, ZFIN:ZDB-PUB-140816-6] synonym: "dorsal maxillary barbel lymph vessel" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:41:22Z @@ -33351,9 +33542,9 @@ namespace: zebrafish_anatomy def: "Blood vessel that emerges from the maxilla, wraps around the sinus isthmus, then runs alongside the distal bulb to enter the barbel shaft proper. There are two ventral vessels that connect distally in the maxillary barbel forming a complete capillary loop." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1, ZFIN:ZDB-PUB-140816-6] synonym: "ventral maxillary barbel blood vessel" EXACT [] is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:46:19Z @@ -33363,9 +33554,9 @@ name: maxillary barbel vasculature namespace: zebrafish_anatomy def: "Is a vasculature that delivers fluid to the maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1] is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:52:05Z @@ -33375,9 +33566,9 @@ name: maxillary barbel proximal plexus namespace: zebrafish_anatomy def: "Is a vascular plexus at the base, or proximal end, of the developing maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1, ZFIN:ZDB-PUB-140816-6] is_a: ZFA:0007080 ! maxillary barbel vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:55:07Z @@ -33387,9 +33578,9 @@ name: neural plate border namespace: zebrafish_anatomy def: "Region of the neural plate that will give rise to the neural crest. The neural plate border includes progenitors for the dorsal neural tube, the neural crest, and placodes. It is a broad competence domain, established between neural and non-neural ectoderm within which subtle and sequential cell autonomous and non-cell autonomous molecular interactions will progressively define the neural crest fate from adjacent dorsal neural fates." [GOC:ymb, ORCiD:0000-0002-9900-7880, PMID:22305800] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly created_by: yvonne creation_date: 2016-01-28T08:43:28Z @@ -33400,8 +33591,8 @@ namespace: zebrafish_anatomy def: "Premigratory neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000045 ! neural crest relationship: develops_from ZFA:0007082 ! neural plate border -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: yvonne creation_date: 2016-01-28T09:06:50Z @@ -33410,12 +33601,13 @@ id: ZFA:0007084 name: premigratory neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory neural crest cells" EXACT PLURAL [] xref: CL:0007004 is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0007083 ! premigratory neural crest -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: yvonne creation_date: 2016-01-28T09:29:06Z @@ -33426,8 +33618,8 @@ namespace: zebrafish_anatomy def: "Migratory neural crest population that develops from premigratory neural crest. This group of neural crest has undergone ectomesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000045 ! neural crest relationship: develops_from ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-01-28T12:04:14Z @@ -33436,13 +33628,14 @@ id: ZFA:0007086 name: migratory neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory neural crest population. Migratory neural crest cells develop from premigratory neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory neural crest cells" EXACT PLURAL [] xref: CL:0000333 is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0007084 ! premigratory neural crest cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0007085 ! migratory neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-01-28T01:35:09Z @@ -33454,8 +33647,8 @@ def: "Migratory cranial neural crest population that develops from premigratory is_a: ZFA:0001194 ! cranial neural crest is_a: ZFA:0007085 ! migratory neural crest relationship: develops_from ZFA:0007088 ! premigratory cranial neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-03-07T11:45:15Z @@ -33466,8 +33659,8 @@ namespace: zebrafish_anatomy def: "Premigratory cranial neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001194 ! cranial neural crest is_a: ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-07T03:27:33Z @@ -33476,10 +33669,11 @@ id: ZFA:0007089 name: embryonic cell namespace: zebrafish_anatomy def: "A cell of the embryo." [CL:curator] +subset: cell_slim xref: CL:0002321 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000001 ! zygote:1-cell created_by: yvonne creation_date: 2016-03-30T01:24:36Z @@ -33488,12 +33682,13 @@ id: ZFA:0007090 name: premigratory cranial neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory cranial neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory cranial neural crest cells" EXACT PLURAL [] is_a: ZFA:0007084 ! premigratory neural crest cell is_a: ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007088 ! premigratory cranial neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T12:37:58Z @@ -33502,13 +33697,14 @@ id: ZFA:0007091 name: migratory cranial neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory cranial neural crest population. Migratory cranial neural crest cells develop from premigratory cranial neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory cranial neural crest cells" EXACT PLURAL [] xref: CL:0000008 is_a: ZFA:0007086 ! migratory neural crest cell relationship: develops_from ZFA:0007090 ! premigratory cranial neural crest cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007087 ! migratory cranial neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-03-31T12:43:55Z @@ -33519,8 +33715,8 @@ namespace: zebrafish_anatomy def: "Premigratory trunk neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001024 ! trunk neural crest is_a: ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000030 ! pharyngula:prim-15 +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:03:25Z @@ -33532,8 +33728,8 @@ def: "Migratory trunk neural crest population that develops from premigratory tr is_a: ZFA:0001024 ! trunk neural crest is_a: ZFA:0007085 ! migratory neural crest relationship: develops_from ZFA:0007092 ! premigratory trunk neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:11:09Z @@ -33542,12 +33738,13 @@ id: ZFA:0007094 name: premigratory trunk neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory trunk neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory trunk neural crest cells" EXACT PLURAL [] is_a: ZFA:0007084 ! premigratory neural crest cell is_a: ZFA:0009004 ! trunk neural crest cell -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0007092 ! premigratory trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:18:04Z @@ -33556,13 +33753,14 @@ id: ZFA:0007095 name: migratory trunk neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory trunk neural crest population. Migratory trunk neural crest cells develop from premigratory trunk neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory trunk neural crest cells" EXACT PLURAL [] xref: CL:0000011 is_a: ZFA:0007086 ! migratory neural crest cell relationship: develops_from ZFA:0007094 ! premigratory trunk neural crest cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0007093 ! migratory trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:22:09Z @@ -33572,8 +33770,8 @@ name: vertebra 13 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 12." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T14:15:01Z @@ -33583,8 +33781,8 @@ name: vertebra 14 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 13." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T14:22:33Z @@ -33594,8 +33792,8 @@ name: vertebra 15 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 14." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:10:35Z @@ -33605,8 +33803,8 @@ name: vertebra 16 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 15." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:15:45Z @@ -33616,8 +33814,8 @@ name: vertebra 17 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 16." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:17:20Z @@ -33627,8 +33825,8 @@ name: vertebra 18 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 17." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:19:07Z @@ -33638,8 +33836,8 @@ name: vertebra 19 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 18." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:20:46Z @@ -33649,8 +33847,8 @@ name: vertebra 20 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 19." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:22:42Z @@ -33660,8 +33858,8 @@ name: vertebra 21 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 20." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:24:43Z @@ -33671,8 +33869,8 @@ name: vertebra 22 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 21." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:26:15Z @@ -33682,8 +33880,8 @@ name: vertebra 23 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 22." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:29:09Z @@ -33693,8 +33891,8 @@ name: vertebra 24 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 23." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:31:04Z @@ -33704,8 +33902,8 @@ name: vertebra 25 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 24." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:32:40Z @@ -33715,8 +33913,8 @@ name: vertebra 26 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 25." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:34:15Z @@ -33726,8 +33924,8 @@ name: vertebra 27 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 26." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:36:10Z @@ -33737,8 +33935,8 @@ name: vertebra 28 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 27." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:37:40Z @@ -33748,8 +33946,8 @@ name: vertebra 29 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 28." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:39:17Z @@ -33759,8 +33957,8 @@ name: vertebra 30 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 29." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:41:01Z @@ -33770,8 +33968,8 @@ name: anatomical conduit namespace: zebrafish_anatomy def: "An anatomical structure that is an opening or tube that connects two distinct anatomical spaces." [GOC:ymb, ORCid:0000-0002-9900-7880] is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2018-03-23T11:46:06Z @@ -33781,8 +33979,8 @@ name: pericardial region namespace: zebrafish_anatomy def: "An anatomical cluster composed of the heart and associated structures." [GOC:ymb, ORCid:0000-0002-9900-7880] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2018-03-26T11:52:32Z @@ -33792,8 +33990,8 @@ name: pleuroperitoneal region namespace: zebrafish_anatomy def: "An anatomical cluster composed of the organs of the pleuroperitoneal cavity and associated structures." [GOC:ymb, ORCid:0000-0002-9900-7880] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2018-03-26T14:19:43Z @@ -33804,8 +34002,8 @@ namespace: zebrafish_anatomy def: "Joint between Meckel's cartilage and palatoquadrate cartilage." [GOC:ymb, ORCid:0000-0002-9900-7880, ZFIN:ZDB-PUB-151122-6] synonym: "jaw joint" EXACT [] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Yvonne creation_date: 2019-04-05T15:06:57Z @@ -33816,9 +34014,9 @@ namespace: zebrafish_anatomy def: "The vertebral body end plate is part of the autocentrum. The anterior and posterior surfaces of the autocentrum constitute the funnel shaped vertebral body end plates. The outer rim of the end plate is the vertebral body growth zone. The anterior and posterior end plates are connected by bony plates that are horizontally attached to the ourter contour of the autocentrum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-180228-2] synonym: "vertebral body endplate" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000126 ! centrum -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Yvonne creation_date: 2019-04-08T12:21:06Z @@ -33829,9 +34027,9 @@ namespace: zebrafish_anatomy def: "Ligament that connects adjacent vertebra. The intervertebral ligament (IVL) connects the posterior vertebral end plate to the anterior vertebral end plate of adjacent vertebra. For example the IVL connects the posterior end plate of vertebra 14 to the anterior end plate of vertebra 15. It is typically composed of three distinct layers: the notochord sheet which is mainly type II collagen; the outer elastin layer; and a layer of type I collagen fiber bundles." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-180808-7] synonym: "IVL" EXACT [] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Yvonne creation_date: 2019-04-08T13:27:22Z @@ -33840,13 +34038,14 @@ id: ZFA:0007120 name: cerebrospinal fluid contacting neuron namespace: zebrafish_anatomy def: "Spinal cord interneuron located along the central canal that extends a microvilliated apical process into the cerebrospinal fluid and extends ascending axonal projections ventrally and ipsilaterally. CSF-cNs are GABAergic neurons that express PKD2L1 (TRPP3) channels and have been shown to be chemosensory and mechanosensory, responding to pH and osmolarity changes as well as mechanical stimuli associated with tail bending. CSF-cNs originate from two distinct progenitor domains, p3 and pMN. CSF-cNs project onto caudal primary (CaP motor neurons) and commissural primary ascending (CoPA) sensory interneurons within the escape circuit as well as onto V0-v interneurons within the slow swimming circuit." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-170409-2] +subset: cell_slim synonym: "CSF-cN" EXACT [ZFIN:ZDB-PUB-170409-2] synonym: "CSF-cNs" EXACT PLURAL [ZFIN:ZDB-PUB-170409-2] is_a: ZFA:0000778 ! spinal cord interneuron is_a: ZFA:0009120 ! mechanoreceptor cell is_a: ZFA:0009124 ! chemoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Yvonne creation_date: 2020-03-03T10:15:16Z @@ -33855,12 +34054,13 @@ id: ZFA:0007121 name: ventral cerebrospinal fluid contacting neuron namespace: zebrafish_anatomy def: "A cerebrospinal fluid contacting neuron that originates form p3 progenitor domain. The apical extension of ventral CSF-cNs are more compact than that of dorsal CSF-cNs. Ventral CSF-cNs synapse with CaP motor neurons and project onto CoPA sensory interneurons. Ventral CSF-cNs respond to longitudinal contractions of the spinal cord. Frequently called KA\" neurons." [GOC:ymb, ORDiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-170409-2] +subset: cell_slim synonym: "KA 2" RELATED [] synonym: "ventral CSF-cN" EXACT [ZFIN:ZDB-PUB-170409-2] synonym: "ventral CSF-cNs" EXACT PLURAL [ZFIN:ZDB-PUB-170409-2] is_a: ZFA:0007120 ! cerebrospinal fluid contacting neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Yvonne creation_date: 2020-03-03T10:51:35Z @@ -33869,11 +34069,12 @@ id: ZFA:0007122 name: epidermal stem cell namespace: zebrafish_anatomy def: "A stem cell that gives rise to several epidermal cell types, including ionocytes and keratinocytes." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "" RELATED [] xref: CL:1000428 is_a: ZFA:0009020 ! multi fate stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T13:31:57Z @@ -33882,11 +34083,12 @@ id: ZFA:0007123 name: ionocyte progenitor cell namespace: zebrafish_anatomy def: "A cell that will become an ionocyte. Ionocyte progenitor cells develop from epidermal stem cells in the ventral ectoderm that are DeltaC and Tp63 positive." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-190402-19] +subset: cell_slim synonym: "ionocyte progenitor cells" EXACT PLURAL [] is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0007122 ! epidermal stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T14:01:21Z @@ -33895,11 +34097,12 @@ id: ZFA:0007124 name: keratinocyte progenitor cell namespace: zebrafish_anatomy def: "A cell that will become a keratinocyte. Keratinocyte progenitor cells develop from epidermal stem cells in the ventral ectoderm that are DeltaC negative and Tp63 positive." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-190402-19] +subset: cell_slim synonym: "keratinocyte progenitor cells" EXACT PLURAL [] is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0007122 ! epidermal stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T14:12:30Z @@ -33910,9 +34113,9 @@ namespace: zebrafish_anatomy def: "A portion of tissue that is the deepest point of the fold of the midbrain hindbrain boundary. In zebrafish the midbrain hindbrain boundary constriction (MHBC) is formed soon after neural tube closure. The MHBC is formed by the bending of the basal side of the neuroepithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-080825-24] synonym: "MHBC" EXACT [ZFIN:ZDB-PUB-080825-24] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Yvonne creation_date: 2020-03-04T12:35:25Z @@ -33927,9 +34130,9 @@ xref: CARO:0000013 xref: CL:0000000 xref: TAO:0009000 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0009001 @@ -33940,8 +34143,8 @@ synonym: "receptor cells (sensu Animalia)" EXACT PLURAL [] xref: CL:0000006 xref: TAO:0009001 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009002 @@ -33953,8 +34156,8 @@ synonym: "early embryonic cells" EXACT PLURAL [] xref: CL:0000007 xref: TAO:0009002 is_a: ZFA:0007089 ! embryonic cell -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0009003 @@ -33964,9 +34167,9 @@ def: "A cell of the cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] subset: cell_slim synonym: "cranial neural crest cells" EXACT PLURAL [] is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001194 ! cranial neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009004 @@ -33976,9 +34179,9 @@ def: "A cell of the trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] subset: cell_slim synonym: "trunk neural crest cells" EXACT PLURAL [] is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0001024 ! trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009005 @@ -33991,9 +34194,9 @@ xref: CL:0000017 xref: TAO:0009005 is_a: ZFA:0009016 ! germ line cell relationship: develops_from ZFA:0009007 ! spermatogonium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0009006 @@ -34007,8 +34210,8 @@ synonym: "spermatozoon" EXACT [] xref: CL:0000019 xref: TAO:0009006 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009007 @@ -34022,9 +34225,9 @@ xref: CL:0000020 xref: TAO:0001337 xref: TAO:0009007 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005882 ! spermatogenic cyst -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009009 @@ -34035,8 +34238,8 @@ xref: CL:0000029 xref: TAO:0009009 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009010 @@ -34049,8 +34252,8 @@ xref: TAO:0009010 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009011 @@ -34061,8 +34264,8 @@ synonym: "neuroblasts" EXACT PLURAL [] xref: CL:0000031 xref: TAO:0009011 is_a: ZFA:0009019 ! neuronal stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009012 @@ -34073,8 +34276,8 @@ synonym: "neuroplacodal cells" EXACT PLURAL [] xref: CL:0000032 xref: TAO:0009012 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009013 @@ -34085,8 +34288,8 @@ synonym: "single fate stem cells" EXACT PLURAL [] xref: CL:0000035 xref: TAO:0009013 is_a: ZFA:0009307 ! somatic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009014 @@ -34103,9 +34306,9 @@ xref: CL:0000037 xref: TAO:0009014 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009258 ! angioblastic mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009015 @@ -34123,8 +34326,8 @@ xref: CL:0000038 xref: TAO:0009015 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009016 @@ -34136,8 +34339,8 @@ synonym: "germ line cells" EXACT PLURAL [] xref: CL:0000039 xref: TAO:0009016 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009017 @@ -34152,8 +34355,8 @@ xref: CL:0000040 xref: TAO:0009017 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009018 @@ -34166,8 +34369,8 @@ xref: CL:0000042 xref: TAO:0009018 is_a: ZFA:0009353 ! myeloblast relationship: develops_from ZFA:0009352 ! neutrophil progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009019 @@ -34179,8 +34382,8 @@ xref: CL:0000047 xref: TAO:0009019 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009020 @@ -34192,8 +34395,8 @@ synonym: "multipotent stem cell" EXACT [] xref: CL:0000048 xref: TAO:0009020 is_a: ZFA:0009307 ! somatic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009021 @@ -34210,8 +34413,8 @@ xref: CL:0000049 xref: TAO:0009021 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009022 @@ -34225,8 +34428,8 @@ xref: CL:0000050 xref: TAO:0009022 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009023 @@ -34244,8 +34447,8 @@ xref: CL:0000051 xref: TAO:0009023 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009024 @@ -34257,8 +34460,8 @@ synonym: "totipotent stem cells" EXACT PLURAL [] xref: CL:0000052 xref: TAO:0009024 is_a: ZFA:0009307 ! somatic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009025 @@ -34271,8 +34474,8 @@ xref: CL:0000056 xref: TAO:0009025 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009179 ! muscle stem cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009026 @@ -34286,8 +34489,8 @@ xref: CL:0000057 xref: TAO:0009026 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009027 @@ -34302,9 +34505,9 @@ is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001501 ! cartilage element -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009028 @@ -34317,8 +34520,8 @@ xref: CL:0000059 xref: TAO:0009028 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009029 @@ -34331,9 +34534,9 @@ xref: CL:0000060 xref: TAO:0009029 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005141 ! tooth pulp -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009030 @@ -34345,9 +34548,9 @@ synonym: "cementoblasts" EXACT PLURAL [] xref: CL:0000061 xref: TAO:0009030 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009031 @@ -34361,8 +34564,8 @@ xref: TAO:0009031 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: develops_from ZFA:0009184 ! osteoprogenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009032 @@ -34373,8 +34576,8 @@ synonym: "ciliated cells" EXACT PLURAL [] xref: CL:0000064 xref: TAO:0009032 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009033 @@ -34387,9 +34590,9 @@ xref: CL:0000065 xref: TAO:0009033 is_a: ZFA:0009035 ! ciliated epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009034 @@ -34401,9 +34604,9 @@ synonym: "epithelial cells" EXACT PLURAL [] xref: CL:0000066 xref: TAO:0009034 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001486 ! epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009035 @@ -34415,8 +34618,8 @@ xref: CL:0000067 xref: TAO:0009035 is_a: ZFA:0009032 ! ciliated cell is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009036 @@ -34430,9 +34633,9 @@ is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0005773 ! embryonic blood vessel endothelial progenitor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005257 ! blood vessel endothelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009037 @@ -34443,8 +34646,8 @@ synonym: "barrier epithelial cells" EXACT PLURAL [] xref: CL:0000073 xref: TAO:0009037 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009038 @@ -34455,8 +34658,8 @@ synonym: "columnar/cuboidal epithelial cells" EXACT PLURAL [] xref: CL:0000075 xref: TAO:0009038 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009039 @@ -34467,8 +34670,8 @@ synonym: "squamous epithelial cells" EXACT PLURAL [] xref: CL:0000076 xref: TAO:0009039 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009040 @@ -34481,8 +34684,8 @@ xref: TAO:0009040 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009130 ! lining cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009041 @@ -34493,8 +34696,8 @@ synonym: "peridermal cells" EXACT PLURAL [] xref: CL:0000078 xref: TAO:0009041 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009042 @@ -34506,8 +34709,8 @@ xref: CL:0000079 xref: TAO:0009042 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009180 ! stratified epithelial stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009043 @@ -34519,8 +34722,8 @@ synonym: "circulating cells" EXACT PLURAL [] xref: CL:0000080 xref: TAO:0009043 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009044 @@ -34532,9 +34735,9 @@ synonym: "blood cells" EXACT PLURAL [] xref: CL:0000081 xref: TAO:0009044 is_a: ZFA:0005830 ! hematopoietic cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000007 ! blood -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009045 @@ -34546,8 +34749,8 @@ xref: CL:0000083 xref: TAO:0009045 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009139 ! endodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009046 @@ -34575,8 +34778,8 @@ xref: TAO:0009340 xref: TAO:0009341 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009350 ! pro-T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009047 @@ -34590,8 +34793,8 @@ xref: CL:0000092 xref: TAO:0009047 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009265 ! monocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009048 @@ -34603,8 +34806,8 @@ synonym: "granulocytes" EXACT PLURAL [] xref: CL:0000094 xref: TAO:0009048 is_a: ZFA:0009326 ! myeloid leukocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009049 @@ -34629,8 +34832,8 @@ xref: TAO:0009049 is_a: ZFA:0009327 ! neutrophil relationship: develops_from ZFA:0009254 ! band form neutrophil relationship: develops_from ZFA:0009328 ! immature neutrophil -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009050 @@ -34642,8 +34845,8 @@ xref: CL:0000098 xref: TAO:0009050 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009051 @@ -34655,8 +34858,8 @@ synonym: "interneurons" EXACT PLURAL [] xref: CL:0000099 xref: TAO:0009051 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009052 @@ -34668,8 +34871,8 @@ synonym: "motoneuron" EXACT [] xref: CL:0000100 xref: TAO:0009052 is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009053 @@ -34680,8 +34883,8 @@ subset: cell_slim xref: CL:0000101 xref: TAO:0009053 is_a: ZFA:0009238 ! afferent neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009054 @@ -34692,8 +34895,8 @@ synonym: "polymodal neurons" EXACT PLURAL [] xref: CL:0000102 xref: TAO:0009054 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009055 @@ -34705,9 +34908,9 @@ synonym: "bipolar neurons" EXACT PLURAL [] xref: CL:0000103 xref: TAO:0009055 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009056 @@ -34718,8 +34921,8 @@ synonym: "multipolar neurons" EXACT PLURAL [] xref: CL:0000104 xref: TAO:0009056 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009057 @@ -34730,8 +34933,8 @@ synonym: "pseudounipolar neurons" EXACT PLURAL [] xref: CL:0000105 xref: TAO:0009057 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009058 @@ -34742,8 +34945,8 @@ synonym: "unipolar neurons" EXACT PLURAL [] xref: CL:0000106 xref: TAO:0009058 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009059 @@ -34755,9 +34958,9 @@ xref: CL:0000107 xref: TAO:0009059 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001574 ! autonomic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009060 @@ -34769,8 +34972,8 @@ synonym: "cholinergic neurons" EXACT PLURAL [] xref: CL:0000108 xref: TAO:0009060 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009061 @@ -34781,8 +34984,8 @@ synonym: "adrenergic neurons" EXACT PLURAL [] xref: CL:0000109 xref: TAO:0009061 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009062 @@ -34793,8 +34996,8 @@ synonym: "peptidergic neurons" EXACT PLURAL [] xref: CL:0000110 xref: TAO:0009062 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009063 @@ -34806,8 +35009,8 @@ xref: CL:0000111 xref: TAO:0009063 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009064 @@ -34819,8 +35022,8 @@ synonym: "mononuclear phagocytes" EXACT PLURAL [] xref: CL:0000113 xref: TAO:0009064 is_a: ZFA:0009357 ! mononuclear cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009065 @@ -34831,8 +35034,8 @@ synonym: "endothelial cells" EXACT PLURAL [] xref: CL:0000115 xref: TAO:0009065 is_a: ZFA:0009130 ! lining cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009066 @@ -34844,9 +35047,9 @@ subset: cell_slim xref: CL:0000116 xref: TAO:0009066 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000048 ! olfactory placode -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009067 @@ -34858,8 +35061,8 @@ xref: CL:0000117 xref: TAO:0009067 is_a: ZFA:0009248 ! neuron relationship: develops_from ZFA:0009168 ! neuroblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009068 @@ -34870,8 +35073,8 @@ synonym: "basket cells" EXACT PLURAL [] xref: CL:0000118 xref: TAO:0009068 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009069 @@ -34882,8 +35085,8 @@ synonym: "Golgi cells" EXACT PLURAL [] xref: CL:0000119 xref: TAO:0009069 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009070 @@ -34894,9 +35097,9 @@ synonym: "granule cells" EXACT PLURAL [] xref: CL:0000120 xref: TAO:0009070 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009071 @@ -34909,10 +35112,10 @@ xref: CL:0000121 xref: TAO:0009071 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001706 ! Purkinje cell layer corpus cerebelli relationship: part_of ZFA:0001709 ! Purkinje cell layer valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009072 @@ -34923,8 +35126,8 @@ synonym: "stellate cells" EXACT PLURAL [] xref: CL:0000122 xref: TAO:0009072 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009073 @@ -34938,9 +35141,9 @@ xref: CL:0000125 xref: TAO:0009073 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009010 ! glioblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009074 @@ -34952,8 +35155,8 @@ xref: CL:0000126 xref: TAO:0009074 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009075 @@ -34965,8 +35168,8 @@ synonym: "astrocytes" EXACT PLURAL [] xref: CL:0000127 xref: TAO:0009075 is_a: ZFA:0009074 ! macroglial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009076 @@ -34979,8 +35182,8 @@ xref: CL:0000128 xref: TAO:0009076 is_a: ZFA:0009074 ! macroglial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009077 @@ -34992,8 +35195,8 @@ synonym: "microglia" EXACT [] xref: CL:0000129 xref: TAO:0009077 is_a: ZFA:0009141 ! macrophage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009078 @@ -35006,9 +35209,9 @@ xref: TAO:0009078 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009139 ! endodermal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009079 @@ -35022,9 +35225,9 @@ xref: TAO:0009079 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001687 ! corneal endothelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009080 @@ -35036,8 +35239,8 @@ xref: CL:0000133 xref: TAO:0009080 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009137 ! ectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009081 @@ -35050,8 +35253,8 @@ xref: CL:0000134 xref: TAO:0009081 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009082 @@ -35069,9 +35272,9 @@ xref: TAO:0009082 xref: TAO:0009208 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005345 ! adipose tissue -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0009083 @@ -35084,9 +35287,9 @@ xref: CL:0000137 xref: TAO:0009083 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009031 ! osteoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009084 @@ -35100,9 +35303,9 @@ xref: TAO:0009084 is_a: ZFA:0009093 ! GAG secreting cell is_a: ZFA:0009287 ! collagen secreting cell relationship: develops_from ZFA:0009027 ! chondroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001501 ! cartilage element -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009085 @@ -35115,8 +35318,8 @@ xref: CL:0000059 xref: TAO:0009085 is_a: ZFA:0009089 ! simple columnar epithelial cell relationship: develops_from ZFA:0009028 ! ameloblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009086 @@ -35129,8 +35332,8 @@ xref: TAO:0009086 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009029 ! odontoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009087 @@ -35144,9 +35347,9 @@ xref: TAO:0009087 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009030 ! cementoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009088 @@ -35159,8 +35362,8 @@ synonym: "APC" EXACT [] xref: CL:0000145 xref: TAO:0009088 is_a: ZFA:0009309 ! leukocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009089 @@ -35171,8 +35374,8 @@ synonym: "simple columnar epithelial cells" EXACT PLURAL [] xref: CL:0000146 xref: TAO:0009089 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009090 @@ -35185,8 +35388,8 @@ synonym: "chromatophore" EXACT [] xref: CL:0000147 xref: TAO:0009090 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009091 @@ -35200,10 +35403,10 @@ xref: CL:0000148 xref: TAO:0009091 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0009249 ! melanoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0005915 ! iris melanophore layer -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009092 @@ -35215,8 +35418,8 @@ synonym: "exocrine cells" EXACT PLURAL [] xref: CL:0000152 xref: TAO:0009092 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009093 @@ -35227,8 +35430,8 @@ synonym: "hyaluronic acid secreting cell" EXACT [] xref: CL:0000153 xref: TAO:0009093 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009094 @@ -35240,9 +35443,9 @@ synonym: "chalice cell" EXACT [] xref: CL:0000160 xref: TAO:0009094 is_a: ZFA:0009159 ! mucus secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001486 ! epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009095 @@ -35253,8 +35456,8 @@ synonym: "acid secreting cells" EXACT PLURAL [] xref: CL:0000161 xref: TAO:0009095 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009096 @@ -35266,9 +35469,9 @@ synonym: "endocrine cells" EXACT PLURAL [] xref: CL:0000163 xref: TAO:0009096 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009097 @@ -35280,8 +35483,8 @@ synonym: "enteroendocrine cells" EXACT PLURAL [] xref: CL:0000164 xref: TAO:0009097 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009098 @@ -35294,8 +35497,8 @@ xref: CL:0000165 xref: TAO:0009098 is_a: ZFA:0009096 ! endocrine cell is_a: ZFA:0009190 ! electrically responsive cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009099 @@ -35308,8 +35511,8 @@ xref: CL:0000166 xref: TAO:0009099 is_a: ZFA:0009098 ! neuroendocrine cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009100 @@ -35320,8 +35523,8 @@ synonym: "peptide hormone secreting cells" EXACT PLURAL [] xref: CL:0000167 xref: TAO:0009100 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009101 @@ -35332,8 +35535,8 @@ synonym: "insulin secreting cells" EXACT PLURAL [] xref: CL:0000168 xref: TAO:0009101 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009102 @@ -35344,9 +35547,9 @@ synonym: "beta cell" EXACT [] xref: CL:0000169 xref: TAO:0009102 is_a: ZFA:0009101 ! insulin secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009103 @@ -35357,8 +35560,8 @@ synonym: "glucagon secreting cells" EXACT PLURAL [] xref: CL:0000170 xref: TAO:0009103 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009104 @@ -35369,9 +35572,9 @@ synonym: "alpha cell" EXACT [] xref: CL:0000171 xref: TAO:0009104 is_a: ZFA:0009103 ! glucagon secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009105 @@ -35382,8 +35585,8 @@ synonym: "somatostatin secreting cells" EXACT PLURAL [] xref: CL:0000172 xref: TAO:0009105 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009106 @@ -35394,8 +35597,8 @@ synonym: "steroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000174 xref: TAO:0009106 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009107 @@ -35406,8 +35609,8 @@ synonym: "testosterone secreting cells" EXACT PLURAL [] xref: CL:0000177 xref: TAO:0009107 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009108 @@ -35419,8 +35622,8 @@ synonym: "interstitial cell" EXACT [] xref: CL:0000178 xref: TAO:0009108 is_a: ZFA:0009107 ! testosterone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009109 @@ -35431,8 +35634,8 @@ synonym: "progesterone secreting cells" EXACT PLURAL [] xref: CL:0000179 xref: TAO:0009109 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009110 @@ -35443,8 +35646,8 @@ synonym: "estradiol secreting cells" EXACT PLURAL [] xref: CL:0000180 xref: TAO:0009110 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009111 @@ -35457,9 +35660,9 @@ xref: CL:0000182 xref: TAO:0009111 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009398 ! hepatoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009112 @@ -35473,8 +35676,8 @@ synonym: "perivascular cells" EXACT [] xref: CL:0000669 xref: TAO:0009112 is_a: ZFA:0005944 ! mural cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009113 @@ -35486,8 +35689,8 @@ xref: CL:0000185 xref: TAO:0009113 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009114 @@ -35501,9 +35704,9 @@ xref: CL:0000187 xref: TAO:0009114 is_a: ZFA:0009190 ! electrically responsive cell relationship: develops_from ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005145 ! muscle -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009115 @@ -35517,9 +35720,9 @@ xref: TAO:0009115 is_a: ZFA:0005784 ! striated muscle cell is_a: ZFA:0009114 ! muscle cell relationship: develops_from ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005277 ! skeletal muscle -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009116 @@ -35535,8 +35738,8 @@ xref: TAO:0009116 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0001373 ! migratory slow muscle precursor cell relationship: develops_from ZFA:0009368 ! slow muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009117 @@ -35551,8 +35754,8 @@ xref: CL:0000190 xref: TAO:0009117 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0009369 ! fast muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0009118 @@ -35564,9 +35767,9 @@ synonym: "non-striated muscle cell" EXACT [] xref: CL:0000192 xref: TAO:0009118 is_a: ZFA:0009114 ! muscle cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005274 ! smooth muscle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009119 @@ -35579,8 +35782,8 @@ synonym: "nocireceptor" EXACT [] xref: CL:0000198 xref: TAO:0009119 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009120 @@ -35592,8 +35795,8 @@ synonym: "mechanoreceptor cells" EXACT PLURAL [] xref: CL:0000199 xref: TAO:0009120 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009121 @@ -35607,8 +35810,8 @@ synonym: "auditory receptor cells" EXACT PLURAL [] xref: CL:0000202 xref: TAO:0009121 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009122 @@ -35627,8 +35830,8 @@ synonym: "thermoreceptor cells" EXACT PLURAL [] xref: CL:0000205 xref: TAO:0009123 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009124 @@ -35640,8 +35843,8 @@ synonym: "chemoreceptor cells" EXACT PLURAL [] xref: CL:0000206 xref: TAO:0009124 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009125 @@ -35654,9 +35857,9 @@ synonym: "Schultze's cell" EXACT [] xref: CL:0000207 xref: TAO:0009125 is_a: ZFA:0009124 ! chemoreceptor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009126 @@ -35667,9 +35870,9 @@ synonym: "taste receptor cells" EXACT PLURAL [] xref: CL:0000209 xref: TAO:0009126 is_a: ZFA:0009124 ! chemoreceptor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001074 ! taste bud -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009127 @@ -35681,8 +35884,8 @@ synonym: "photoreceptor cells" EXACT PLURAL [] xref: CL:0000210 xref: TAO:0009127 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009128 @@ -35694,8 +35897,8 @@ synonym: "electrically active cells" EXACT PLURAL [] xref: CL:0000211 xref: TAO:0009128 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009129 @@ -35707,8 +35910,8 @@ synonym: "absorptive cells" EXACT PLURAL [] xref: CL:0000212 xref: TAO:0009129 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009130 @@ -35720,8 +35923,8 @@ synonym: "boundary cell" EXACT [] xref: CL:0000213 xref: TAO:0009130 is_a: ZFA:0009132 ! barrier cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009131 @@ -35734,9 +35937,9 @@ xref: TAO:0009131 is_a: ZFA:0009093 ! GAG secreting cell is_a: ZFA:0009130 ! lining cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005153 ! synovial joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009132 @@ -35748,8 +35951,8 @@ synonym: "barrier cells" EXACT PLURAL [] xref: CL:0000215 xref: TAO:0009132 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009133 @@ -35761,9 +35964,9 @@ synonym: "Sertoli cells" EXACT PLURAL [] xref: CL:0000216 xref: TAO:0009133 is_a: ZFA:0009132 ! barrier cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005882 ! spermatogenic cyst -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0009134 @@ -35774,8 +35977,8 @@ synonym: "insulating cells" EXACT PLURAL [] xref: CL:0000217 xref: TAO:0009134 is_a: ZFA:0009132 ! barrier cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009135 @@ -35790,9 +35993,9 @@ is_a: ZFA:0009134 ! insulating cell is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) is_a: ZFA:0009163 ! myelin accumulating cell relationship: develops_from ZFA:0001725 ! immature Schwann cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009136 @@ -35804,8 +36007,8 @@ synonym: "motile cells" EXACT PLURAL [] xref: CL:0000219 xref: TAO:0009136 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009137 @@ -35817,9 +36020,9 @@ synonym: "ectoderm cell" EXACT [] xref: CL:0000221 xref: TAO:0009137 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009138 @@ -35832,9 +36035,9 @@ synonym: "mesoderm cell" EXACT [] xref: CL:0000222 xref: TAO:0009138 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009139 @@ -35846,9 +36049,9 @@ synonym: "endoderm cell" EXACT [] xref: CL:0000223 xref: TAO:0009139 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000017 ! endoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009140 @@ -35860,8 +36063,8 @@ synonym: "phagocytes" EXACT PLURAL [] xref: CL:0000234 xref: TAO:0009140 is_a: ZFA:0009136 ! motile cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009141 @@ -35875,9 +36078,9 @@ xref: TAO:0009141 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009265 ! monocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009142 @@ -35892,8 +36095,8 @@ xref: CL:0000236 xref: TAO:0009142 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009349 ! pro-B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009143 @@ -35904,8 +36107,8 @@ synonym: "brush border epithelial cells" EXACT PLURAL [] xref: CL:0000239 xref: TAO:0009143 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009144 @@ -35916,8 +36119,8 @@ synonym: "stratified squamous epithelial cells" EXACT PLURAL [] xref: CL:0000240 xref: TAO:0009144 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009145 @@ -35928,8 +36131,8 @@ synonym: "stratified cuboidal epithelial cells" EXACT PLURAL [] xref: CL:0000241 xref: TAO:0009145 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009146 @@ -35941,8 +36144,8 @@ synonym: "Merkel cells" EXACT PLURAL [] xref: CL:0000242 xref: TAO:0009146 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009147 @@ -35955,8 +36158,8 @@ xref: CL:0000243 xref: TAO:0009147 is_a: ZFA:0009073 ! glial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009148 @@ -35967,8 +36170,8 @@ synonym: "transitional epithelial cells" EXACT PLURAL [] xref: CL:0000244 xref: TAO:0009148 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009149 @@ -35982,10 +36185,10 @@ xref: CL:0000246 xref: TAO:0009149 is_a: ZFA:0005865 ! reticulospinal neuron is_a: ZFA:0009194 ! CNS short range interneuron -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009150 @@ -36000,8 +36203,8 @@ synonym: "Rohon-Beard neurons" EXACT PLURAL [] xref: CL:0000247 xref: TAO:0009150 is_a: ZFA:0009053 ! sensory neuron -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009151 @@ -36012,8 +36215,8 @@ synonym: "hatching gland cells" EXACT PLURAL [] xref: CL:0000249 xref: TAO:0009151 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009152 @@ -36024,8 +36227,8 @@ synonym: "extramedullary cells" EXACT PLURAL [] xref: CL:0000251 xref: TAO:0009152 is_a: ZFA:0009053 ! sensory neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009153 @@ -36036,9 +36239,9 @@ synonym: "eurydendroid cells" EXACT PLURAL [] xref: CL:0000253 xref: TAO:0009153 is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009154 @@ -36049,10 +36252,10 @@ synonym: "eye photoreceptor cells" EXACT PLURAL [] xref: CL:0000287 xref: TAO:0009154 is_a: ZFA:0009127 ! photoreceptor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer relationship: part_of ZFA:0001464 ! retinal outer nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009155 @@ -36069,9 +36272,9 @@ synonym: "somatrophic cell" RELATED [] xref: CL:0000295 xref: TAO:0009155 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009156 @@ -36083,9 +36286,9 @@ synonym: "gametes" EXACT PLURAL [] xref: CL:0000300 xref: TAO:0009156 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000413 ! gonad -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0009157 @@ -36096,8 +36299,8 @@ synonym: "keratin accumulating cells" EXACT PLURAL [] xref: CL:0000311 xref: TAO:0009157 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009158 @@ -36110,8 +36313,8 @@ xref: CL:0000312 xref: TAO:0009158 is_a: ZFA:0009157 ! keratin accumulating cell relationship: develops_from ZFA:0007124 ! keratinocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009159 @@ -36123,10 +36326,10 @@ synonym: "mucous cell" EXACT [] xref: CL:0000319 xref: TAO:0009159 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009160 @@ -36137,8 +36340,8 @@ synonym: "seminal fluid secreting cells" EXACT PLURAL [] xref: CL:0000321 xref: TAO:0009160 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009161 @@ -36160,8 +36363,8 @@ synonym: "extracellular matrix secreting cells" EXACT PLURAL [] xref: CL:0000327 xref: TAO:0009162 is_a: ZFA:0009226 ! stromal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009163 @@ -36172,8 +36375,8 @@ synonym: "myelin accumulating cells" EXACT PLURAL [] xref: CL:0000328 xref: TAO:0009163 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009164 @@ -36184,8 +36387,8 @@ synonym: "oxygen accumulating cells" EXACT PLURAL [] xref: CL:0000329 xref: TAO:0009164 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009165 @@ -36195,9 +36398,9 @@ def: "A cell of the neural crest. The neural crest is a strip of specialized ect subset: cell_slim synonym: "neural crest cells" EXACT PLURAL [] is_a: ZFA:0007089 ! embryonic cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000045 ! neural crest -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009166 @@ -36209,8 +36412,8 @@ xref: CL:0000335 xref: TAO:0009166 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009167 @@ -36222,8 +36425,8 @@ xref: CL:0000336 xref: TAO:0009167 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009168 @@ -36233,8 +36436,8 @@ subset: cell_slim xref: CL:0000337 xref: TAO:0009168 is_a: ZFA:0009011 ! neuroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009169 @@ -36245,8 +36448,8 @@ synonym: "glioblasts (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000339 xref: TAO:0009169 is_a: ZFA:0009010 ! glioblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009170 @@ -36257,8 +36460,8 @@ synonym: "pigment cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000342 xref: TAO:0009170 is_a: ZFA:0009090 ! pigment cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009171 @@ -36269,9 +36472,9 @@ synonym: "visual pigment cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000343 xref: TAO:0009171 is_a: ZFA:0009170 ! pigment cell (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009172 @@ -36294,9 +36497,9 @@ xref: CL:0000345 xref: TAO:0009173 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005140 ! dental papilla -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009174 @@ -36309,9 +36512,9 @@ xref: CL:0000347 xref: TAO:0009174 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005563 ! sclera -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009175 @@ -36324,8 +36527,8 @@ xref: CL:0000348 xref: TAO:0009175 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009176 @@ -36336,8 +36539,8 @@ synonym: "extraembryonic cells" EXACT PLURAL [] xref: CL:0000349 xref: TAO:0009176 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009177 @@ -36349,9 +36552,9 @@ synonym: "blastomere" RELATED [] xref: CL:0000353 xref: TAO:0009177 is_a: ZFA:0009002 ! early embryonic cell -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0009178 @@ -36362,8 +36565,8 @@ synonym: "blastemal cells" EXACT PLURAL [] xref: CL:0000354 xref: TAO:0009178 is_a: ZFA:0009020 ! multi fate stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009179 @@ -36375,8 +36578,8 @@ xref: CL:0000355 xref: TAO:0009179 is_a: ZFA:0009013 ! single fate stem cell is_a: ZFA:0009291 ! muscle precursor cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009180 @@ -36387,8 +36590,8 @@ synonym: "stratified epithelial stem cells" EXACT PLURAL [] xref: CL:0000357 xref: TAO:0009180 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009181 @@ -36400,8 +36603,8 @@ xref: CL:0000359 xref: TAO:0009181 is_a: ZFA:0005944 ! mural cell is_a: ZFA:0009118 ! smooth muscle cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009182 @@ -36413,8 +36616,8 @@ synonym: "gastrula cells" EXACT PLURAL [] xref: CL:0000361 xref: TAO:0009182 is_a: ZFA:0009002 ! early embryonic cell -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0009183 @@ -36426,8 +36629,8 @@ synonym: "epidermal cells" EXACT PLURAL [] xref: CL:0000362 xref: TAO:0009183 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009184 @@ -36439,8 +36642,8 @@ xref: CL:0000375 xref: TAO:0009184 is_a: ZFA:0009013 ! single fate stem cell relationship: develops_from ZFA:0009166 ! mesenchyme condensation cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009185 @@ -36451,8 +36654,8 @@ synonym: "sensory processing neurons" EXACT PLURAL [] xref: CL:0000379 xref: TAO:0009185 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009186 @@ -36463,8 +36666,8 @@ synonym: "neurosecretory neurons" EXACT PLURAL [] xref: CL:0000381 xref: TAO:0009186 is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009187 @@ -36476,8 +36679,8 @@ xref: CL:0000383 xref: TAO:0009187 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009188 @@ -36488,9 +36691,9 @@ synonym: "ligament cells" EXACT PLURAL [] xref: CL:0000384 xref: TAO:0009188 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001675 ! ligament -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009189 @@ -36501,8 +36704,8 @@ synonym: "muscle attachment cell" EXACT [] xref: CL:0000388 xref: TAO:0009189 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009190 @@ -36514,8 +36717,8 @@ synonym: "electrically responsive cells" EXACT PLURAL [] xref: CL:0000393 xref: TAO:0009190 is_a: ZFA:0009128 ! electrically active cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009191 @@ -36528,8 +36731,8 @@ xref: CL:0000402 xref: TAO:0009191 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009193 @@ -36541,8 +36744,8 @@ synonym: "electrically signaling cells" EXACT PLURAL [] xref: CL:0000404 xref: TAO:0009193 is_a: ZFA:0009128 ! electrically active cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009194 @@ -36553,8 +36756,8 @@ synonym: "CNS short range interneurons" EXACT PLURAL [] xref: CL:0000406 xref: TAO:0009194 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009195 @@ -36565,8 +36768,8 @@ synonym: "CNS long range interneurons" EXACT PLURAL [] xref: CL:0000410 xref: TAO:0009195 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009196 @@ -36577,8 +36780,8 @@ synonym: "hypodermal cells" EXACT PLURAL [] xref: CL:0000411 xref: TAO:0009196 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009198 @@ -36591,9 +36794,9 @@ xref: CL:0000430 xref: TAO:0009198 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005245 ! xanthoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0009199 @@ -36608,11 +36811,11 @@ xref: CL:0000431 xref: TAO:0009199 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005328 ! iridoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0005914 ! argentum relationship: part_of ZFA:0005916 ! tapetum lucidum -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0009200 @@ -36623,8 +36826,8 @@ synonym: "reticular cells" EXACT PLURAL [] xref: CL:0000432 xref: TAO:0009200 is_a: ZFA:0009026 ! fibroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009201 @@ -36635,8 +36838,8 @@ synonym: "alkali secreting cells" EXACT PLURAL [] xref: CL:0000435 xref: TAO:0009201 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009202 @@ -36649,9 +36852,9 @@ synonym: "gonadotroph" EXACT [] xref: CL:0000437 xref: TAO:0009202 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009203 @@ -36664,9 +36867,9 @@ synonym: "gonadotroph" RELATED [] xref: CL:0000438 xref: TAO:0009203 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009204 @@ -36685,9 +36888,9 @@ synonym: "mammotropic cell" EXACT [] xref: CL:0000439 xref: TAO:0009204 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005580 ! rostral pars anterior -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009205 @@ -36700,9 +36903,9 @@ synonym: "melanotroph" EXACT [] xref: CL:0000440 xref: TAO:0009205 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001197 ! pars intermedia -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009206 @@ -36713,8 +36916,8 @@ synonym: "calcitonin secreting cells" EXACT PLURAL [] xref: CL:0000443 xref: TAO:0009206 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009207 @@ -36724,8 +36927,8 @@ subset: cell_slim synonym: "chief cell" EXACT [] xref: TAO:0009207 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009209 @@ -36738,8 +36941,8 @@ synonym: "veiled cell" RELATED [] xref: CL:0000451 xref: TAO:0009209 is_a: ZFA:0009088 ! professional antigen presenting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009210 @@ -36750,8 +36953,8 @@ synonym: "thyroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000452 xref: TAO:0009210 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009211 @@ -36762,8 +36965,8 @@ synonym: "epinephrin secreting cells" EXACT PLURAL [] xref: CL:0000454 xref: TAO:0009211 is_a: ZFA:0009212 ! biogenic amine secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009212 @@ -36774,8 +36977,8 @@ synonym: "biogenic amine secreting cells" EXACT PLURAL [] xref: CL:0000457 xref: TAO:0009212 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009213 @@ -36786,8 +36989,8 @@ synonym: "serotin secreting cells" EXACT PLURAL [] xref: CL:0000458 xref: TAO:0009213 is_a: ZFA:0009212 ! biogenic amine secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009214 @@ -36800,8 +37003,8 @@ synonym: "norepinephrin secreting cells" EXACT PLURAL [] xref: CL:0000459 xref: TAO:0009214 is_a: ZFA:0009212 ! biogenic amine secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009215 @@ -36812,8 +37015,8 @@ synonym: "glucocorticoid secreting cells" EXACT PLURAL [] xref: CL:0000460 xref: TAO:0009215 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009216 @@ -36829,9 +37032,9 @@ synonym: "corticotropin hormone secreting cell" EXACT [] xref: CL:0000467 xref: TAO:0009216 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005580 ! rostral pars anterior -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009217 @@ -36842,9 +37045,9 @@ synonym: "digestive enzyme secreting cells" EXACT PLURAL [] xref: CL:0000470 xref: TAO:0009217 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009218 @@ -36858,9 +37061,9 @@ synonym: "thyrotroph" EXACT [] xref: CL:0000476 xref: TAO:0009218 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009219 @@ -36871,8 +37074,8 @@ synonym: "visible light photoreceptor cells" EXACT PLURAL [] xref: CL:0000488 xref: TAO:0009219 is_a: ZFA:0009127 ! photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009220 @@ -36883,8 +37086,8 @@ synonym: "photopic photoreceptor cells" EXACT PLURAL [] xref: CL:0000490 xref: TAO:0009220 is_a: ZFA:0009219 ! visible light photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009221 @@ -36895,8 +37098,8 @@ synonym: "UV sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000494 xref: TAO:0009221 is_a: ZFA:0009127 ! photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009222 @@ -36907,8 +37110,8 @@ synonym: "blue sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000495 xref: TAO:0009222 is_a: ZFA:0009220 ! photopic photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009223 @@ -36919,8 +37122,8 @@ synonym: "green sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000496 xref: TAO:0009223 is_a: ZFA:0009220 ! photopic photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009224 @@ -36931,8 +37134,8 @@ synonym: "red sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000497 xref: TAO:0009224 is_a: ZFA:0009220 ! photopic photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009225 @@ -36943,8 +37146,8 @@ synonym: "inhibitory interneurons" EXACT PLURAL [] xref: CL:0000498 xref: TAO:0009225 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009226 @@ -36957,8 +37160,8 @@ xref: CL:0000499 xref: TAO:0009226 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009227 @@ -36970,8 +37173,8 @@ synonym: "granulosa cells" EXACT PLURAL [] xref: CL:0000501 xref: TAO:0009227 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009228 @@ -36984,9 +37187,9 @@ xref: CL:0000502 xref: TAO:0009228 is_a: ZFA:0009097 ! enteroendocrine cell is_a: ZFA:0009105 ! somatostatin secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009229 @@ -36999,8 +37202,8 @@ xref: CL:0000503 xref: TAO:0009229 is_a: ZFA:0009226 ! stromal cell is_a: ZFA:0009271 ! androgen secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009230 @@ -37011,8 +37214,8 @@ synonym: "substance P secreting cells" EXACT PLURAL [] xref: CL:0000505 xref: TAO:0009230 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009231 @@ -37023,8 +37226,8 @@ synonym: "enkephalin secreting cells" EXACT PLURAL [] xref: CL:0000506 xref: TAO:0009231 is_a: ZFA:0009232 ! endorphin secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009232 @@ -37035,8 +37238,8 @@ synonym: "endorphin secreting cells" EXACT PLURAL [] xref: CL:0000507 xref: TAO:0009232 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009233 @@ -37047,8 +37250,8 @@ synonym: "paracrine cells" EXACT PLURAL [] xref: CL:0000512 xref: TAO:0009233 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009234 @@ -37060,8 +37263,8 @@ synonym: "cardioblast" RELATED [] xref: CL:0000513 xref: TAO:0009234 is_a: ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009235 @@ -37073,8 +37276,8 @@ synonym: "satellite cell" RELATED [] xref: CL:0000514 xref: TAO:0009235 is_a: ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009236 @@ -37086,8 +37289,8 @@ synonym: "skeletal muscle myoblasts" EXACT PLURAL [] xref: CL:0000515 xref: TAO:0009236 is_a: ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009237 @@ -37100,8 +37303,8 @@ xref: CL:0000516 xref: TAO:0009237 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009238 @@ -37114,8 +37317,8 @@ xref: CL:0000526 xref: TAO:0009238 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009239 @@ -37128,8 +37331,8 @@ xref: CL:0000527 xref: TAO:0009239 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009240 @@ -37141,8 +37344,8 @@ synonym: "nitrergic neurons" EXACT PLURAL [] xref: CL:0000528 xref: TAO:0009240 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009241 @@ -37154,8 +37357,8 @@ xref: CL:0000529 xref: TAO:0009241 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009242 @@ -37166,9 +37369,9 @@ subset: cell_slim xref: CL:0000530 xref: TAO:0009242 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001120 ! neuroectoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009243 @@ -37181,8 +37384,8 @@ synonym: "caudal primary motoneuron" EXACT [] xref: CL:0000532 xref: TAO:0009243 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009244 @@ -37196,8 +37399,8 @@ xref: CL:0000533 xref: TAO:0009244 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009245 @@ -37209,8 +37412,8 @@ xref: CL:0000534 xref: TAO:0009245 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009246 @@ -37221,8 +37424,8 @@ synonym: "secondary neurons" EXACT PLURAL [] xref: CL:0000535 xref: TAO:0009246 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009247 @@ -37236,8 +37439,8 @@ xref: CL:0000536 xref: TAO:0009247 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009246 ! secondary neuron -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009248 @@ -37251,9 +37454,9 @@ xref: TAO:0009248 is_a: ZFA:0009190 ! electrically responsive cell is_a: ZFA:0009193 ! electrically signaling cell relationship: develops_from ZFA:0009011 ! neuroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009249 @@ -37266,8 +37469,8 @@ xref: CL:0000541 xref: TAO:0009249 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009250 @@ -37280,8 +37483,8 @@ xref: CL:0000542 xref: TAO:0009250 is_a: ZFA:0009357 ! mononuclear cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009251 @@ -37297,8 +37500,8 @@ xref: CL:0000557 xref: TAO:0009251 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009252 @@ -37311,8 +37514,8 @@ xref: CL:0000558 xref: TAO:0009252 is_a: ZFA:0009044 ! blood cell is_a: ZFA:0009325 ! erythroid lineage cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009253 @@ -37325,8 +37528,8 @@ xref: CL:0000559 xref: TAO:0009253 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009017 ! monoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009254 @@ -37343,8 +37546,8 @@ xref: CL:0000560 xref: TAO:0009254 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009268 ! neutrophilic metamyelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009255 @@ -37356,9 +37559,9 @@ synonym: "amacrine neuron" EXACT [] xref: CL:0000561 xref: TAO:0009255 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009256 @@ -37371,8 +37574,8 @@ synonym: "red blood cell" EXACT [] xref: CL:0000562 xref: TAO:0009256 is_a: ZFA:0009044 ! blood cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009257 @@ -37387,8 +37590,8 @@ xref: CL:0000564 xref: TAO:0009257 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009018 ! neutrophilic myeloblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009258 @@ -37400,8 +37603,8 @@ xref: CL:0000566 xref: TAO:0009258 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009259 @@ -37415,8 +37618,8 @@ xref: TAO:0009259 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009260 @@ -37428,8 +37631,8 @@ xref: CL:0000570 xref: TAO:0009260 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009261 @@ -37443,9 +37646,9 @@ xref: CL:0000571 xref: TAO:0009261 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005329 ! leucoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009262 @@ -37457,8 +37660,8 @@ synonym: "retinal cone cells" EXACT PLURAL [] xref: CL:0000573 xref: TAO:0009262 is_a: ZFA:0009154 ! eye photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009263 @@ -37471,9 +37674,9 @@ xref: CL:0000574 xref: TAO:0009263 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005331 ! pigment erythroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009264 @@ -37484,8 +37687,8 @@ synonym: "corneal epithelial cells" EXACT PLURAL [] xref: CL:0000575 xref: TAO:0009264 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009265 @@ -37499,8 +37702,8 @@ xref: TAO:0009265 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009253 ! promonocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009266 @@ -37513,8 +37716,8 @@ xref: CL:0000580 xref: TAO:0009266 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009267 @@ -37526,8 +37729,8 @@ synonym: "peritoneal macrophages" EXACT PLURAL [] xref: CL:0000581 xref: TAO:0009267 is_a: ZFA:0009141 ! macrophage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009268 @@ -37540,8 +37743,8 @@ xref: CL:0000582 xref: TAO:0009268 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009266 ! neutrophilic myelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009269 @@ -37553,9 +37756,9 @@ synonym: "enterocytes" EXACT PLURAL [] xref: CL:0000584 xref: TAO:0009269 is_a: ZFA:0009143 ! brush border epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009270 @@ -37567,8 +37770,8 @@ synonym: "odontoclasts" EXACT PLURAL [] xref: CL:0000588 xref: TAO:0009270 is_a: ZFA:0009047 ! osteoclast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009271 @@ -37579,8 +37782,8 @@ synonym: "androgen secreting cells" EXACT PLURAL [] xref: CL:0000593 xref: TAO:0009271 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009272 @@ -37592,8 +37795,8 @@ synonym: "skeletal muscle satellite cells" EXACT PLURAL [] xref: CL:0000594 xref: TAO:0009272 is_a: ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009273 @@ -37605,8 +37808,8 @@ synonym: "pyramidal cells" EXACT PLURAL [] xref: CL:0000598 xref: TAO:0009273 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009274 @@ -37618,8 +37821,8 @@ synonym: "pressoreceptor cells" EXACT PLURAL [] xref: CL:0000602 xref: TAO:0009274 is_a: ZFA:0009370 ! stretch receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009275 @@ -37631,8 +37834,8 @@ synonym: "retinal rod cells" EXACT PLURAL [] xref: CL:0000604 xref: TAO:0009275 is_a: ZFA:0009154 ! eye photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009276 @@ -37644,8 +37847,8 @@ synonym: "GABAergic neurons" EXACT PLURAL [] xref: CL:0000617 xref: TAO:0009276 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009277 @@ -37657,8 +37860,8 @@ synonym: "acinar cells" EXACT PLURAL [] xref: CL:0000622 xref: TAO:0009277 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009278 @@ -37673,8 +37876,8 @@ xref: CL:0000623 xref: TAO:0009278 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009348 ! pro-NK cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009279 @@ -37687,8 +37890,8 @@ synonym: "perisinusoidal cell" EXACT [] xref: CL:0000632 xref: TAO:0009279 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009280 @@ -37701,9 +37904,9 @@ synonym: "Muller cells" EXACT PLURAL [] xref: CL:0000636 xref: TAO:0009280 is_a: ZFA:0009075 ! astrocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009281 @@ -37715,9 +37918,9 @@ synonym: "folliculostellate cells" EXACT PLURAL [] xref: CL:0000642 xref: TAO:0009281 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009282 @@ -37728,8 +37931,8 @@ synonym: "Bergmann glial cells" EXACT PLURAL [] xref: CL:0000644 xref: TAO:0009282 is_a: ZFA:0009075 ! astrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009283 @@ -37741,8 +37944,8 @@ xref: CL:0000650 xref: TAO:0009283 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009284 @@ -37753,9 +37956,9 @@ synonym: "pinealocytes" EXACT PLURAL [] xref: CL:0000652 xref: TAO:0009284 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000019 ! epiphysis -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009285 @@ -37766,9 +37969,9 @@ synonym: "podocytes" EXACT PLURAL [] xref: CL:0000653 xref: TAO:0009285 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000163 ! renal system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009286 @@ -37779,8 +37982,8 @@ synonym: "window cell" EXACT [] xref: CL:0000666 xref: TAO:0009286 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009287 @@ -37791,8 +37994,8 @@ synonym: "collagen secreting cells" EXACT PLURAL [] xref: CL:0000667 xref: TAO:0009287 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009288 @@ -37806,9 +38009,9 @@ xref: CL:0000670 xref: TAO:0009288 is_a: ZFA:0009016 ! germ line cell is_a: ZFA:0009136 ! motile cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0009289 @@ -37820,9 +38023,9 @@ synonym: "gut absorptive cells" EXACT PLURAL [] xref: CL:0000677 xref: TAO:0009289 is_a: ZFA:0009129 ! absorptive cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009290 @@ -37833,8 +38036,8 @@ synonym: "glutamatergic neurons" EXACT PLURAL [] xref: CL:0000679 xref: TAO:0009290 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009291 @@ -37847,8 +38050,8 @@ xref: TAO:0009291 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009292 @@ -37862,8 +38065,8 @@ xref: TAO:0009292 is_a: ZFA:0009168 ! neuroblast (sensu Vertebrata) relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009293 @@ -37875,8 +38078,8 @@ synonym: "M cells" EXACT PLURAL [] xref: CL:0000682 xref: TAO:0009293 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009294 @@ -37888,8 +38091,8 @@ synonym: "ependymoglial cells" EXACT PLURAL [] xref: CL:0000683 xref: TAO:0009294 is_a: ZFA:0009075 ! astrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009295 @@ -37901,8 +38104,8 @@ xref: CL:0000686 xref: TAO:0009295 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009296 @@ -37914,8 +38117,8 @@ synonym: "perijunctional fibroblasts" EXACT PLURAL [] xref: CL:0000688 xref: TAO:0009296 is_a: ZFA:0009026 ! fibroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009297 @@ -37926,8 +38129,8 @@ synonym: "stellate interneurons" EXACT PLURAL [] xref: CL:0000691 xref: TAO:0009297 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009298 @@ -37940,9 +38143,9 @@ xref: CL:0000692 xref: TAO:0009298 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009073 ! glial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009299 @@ -37954,8 +38157,8 @@ synonym: "spiderweb cell" EXACT [] xref: CL:0000693 xref: TAO:0009299 is_a: ZFA:0009297 ! stellate interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009300 @@ -37967,8 +38170,8 @@ synonym: "Cajal-Retzius cells" EXACT PLURAL [] xref: CL:0000695 xref: TAO:0009300 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009301 @@ -37980,8 +38183,8 @@ synonym: "dopaminergic neurons" EXACT PLURAL [] xref: CL:0000700 xref: TAO:0009301 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009302 @@ -37993,8 +38196,8 @@ synonym: "sustentacular cells" EXACT PLURAL [] xref: CL:0000703 xref: TAO:0009302 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009303 @@ -38006,8 +38209,8 @@ synonym: "endothelial tip cells" EXACT PLURAL [] xref: CL:0000704 xref: TAO:0009303 is_a: ZFA:0009036 ! blood vessel endothelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009304 @@ -38019,9 +38222,9 @@ synonym: "choroid plexus epithelial cells" EXACT PLURAL [] xref: CL:0000706 xref: TAO:0009304 is_a: ZFA:0009033 ! ependymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001443 ! choroid plexus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009305 @@ -38034,8 +38237,8 @@ synonym: "leptomeningeal cells" EXACT PLURAL [] xref: CL:0000708 xref: TAO:0009305 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009306 @@ -38047,22 +38250,22 @@ xref: CL:0000710 xref: TAO:0009306 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009307 name: somatic stem cell namespace: zebrafish_anatomy -def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:CJM] +def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:cjm] comment: Definition originally referred to GO:0048103. Changed to GOC: CJM to match other references. subset: cell_slim synonym: "somatic stem cells" EXACT PLURAL [] xref: CL:0000723 xref: TAO:0009307 -is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +is_a: ZFA:0005957 ! stem cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009308 @@ -38074,8 +38277,8 @@ synonym: "urothelial cells" EXACT PLURAL [] xref: CL:0000731 xref: TAO:0009308 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009309 @@ -38091,9 +38294,9 @@ xref: TAO:0009309 is_a: ZFA:0005830 ! hematopoietic cell is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009310 @@ -38106,9 +38309,9 @@ synonym: "RGC" EXACT [] xref: CL:0000740 xref: TAO:0009310 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000024 ! retinal ganglion cell layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009311 @@ -38120,8 +38323,8 @@ synonym: "SACMN" EXACT [] xref: CL:0000741 xref: TAO:0009311 is_a: ZFA:0009052 ! motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009312 @@ -38133,8 +38336,8 @@ synonym: "periarticular chondrocytes" EXACT PLURAL [] xref: CL:0000742 xref: TAO:0009312 is_a: ZFA:0009084 ! chondrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009313 @@ -38146,8 +38349,8 @@ synonym: "hypertrophic chondrocytes" EXACT PLURAL [] xref: CL:0000743 xref: TAO:0009313 is_a: ZFA:0009084 ! chondrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009314 @@ -38159,8 +38362,8 @@ synonym: "columnar chondrocytes" EXACT PLURAL [] xref: CL:0000744 xref: TAO:0009314 is_a: ZFA:0009084 ! chondrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009315 @@ -38172,9 +38375,9 @@ synonym: "horizontal cells" EXACT PLURAL [] xref: CL:0000745 xref: TAO:0009315 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009316 @@ -38188,10 +38391,10 @@ xref: CL:0000746 xref: TAO:0009316 is_a: ZFA:0005784 ! striated muscle cell is_a: ZFA:0009114 ! muscle cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001319 ! myocardium relationship: part_of ZFA:0005280 ! cardiac muscle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009317 @@ -38204,9 +38407,9 @@ xref: CL:0000747 xref: TAO:0009317 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005332 ! cyanoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009318 @@ -38217,8 +38420,8 @@ subset: cell_slim xref: CL:0000748 xref: TAO:0009318 is_a: ZFA:0009055 ! bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009319 @@ -38230,8 +38433,8 @@ synonym: "ON-bipolar cells" EXACT PLURAL [] xref: CL:0000749 xref: TAO:0009319 is_a: ZFA:0009318 ! retinal bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009320 @@ -38243,8 +38446,8 @@ synonym: "OFF-bipolar cells" EXACT PLURAL [] xref: CL:0000750 xref: TAO:0009320 is_a: ZFA:0009318 ! retinal bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009321 @@ -38257,8 +38460,8 @@ xref: CL:0000751 xref: TAO:0009321 is_a: ZFA:0009318 ! retinal bipolar neuron is_a: ZFA:0009319 ! ON-bipolar cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009322 @@ -38270,8 +38473,8 @@ synonym: "cone retinal bipolar cells" EXACT PLURAL [] xref: CL:0000752 xref: TAO:0009322 is_a: ZFA:0009318 ! retinal bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009323 @@ -38286,8 +38489,8 @@ xref: TAO:0009323 is_a: ZFA:0009044 ! blood cell is_a: ZFA:0009324 ! myeloid cell relationship: develops_from ZFA:0009351 ! thromboblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009324 @@ -38300,8 +38503,8 @@ xref: CL:0000763 xref: TAO:0009324 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009325 @@ -38313,8 +38516,8 @@ synonym: "erythroid lineage cells" EXACT PLURAL [] xref: CL:0000764 xref: TAO:0009325 is_a: ZFA:0009324 ! myeloid cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009326 @@ -38328,8 +38531,8 @@ xref: TAO:0009326 is_a: ZFA:0009309 ! leukocyte is_a: ZFA:0009324 ! myeloid cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009327 @@ -38351,8 +38554,8 @@ synonym: "polynuclear neutrophilic leukocyte" RELATED [] xref: CL:0000775 xref: TAO:0009327 is_a: ZFA:0009048 ! granulocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009328 @@ -38368,8 +38571,8 @@ xref: CL:0000776 xref: TAO:0009328 is_a: ZFA:0009327 ! neutrophil relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009329 @@ -38382,8 +38585,8 @@ xref: CL:0000778 xref: TAO:0009329 is_a: ZFA:0009047 ! osteoclast is_a: ZFA:0009064 ! mononuclear phagocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009330 @@ -38396,8 +38599,8 @@ xref: CL:0000781 xref: TAO:0009330 is_a: ZFA:0009270 ! odontoclast is_a: ZFA:0009329 ! mononuclear osteoclast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009331 @@ -38414,8 +38617,8 @@ is_a: ZFA:0009088 ! professional antigen presenting cell is_a: ZFA:0009142 ! B cell relationship: develops_from ZFA:0009343 ! immature B cell relationship: develops_from ZFA:0009345 ! transitional stage B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009332 @@ -38428,8 +38631,8 @@ xref: CL:0000786 xref: TAO:0009332 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009331 ! mature B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009333 @@ -38443,8 +38646,8 @@ synonym: "memory B-lymphocyte" EXACT [] xref: CL:0000787 xref: TAO:0009333 is_a: ZFA:0009331 ! mature B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009334 @@ -38458,8 +38661,8 @@ synonym: "naive B-lymphocyte" EXACT [] xref: CL:0000788 xref: TAO:0009334 is_a: ZFA:0009331 ! mature B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009335 @@ -38473,8 +38676,8 @@ synonym: "alpha-beta T-lymphocyte" EXACT [] xref: CL:0000789 xref: TAO:0009335 is_a: ZFA:0009046 ! T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009336 @@ -38490,8 +38693,8 @@ xref: CL:0000798 xref: TAO:0009336 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009350 ! pro-T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009337 @@ -38507,8 +38710,8 @@ xref: CL:0000799 xref: TAO:0009337 is_a: ZFA:0009046 ! T cell is_a: ZFA:0009336 ! gamma-delta T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009338 @@ -38524,8 +38727,8 @@ xref: TAO:0009338 is_a: ZFA:0009046 ! T cell is_a: ZFA:0009336 ! gamma-delta T cell relationship: develops_from ZFA:0009337 ! immature gamma-delta T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009339 @@ -38541,8 +38744,8 @@ synonym: "intraepithelial lymphocyte" RELATED [] xref: CL:0000801 xref: TAO:0009339 is_a: ZFA:0009338 ! mature gamma-delta T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009342 @@ -38557,8 +38760,8 @@ xref: CL:0000813 xref: TAO:0009342 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009046 ! T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009343 @@ -38574,8 +38777,8 @@ xref: CL:0000816 xref: TAO:0009343 is_a: ZFA:0009344 ! precursor B cell relationship: develops_from ZFA:0009349 ! pro-B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009344 @@ -38588,8 +38791,8 @@ xref: CL:0000817 xref: TAO:0009344 is_a: ZFA:0009142 ! B cell relationship: develops_from ZFA:0009349 ! pro-B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009345 @@ -38606,8 +38809,8 @@ synonym: "transitional stage B-lymphocyte" EXACT [] xref: CL:0000818 xref: TAO:0009345 is_a: ZFA:0009142 ! B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009346 @@ -38621,8 +38824,8 @@ xref: CL:0000823 xref: TAO:0009346 is_a: ZFA:0009278 ! natural killer cell relationship: develops_from ZFA:0009348 ! pro-NK cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009347 @@ -38637,8 +38840,8 @@ xref: CL:0000824 xref: TAO:0009347 is_a: ZFA:0009278 ! natural killer cell relationship: develops_from ZFA:0009346 ! immature natural killer cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009348 @@ -38655,8 +38858,8 @@ xref: CL:0000825 xref: TAO:0009348 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009349 @@ -38672,8 +38875,8 @@ xref: CL:0000826 xref: TAO:0009349 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009350 @@ -38689,9 +38892,9 @@ xref: CL:0000827 xref: TAO:0009350 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001078 ! thymus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009351 @@ -38705,8 +38908,8 @@ xref: CL:0000828 xref: TAO:0009351 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009352 @@ -38718,8 +38921,8 @@ synonym: "neutrophil stem cell" RELATED [] xref: CL:0000834 xref: TAO:0009352 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009353 @@ -38732,8 +38935,8 @@ xref: CL:0000835 xref: TAO:0009353 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009354 @@ -38748,8 +38951,8 @@ xref: CL:0000837 xref: TAO:0009354 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009355 @@ -38762,8 +38965,8 @@ synonym: "lymphoid progenitor cells" EXACT PLURAL [] xref: CL:0000838 xref: TAO:0009355 is_a: ZFA:0005830 ! hematopoietic cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009356 @@ -38777,8 +38980,8 @@ synonym: "myeloid progenitor cells" EXACT PLURAL [] xref: CL:0000839 xref: TAO:0009356 is_a: ZFA:0005830 ! hematopoietic cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009357 @@ -38790,8 +38993,8 @@ synonym: "mononuclear cells" EXACT PLURAL [] xref: CL:0000842 xref: TAO:0009357 is_a: ZFA:0009309 ! leukocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009358 @@ -38804,8 +39007,8 @@ synonym: "ciliated sensory neuron" EXACT [] xref: CL:0000847 xref: TAO:0009358 is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009359 @@ -38818,8 +39021,8 @@ synonym: "microvillous sensory neuron" RELATED [] xref: CL:0000848 xref: TAO:0009359 is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009360 @@ -38833,8 +39036,8 @@ synonym: "crypt sensory neuron" EXACT [] xref: CL:0000849 xref: TAO:0009360 is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009361 @@ -38852,8 +39055,8 @@ xref: CL:0000850 xref: TAO:0009192 xref: TAO:0009361 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009362 @@ -38865,9 +39068,9 @@ synonym: "neuromast mantle cells" EXACT PLURAL [] xref: CL:0000851 xref: TAO:0009362 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009363 @@ -38879,9 +39082,9 @@ synonym: "neuromast support cells" EXACT PLURAL [] xref: CL:0000852 xref: TAO:0009363 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009364 @@ -38893,8 +39096,8 @@ synonym: "olfactory sustentacular cell" EXACT [] xref: CL:0000853 xref: TAO:0009364 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009365 @@ -38907,9 +39110,9 @@ xref: CL:0000854 xref: TAO:0009365 is_a: ZFA:0009080 ! neurectodermal cell relationship: develops_from ZFA:0009012 ! neuroplacodal cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009366 @@ -38921,8 +39124,8 @@ synonym: "hair cells" EXACT PLURAL [] xref: CL:0000855 xref: TAO:0009366 is_a: ZFA:0009120 ! mechanoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009367 @@ -38934,9 +39137,9 @@ synonym: "neuromast hair cells" EXACT PLURAL [] xref: CL:0000856 xref: TAO:0009367 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009368 @@ -38948,8 +39151,8 @@ synonym: "slow muscle myoblasts" EXACT PLURAL [] xref: CL:0000857 xref: TAO:0009368 is_a: ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009369 @@ -38961,8 +39164,8 @@ synonym: "fast muscle myoblasts" EXACT PLURAL [] xref: CL:0000858 xref: TAO:0009369 is_a: ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009370 @@ -38973,8 +39176,8 @@ synonym: "stretch receptor cells" EXACT PLURAL [] xref: CL:1000082 xref: TAO:0009370 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009371 @@ -38985,8 +39188,8 @@ synonym: "stratified keratinized epithelial stem cells" EXACT PLURAL [] xref: CL:1000083 xref: TAO:0009371 is_a: ZFA:0009180 ! stratified epithelial stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009372 @@ -38997,9 +39200,9 @@ comment: Definition not present in CL. subset: cell_slim xref: CL:0000068 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005171 ! duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-29T05:17:20Z @@ -39012,8 +39215,8 @@ subset: cell_slim xref: CL:0002518 is_a: ZFA:0009034 ! epithelial cell is_a: ZFA:0009389 ! kidney cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009375 @@ -39026,8 +39229,8 @@ xref: CL:0005010 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009374 ! kidney epithelial cell is_a: ZFA:0009388 ! meso-epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-06T01:42:07Z @@ -39039,8 +39242,8 @@ def: "A cuboidal epithelial cell of the kidney which secretes acid and reabsorbs subset: cell_slim xref: CL:0005011 is_a: ZFA:0009375 ! renal intercalated cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-06T01:42:03Z @@ -39052,9 +39255,9 @@ def: "An epithelial cell of the intrahepatic portion of the bile duct." [GOC:tfm subset: cell_slim xref: CL:0002538 is_a: ZFA:0009372 ! duct epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005169 ! intrahepatic bile duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-07-29T05:21:19Z @@ -39066,9 +39269,9 @@ def: "Epithelial cell found in the ducts of the pancreas." [GOC:tfm] subset: cell_slim xref: CL:0002079 is_a: ZFA:0009372 ! duct epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2013-07-29T05:23:07Z @@ -39081,8 +39284,8 @@ subset: cell_slim xref: CL:0002076 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-02T04:25:16Z @@ -39098,8 +39301,8 @@ xref: CL:0000710 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009385 ! ecto-epithelial cell relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009385 @@ -39111,8 +39314,8 @@ xref: CL:0002077 is_a: ZFA:0009034 ! epithelial cell is_a: ZFA:0009386 ! somatic cell relationship: develops_from ZFA:0009137 ! ectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009386 @@ -39122,8 +39325,8 @@ def: "A cell of an organism that does not pass on its genetic material to the or subset: cell_slim xref: CL:0002371 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009387 @@ -39133,8 +39336,8 @@ def: "A cell whose primary function is to support other cell types." [FB:ma, GOC subset: cell_slim xref: CL:0000630 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009388 @@ -39147,8 +39350,8 @@ xref: CL:0002078 is_a: ZFA:0009034 ! epithelial cell is_a: ZFA:0009386 ! somatic cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009389 @@ -39158,9 +39361,9 @@ def: "Cell that is part of the kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917] subset: cell_slim xref: CL:1000497 is_a: ZFA:0009386 ! somatic cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0009390 @@ -39170,8 +39373,8 @@ subset: cell_slim xref: CL:1000500 is_a: ZFA:0009389 ! kidney cell is_a: ZFA:0009392 ! connective tissue cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009391 @@ -39180,8 +39383,8 @@ namespace: zebrafish_anatomy subset: cell_slim xref: CL:1000504 is_a: ZFA:0009389 ! kidney cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009392 @@ -39191,8 +39394,8 @@ def: "A cell of the supporting or framework tissue of the body, arising chiefly subset: cell_slim xref: CL:0002320 is_a: ZFA:0009386 ! somatic cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009393 @@ -39203,8 +39406,8 @@ comment: Usually express Prox1, or prox1b. subset: cell_slim xref: CL:0005020 is_a: ZFA:0009020 ! multi fate stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-12T04:44:34Z @@ -39217,8 +39420,8 @@ subset: cell_slim xref: CL:0005021 is_a: ZFA:0009081 ! mesenchymal cell is_a: ZFA:0009393 ! lymphangioblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-12T05:01:22Z @@ -39231,8 +39434,8 @@ subset: cell_slim synonym: "parachordal lymphangioblast" NARROW [] xref: CL:0005022 is_a: ZFA:0009393 ! lymphangioblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-12T05:21:09Z @@ -39244,8 +39447,8 @@ def: "The neurons that utilize glycine as a neurotransmitter." [MP:0010385] subset: cell_slim xref: CL:1001509 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009397 @@ -39258,8 +39461,8 @@ synonym: "epithelial cell of bile duct" EXACT [] xref: CL:1000488 is_a: ZFA:0009372 ! duct epithelial cell relationship: develops_from ZFA:0009398 ! hepatoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-02T12:08:01Z @@ -39271,8 +39474,8 @@ def: "Multi fate stem cell that gives rise to both hepatocytes and cholangiocyte subset: cell_slim is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0000124 ! liver primordium -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-08-02T12:13:12Z @@ -39284,9 +39487,9 @@ def: "An epithelial cell of the intestine." [GOC:tfm] subset: cell_slim xref: CL:0002563 is_a: ZFA:0009383 ! endo-epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2013-08-02T04:26:27Z @@ -39298,9 +39501,9 @@ def: "An epithelial cell of the esophagus." [GOC:tfm] subset: cell_slim xref: CL:0002252 is_a: ZFA:0009383 ! endo-epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000204 ! esophagus -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2013-08-02T04:32:14Z @@ -39309,11 +39512,12 @@ id: ZFA:0009401 name: lens fiber cell namespace: zebrafish_anatomy def: "A vertebrate lens cell that is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye." [GOC:nv] +subset: cell_slim xref: CL:0011004 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-09-01T15:46:37Z @@ -39325,9 +39529,9 @@ def: "Cell that is part of the heart valve." [CL:editor] subset: cell_slim xref: CL:1000147 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005065 ! heart valve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-08T09:32:56Z @@ -39339,21 +39543,22 @@ def: "Cells that secrete the extracellular matrix of the heart valve." [GOC:cvs, subset: cell_slim synonym: "VIC" RELATED [ZFIN:ZDB-PUB-191202-2] is_a: ZFA:0009402 ! heart valve cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-08T09:43:48Z [Term] id: ZFA:0009404 -name: heart valve endothelial cells +name: heart valve endothelial cell namespace: zebrafish_anatomy def: "Endothelial cells that surround the heart valve extracellular matrix." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191202-2] subset: cell_slim +synonym: "heart valve endocardial cell" EXACT [ZFIN:ZDB-PUB-200221-32] synonym: "VEC" RELATED [ZFIN:ZDB-PUB-191202-2] is_a: ZFA:0009402 ! heart valve cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-08T09:48:24Z @@ -39364,367 +39569,466 @@ namespace: zebrafish_anatomy [Term] id: ZFS:0000000 -name: Unknown +name: unknown namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-050211-1 xref: ZFIN:ZDB-TERM-100331-2430 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage [Term] id: ZFS:0000001 -name: Zygote:1-cell +name: zygote:1-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-4 xref: ZFIN:ZDB-TERM-100331-2431 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage [Term] id: ZFS:0000002 -name: Cleavage:2-cell +name: cleavage:2-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-15 xref: ZFIN:ZDB-TERM-100331-2432 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000003 -name: Cleavage:4-cell +name: cleavage:4-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-11 xref: ZFIN:ZDB-TERM-100331-2433 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000004 -name: Cleavage:8-cell +name: cleavage:8-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-33 xref: ZFIN:ZDB-TERM-100331-2434 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000005 -name: Cleavage:16-cell +name: cleavage:16-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-20 xref: ZFIN:ZDB-TERM-100331-2435 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000006 -name: Cleavage:32-cell +name: cleavage:32-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-25 xref: ZFIN:ZDB-TERM-100331-2436 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000007 -name: Cleavage:64-cell +name: cleavage:64-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-28 xref: ZFIN:ZDB-TERM-100331-2437 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000008 -name: Blastula:128-cell +name: blastula:128-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-7 xref: ZFIN:ZDB-TERM-100331-2438 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000009 -name: Blastula:256-cell +name: blastula:256-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-1 xref: ZFIN:ZDB-TERM-100331-2439 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000010 -name: Blastula:512-cell +name: blastula:512-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-14 xref: ZFIN:ZDB-TERM-100331-2440 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000011 -name: Blastula:1k-cell +name: blastula:1k-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-22 xref: ZFIN:ZDB-TERM-100331-2441 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000012 -name: Blastula:High +name: blastula:high namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-27 xref: ZFIN:ZDB-TERM-100331-2442 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000013 -name: Blastula:Oblong +name: blastula:oblong namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-24 xref: ZFIN:ZDB-TERM-100331-2443 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000014 -name: Blastula:Sphere +name: blastula:sphere namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-21 xref: ZFIN:ZDB-TERM-100331-2444 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000015 -name: Blastula:Dome +name: blastula:dome namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-19 xref: ZFIN:ZDB-TERM-100331-2445 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000016 -name: Blastula:30%-epiboly +name: blastula:30%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-17 xref: ZFIN:ZDB-TERM-100331-2446 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000017 -name: Gastrula:50%-epiboly +name: gastrula:50%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-6 xref: ZFIN:ZDB-TERM-100331-2447 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000018 -name: Gastrula:Germ-ring +name: gastrula:germ-ring namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-3 xref: ZFIN:ZDB-TERM-100331-2448 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000019 -name: Gastrula:Shield +name: gastrula:shield namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-2 xref: ZFIN:ZDB-TERM-100331-2449 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000020 -name: Gastrula:75%-epiboly +name: gastrula:75%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-18 xref: ZFIN:ZDB-TERM-100331-2450 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000021 -name: Gastrula:90%-epiboly +name: gastrula:90%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-29 xref: ZFIN:ZDB-TERM-100331-2451 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000022 -name: Gastrula:Bud +name: gastrula:bud namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-12 xref: ZFIN:ZDB-TERM-100331-2452 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000023 -name: Segmentation:1-4 somites +name: segmentation:1-4 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-23 xref: ZFIN:ZDB-TERM-100331-2453 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000024 -name: Segmentation:5-9 somites +name: segmentation:5-9 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-5 xref: ZFIN:ZDB-TERM-100331-2454 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000025 -name: Segmentation:10-13 somites +name: segmentation:10-13 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-020626-1 xref: ZFIN:ZDB-TERM-100331-2455 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000026 -name: Segmentation:14-19 somites +name: segmentation:14-19 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-30 xref: ZFIN:ZDB-TERM-100331-2456 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000027 -name: Segmentation:20-25 somites +name: segmentation:20-25 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-16 xref: ZFIN:ZDB-TERM-100331-2457 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000028 -name: Segmentation:26+ somites +name: segmentation:26+ somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-34 xref: ZFIN:ZDB-TERM-100331-2458 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000029 -name: Pharyngula:Prim-5 +name: pharyngula:prim-5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-10 xref: ZFIN:ZDB-TERM-100331-2439 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000030 -name: Pharyngula:Prim-15 +name: pharyngula:prim-15 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-32 xref: ZFIN:ZDB-TERM-100331-2460 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000031 -name: Pharyngula:Prim-25 +name: pharyngula:prim-25 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-13 xref: ZFIN:ZDB-TERM-100331-2461 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000032 -name: Pharyngula:High-pec +name: pharyngula:high-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-31 xref: ZFIN:ZDB-TERM-100331-2462 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000033 -name: Hatching:Long-pec +name: hatching:long-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-9 xref: ZFIN:ZDB-TERM-100331-2463 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0007000 ! hatching [Term] id: ZFS:0000034 -name: Hatching:Pec-fin +name: hatching:pec-fin namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-26 xref: ZFIN:ZDB-TERM-100331-2464 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0007000 ! hatching [Term] id: ZFS:0000035 -name: Larval:Protruding-mouth +name: larval:protruding-mouth namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-8 xref: ZFIN:ZDB-TERM-100331-2465 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000036 -name: Larval:Day 4 +name: larval:day 4 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-35 xref: ZFIN:ZDB-TERM-100331-2466 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000037 -name: Larval:Day 5 +name: larval:day 5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-36 xref: ZFIN:ZDB-TERM-100331-2467 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000038 -name: Larval:Day 6 +name: larval:day 6 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-37 xref: ZFIN:ZDB-TERM-100331-2468 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000039 -name: Larval:Days 7-13 +name: larval:days 7-13 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-47 xref: ZFIN:ZDB-TERM-100331-2469 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000040 -name: Larval:Days 14-20 +name: larval:days 14-20 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-48 xref: ZFIN:ZDB-TERM-100331-2470 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000041 -name: Larval:Days 21-29 +name: larval:days 21-29 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-49 xref: ZFIN:ZDB-TERM-100331-2471 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000042 -name: Juvenile:Days 30-44 +name: juvenile:days 30-44 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-51 xref: ZFIN:ZDB-TERM-100331-2472 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000051 ! juvenile [Term] id: ZFS:0000043 -name: Juvenile:Days 45-89 +name: juvenile:days 45-89 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-52 xref: ZFIN:ZDB-TERM-100331-2473 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000051 ! juvenile [Term] id: ZFS:0000044 -name: Adult +name: adult namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-39 xref: ZFIN:ZDB-TERM-100331-2474 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage + +[Term] +id: ZFS:0000045 +name: blastula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000046 ! cleavage + +[Term] +id: ZFS:0000046 +name: cleavage +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage + +[Term] +id: ZFS:0000047 +name: gastrula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000045 ! blastula + +[Term] +id: ZFS:0000048 +name: larva +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0007000 ! hatching + +[Term] +id: ZFS:0000049 +name: segmentation +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000047 ! gastrula + +[Term] +id: ZFS:0000050 +name: pharyngula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000049 ! segmentation + +[Term] +id: ZFS:0000051 +name: juvenile +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000048 ! larva + +[Term] +id: ZFS:0007000 +name: hatching +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000050 ! pharyngula +created_by: yvonne +creation_date: 2014-11-05T08:33:09Z [Term] id: ZFS:0100000 -name: Stages +name: zebrafish stage namespace: zebrafish_stages [Typedef] @@ -39766,6 +40070,13 @@ xref: BFO:0000051 is_transitive: true is_a: overlaps ! overlaps +[Typedef] +id: immediately_preceded_by +name: immediately_preceded_by +def: "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y)." [goc:cjm] +xref: RO:0002087 +is_a: preceded_by ! preceded_by + [Typedef] id: overlaps name: overlaps @@ -39779,6 +40090,13 @@ is_transitive: true is_a: overlaps ! overlaps inverse_of: has_part ! has_part +[Typedef] +id: preceded_by +name: preceded_by +def: "X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X)." [goc:cjm] +xref: BFO:0000062 +is_transitive: true + [Typedef] id: start name: start stage diff --git a/zfa-base.owl b/zfa-base.owl index 46695de..c8d97bc 100644 --- a/zfa-base.owl +++ b/zfa-base.owl @@ -12,22 +12,23 @@ xmlns:terms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + + + ZFA description. Zebrafish Anatomy Ontology (ZFA) - OBO-Edit 2.3.1 - 08:03:2021 11:16 + OBO-Edit 2.3-beta5 + 29:11:2022 16:29 zebrafish_anatomical_ontology 1.2 - ceriv + zfinf CARO part_of NCBITaxon:7955 CL part_of NCBITaxon:7955 TAO part_of NCBITaxon:7955 VSAO part_of NCBITaxon:7955 - SVN version: $Revision: 1.100$ - 2022-03-15 + 2022-12-09 @@ -303,6 +304,46 @@ + + + + + X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X). + BFO:0000062 + zebrafish_anatomical_ontology + preceded_by + preceded_by + preceded_by + + + + + X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X). + goc:cjm + + + + + + + + + X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y). + RO:0002087 + zebrafish_anatomical_ontology + immediately_preceded_by + immediately_preceded_by + immediately_preceded_by + + + + + X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y). + goc:cjm + + + + @@ -7903,7 +7944,7 @@ Brain structure which is one of three parts of the cerebellum and is the entry point for a posterior cerebellar tract that carries cerebellar afferents from many brain stem nuclei. From Neuroanatomy of the Zebrafish Brain. TAO:0000188 cerebellar corpus - corpus cerebelli granular layer + corpus cerebelli granular layer corpus cerebellum zebrafish_anatomy ZFA:0000188 @@ -7920,7 +7961,7 @@ - corpus cerebelli granular layer + corpus cerebelli granular layer ZFIN:ZDB-PUB-961014-1280 @@ -10017,18 +10058,18 @@ ZFA:0000239 mesocoracoid bone - - - - Endochondral bone that articulates laterally with the medial surface of the cleithrum and ventro-medially with the scapula and coracoid. Mesocoracoid bone is a small, arch-like bone that develops from the mesocoracoid cartilage. Mesocoracoid bone is paired. - TAO:WD - mesocoracoid bones + + + + Endochondral bone that articulates laterally with the medial surface of the cleithrum and ventro-medially with the scapula and coracoid. Mesocoracoid bone is a small, arch-like bone that develops from the mesocoracoid cartilage. Mesocoracoid bone is paired. + TAO:WD + @@ -10874,7 +10915,7 @@ One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -11991,7 +12032,7 @@ Paired, deep caudal fin muscles that originate from the 30th vertebra and extend toward the dorsal base of the caudal fin where they insert broadly on fin rays. TAO:0000287 - flexor caudalis dorsalis superioris + flexor caudalis dorsalis superioris superior dorsal flexor zebrafish_anatomy CDS @@ -14261,7 +14302,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -16348,7 +16389,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -17366,7 +17407,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -18110,7 +18151,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:JCN 421-:189-198 + ZFIN:ZDB-PUB-000523-3 @@ -18438,7 +18479,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Portion of tissue, located on the upper jaw that defines the caudal extent of the labial cavity. The oral valves control the flow of water into the mouth during routine respiration. TAO:0000451 maxillary valve - upper semilunar valve + upper semilunar valve zebrafish_anatomy breathing valve buccal valve @@ -18455,7 +18496,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. - upper semilunar valve + upper semilunar valve ZFIN:ZDB-PUB-060921-12 @@ -18967,7 +19008,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -20383,7 +20424,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Mandibular muscle that inserts along the dorsolateral faces of the opercles. Responsible for opercular abduction. TAO:0000498 - dilatator opercula + dilatator opercula zebrafish_anatomy dilator opercula dilators operculi @@ -20941,7 +20982,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. LVII lobus facialis zebrafish_anatomy - tuberculum impar of Herrick + tuberculum impar of Herrick ZFA:0000512 facial lobe @@ -21474,7 +21515,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -22477,7 +22518,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000549 postemporal zebrafish_anatomy - post-temporal + post-temporal ZFA:0000549 posttemporal @@ -24218,7 +24259,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000588 auditory ganglion gVIII - octaval ganglion + octaval ganglion sag statoacoustic ganglia zebrafish_anatomy @@ -24684,7 +24725,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Multi-tissue structure that is part of the midbrain and develops from the alar plate. The torus semicircularis is located dorsal to the lateral tegmentum where it extends into the medial tectal ventricle and receives ascending sensory octavolateralis input. TAO:0000599 - semicircular torus + semicircular torus zebrafish_anatomy ZFA:0000599 torus semicircularis @@ -25037,7 +25078,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000608 transverse ventralis - transversus ventralis + transversus ventralis zebrafish_anatomy ZFA:0000608 ventral transverse @@ -33326,7 +33367,7 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - Portion of somite 16 that gives rise to body wall muscle masses. + Portion of somite 26 that gives rise to body wall muscle masses. TAO:0000807 zebrafish_anatomy ZFA:0000807 @@ -33336,7 +33377,7 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - Portion of somite 16 that gives rise to body wall muscle masses. + Portion of somite 26 that gives rise to body wall muscle masses. GOC:ymb ORCiD:0000-0002-9900-7880 ZFIN:ZDB-PUB-961014-576 @@ -38969,19 +39010,22 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) TAO:0000944 pll zebrafish_anatomy + midbody lateral line + midtrunk line ZFA:0000944 posterior lateral line - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 + ZFIN:ZDB-PUB-110811-14 @@ -53869,7 +53913,7 @@ The ciliary "body" does not contain processes or a cumferential band o tunica muscularis - http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html + http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html @@ -74290,7 +74334,7 @@ The epithelium exists before becoming folded into the rosette. - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) TAO:0005112 dorsal lateral lines zebrafish_anatomy @@ -74300,9 +74344,10 @@ The epithelium exists before becoming folded into the rosette. - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 + ZFIN:ZDB-PUB-070907-34 @@ -75131,7 +75176,7 @@ The epithelium exists before becoming folded into the rosette. tunica serosa - http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html + http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html @@ -99473,6 +99518,7 @@ This may be the same as CoBL. 2013-09-30T03:31:51Z zebrafish_anatomy ZFA:0005768 + trigeminal sensory neuron @@ -99551,6 +99597,7 @@ This may be the same as CoBL. 2013-11-05T11:05:25Z zebrafish_anatomy ZFA:0005770 + crypt neuron olfactory support cell @@ -99659,6 +99706,7 @@ This may be the same as CoBL. CL:0002546 zebrafish_anatomy ZFA:0005773 + embryonic blood vessel endothelial progenitor cell @@ -99738,6 +99786,7 @@ This may be the same as CoBL. CL:0007011 zebrafish_anatomy ZFA:0005775 + enteric neuron @@ -99777,6 +99826,7 @@ This may be the same as CoBL. CL:0011102 zebrafish_anatomy ZFA:0005776 + parasympathetic neuron @@ -99816,6 +99866,7 @@ This may be the same as CoBL. CL:0011103 zebrafish_anatomy ZFA:0005777 + sympathetic neuron @@ -99850,6 +99901,7 @@ This may be the same as CoBL. zebrafish_anatomy orexin secreting neuron ZFA:0005778 + hypocretin-secreting neuron @@ -100081,6 +100133,7 @@ This may be the same as CoBL. CL:0000737 zebrafish_anatomy ZFA:0005784 + striated muscle cell @@ -100189,6 +100242,7 @@ This may be the same as CoBL. 2014-03-25T09:31:29Z zebrafish_anatomy ZFA:0005786 + cleft cell @@ -103489,6 +103543,7 @@ this previously described vessel is connected to, or derived from, the FL networ 2016-01-12T10:33:08Z zebrafish_anatomy ZFA:0005865 + reticulospinal neuron @@ -103524,6 +103579,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy V ZFA:0005866 + vestibulospinal neuron @@ -103845,6 +103901,7 @@ this previously described vessel is connected to, or derived from, the FL networ 2016-03-23T01:14:15Z zebrafish_anatomy ZFA:0005874 + spiral neuron @@ -104013,6 +104070,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0000024 zebrafish_anatomy ZFA:0005878 + oogonia @@ -106596,7 +106654,19 @@ this previously described vessel is connected to, or derived from, the FL networ - Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes . + + + + + + + + + + + + + Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes . ceriv 2021-01-27T10:44:40Z zebrafish_anatomy @@ -106607,7 +106677,7 @@ this previously described vessel is connected to, or derived from, the FL networ - Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes . + Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes . GOC:cvs ORCID:0000-0002-1009-339X ORCID:0000-0002-2244-7917 @@ -106616,6 +106686,38 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + + + + + + + + + + + + Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance. + ceriv + 2021-03-25T15:52:05Z + zebrafish_anatomy + ZFA:0005943 + perivitelline fluid + + + + + Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance. + ZFIN:ZDB-PUB-200910-2 + + + + @@ -106658,6 +106760,521 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + + + + + + + + + + + + Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus. + 2021-07-09T09:06:25Z + red-sensitive cone cell + zebrafish_anatomy + unequal double cone cell + ZFA:0005945 + + long double cone cell + + + + + Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + red-sensitive cone cell + ZFIN:ZDB-PUB-990520-1 + + + + + unequal double cone cell + ZFIN:ZDB-PUB-961014-677 + + + + + + + + + + + + + + + + + + + + + Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus. + ceriv + 2021-07-09T10:53:10Z + green-sensitive cone + zebrafish_anatomy + unequal double cone cell + ZFA:0005946 + + short double cone cell + + + + + Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + green-sensitive cone + ZFIN:ZDB-PUB-990520-1 + + + + + unequal double cone cell + ZFIN:ZDB-PUB-961014-677 + + + + + + + + + + + + + + + + + + + + + Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells. + ceriv + 2021-07-09T11:01:04Z + blue-sensitive cone cell + zebrafish_anatomy + ZFA:0005947 + + long single cone cell + + + + + Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + blue-sensitive cone cell + ZFIN:ZDB-PUB-990520-1 + + + + + + + + + + + + + + + + + + + + + Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs. + ceriv + 2021-07-09T11:10:25Z + UV-sensitive cone + ultraviolet-sensitive cone + zebrafish_anatomy + ZFA:0005948 + + short single cone cell + + + + + Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + UV-sensitive cone + ZFIN:ZDB-PUB-990520-1 + + + + + + + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the heart. + 2021-08-13T11:47:35Z + zebrafish_anatomy + ZFA:0005949 + heart lymph vessel + + + + + Lymph vessel located in the heart. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition. + ceriv + 2021-08-13T11:53:55Z + outflow tract lymph vessel + zebrafish_anatomy + ZFA:0005950 + bulbus arteriosus lymph vessel + + + + + Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels. + ceriv + 2021-08-13T11:58:24Z + zebrafish_anatomy + ZFA:0005951 + cardiac ventricle lymph vessel + + + + + Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + Lymphatic system of the heart. + ceriv + 2021-08-13T12:23:44Z + zebrafish_anatomy + ZFA:0005952 + heart lymphatic system + + + + + Lymphatic system of the heart. + GOC:CVS + ORCID:0000-0002-2244-7917 + + + + + + + + + + + + + + + + + + + + + Capillary plexus that is located in the heart. + ceriv + 2021-08-13T12:26:17Z + zebrafish_anatomy + ZFA:0005953 + coronary capillary plexus + + + + + Capillary plexus that is located in the heart. + GOC:cvs + ORCID:0000-0002-2244-7917 + + + + + + + + + + + + + + + + + + + + + + + + + + + Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network. + ceriv + 2021-08-13T12:30:04Z + isolated lymph endothelial cells + zebrafish_anatomy + ZFA:0005954 + cardiac lymphatic endothelial cluster + + + + + Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage. + ceriv + 2021-08-13T12:53:02Z + zebrafish_anatomy + ZFA:0005955 + lymphatic endothelial cluster + + + + + Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + A stem cell that can give rise to cell types of the germ-line. + ceriv + 2021-08-13T13:44:39Z + CL:0000014 + zebrafish_anatomy + ZFA:0005956 + + germline stem cell + + + + + A stem cell that can give rise to cell types of the germ-line. + ORCID:0000-0002-4142-7153 + + + + + + + + + + + + + + + + + + + + + A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. + ceriv + 2021-08-13T13:47:16Z + CL:0000034 + zebrafish_anatomy + ZFA:0005957 + + stem cell + + + + + A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. + GOC:tfm + + + + @@ -110285,6 +110902,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory neural crest cells zebrafish_anatomy ZFA:0007084 + premigratory neural crest cell @@ -110377,6 +110995,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory neural crest cells zebrafish_anatomy ZFA:0007086 + migratory neural crest cell @@ -110491,6 +111110,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0002321 zebrafish_anatomy ZFA:0007089 + embryonic cell @@ -110531,6 +111151,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory cranial neural crest cells zebrafish_anatomy ZFA:0007090 + premigratory cranial neural crest cell @@ -110584,6 +111205,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory cranial neural crest cells zebrafish_anatomy ZFA:0007091 + migratory cranial neural crest cell @@ -110705,6 +111327,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory trunk neural crest cells zebrafish_anatomy ZFA:0007094 + premigratory trunk neural crest cell @@ -110758,6 +111381,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory trunk neural crest cells zebrafish_anatomy ZFA:0007095 + migratory trunk neural crest cell @@ -111611,6 +112235,7 @@ this previously described vessel is connected to, or derived from, the FL networ CSF-cNs zebrafish_anatomy ZFA:0007120 + cerebrospinal fluid contacting neuron @@ -111661,6 +112286,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy KA 2 ZFA:0007121 + ventral cerebrospinal fluid contacting neuron @@ -111710,6 +112336,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy <new synonym> ZFA:0007122 + epidermal stem cell @@ -111750,6 +112377,7 @@ this previously described vessel is connected to, or derived from, the FL networ ionocyte progenitor cells zebrafish_anatomy ZFA:0007123 + ionocyte progenitor cell @@ -111797,6 +112425,7 @@ this previously described vessel is connected to, or derived from, the FL networ keratinocyte progenitor cells zebrafish_anatomy ZFA:0007124 + keratinocyte progenitor cell @@ -123877,7 +124506,7 @@ this previously described vessel is connected to, or derived from, the FL networ - + @@ -123904,7 +124533,7 @@ this previously described vessel is connected to, or derived from, the FL networ A stem cell that can give rise to cell types of the body other than those of the germ-line. - GO:CJM + GO:cjm @@ -127472,6 +128101,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0011004 zebrafish_anatomy ZFA:0009401 + lens fiber cell @@ -127584,11 +128214,12 @@ this previously described vessel is connected to, or derived from, the FL networ Endothelial cells that surround the heart valve extracellular matrix. ceriv 2020-12-08T09:48:24Z + heart valve endocardial cell zebrafish_anatomy VEC ZFA:0009404 - heart valve endothelial cells + heart valve endothelial cell @@ -127598,6 +128229,12 @@ this previously described vessel is connected to, or derived from, the FL networ ORCID:0000-0002-2244-7917 ZFIN:ZDB-PUB-191202-2 + + + + heart valve endocardial cell + ZFIN:ZDB-PUB-200221-32 + @@ -127625,7 +128262,7 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2430 zebrafish_stages ZFS:0000000 - Unknown + unknown @@ -127638,7 +128275,7 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2431 zebrafish_stages ZFS:0000001 - Zygote:1-cell + zygote:1-cell @@ -127647,11 +128284,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-15 ZFIN:ZDB-TERM-100331-2432 zebrafish_stages ZFS:0000002 - Cleavage:2-cell + cleavage:2-cell @@ -127660,11 +128303,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-11 ZFIN:ZDB-TERM-100331-2433 zebrafish_stages ZFS:0000003 - Cleavage:4-cell + cleavage:4-cell @@ -127673,11 +128322,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-33 ZFIN:ZDB-TERM-100331-2434 zebrafish_stages ZFS:0000004 - Cleavage:8-cell + cleavage:8-cell @@ -127686,11 +128341,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-20 ZFIN:ZDB-TERM-100331-2435 zebrafish_stages ZFS:0000005 - Cleavage:16-cell + cleavage:16-cell @@ -127699,11 +128360,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-25 ZFIN:ZDB-TERM-100331-2436 zebrafish_stages ZFS:0000006 - Cleavage:32-cell + cleavage:32-cell @@ -127712,11 +128379,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-28 ZFIN:ZDB-TERM-100331-2437 zebrafish_stages ZFS:0000007 - Cleavage:64-cell + cleavage:64-cell @@ -127725,11 +128398,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-7 ZFIN:ZDB-TERM-100331-2438 zebrafish_stages ZFS:0000008 - Blastula:128-cell + blastula:128-cell @@ -127738,11 +128417,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-1 ZFIN:ZDB-TERM-100331-2439 zebrafish_stages ZFS:0000009 - Blastula:256-cell + blastula:256-cell @@ -127751,11 +128436,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-14 ZFIN:ZDB-TERM-100331-2440 zebrafish_stages ZFS:0000010 - Blastula:512-cell + blastula:512-cell @@ -127764,11 +128455,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-22 ZFIN:ZDB-TERM-100331-2441 zebrafish_stages ZFS:0000011 - Blastula:1k-cell + blastula:1k-cell @@ -127777,11 +128474,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-27 ZFIN:ZDB-TERM-100331-2442 zebrafish_stages ZFS:0000012 - Blastula:High + blastula:high @@ -127790,11 +128493,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-24 ZFIN:ZDB-TERM-100331-2443 zebrafish_stages ZFS:0000013 - Blastula:Oblong + blastula:oblong @@ -127803,11 +128512,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-21 ZFIN:ZDB-TERM-100331-2444 zebrafish_stages ZFS:0000014 - Blastula:Sphere + blastula:sphere @@ -127816,11 +128531,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-19 ZFIN:ZDB-TERM-100331-2445 zebrafish_stages ZFS:0000015 - Blastula:Dome + blastula:dome @@ -127829,11 +128550,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-17 ZFIN:ZDB-TERM-100331-2446 zebrafish_stages ZFS:0000016 - Blastula:30%-epiboly + blastula:30%-epiboly @@ -127842,11 +128569,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-6 ZFIN:ZDB-TERM-100331-2447 zebrafish_stages ZFS:0000017 - Gastrula:50%-epiboly + gastrula:50%-epiboly @@ -127855,11 +128588,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-3 ZFIN:ZDB-TERM-100331-2448 zebrafish_stages ZFS:0000018 - Gastrula:Germ-ring + gastrula:germ-ring @@ -127868,11 +128607,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-2 ZFIN:ZDB-TERM-100331-2449 zebrafish_stages ZFS:0000019 - Gastrula:Shield + gastrula:shield @@ -127881,11 +128626,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-18 ZFIN:ZDB-TERM-100331-2450 zebrafish_stages ZFS:0000020 - Gastrula:75%-epiboly + gastrula:75%-epiboly @@ -127894,11 +128645,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-29 ZFIN:ZDB-TERM-100331-2451 zebrafish_stages ZFS:0000021 - Gastrula:90%-epiboly + gastrula:90%-epiboly @@ -127907,11 +128664,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-12 ZFIN:ZDB-TERM-100331-2452 zebrafish_stages ZFS:0000022 - Gastrula:Bud + gastrula:bud @@ -127920,11 +128683,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-23 ZFIN:ZDB-TERM-100331-2453 zebrafish_stages ZFS:0000023 - Segmentation:1-4 somites + segmentation:1-4 somites @@ -127933,11 +128702,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-5 ZFIN:ZDB-TERM-100331-2454 zebrafish_stages ZFS:0000024 - Segmentation:5-9 somites + segmentation:5-9 somites @@ -127946,11 +128721,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-020626-1 ZFIN:ZDB-TERM-100331-2455 zebrafish_stages ZFS:0000025 - Segmentation:10-13 somites + segmentation:10-13 somites @@ -127959,11 +128740,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-30 ZFIN:ZDB-TERM-100331-2456 zebrafish_stages ZFS:0000026 - Segmentation:14-19 somites + segmentation:14-19 somites @@ -127972,11 +128759,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-16 ZFIN:ZDB-TERM-100331-2457 zebrafish_stages ZFS:0000027 - Segmentation:20-25 somites + segmentation:20-25 somites @@ -127985,11 +128778,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-34 ZFIN:ZDB-TERM-100331-2458 zebrafish_stages ZFS:0000028 - Segmentation:26+ somites + segmentation:26+ somites @@ -127998,11 +128797,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-10 ZFIN:ZDB-TERM-100331-2439 zebrafish_stages ZFS:0000029 - Pharyngula:Prim-5 + pharyngula:prim-5 @@ -128011,11 +128816,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-32 ZFIN:ZDB-TERM-100331-2460 zebrafish_stages ZFS:0000030 - Pharyngula:Prim-15 + pharyngula:prim-15 @@ -128024,11 +128835,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-13 ZFIN:ZDB-TERM-100331-2461 zebrafish_stages ZFS:0000031 - Pharyngula:Prim-25 + pharyngula:prim-25 @@ -128037,11 +128854,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-31 ZFIN:ZDB-TERM-100331-2462 zebrafish_stages ZFS:0000032 - Pharyngula:High-pec + pharyngula:high-pec @@ -128050,11 +128873,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-9 ZFIN:ZDB-TERM-100331-2463 zebrafish_stages ZFS:0000033 - Hatching:Long-pec + hatching:long-pec @@ -128063,11 +128892,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-26 ZFIN:ZDB-TERM-100331-2464 zebrafish_stages ZFS:0000034 - Hatching:Pec-fin + hatching:pec-fin @@ -128076,11 +128911,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-8 ZFIN:ZDB-TERM-100331-2465 zebrafish_stages ZFS:0000035 - Larval:Protruding-mouth + larval:protruding-mouth @@ -128089,11 +128930,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-35 ZFIN:ZDB-TERM-100331-2466 zebrafish_stages ZFS:0000036 - Larval:Day 4 + larval:day 4 @@ -128102,11 +128949,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-36 ZFIN:ZDB-TERM-100331-2467 zebrafish_stages ZFS:0000037 - Larval:Day 5 + larval:day 5 @@ -128115,11 +128968,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-37 ZFIN:ZDB-TERM-100331-2468 zebrafish_stages ZFS:0000038 - Larval:Day 6 + larval:day 6 @@ -128128,11 +128987,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-47 ZFIN:ZDB-TERM-100331-2469 zebrafish_stages ZFS:0000039 - Larval:Days 7-13 + larval:days 7-13 @@ -128141,11 +129006,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-48 ZFIN:ZDB-TERM-100331-2470 zebrafish_stages ZFS:0000040 - Larval:Days 14-20 + larval:days 14-20 @@ -128154,11 +129025,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-49 ZFIN:ZDB-TERM-100331-2471 zebrafish_stages ZFS:0000041 - Larval:Days 21-29 + larval:days 21-29 @@ -128167,11 +129044,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-51 ZFIN:ZDB-TERM-100331-2472 zebrafish_stages ZFS:0000042 - Juvenile:Days 30-44 + juvenile:days 30-44 @@ -128180,11 +129063,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-52 ZFIN:ZDB-TERM-100331-2473 zebrafish_stages ZFS:0000043 - Juvenile:Days 45-89 + juvenile:days 45-89 @@ -128197,7 +129086,139 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2474 zebrafish_stages ZFS:0000044 - Adult + adult + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000045 + blastula + + + + + + + + + zebrafish_stages + ZFS:0000046 + cleavage + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000047 + gastrula + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000048 + larva + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000049 + segmentation + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000050 + pharyngula + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000051 + juvenile + + + + + + + + + + + + + + + yvonne + 2014-11-05T08:33:09Z + zebrafish_stages + ZFS:0007000 + hatching @@ -128207,7 +129228,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_stages ZFS:0100000 - Stages + zebrafish stage diff --git a/zfa-full.json b/zfa-full.json index 69bb552..17e37f4 100644 --- a/zfa-full.json +++ b/zfa-full.json @@ -8,6 +8,11 @@ "pred": "inverseOf", "sub": "http://purl.obolibrary.org/obo/BFO_0000050" }, + { + "obj": "http://purl.obolibrary.org/obo/BFO_0000062", + "pred": "subPropertyOf", + "sub": "http://purl.obolibrary.org/obo/RO_0002087" + }, { "obj": "http://purl.obolibrary.org/obo/RO_0002131", "pred": "subPropertyOf", @@ -393,6 +398,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005075" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000009", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000010", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -623,6 +633,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0000329" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000020", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005943" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000022", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -3543,6 +3558,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005068" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000173", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000175", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -5153,6 +5173,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005658" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000385", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005955" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000386", "pred": "is_a", @@ -24223,6 +24248,16 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005814" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005811", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005952" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005811", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005953" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0005818", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -24553,6 +24588,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005862" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005844", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0005844", "pred": "is_a", @@ -25073,6 +25113,41 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0009181" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005949", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005949", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005952", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005952", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005955", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005957", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005956" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005957", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0006000", "pred": "http://purl.obolibrary.org/obo/RO_0002202", @@ -26048,6 +26123,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005944" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", "pred": "is_a", @@ -26383,11 +26463,6 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0009306" }, - { - "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", - "pred": "is_a", - "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" - }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", "pred": "is_a", @@ -28793,6 +28868,26 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005929" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005947" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005948" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009265", "pred": "http://purl.obolibrary.org/obo/RO_0002202", @@ -30038,6 +30133,11 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005930" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -30458,11 +30558,6 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0009306" }, - { - "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", - "pred": "http://purl.obolibrary.org/obo/RO_0002496", - "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" - }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -36658,6 +36753,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005926" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -39243,6 +39348,11 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005800" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -39498,6 +39608,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005769" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -39688,6 +39808,251 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0005594" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000008" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000009" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000010" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000011" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000012" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000013" + }, + { + "obj": 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+ { + "pred": "http://purl.obolibrary.org/obo/IAO_0000700", + "val": "http://purl.obolibrary.org/obo/ZFA_0100000" + }, + { + "pred": "http://purl.obolibrary.org/obo/IAO_0000700", + "val": "http://purl.obolibrary.org/obo/ZFS_0100000" + }, { "pred": "http://purl.org/dc/elements/1.1/description", "val": "ZFA description." @@ -39933,11 +40346,11 @@ }, { "pred": "http://www.geneontology.org/formats/oboInOwl#auto-generated-by", - "val": "OBO-Edit 2.3.1" + "val": "OBO-Edit 2.3-beta5" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#date", - "val": "08:03:2021 11:16" + "val": "29:11:2022 16:29" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#default-namespace", @@ -39949,7 +40362,7 @@ }, { "pred": "http://www.geneontology.org/formats/oboInOwl#saved-by", - "val": "ceriv" + "val": "zfinf" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-genus-differentia", @@ -39967,17 +40380,13 @@ "pred": 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before_or_simultaneous_with start(X).", + "xrefs": [ + "goc:cjm" + ] + }, + "xrefs": [ + { + "val": "BFO:0000062" + } + ] + }, + "type": "PROPERTY" + }, + { + "id": "http://purl.obolibrary.org/obo/RO_0002087", + "lbl": "immediately_preceded_by", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomical_ontology" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val": "immediately_preceded_by" + } + ], + "definition": { + "val": "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y).", + "xrefs": [ + "goc:cjm" + ] + }, + "xrefs": [ + { + "val": "RO:0002087" + } + ] + }, + "type": "PROPERTY" + }, { "id": "http://purl.obolibrary.org/obo/RO_0002131", "lbl": "overlaps", @@ -46095,7 +46560,7 @@ }, { "pred": "hasExactSynonym", - "val": "corpus cerebelli granular layer ", + "val": "corpus cerebelli granular layer", "xrefs": [ "ZFIN:ZDB-PUB-961014-1280" ] @@ -48432,7 +48897,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -49312,7 +49777,7 @@ "synonyms": [ { "pred": "hasExactSynonym", - "val": "flexor caudalis dorsalis superioris ", + "val": "flexor caudalis dorsalis superioris", "xrefs": [] }, { @@ -51190,7 +51655,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -52819,7 +53284,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -53579,7 +54044,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -54174,7 +54639,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:JCN 421-:189-198" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -54458,7 +54923,7 @@ }, { "pred": "hasExactSynonym", - "val": "upper semilunar valve ", + "val": "upper semilunar valve", "xrefs": [ "ZFIN:ZDB-PUB-060921-12" ] @@ -54888,7 +55353,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -55956,7 +56421,7 @@ }, { "pred": "hasExactSynonym", - "val": " dilatator opercula", + "val": "dilatator opercula", "xrefs": [] }, { @@ -56437,7 +56902,7 @@ }, { "pred": "hasRelatedSynonym", - "val": "tuberculum impar of Herrick ", + "val": "tuberculum impar of Herrick", "xrefs": [] } ], @@ -56822,7 +57287,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -57657,7 +58122,7 @@ }, { "pred": "hasRelatedSynonym", - "val": "post-temporal ", + "val": "post-temporal", "xrefs": [] } ], @@ -58930,7 +59395,7 @@ }, { "pred": "hasExactSynonym", - "val": "octaval ganglion ", + "val": "octaval ganglion", "xrefs": [] }, { @@ -59251,7 +59716,7 @@ "synonyms": [ { "pred": "hasExactSynonym", - "val": "semicircular torus ", + "val": "semicircular torus", "xrefs": [] } ], @@ -59538,7 +60003,7 @@ }, { "pred": "hasExactSynonym", - "val": "transversus ventralis ", + "val": "transversus ventralis", "xrefs": [] } ], @@ -65864,7 +66329,7 @@ } ], "definition": { - "val": "Portion of somite 16 that gives rise to body wall muscle masses.", + "val": "Portion of somite 26 that gives rise to body wall muscle masses.", "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", @@ -70134,10 +70599,11 @@ } ], "definition": { - "val": "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", + "val": "One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", "xrefs": [ "GOC:ymb", - "ORCiD:0000-0002-9900-7880" + "ORCiD:0000-0002-9900-7880", + "ZFIN:ZDB-PUB-110811-14" ] }, "synonyms": [ @@ -70145,6 +70611,16 @@ "pred": "hasExactSynonym", "val": "pll", "xrefs": [] + }, + { + "pred": "hasRelatedSynonym", + "val": "midbody lateral line", + "xrefs": [] + }, + { + "pred": "hasRelatedSynonym", + "val": "midtrunk line", + "xrefs": [] } ], "xrefs": [ @@ -81428,7 +81904,7 @@ "pred": "hasRelatedSynonym", "val": "tunica muscularis", "xrefs": [ - "http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" + "http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" ] } ], @@ -97747,10 +98223,11 @@ } ], "definition": { - "val": "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", + "val": "One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", "xrefs": [ "GOC:ymb", - "ORCiD:0000-0002-9900-7880" + "ORCiD:0000-0002-9900-7880", + "ZFIN:ZDB-PUB-070907-34" ] }, "synonyms": [ @@ -98363,7 +98840,7 @@ "pred": "hasRelatedSynonym", "val": "tunica serosa", "xrefs": [ - "http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" + "http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" ] } ], @@ -121010,7 +121487,10 @@ "xrefs": [ "ZFIN:ZDB-PUB-120106-15" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -121074,7 +121554,10 @@ "ORCiD:0000-0002-2244-7917", "ZFIN:ZDB-PUB-060724-7" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -121169,6 +121652,9 @@ "GOC:tjm" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0002546" @@ -121230,6 +121716,9 @@ "CL:MAH" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0007011" @@ -121262,6 +121751,9 @@ "ISBN:0080923437" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011102" @@ -121294,6 +121786,9 @@ "ISBN:0080923437" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011103" @@ -121326,6 +121821,9 @@ "PMID:23848055" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -121509,6 +122007,9 @@ "ISBN:0721662544" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0000737" @@ -121578,7 +122079,10 @@ "ORCiD:0000-0002-2244-7917", "ZFIN:ZDB-PUB-961014-195" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -124292,7 +124796,10 @@ "ORCID:0000-0002-2244-7917", "ZFIN:ZDB-PUB-961014-594" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -124320,6 +124827,9 @@ "ZFIN:ZDB-PUB-961014-572" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -124583,7 +125093,10 @@ "ZFIN:ZDB-PUB-110110-13", "ZFIN:ZDB-PUB-150512-4" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -124727,6 +125240,9 @@ "ZFIN:ZDB-PUB-120718-30" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0000024" @@ -126947,7 +127463,7 @@ } ], "definition": { - "val": "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes .", + "val": "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes .", "xrefs": [ "GOC:cvs", "ORCID:0000-0002-1009-339X", @@ -126961,6 +127477,33 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005943", + "lbl": "perivitelline fluid", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-03-25T15:52:05Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance.", + "xrefs": [ + "ZFIN:ZDB-PUB-200910-2" + ] + } + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFA_0005944", "lbl": "mural cell", @@ -126998,6 +127541,470 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005945", + "lbl": "long double cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T09:06:25Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "red-sensitive cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasRelatedSynonym", + "val": "unequal double cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-961014-677" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005946", + "lbl": "short double cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T10:53:10Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "green-sensitive cone", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasRelatedSynonym", + "val": "unequal double cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-961014-677" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005947", + "lbl": "long single cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T11:01:04Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "blue-sensitive cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005948", + "lbl": "short single cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T11:10:25Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "UV-sensitive cone", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasExactSynonym", + "val": "ultraviolet-sensitive cone", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005949", + "lbl": "heart lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:47:35Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the heart.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005950", + "lbl": "bulbus arteriosus lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:53:55Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + }, + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "outflow tract lymph vessel", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005951", + "lbl": "cardiac ventricle lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:58:24Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005952", + "lbl": "heart lymphatic system", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:23:44Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymphatic system of the heart.", + "xrefs": [ + "GOC:CVS", + "ORCID:0000-0002-2244-7917" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005953", + "lbl": "coronary capillary plexus", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:26:17Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Capillary plexus that is located in the heart.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005954", + "lbl": "cardiac lymphatic endothelial cluster", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:30:04Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + }, + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "isolated lymph endothelial cells", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005955", + "lbl": "lymphatic endothelial cluster", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:53:02Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005956", + "lbl": "germline stem cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T13:44:39Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "A stem cell that can give rise to cell types of the germ-line.", + "xrefs": [ + "ORCID:0000-0002-4142-7153" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "xrefs": [ + { + "val": "CL:0000014" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005957", + "lbl": "stem cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T13:47:16Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.", + "xrefs": [ + "GOC:tfm" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "xrefs": [ + { + "val": "CL:0000034" + } + ] + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFA_0006000", "lbl": "intermediate hypothalamus", @@ -129751,6 +130758,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -129820,6 +130830,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -129916,6 +130929,9 @@ "CL:curator" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0002321" @@ -129949,6 +130965,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -129985,6 +131004,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -130082,6 +131104,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -130118,6 +131143,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -130856,6 +131884,9 @@ "ZFIN:ZDB-PUB-170409-2" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -130902,6 +131933,9 @@ "ZFIN:ZDB-PUB-170409-2" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -130952,6 +131986,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -130993,6 +132030,9 @@ "ZFIN:ZDB-PUB-190402-19" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -131030,6 +132070,9 @@ "ZFIN:ZDB-PUB-190402-19" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -142311,7 +143354,7 @@ "definition": { "val": "A stem cell that can give rise to cell types of the body other than those of the germ-line.", "xrefs": [ - "GO:CJM" + "GO:cjm" ] }, "subsets": [ @@ -145843,6 +146886,9 @@ "GOC:nv" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011004" @@ -145929,7 +146975,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFA_0009404", - "lbl": "heart valve endothelial cells", + "lbl": "heart valve endothelial cell", "meta": { "basicPropertyValues": [ { @@ -145957,6 +147003,13 @@ "http://purl.obolibrary.org/obo/zfa#cell_slim" ], "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "heart valve endocardial cell", + "xrefs": [ + "ZFIN:ZDB-PUB-200221-32" + ] + }, { "pred": "hasRelatedSynonym", "val": "VEC", @@ -145983,7 +147036,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000000", - "lbl": "Unknown", + "lbl": "unknown", "meta": { "basicPropertyValues": [ { @@ -146004,7 +147057,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000001", - "lbl": "Zygote:1-cell", + "lbl": "zygote:1-cell", "meta": { "basicPropertyValues": [ { @@ -146025,7 +147078,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000002", - "lbl": "Cleavage:2-cell", + "lbl": "cleavage:2-cell", "meta": { "basicPropertyValues": [ { @@ -146046,7 +147099,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000003", - "lbl": "Cleavage:4-cell", + "lbl": "cleavage:4-cell", "meta": { "basicPropertyValues": [ { @@ -146067,7 +147120,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000004", - "lbl": "Cleavage:8-cell", + "lbl": "cleavage:8-cell", "meta": { "basicPropertyValues": [ { @@ -146088,7 +147141,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000005", - "lbl": "Cleavage:16-cell", + "lbl": "cleavage:16-cell", "meta": { "basicPropertyValues": [ { @@ -146109,7 +147162,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000006", - "lbl": "Cleavage:32-cell", + "lbl": "cleavage:32-cell", "meta": { "basicPropertyValues": [ { @@ -146130,7 +147183,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000007", - "lbl": "Cleavage:64-cell", + "lbl": "cleavage:64-cell", "meta": { "basicPropertyValues": [ { @@ -146151,7 +147204,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000008", - "lbl": "Blastula:128-cell", + "lbl": "blastula:128-cell", "meta": { "basicPropertyValues": [ { @@ -146172,7 +147225,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000009", - "lbl": "Blastula:256-cell", + "lbl": "blastula:256-cell", "meta": { "basicPropertyValues": [ { @@ -146193,7 +147246,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000010", - "lbl": "Blastula:512-cell", + "lbl": "blastula:512-cell", "meta": { "basicPropertyValues": [ { @@ -146214,7 +147267,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000011", - "lbl": "Blastula:1k-cell", + "lbl": "blastula:1k-cell", "meta": { "basicPropertyValues": [ { @@ -146235,7 +147288,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000012", - "lbl": "Blastula:High", + "lbl": "blastula:high", "meta": { "basicPropertyValues": [ { @@ -146256,7 +147309,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000013", - "lbl": "Blastula:Oblong", + "lbl": "blastula:oblong", "meta": { "basicPropertyValues": [ { @@ -146277,7 +147330,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000014", - "lbl": "Blastula:Sphere", + "lbl": "blastula:sphere", "meta": { "basicPropertyValues": [ { @@ -146298,7 +147351,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000015", - "lbl": "Blastula:Dome", + "lbl": "blastula:dome", "meta": { "basicPropertyValues": [ { @@ -146319,7 +147372,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000016", - "lbl": "Blastula:30%-epiboly", + "lbl": "blastula:30%-epiboly", "meta": { "basicPropertyValues": [ { @@ -146340,7 +147393,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000017", - "lbl": "Gastrula:50%-epiboly", + "lbl": "gastrula:50%-epiboly", "meta": { "basicPropertyValues": [ { @@ -146361,7 +147414,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000018", - "lbl": "Gastrula:Germ-ring", + "lbl": "gastrula:germ-ring", "meta": { "basicPropertyValues": [ { @@ -146382,7 +147435,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000019", - "lbl": "Gastrula:Shield", + "lbl": "gastrula:shield", "meta": { "basicPropertyValues": [ { @@ -146403,7 +147456,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000020", - "lbl": "Gastrula:75%-epiboly", + "lbl": "gastrula:75%-epiboly", "meta": { "basicPropertyValues": [ { @@ -146424,7 +147477,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000021", - "lbl": "Gastrula:90%-epiboly", + "lbl": "gastrula:90%-epiboly", "meta": { "basicPropertyValues": [ { @@ -146445,7 +147498,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000022", - "lbl": "Gastrula:Bud", + "lbl": "gastrula:bud", "meta": { "basicPropertyValues": [ { @@ -146466,7 +147519,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000023", - "lbl": "Segmentation:1-4 somites", + "lbl": "segmentation:1-4 somites", "meta": { "basicPropertyValues": [ { @@ -146487,7 +147540,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000024", - "lbl": "Segmentation:5-9 somites", + "lbl": "segmentation:5-9 somites", "meta": { "basicPropertyValues": [ { @@ -146508,7 +147561,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000025", - "lbl": "Segmentation:10-13 somites", + "lbl": "segmentation:10-13 somites", "meta": { "basicPropertyValues": [ { @@ -146529,7 +147582,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000026", - "lbl": "Segmentation:14-19 somites", + "lbl": "segmentation:14-19 somites", "meta": { "basicPropertyValues": [ { @@ -146550,7 +147603,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000027", - "lbl": "Segmentation:20-25 somites", + "lbl": "segmentation:20-25 somites", "meta": { "basicPropertyValues": [ { @@ -146571,7 +147624,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000028", - "lbl": "Segmentation:26+ somites", + "lbl": "segmentation:26+ somites", "meta": { "basicPropertyValues": [ { @@ -146592,7 +147645,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000029", - "lbl": "Pharyngula:Prim-5", + "lbl": "pharyngula:prim-5", "meta": { "basicPropertyValues": [ { @@ -146613,7 +147666,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000030", - "lbl": "Pharyngula:Prim-15", + "lbl": "pharyngula:prim-15", "meta": { "basicPropertyValues": [ { @@ -146634,7 +147687,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000031", - "lbl": "Pharyngula:Prim-25", + "lbl": "pharyngula:prim-25", "meta": { "basicPropertyValues": [ { @@ -146655,7 +147708,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000032", - "lbl": "Pharyngula:High-pec", + "lbl": "pharyngula:high-pec", "meta": { "basicPropertyValues": [ { @@ -146676,7 +147729,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000033", - "lbl": "Hatching:Long-pec", + "lbl": "hatching:long-pec", "meta": { "basicPropertyValues": [ { @@ -146697,7 +147750,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000034", - "lbl": "Hatching:Pec-fin", + "lbl": "hatching:pec-fin", "meta": { "basicPropertyValues": [ { @@ -146718,7 +147771,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000035", - "lbl": "Larval:Protruding-mouth", + "lbl": "larval:protruding-mouth", "meta": { "basicPropertyValues": [ { @@ -146739,7 +147792,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000036", - "lbl": "Larval:Day 4", + "lbl": "larval:day 4", "meta": { "basicPropertyValues": [ { @@ -146760,7 +147813,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000037", - "lbl": "Larval:Day 5", + "lbl": "larval:day 5", "meta": { "basicPropertyValues": [ { @@ -146781,7 +147834,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000038", - "lbl": "Larval:Day 6", + "lbl": "larval:day 6", "meta": { "basicPropertyValues": [ { @@ -146802,7 +147855,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000039", - "lbl": "Larval:Days 7-13", + "lbl": "larval:days 7-13", "meta": { "basicPropertyValues": [ { @@ -146823,7 +147876,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000040", - "lbl": "Larval:Days 14-20", + "lbl": "larval:days 14-20", "meta": { "basicPropertyValues": [ { @@ -146844,7 +147897,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000041", - "lbl": "Larval:Days 21-29", + "lbl": "larval:days 21-29", "meta": { "basicPropertyValues": [ { @@ -146865,7 +147918,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000042", - "lbl": "Juvenile:Days 30-44", + "lbl": "juvenile:days 30-44", "meta": { "basicPropertyValues": [ { @@ -146886,7 +147939,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000043", - "lbl": "Juvenile:Days 45-89", + "lbl": "juvenile:days 45-89", "meta": { "basicPropertyValues": [ { @@ -146907,7 +147960,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000044", - "lbl": "Adult", + "lbl": "adult", "meta": { "basicPropertyValues": [ { @@ -146926,9 +147979,121 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000045", + "lbl": "blastula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000046", + "lbl": "cleavage", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000047", + "lbl": "gastrula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000048", + "lbl": "larva", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000049", + "lbl": "segmentation", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000050", + "lbl": "pharyngula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000051", + "lbl": "juvenile", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0007000", + "lbl": "hatching", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "yvonne" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2014-11-05T08:33:09Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFS_0100000", - "lbl": "Stages", + "lbl": "zebrafish stage", "meta": { "basicPropertyValues": [ { diff --git a/zfa-full.obo b/zfa-full.obo index f17f9fe..d771328 100644 --- a/zfa-full.obo +++ b/zfa-full.obo @@ -1,8 +1,8 @@ format-version: 1.2 -data-version: zfa/releases/2022-03-15/zfa-full.owl -date: 08:03:2021 11:16 -saved-by: ceriv -auto-generated-by: OBO-Edit 2.3.1 +data-version: zfa/releases/2022-12-09/zfa-full.owl +date: 29:11:2022 16:29 +saved-by: zfinf +auto-generated-by: OBO-Edit 2.3-beta5 subsetdef: cell_slim "cell_slim" synonymtypedef: PLURAL "PLURAL" default-namespace: zebrafish_anatomical_ontology @@ -10,12 +10,13 @@ treat-xrefs-as-genus-differentia: CARO part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: CL part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: TAO part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: VSAO part_of NCBITaxon:7955 -remark: SVN version: $Revision: 1.100$ ontology: zfa/zfa-full property_value: http://purl.org/dc/elements/1.1/description "ZFA description." xsd:string property_value: http://purl.org/dc/elements/1.1/title "Zebrafish Anatomy Ontology (ZFA)" xsd:string property_value: http://purl.org/dc/terms/license https://creativecommons.org/licenses/by/3.0/ -property_value: owl:versionInfo "2022-03-15" xsd:string +property_value: IAO:0000700 ZFA:0100000 +property_value: IAO:0000700 ZFS:0100000 +property_value: owl:versionInfo "2022-12-09" xsd:string [Term] id: ZFA:0000000 @@ -24,8 +25,8 @@ namespace: zebrafish_anatomy def: "The visible division between epiblast and hypoblast in the gastrula." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000000 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000001 @@ -36,9 +37,9 @@ synonym: "ciliated organ of asymmetry" EXACT [ZFIN:ZDB-PUB-050221-4] xref: TAO:0000001 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000023 ! forerunner cell group -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000077 ! tail bud -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000003 @@ -50,9 +51,9 @@ synonym: "adaxial cells" EXACT PLURAL [] xref: CL:0007016 xref: TAO:0000003 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000279 ! segmental plate -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000004 @@ -62,9 +63,9 @@ def: "Anterior portion of the axial hypoblast." [GOC:cvs, GOC:ymb, ORCiD:0000-00 synonym: "pre-polster" EXACT [ZFIN:ZDB-PUB-051019-5] xref: TAO:0000004 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001378 ! axial hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000005 @@ -74,7 +75,7 @@ def: "Blood vessels that carry blood away from the heart." [GOC:cvs, ORCiD:0000- synonym: "arterial system" RELATED [] xref: TAO:0000005 is_a: ZFA:0005314 ! blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000006 @@ -84,9 +85,9 @@ def: "The anterior round region of the yolk cell present after the yolk extensio synonym: "yolk ball" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000006 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000084 ! yolk -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000007 @@ -96,7 +97,7 @@ def: "A complex mixture of cells suspended in a liquid matrix that delivers nutr xref: TAO:0000007 is_a: ZFA:0001487 ! portion of organism substance relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000008 @@ -109,7 +110,7 @@ xref: TAO:0000008 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001135 ! neural tube relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000009 @@ -121,7 +122,7 @@ xref: TAO:0000009 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001719 ! presumptive cardiac ventricle heart tube relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000010 @@ -130,7 +131,7 @@ namespace: zebrafish_anatomy def: "Anatomical system that functions in circulation and has as its parts the heart and vasculature. The lymphatic system is considered part of the cardiovascular system." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000010 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000011 @@ -199,7 +200,7 @@ namespace: zebrafish_anatomy xref: TAO:0000017 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0000416 ! presumptive endoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000018 @@ -209,9 +210,9 @@ def: "The outer of the two layers of the blastoderm that form during gastrulatio xref: TAO:0000018 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000019 @@ -226,7 +227,7 @@ is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0001127 ! visual system relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000020 @@ -237,7 +238,7 @@ synonym: "extraembryonic structures" EXACT PLURAL [] xref: CARO:0000042 xref: TAO:0000020 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000022 @@ -251,7 +252,7 @@ xref: TAO:0000022 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001218 ! presumptive floor plate relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000023 @@ -264,8 +265,8 @@ synonym: "forerunner cells" EXACT PLURAL [] xref: TAO:0000023 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001126 ! noninvoluting endocytic marginal cell cluster -relationship: end ZFS:0000023 ! Segmentation:1-4 somites -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000023 ! segmentation:1-4 somites +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0000024 @@ -276,7 +277,7 @@ synonym: "ganglion cell layer" EXACT [] xref: TAO:0000024 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000026 @@ -287,8 +288,8 @@ synonym: "hgg" EXACT [] xref: TAO:0000026 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000058 ! polster -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000027 @@ -310,9 +311,9 @@ synonym: "heart primordia" EXACT PLURAL [] xref: TAO:0000028 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001065 ! lateral mesoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000029 @@ -324,7 +325,7 @@ xref: TAO:0000029 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007043 ! hindbrain neural tube relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000030 @@ -336,7 +337,7 @@ xref: TAO:0000030 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000168 ! anterior macula relationship: part_of ZFA:0000700 ! utricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000031 @@ -346,9 +347,9 @@ def: "Portion of tissue that arises from the arise from the lateral edges of the xref: TAO:0000031 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001217 ! presumptive hypochord -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000017 ! endoderm -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000032 @@ -358,7 +359,7 @@ def: "Multi-tissue structure which is the largest portion of diencephalon and is xref: TAO:0000032 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000033 @@ -371,9 +372,9 @@ xref: TAO:0000033 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000121 ! lateral plate mesoderm relationship: develops_from ZFA:0001201 ! ventral lateral mesoderm -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000034 @@ -384,7 +385,7 @@ synonym: "ll" EXACT [] xref: TAO:0000034 is_a: ZFA:0000282 ! sensory system relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000035 @@ -396,7 +397,7 @@ xref: TAO:0000035 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001679 ! solid lens vesicle relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000036 @@ -405,7 +406,7 @@ namespace: zebrafish_anatomy def: "System responsible for the production and movement of bile." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000036 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000037 @@ -416,8 +417,8 @@ synonym: "anatomical structures" EXACT PLURAL [] xref: CARO:0000003 xref: TAO:0000037 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000038 @@ -426,8 +427,8 @@ namespace: zebrafish_anatomy def: "Embryonic structure, the edge of the blastoderm." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000038 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000039 @@ -435,7 +436,7 @@ name: median axial vein namespace: zebrafish_anatomy xref: TAO:0000039 is_a: ZFA:0000082 ! vein -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000040 @@ -445,8 +446,8 @@ def: "Surface structure that will develop into one of the median fins. Extends synonym: "median fin" RELATED [] xref: TAO:0000040 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000041 @@ -455,7 +456,7 @@ namespace: zebrafish_anatomy xref: TAO:0000041 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000042 @@ -469,7 +470,7 @@ xref: TAO:0000042 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007047 ! midbrain hindbrain boundary neural tube relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000043 @@ -490,9 +491,9 @@ def: "Portion of somite 14 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000044 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000045 @@ -502,8 +503,8 @@ def: "A cell population arising from the dorsolateral aspect of the central nerv xref: TAO:0000045 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007082 ! neural plate border -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000046 @@ -516,7 +517,7 @@ xref: TAO:0000046 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001071 ! presumptive neural retina relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000047 @@ -529,7 +530,7 @@ xref: TAO:0000047 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000048 ! olfactory placode relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000048 @@ -540,9 +541,9 @@ synonym: "olfactory placodes" EXACT PLURAL [] xref: TAO:0000048 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007062 ! olfactory field -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000049 @@ -553,7 +554,7 @@ synonym: "optic recesses" EXACT PLURAL [] xref: TAO:0000049 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000050 @@ -564,9 +565,9 @@ synonym: "optic vesicles" EXACT PLURAL [] xref: TAO:0000050 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000570 ! optic primordium -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000051 @@ -579,8 +580,8 @@ synonym: "ov" EXACT [] xref: TAO:0000051 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000138 ! otic placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000052 @@ -600,9 +601,9 @@ def: "Embryonic structure part of the mesoderm fated to become segmental plate." synonym: "presumptive segmental plates" EXACT PLURAL [] xref: TAO:0000053 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000054 @@ -622,7 +623,7 @@ def: "Swollen region of the anterior foregut, posterior to the mouth and anterio xref: TAO:0000056 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000058 @@ -633,9 +634,9 @@ synonym: "pillow" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000058 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000004 ! anterior axial hypoblast -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000060 ! prechordal plate -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000059 @@ -654,9 +655,9 @@ namespace: zebrafish_anatomy def: "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000060 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001204 ! axial mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000062 @@ -666,10 +667,10 @@ def: "Embryonic structure that gives rise to the forebrain." [GOC:mh, ORCiD:0000 synonym: "presumptive prosencephalon" EXACT [] xref: TAO:0000062 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000063 @@ -683,7 +684,7 @@ synonym: "prospective neuroectoderm" EXACT [] synonym: "prospective vegetal ectoderm" EXACT [] xref: TAO:0000063 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0000064 @@ -694,9 +695,9 @@ synonym: "outer layer optic cup" EXACT [] synonym: "presumptive pigmented epithelia" EXACT PLURAL [] xref: TAO:0000064 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000066 @@ -706,9 +707,9 @@ def: "An inward fold on the surface of the embryonic ectoderm that develops into synonym: "anus" RELATED [] xref: TAO:0000066 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000067 @@ -718,9 +719,9 @@ def: "Intermediate mesoderm that is located beneath the anterior somites and giv synonym: "pronephric primordium" EXACT [ZFIN:ZDB-PUB-000606-4] xref: TAO:0000067 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0001206 ! intermediate mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000068 @@ -730,9 +731,9 @@ def: "Cluster of cells in the neural plate that have the potential to become neu synonym: "proneural clusters" EXACT PLURAL [] xref: TAO:0000068 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000069 @@ -763,9 +764,9 @@ synonym: "Spemann Mangold organizer" EXACT [] synonym: "Spemann's organizer" EXACT [] xref: TAO:0000071 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000072 @@ -782,7 +783,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 5 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000073 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000074 @@ -791,7 +792,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 26 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000074 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000075 @@ -804,7 +805,7 @@ xref: TAO:0000075 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0007042 ! spinal cord neural tube relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000076 @@ -816,7 +817,7 @@ xref: TAO:0000076 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005335 ! swim bladder bud relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000077 @@ -827,8 +828,8 @@ synonym: "tailbud" EXACT [] xref: TAO:0000077 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000078 @@ -849,7 +850,7 @@ xref: TAO:0000079 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000571 ! presumptive telencephalon relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000080 @@ -858,7 +859,7 @@ namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the trigeminal ganglion." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000080 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000081 @@ -866,7 +867,7 @@ name: trunk mesenchyme namespace: zebrafish_anatomy xref: TAO:0000081 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000082 @@ -876,7 +877,7 @@ def: "Vessels that carry blood to the heart." [GOC:cvs, ORCiD:0000-0002-2244-791 synonym: "venous system" RELATED [] xref: TAO:0000082 is_a: ZFA:0005314 ! blood vessel -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000083 @@ -884,7 +885,7 @@ name: ventral mesoderm namespace: zebrafish_anatomy xref: TAO:0000083 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000084 @@ -897,7 +898,7 @@ synonym: "yolk cell" EXACT [] xref: CL:0000428 xref: TAO:0000084 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000085 @@ -913,7 +914,7 @@ synonym: "apical fold pectoral fin" EXACT [] xref: TAO:0000085 xref: TAO:0000736 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec relationship: part_of ZFA:0000141 ! pectoral fin bud [Term] @@ -925,9 +926,9 @@ synonym: "enveloping layer" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000086 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001484 ! superficial blastomere -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000088 @@ -941,8 +942,8 @@ xref: TAO:0000088 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000084 ! yolk relationship: develops_from ZFA:0000541 ! marginal blastomere -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000011 ! Blastula:1k-cell +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000011 ! blastula:1k-cell [Term] id: ZFA:0000089 @@ -953,7 +954,7 @@ synonym: "fin fold actinotrichia" EXACT PLURAL [] synonym: "median fin fold actinotrichium" EXACT [] xref: TAO:0000089 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000040 ! median fin fold [Term] @@ -963,7 +964,7 @@ namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000090 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin [Term] @@ -978,9 +979,9 @@ synonym: "presumptive notochord" EXACT [] xref: TAO:0000091 xref: TAO:0001219 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001204 ! axial mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000092 @@ -990,7 +991,7 @@ def: "Organism subdivision running along the rostral-caudal axis of the early em synonym: "midline" EXACT [] xref: TAO:0000092 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000093 @@ -1001,7 +1002,7 @@ subset: cell_slim synonym: "blastomeres" EXACT PLURAL [] xref: TAO:0000093 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000015 ! Blastula:Dome +relationship: end ZFS:0000015 ! blastula:dome relationship: part_of ZFA:0001175 ! blastodisc [Term] @@ -1015,9 +1016,9 @@ synonym: "posterior blood island" RELATED [] synonym: "posterior ICM" EXACT [] xref: TAO:0000094 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000033 ! intermediate cell mass of mesoderm -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000095 @@ -1030,7 +1031,7 @@ xref: TAO:0000095 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0001216 ! splanchnocranium relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000096 @@ -1047,7 +1048,7 @@ namespace: zebrafish_anatomy def: "Artery originating at the junction of the first two aortic arches and supplying the anterior brain." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000097 is_a: ZFA:0000005 ! artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000098 @@ -1078,7 +1079,7 @@ xref: TAO:0000100 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001442 ! upper rhombic lip relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000101 @@ -1089,7 +1090,7 @@ xref: TAO:0000101 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000574 ! presumptive diencephalon relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000102 @@ -1098,9 +1099,9 @@ namespace: zebrafish_anatomy def: "Region of the median fin fold that develops into the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000102 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000103 @@ -1154,7 +1155,7 @@ xref: TAO:0000105 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000016 ! ectoderm relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000106 @@ -1164,9 +1165,9 @@ def: "The posterior elongated region of the yolk cell that forms during the segm synonym: "yolk extension" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000106 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000084 ! yolk -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000107 @@ -1179,7 +1180,7 @@ is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001678 ! immature eye relationship: part_of ZFA:0001114 ! head relationship: part_of ZFA:0001127 ! visual system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000108 @@ -1189,7 +1190,7 @@ def: "Surface structure involved in locomotion." [TAO:WD] synonym: "fins" EXACT PLURAL [] xref: TAO:0000108 is_a: ZFA:0000292 ! surface structure -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000109 @@ -1201,7 +1202,7 @@ xref: TAO:0000109 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007041 ! forebrain neural tube relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000110 @@ -1218,7 +1219,7 @@ xref: TAO:0000110 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000111 @@ -1228,8 +1229,8 @@ def: "Embryonic structure that forms as a thickened annulus at the blastoderm ri xref: TAO:0000111 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000112 @@ -1243,7 +1244,7 @@ xref: TAO:0000112 is_a: ZFA:0001512 ! anatomical group relationship: develops_from ZFA:0000017 ! endoderm relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000113 @@ -1252,7 +1253,7 @@ namespace: zebrafish_anatomy def: "Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head." [http://www.Biology-Text.com] xref: TAO:0000113 is_a: ZFA:0000393 ! mesenchyme -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000114 @@ -1264,7 +1265,7 @@ is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000360 ! heart tube relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000115 @@ -1276,9 +1277,9 @@ synonym: "rudimentary heart" EXACT [] xref: TAO:0000115 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000028 ! heart primordium -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000116 @@ -1290,7 +1291,7 @@ xref: TAO:0000116 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula relationship: part_of ZFA:0000374 ! lagena -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000117 @@ -1301,9 +1302,9 @@ synonym: "mesendoderm" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000117 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000118 @@ -1315,7 +1316,7 @@ xref: TAO:0000118 is_a: ZFA:0000496 ! compound organ relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000119 @@ -1327,7 +1328,7 @@ synonym: "intermediate cell layer" EXACT [] xref: TAO:0000119 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000120 @@ -1339,7 +1340,7 @@ synonym: "llg" EXACT [] xref: TAO:0000120 is_a: ZFA:0000013 ! cranial ganglion relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000121 @@ -1349,8 +1350,8 @@ synonym: "lateral plate" EXACT [] synonym: "LPM" EXACT [] xref: TAO:0000121 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000122 @@ -1360,10 +1361,10 @@ def: "Ectodermal primordium of the lens of the eye." [ZFIN:ZDB-PUB-961014-576] synonym: "lens placodes" EXACT PLURAL [] xref: TAO:0000122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000016 ! ectoderm relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000123 @@ -1375,7 +1376,7 @@ is_a: ZFA:0001491 ! solid compound organ relationship: develops_from ZFA:0000124 ! liver primordium relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000124 @@ -1386,9 +1387,9 @@ synonym: "liver bud" EXACT [] xref: TAO:0000124 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000125 @@ -1400,7 +1401,7 @@ synonym: "neuromasts mandibular" EXACT PLURAL [] xref: TAO:0000125 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000259 ! mandibular lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000126 @@ -1411,7 +1412,7 @@ synonym: "autocentrum" EXACT [] xref: TAO:0000126 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0001189 ! vertebra -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000127 @@ -1429,7 +1430,7 @@ xref: TAO:0000128 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007039 ! midbrain neural tube relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000130 @@ -1442,7 +1443,7 @@ synonym: "olfactory cavity" EXACT [] xref: TAO:0000130 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000131 @@ -1453,8 +1454,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000131 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000132 ! neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000025 ! segmentation:10-13 somites +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000132 @@ -1465,8 +1466,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000132 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000063 ! presumptive neural plate -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000133 @@ -1477,8 +1478,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000133 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000131 ! neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000135 @@ -1489,7 +1490,7 @@ synonym: "notocord" EXACT [] xref: TAO:0000135 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000091 ! axial chorda mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000136 @@ -1501,7 +1502,7 @@ synonym: "neuromasts otic" EXACT PLURAL [] xref: TAO:0000136 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000464 ! otic lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000137 @@ -1512,9 +1513,9 @@ synonym: "optic stalks" EXACT PLURAL [] xref: TAO:0000137 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007031 ! anterior neural rod -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000138 @@ -1523,7 +1524,7 @@ namespace: zebrafish_anatomy def: "Primordium of the ear epithelium before it hollows into the otic vesicle, present beside the hindbrain rudiment in the mid-segmentation period. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000138 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001138 ! vestibuloauditory system [Term] @@ -1536,7 +1537,7 @@ is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001390 ! pancreatic bud relationship: part_of ZFA:0001371 ! pancreatic system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000141 @@ -1547,8 +1548,8 @@ synonym: "pectoral fin buds" EXACT PLURAL [] xref: TAO:0000141 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001453 ! pectoral fin field -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000142 @@ -1558,7 +1559,7 @@ def: "Nervous structures including ganglia outside of the central nervous system synonym: "pns" EXACT [] xref: TAO:0000142 is_a: ZFA:0000396 ! nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000143 @@ -1569,7 +1570,7 @@ synonym: "retinal photoreceptor layers" EXACT PLURAL [] xref: TAO:0000143 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000144 @@ -1585,7 +1586,7 @@ xref: TAO:0000144 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000064 ! presumptive retinal pigmented epithelium relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000146 @@ -1595,9 +1596,9 @@ def: "Embryonic structure that gives rise to the brain." [GOC:mh, ORCiD:0000-000 synonym: "brain rudiment" EXACT [] xref: TAO:0000146 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000148 @@ -1607,10 +1608,10 @@ def: "Embryonic structure that gives rise to the midbrain." [GOC:mh, ORCiD:0000- synonym: "presumptive mesencephalon" EXACT [] xref: TAO:0000148 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000149 @@ -1620,10 +1621,10 @@ def: "Multi-tissue structure that arises from the heart rudiment and will become xref: TAO:0000149 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000115 ! heart rudiment -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000150 @@ -1634,9 +1635,9 @@ synonym: "pronephric ducts" EXACT PLURAL [] xref: TAO:0000150 is_a: ZFA:0005171 ! duct relationship: develops_from ZFA:0000067 ! pronephric mesoderm -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000151 @@ -1648,10 +1649,10 @@ synonym: "pronephric nephron" EXACT [] xref: TAO:0000151 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000067 ! pronephric mesoderm -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000152 @@ -1663,7 +1664,7 @@ xref: TAO:0000152 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001202 ! optic cup relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000153 @@ -1685,7 +1686,7 @@ xref: TAO:0000154 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001722 ! presumptive sinus venosus relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000155 @@ -1696,9 +1697,9 @@ synonym: "somitic mesoderm" RELATED [] xref: TAO:0000155 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000279 ! segmental plate -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000156 @@ -1707,7 +1708,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 20 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000156 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000157 @@ -1716,7 +1717,7 @@ namespace: zebrafish_anatomy def: "Posteriormost undifferentiated mesodermal component of early tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000157 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000158 @@ -1731,7 +1732,7 @@ is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001581 ! ural centrum 2 relationship: develops_from ZFA:0001583 ! preural centrum 1+ ural centrum 1 relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000159 @@ -1747,7 +1748,7 @@ xref: TAO:0000159 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000160 @@ -1762,7 +1763,7 @@ is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000761 ! basal plate midbrain region relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000161 @@ -1787,8 +1788,8 @@ def: "The ectodermal rudiment of the trigeminal ganglion, distinguishable during synonym: "trigeminal placodes" EXACT PLURAL [] xref: TAO:0000162 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000163 @@ -1798,7 +1799,7 @@ def: "System that removes and collects metabolic waste from the blood while main synonym: "urinary system" RELATED [] xref: TAO:0000163 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000164 @@ -1806,8 +1807,8 @@ name: ventral mesenchyme namespace: zebrafish_anatomy xref: TAO:0000164 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000165 @@ -1838,7 +1839,7 @@ xref: TAO:0000166 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000225 ! lateral crista primordium relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000167 @@ -1858,7 +1859,7 @@ synonym: "am" EXACT [] synonym: "anterior sensory patch" EXACT [] xref: TAO:0000168 is_a: ZFA:0000386 ! macula -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001671 ! macula communis [Term] @@ -1909,7 +1910,7 @@ xref: TAO:0000173 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001712 ! presumptive bulbus arteriosus relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000174 @@ -1959,7 +1960,7 @@ def: "Portion of the fish's body that is posterior to the vent and anterior to t xref: TAO:0000178 is_a: ZFA:0001308 ! organism subdivision relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000179 @@ -1983,7 +1984,7 @@ is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0001286 ! caudal vein plexus relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000181 @@ -2028,7 +2029,7 @@ synonym: "cleithra" EXACT PLURAL [] xref: TAO:0000184 is_a: ZFA:0001590 ! dermal bone relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000185 @@ -2056,7 +2057,7 @@ name: corpus cerebelli namespace: zebrafish_anatomy def: "Brain structure which is one of three parts of the cerebellum and is the entry point for a posterior cerebellar tract that carries cerebellar afferents from many brain stem nuclei. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] synonym: "cerebellar corpus" EXACT [] -synonym: "corpus cerebelli granular layer " EXACT [ZFIN:ZDB-PUB-961014-1280] +synonym: "corpus cerebelli granular layer" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "corpus cerebellum" EXACT PLURAL [] xref: TAO:0000188 is_a: ZFA:0001488 ! multi-tissue structure @@ -2081,7 +2082,7 @@ synonym: "ganglia" EXACT PLURAL [] xref: TAO:0000190 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000191 @@ -2216,7 +2217,7 @@ xref: TAO:0000204 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000017 ! endoderm relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000205 @@ -2229,7 +2230,7 @@ synonym: "LSV" RELATED [] xref: TAO:0000205 is_a: ZFA:0005277 ! skeletal muscle relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000206 @@ -2250,7 +2251,7 @@ namespace: zebrafish_anatomy def: "Musculature part of fin." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000207 is_a: ZFA:0000548 ! musculature system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000208 @@ -2262,7 +2263,7 @@ is_a: ZFA:0000496 ! compound organ relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000209 @@ -2282,7 +2283,7 @@ synonym: "nucleus praeopticus magnocellularis, pars gigantocellularis" EXACT [] xref: TAO:0000210 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000248 ! magnocellular preoptic nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000211 @@ -2317,7 +2318,7 @@ synonym: "habenular nucleus" EXACT [] xref: TAO:0000213 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000214 @@ -2359,7 +2360,7 @@ xref: TAO:0000217 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0000051 ! otic vesicle relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000219 @@ -2381,7 +2382,7 @@ synonym: "lateral semicircular canals" EXACT PLURAL [] synonym: "lateral semicircular duct" EXACT [] xref: TAO:0000220 is_a: ZFA:0000431 ! semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000221 @@ -2434,9 +2435,9 @@ def: "Is an otic epithelium that will mature into the lateral crista." [GOC:ymb, synonym: "lateral crista primordia" EXACT PLURAL [] xref: TAO:0000225 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000226 @@ -2451,7 +2452,7 @@ relationship: overlaps ZFA:0005420 ! autopalatine-lateral ethmoid joint relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000227 @@ -2474,9 +2475,9 @@ synonym: "lateral line primordia" EXACT PLURAL [] synonym: "llp" EXACT [] xref: TAO:0000228 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000229 @@ -2510,7 +2511,7 @@ xref: TAO:0000231 xref: TAO:0001799 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000232 @@ -2521,7 +2522,7 @@ synonym: "lateral semicircular canal primordia" RELATED PLURAL [] synonym: "lateral semicircular canal primordium" RELATED [] xref: TAO:0000232 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000233 @@ -2536,7 +2537,7 @@ synonym: "mandibular valve" EXACT [] xref: TAO:0000233 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000234 @@ -2548,7 +2549,7 @@ xref: TAO:0000234 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula relationship: part_of ZFA:0000559 ! otolith organ -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000235 @@ -2599,7 +2600,7 @@ xref: TAO:0000239 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001537 ! mesocoracoid cartilage relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000240 @@ -2614,7 +2615,7 @@ relationship: overlaps ZFA:0005469 ! hyomandibula-metapterygoid joint relationship: overlaps ZFA:0005486 ! quadrate-metapterygoid joint relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000241 @@ -2632,7 +2633,7 @@ def: "Gonochoristic organism that can produce male gametes." [GOC:mh, ORCiD:0000 xref: CARO:0000027 xref: TAO:0000242 is_a: ZFA:0001094 ! whole organism -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000243 @@ -2646,7 +2647,7 @@ xref: TAO:0000243 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0005227 ! protoneuromast relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000244 @@ -2736,7 +2737,7 @@ synonym: "optic tracts" EXACT PLURAL [] synonym: "tractus opticus" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000252 is_a: ZFA:0000338 ! diencephalic white matter -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000253 @@ -2761,9 +2762,9 @@ comment: During normal development, the exocrine anlage arises from bilateral se synonym: "pancreatic anlage" EXACT [ZFIN:ZDB-PUB-050623-3] xref: TAO:0000254 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000255 @@ -2795,7 +2796,7 @@ synonym: "pectoral fin cartilages" EXACT PLURAL [] xref: TAO:0000257 is_a: ZFA:0001543 ! paired fin cartilage relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000258 @@ -2811,13 +2812,13 @@ relationship: part_of ZFA:0001184 ! pelvic fin id: ZFA:0000259 name: mandibular lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "mandibular lateral lines" EXACT PLURAL [] synonym: "mandibular line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000259 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000260 @@ -2880,7 +2881,7 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become dorsal mesoderm. Determined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000265 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000266 @@ -2903,7 +2904,7 @@ synonym: "stratum nervosum bulbi olfactorii" EXACT [] xref: TAO:0000267 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000268 @@ -2990,7 +2991,7 @@ xref: TAO:0000277 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001704 ! scale primordium relationship: part_of ZFA:0001183 ! dermal superficial region -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000278 @@ -3010,9 +3011,9 @@ synonym: "presomitic mesoderm" EXACT [] synonym: "PSM" EXACT [] xref: TAO:0000279 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000255 ! paraxial mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000280 @@ -3036,7 +3037,7 @@ xref: TAO:0000281 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001099 ! immature hair cell posterior macula relationship: part_of ZFA:0000558 ! posterior macula -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000282 @@ -3047,7 +3048,7 @@ synonym: "sensory systems" EXACT PLURAL [] xref: TAO:0000282 is_a: ZFA:0001439 ! anatomical system relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000284 @@ -3072,7 +3073,7 @@ xref: TAO:0000285 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000286 @@ -3091,7 +3092,7 @@ name: superior caudal dorsal flexor namespace: zebrafish_anatomy def: "Paired, deep caudal fin muscles that originate from the 30th vertebra and extend toward the dorsal base of the caudal fin where they insert broadly on fin rays." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] synonym: "CDS" RELATED [] -synonym: "flexor caudalis dorsalis superioris " EXACT [] +synonym: "flexor caudalis dorsalis superioris" EXACT [] synonym: "superior dorsal flexor" EXACT [] xref: TAO:0000287 is_a: ZFA:0005271 ! flexor muscle @@ -3141,7 +3142,7 @@ def: "Organism subdivision which is the collection of anatomical structures on t synonym: "surface structures" EXACT PLURAL [] xref: TAO:0000292 is_a: ZFA:0001308 ! organism subdivision -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000293 @@ -3175,7 +3176,7 @@ xref: TAO:0000295 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000080 ! trigeminal neural crest relationship: develops_from ZFA:0000162 ! trigeminal placode -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000296 @@ -3204,7 +3205,7 @@ xref: TAO:0000298 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0000066 ! proctodeum relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000299 @@ -3283,7 +3284,7 @@ synonym: "hypothalamic sulcus" RELATED [] xref: TAO:0000305 is_a: ZFA:0001690 ! groove relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000306 @@ -3312,7 +3313,7 @@ is_a: ZFA:0001590 ! dermal bone relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000309 @@ -3322,9 +3323,9 @@ def: "The portion of the YSL that is outside of the blastoderm margin during epi synonym: "E-YSL" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000309 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000013 ! Blastula:Oblong +relationship: start ZFS:0000013 ! blastula:oblong [Term] id: ZFA:0000310 @@ -3345,7 +3346,7 @@ def: "Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. xref: TAO:0000311 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0007049 ! adductor mandibulae -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000312 @@ -3433,7 +3434,7 @@ synonym: "branchiostegal membranes" EXACT PLURAL [] xref: TAO:0000319 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000320 @@ -3475,7 +3476,7 @@ relationship: develops_from ZFA:0001405 ! ethmoid cartilage relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000324 @@ -3523,7 +3524,7 @@ def: "Musculature system of the pharyngeal and head regions." [GOC:cvs, ORCiD:00 synonym: "head muscles" RELATED [] xref: TAO:0000328 is_a: ZFA:0000548 ! musculature system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000329 @@ -3542,7 +3543,7 @@ synonym: "cloaca lumen" EXACT [] xref: TAO:0000330 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000331 @@ -3565,7 +3566,7 @@ is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid relationship: overlaps ZFA:0005470 ! inter-coracoid joint relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000333 @@ -3616,7 +3617,7 @@ synonym: "diencephalic tract/commissure" EXACT [] xref: TAO:0000338 is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000339 @@ -3625,7 +3626,7 @@ namespace: zebrafish_anatomy def: "Anatomical system that processes ingested substances." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000339 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000340 @@ -3679,14 +3680,14 @@ is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon id: ZFA:0000344 name: middle lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "middle lateral lines" EXACT PLURAL [] xref: TAO:0000344 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005118 ! middle lateral line primordium relationship: part_of ZFA:0001470 ! anterior lateral line relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000345 @@ -3763,7 +3764,7 @@ synonym: "stratum cellulare externum bulbi olfactorii" EXACT [] xref: TAO:0000352 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000353 @@ -3795,9 +3796,9 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the midbrain." [GOC:CVS, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000355 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000356 @@ -3827,7 +3828,7 @@ def: "Portion of tissue which is the innermost layer of the corpus cerebelli and xref: TAO:0000358 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000359 @@ -3845,10 +3846,10 @@ def: "Cavitated compound organ that will become the adult heart following loopin xref: TAO:0000360 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000149 ! primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000362 @@ -3891,7 +3892,7 @@ xref: TAO:0000365 is_a: ZFA:0001590 ! dermal bone relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000366 @@ -3990,7 +3991,7 @@ xref: TAO:0000376 is_a: ZFA:0001590 ! dermal bone relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000379 @@ -4050,7 +4051,7 @@ synonym: "levators arcus palatini" EXACT PLURAL [] xref: TAO:0000384 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000385 @@ -4072,7 +4073,7 @@ synonym: "sensory patch" EXACT [] xref: TAO:0000386 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000387 @@ -4086,7 +4087,7 @@ synonym: "nX" EXACT [] synonym: "vagal lobe" RELATED [] is_a: ZFA:0001658 ! hindbrain nucleus relationship: part_of ZFA:0000297 ! vagal lobe -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000388 @@ -4145,7 +4146,7 @@ namespace: zebrafish_anatomy def: "A mesh-like cell arrangement, less compact than an epithelium." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000393 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000394 @@ -4155,7 +4156,7 @@ def: "Portion of tissue which is the outermost layer of the corpus cerebelli and xref: TAO:0000394 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000395 @@ -4175,7 +4176,7 @@ namespace: zebrafish_anatomy def: "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000396 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000397 @@ -4209,12 +4210,12 @@ relationship: part_of ZFA:0001101 ! gustatory system id: ZFA:0000400 name: occipital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "supratemporal lateral line" EXACT [] xref: TAO:0000400 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000401 @@ -4237,7 +4238,7 @@ xref: TAO:0000402 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000079 ! telencephalon relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000403 @@ -4290,7 +4291,7 @@ synonym: "pectoral girdles" EXACT PLURAL [] xref: TAO:0000407 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000408 @@ -4320,9 +4321,9 @@ def: "Is an otic epithelium that will mature into the posterior crista." [GOC:ym synonym: "posterior crista primordia" EXACT PLURAL [] xref: TAO:0000411 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000412 @@ -4333,7 +4334,7 @@ synonym: "posterior semicircular canal primordia" RELATED PLURAL [] synonym: "posterior semicircular canal primordium" RELATED [] xref: TAO:0000412 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000413 @@ -4347,7 +4348,7 @@ is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005272 ! immature gonad relationship: part_of ZFA:0000632 ! reproductive system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000414 @@ -4356,9 +4357,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that is fated to become cephalic mesoderm." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000414 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000415 @@ -4376,7 +4377,7 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become endoderm. Determined by fate mapping." [ZFIN:ZDB-PUB-961014-608] xref: TAO:0000416 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000417 @@ -4388,9 +4389,9 @@ synonym: "presumptive spinal cord neural plate" EXACT [] synonym: "presumptive spinal cord neural rod" EXACT [] xref: TAO:0000417 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0007015 ! posterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000418 @@ -4443,7 +4444,7 @@ is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0005904 ! retroarticular process relationship: overlaps ZFA:0005618 ! anguloarticular-retroarticular joint relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000423 @@ -4455,18 +4456,18 @@ synonym: "rostral cardinal vein" EXACT [] xref: TAO:0000423 is_a: ZFA:0000082 ! vein relationship: part_of ZFA:0000096 ! cardinal system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000424 name: opercular lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "opercular lateral lines" EXACT PLURAL [] xref: TAO:0000424 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000425 @@ -4545,7 +4546,7 @@ synonym: "semicircular duct" EXACT [] xref: TAO:0000431 is_a: ZFA:0007114 ! anatomical conduit relationship: part_of ZFA:0005409 ! pars superior ear -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000433 @@ -4563,7 +4564,7 @@ name: skeletal system namespace: zebrafish_anatomy xref: TAO:0000434 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000435 @@ -4576,7 +4577,7 @@ synonym: "optic nerve" EXACT [] xref: TAO:0000435 is_a: ZFA:0000641 ! cranial nerve relationship: part_of ZFA:0000338 ! diencephalic white matter -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000436 @@ -4608,7 +4609,7 @@ synonym: "phy" EXACT [] xref: TAO:0000438 is_a: ZFA:0000859 ! specialized hemal arch and spine relationship: part_of ZFA:0000557 ! preural 1 vertebra -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000439 @@ -4651,19 +4652,19 @@ synonym: "sn" EXACT [] xref: TAO:0000442 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000443 name: supraorbital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:JCN 421-\:189-198] +def: "One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "supraorbital lateral lines" EXACT PLURAL [] synonym: "supraorbital line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000443 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000444 @@ -4690,7 +4691,7 @@ xref: TAO:0000445 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000446 @@ -4708,7 +4709,7 @@ synonym: "tela choroidea" RELATED [] xref: TAO:0000447 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001355 ! primitive meninx -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000448 @@ -4750,11 +4751,11 @@ synonym: "breathing valve" RELATED [] synonym: "buccal valve" RELATED [] synonym: "maxillary valve" EXACT [] synonym: "upper internal lip" RELATED [ZFIN:ZDB-PUB-060921-12] -synonym: "upper semilunar valve " EXACT [ZFIN:ZDB-PUB-060921-12] +synonym: "upper semilunar valve" EXACT [ZFIN:ZDB-PUB-060921-12] xref: TAO:0000451 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000452 @@ -4778,7 +4779,7 @@ synonym: "vagus nerve" EXACT [] xref: TAO:0000453 is_a: ZFA:0000641 ! cranial nerve relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000454 @@ -4856,7 +4857,7 @@ synonym: "Weberian ossicles" EXACT PLURAL [] xref: TAO:0000461 is_a: ZFA:0001491 ! solid compound organ relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000462 @@ -4881,7 +4882,7 @@ is_a: ZFA:0000172 ! branchial muscle id: ZFA:0000464 name: otic lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "otic lateral lines" EXACT PLURAL [] xref: TAO:0000464 is_a: ZFA:0001469 ! lateral line @@ -4896,7 +4897,7 @@ synonym: "adductor opercula" EXACT [] synonym: "adductor operculae" EXACT PLURAL [] xref: TAO:0000465 is_a: ZFA:0000521 ! hyoid muscle -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000466 @@ -4932,9 +4933,9 @@ def: "Is an otic epithelium that will mature into the anterior crista." [GOC:ymb synonym: "anterior crista primordia" EXACT PLURAL [] xref: TAO:0000468 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000469 @@ -4945,7 +4946,7 @@ synonym: "anterior semicircular canal primordia" RELATED PLURAL [] synonym: "anterior semicircular canal primordium" RELATED [] xref: TAO:0000469 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000470 @@ -4968,7 +4969,7 @@ xref: TAO:0000471 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001718 ! presumptive atrium heart tube relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000472 @@ -5042,7 +5043,7 @@ relationship: develops_from ZFA:0005077 ! vascular cord relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000479 @@ -5140,7 +5141,7 @@ synonym: "ceratobranchial bones" EXACT PLURAL [] xref: TAO:0000488 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000490 @@ -5197,7 +5198,7 @@ synonym: "dermosphenotic" EXACT [] xref: TAO:0000495 is_a: ZFA:0000376 ! infraorbital relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000496 @@ -5209,7 +5210,7 @@ xref: CARO:0000024 xref: TAO:0000496 is_a: ZFA:0000037 ! anatomical structure relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000497 @@ -5227,13 +5228,13 @@ id: ZFA:0000498 name: dilatator operculi namespace: zebrafish_anatomy def: "Mandibular muscle that inserts along the dorsolateral faces of the opercles. Responsible for opercular abduction." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-020703-2, ZFIN:ZDB-PUB-080306-33] -synonym: " dilatator opercula" EXACT [] +synonym: "dilatator opercula" EXACT [] synonym: "dilator opercula" RELATED [] synonym: "dilators operculi" RELATED PLURAL [] xref: TAO:0000498 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000499 @@ -5344,7 +5345,7 @@ def: "Brain structure which is part of the diencephalon and consists of the dors xref: TAO:0000509 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000510 @@ -5370,7 +5371,7 @@ namespace: zebrafish_anatomy def: "Hindbrain nucleus that doesn't project to the spinal cord." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-970218-12] synonym: "lobus facialis" EXACT [] synonym: "LVII" EXACT [ZFIN:ZDB-PUB-961014-1280] -synonym: "tuberculum impar of Herrick " RELATED [] +synonym: "tuberculum impar of Herrick" RELATED [] xref: TAO:0000512 is_a: ZFA:0001658 ! hindbrain nucleus relationship: part_of ZFA:0000545 ! medulla oblongata @@ -5385,7 +5386,7 @@ synonym: "fast muscle cells somite 1" EXACT PLURAL [] synonym: "fast muscle fiber somite 1" EXACT [] xref: TAO:0000513 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 [Term] @@ -5401,7 +5402,7 @@ relationship: overlaps ZFA:0005608 ! frontal-parietal joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000516 @@ -5422,7 +5423,7 @@ xref: TAO:0001352 is_a: ZFA:0001477 ! portion of tissue is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000517 @@ -5497,12 +5498,12 @@ relationship: part_of ZFA:0000542 ! medial column id: ZFA:0000524 name: infraorbital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "infraorbital line" EXACT [] xref: TAO:0000524 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000525 @@ -5523,7 +5524,7 @@ synonym: "intermuscular bones" EXACT PLURAL [] xref: TAO:0000526 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000527 @@ -5559,7 +5560,7 @@ is_a: ZFA:0001490 ! cavitated compound organ relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000530 @@ -5647,7 +5648,7 @@ def: "Hyoid muscle that originates at the ventrolateral margin of the pterotic a synonym: "levator operculae" EXACT [] xref: TAO:0000537 is_a: ZFA:0000521 ! hyoid muscle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000538 @@ -5688,7 +5689,7 @@ subset: cell_slim synonym: "marginal blastomeres" EXACT PLURAL [] xref: TAO:0000541 is_a: ZFA:0000093 ! blastomere -relationship: start ZFS:0000005 ! Cleavage:16-cell +relationship: start ZFS:0000005 ! cleavage:16-cell [Term] id: ZFA:0000542 @@ -5746,7 +5747,7 @@ is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001290 ! stomodeum relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000548 @@ -5755,14 +5756,14 @@ namespace: zebrafish_anatomy def: "Anatomical system consisting of the cardiac, skeletal and smooth muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000548 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000549 name: posttemporal namespace: zebrafish_anatomy def: "Paired fin bone that attaches the pectoral girdle to the skull via two projections contacting the epiotic and intercalar bones, and carry the main laterosensory canal." [GOC:mh, ORCiD:0000-0001-9114-8737] -synonym: "post-temporal " RELATED [] +synonym: "post-temporal" RELATED [] synonym: "postemporal" EXACT [] xref: TAO:0000549 is_a: ZFA:0001590 ! dermal bone @@ -5782,7 +5783,7 @@ xref: TAO:0000550 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000551 @@ -5822,7 +5823,7 @@ xref: TAO:0000554 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0001431 ! primitive olfactory epithelium relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000555 @@ -5836,7 +5837,7 @@ synonym: "opercular cover" RELATED [ZFIN:ZDB-PUB-030304-18] synonym: "operculum" EXACT [] xref: TAO:0000555 is_a: ZFA:0000292 ! surface structure -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000556 @@ -5847,7 +5848,7 @@ synonym: "chiasma opticum" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "optic commissure" EXACT [] xref: TAO:0000556 is_a: ZFA:0000338 ! diencephalic white matter -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000557 @@ -5871,7 +5872,7 @@ synonym: "posterior sensory patch" EXACT [] synonym: "posteromedial macula" EXACT [] xref: TAO:0000558 is_a: ZFA:0000386 ! macula -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001671 ! macula communis [Term] @@ -5883,7 +5884,7 @@ synonym: "otolith organs" EXACT PLURAL [] xref: TAO:0000559 is_a: ZFA:0001490 ! cavitated compound organ relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000560 @@ -5921,7 +5922,7 @@ is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001000 ! mesenchyme pectoral fin relationship: has_developmental_contribution_from ZFA:0005924 ! middle migratory muscle precursor stream relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000564 @@ -5943,7 +5944,7 @@ synonym: "pelvic girdles" EXACT PLURAL [] xref: TAO:0000565 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000566 @@ -5961,7 +5962,7 @@ xref: TAO:0000566 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000411 ! posterior crista primordium relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000567 @@ -5982,7 +5983,7 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become blood. Determined by marker expression." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000568 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000569 @@ -5992,10 +5993,10 @@ def: "Embryonic structure that gives rise to the hindbrain." [GOC:mh, ORCiD:0000 synonym: "presumptive rhombencephalon" EXACT [] xref: TAO:0000569 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007015 ! posterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000570 @@ -6006,9 +6007,9 @@ def: "Portion of tissue that is part of the anterior neural keel and will form t synonym: "eye field" EXACT [] xref: TAO:0000570 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000571 @@ -6017,9 +6018,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the telencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000571 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000573 @@ -6030,7 +6031,7 @@ synonym: "stratum cellulare internum bulbi olfactorii" EXACT [] xref: TAO:0000573 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000574 @@ -6039,9 +6040,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the diencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000574 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000575 @@ -6060,7 +6061,7 @@ relationship: overlaps ZFA:0005613 ! basioccipital-prootic joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000576 @@ -6076,7 +6077,7 @@ relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000577 @@ -6145,7 +6146,7 @@ namespace: zebrafish_anatomy xref: TAO:0000582 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000583 @@ -6157,7 +6158,7 @@ xref: TAO:0000583 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000585 @@ -6166,7 +6167,7 @@ namespace: zebrafish_anatomy def: "Cranial cartilage which is a small median cartilage located between the premaxillae and anterodorsal to the ethmoid." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000585 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000586 @@ -6179,7 +6180,7 @@ synonym: "pu2" EXACT [] synonym: "third last vertebra" EXACT [] xref: TAO:0000586 is_a: ZFA:0000734 ! preural vertebra -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000587 @@ -6202,7 +6203,7 @@ namespace: zebrafish_anatomy def: "The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)" [GOC:mh, ORCiD:0000-0001-9114-8737] synonym: "auditory ganglion" EXACT [] synonym: "gVIII" EXACT [] -synonym: "octaval ganglion " EXACT [] +synonym: "octaval ganglion" EXACT [] synonym: "sag" EXACT [] synonym: "statoacoustic ganglia" EXACT PLURAL [] xref: TAO:0000588 @@ -6210,7 +6211,7 @@ is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000138 ! otic placode relationship: develops_from ZFA:0000762 ! facio-acoustic neural crest relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000589 @@ -6220,7 +6221,7 @@ def: "Anatomical groove which separates the dorsal and medial zones of dorsal te xref: TAO:0000589 is_a: ZFA:0001690 ! groove relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000590 @@ -6298,7 +6299,7 @@ synonym: "telencephalic tract/commissure" EXACT [] xref: TAO:0000597 is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000598 @@ -6316,7 +6317,7 @@ id: ZFA:0000599 name: torus semicircularis namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the midbrain and develops from the alar plate. The torus semicircularis is located dorsal to the lateral tegmentum where it extends into the medial tectal ventricle and receives ascending sensory octavolateralis input." [GOC:mh, ORCiD:0000-0001-9114-8737] -synonym: "semicircular torus " EXACT [] +synonym: "semicircular torus" EXACT [] xref: TAO:0000599 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region @@ -6405,7 +6406,7 @@ id: ZFA:0000608 name: ventral transverse namespace: zebrafish_anatomy synonym: "transverse ventralis" EXACT [] -synonym: "transversus ventralis " EXACT [] +synonym: "transversus ventralis" EXACT [] xref: TAO:0000608 is_a: ZFA:0000172 ! branchial muscle @@ -6457,7 +6458,7 @@ xref: TAO:0000614 is_a: ZFA:0005269 ! abductor muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000615 @@ -6478,7 +6479,7 @@ xref: TAO:0000616 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000617 @@ -6518,7 +6519,7 @@ xref: TAO:0000619 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000468 ! anterior crista primordium relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000620 @@ -6533,7 +6534,7 @@ relationship: overlaps ZFA:0005420 ! autopalatine-lateral ethmoid joint relationship: overlaps ZFA:0005421 ! autopalatine-maxillary joint relationship: overlaps ZFA:0005422 ! autopalatine-vomer joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000621 @@ -6547,7 +6548,7 @@ relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage relationship: overlaps ZFA:0005486 ! quadrate-metapterygoid joint relationship: overlaps ZFA:0005616 ! quadrate-entopterygoid joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000622 @@ -6560,7 +6561,7 @@ is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0005119 ! barbel primordium relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0000623 @@ -6614,7 +6615,7 @@ def: "Fin musculature that is part of the caudal fin. The musculature is compo xref: TAO:0000628 is_a: ZFA:0000207 ! fin musculature relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000629 @@ -6655,7 +6656,7 @@ namespace: zebrafish_anatomy def: "Anatomical system that has as its parts the organs concerned with reproduction." [UBERON:curator] xref: TAO:0000632 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000633 @@ -6699,7 +6700,7 @@ synonym: "crista cerebellaris molecular layer" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000636 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000291 ! medial octavolateralis nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000637 @@ -6709,7 +6710,7 @@ def: "Postcranial axial cartilage and Weberian ossicle that is located dorsal to xref: TAO:0000637 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: part_of ZFA:0000461 ! Weberian ossicle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000638 @@ -6741,7 +6742,7 @@ xref: TAO:0000640 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001688 ! corneal primordium relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000641 @@ -6857,7 +6858,7 @@ synonym: "radix dorsalis" EXACT [] xref: TAO:0000652 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005578 ! spinal nerve root -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000653 @@ -6945,7 +6946,7 @@ relationship: overlaps ZFA:0005423 ! basioccipital-exoccipital joint relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000662 @@ -6978,7 +6979,7 @@ synonym: "nervus facialis" EXACT [] xref: TAO:0000664 is_a: ZFA:0000641 ! cranial nerve relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000665 @@ -6999,7 +7000,7 @@ xref: TAO:0000666 is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0000667 ! gill filament relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000667 @@ -7010,7 +7011,7 @@ synonym: "gill filaments" EXACT PLURAL [] xref: TAO:0000667 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000668 @@ -7023,7 +7024,7 @@ synonym: "nervus glossopharyngeus" EXACT [] xref: TAO:0000668 is_a: ZFA:0000641 ! cranial nerve relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000669 @@ -7056,7 +7057,7 @@ def: "A connective tissue partition developing at the apex of the chevron-shaped synonym: "horizontal septum" EXACT [] xref: TAO:0000671 is_a: ZFA:0001089 ! myoseptum -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000672 @@ -7080,8 +7081,8 @@ synonym: "HA" EXACT [] xref: TAO:0000673 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000674 @@ -7127,7 +7128,7 @@ xref: TAO:0000678 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001098 ! immature hair cell anterior macula relationship: part_of ZFA:0000168 ! anterior macula -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000679 @@ -7199,7 +7200,7 @@ xref: TAO:0000685 is_a: ZFA:0005269 ! abductor muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000686 @@ -7232,7 +7233,7 @@ synonym: "support cells" RELATED PLURAL [] xref: TAO:0000688 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0000689 @@ -7294,7 +7295,7 @@ xref: TAO:0000694 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005138 ! dental organ relationship: part_of ZFA:0001239 ! ceratobranchial 5 bone -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000695 @@ -7305,7 +7306,7 @@ synonym: "labial cavities" EXACT PLURAL [] xref: TAO:0000695 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000696 @@ -7329,7 +7330,7 @@ synonym: "CN-V" EXACT [] synonym: "trigeminal nerve" EXACT [] xref: TAO:0000697 is_a: ZFA:0000641 ! cranial nerve -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000698 @@ -7341,7 +7342,7 @@ is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001169 ! vertebra 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000699 @@ -7373,7 +7374,7 @@ xref: TAO:0000701 is_a: ZFA:0005275 ! arrector muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000702 @@ -7411,7 +7412,7 @@ synonym: "ventral roots" EXACT PLURAL [] xref: TAO:0000705 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005578 ! spinal nerve root -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000706 @@ -7422,7 +7423,7 @@ xref: TAO:0000706 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005737 ! intestinal rod relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000707 @@ -7470,9 +7471,9 @@ synonym: "DEL cells" EXACT PLURAL [] xref: TAO:0000711 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001473 ! deep blastomere -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000712 @@ -7482,9 +7483,9 @@ def: "The portion of the YSL that lies deep to the blastoderm during epiboly." [ synonym: "I-YSL" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000712 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000013 ! Blastula:Oblong +relationship: start ZFS:0000013 ! blastula:oblong [Term] id: ZFA:0000713 @@ -7539,7 +7540,7 @@ namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000717 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold [Term] @@ -7550,7 +7551,7 @@ def: "The epaxial region of somite 27 derived body wall muscle. The epaxial regi xref: TAO:0000718 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000719 @@ -7561,9 +7562,9 @@ subset: cell_slim synonym: "slow muscle cells somite 21" EXACT PLURAL [] xref: TAO:0000719 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000720 @@ -7574,9 +7575,9 @@ subset: cell_slim synonym: "slow muscle cells somite 24" EXACT PLURAL [] xref: TAO:0000720 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000721 @@ -7587,9 +7588,9 @@ subset: cell_slim synonym: "slow muscle cells somite 27" EXACT PLURAL [] xref: TAO:0000721 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000722 @@ -7600,9 +7601,9 @@ subset: cell_slim synonym: "slow muscle cells somite 3" EXACT PLURAL [] xref: TAO:0000722 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000723 @@ -7613,9 +7614,9 @@ subset: cell_slim synonym: "slow muscle cells somite 5" EXACT PLURAL [] xref: TAO:0000723 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000724 @@ -7626,9 +7627,9 @@ subset: cell_slim synonym: "slow muscle cells somite 8" EXACT PLURAL [] xref: TAO:0000724 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000725 @@ -7637,7 +7638,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 11 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000725 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000726 @@ -7646,7 +7647,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 14 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000726 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000727 @@ -7655,7 +7656,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 17 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000727 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000728 @@ -7681,7 +7682,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 23 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000730 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000731 @@ -7690,7 +7691,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 27 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000731 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000732 @@ -7707,7 +7708,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 7 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000733 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000734 @@ -7719,7 +7720,7 @@ synonym: "specialized centra/vertebrae" EXACT PLURAL [] xref: TAO:0000734 is_a: ZFA:0000326 ! caudal vertebra relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000735 @@ -7763,7 +7764,7 @@ def: "The epaxial region of somite 11 derived body wall muscle. The epaxial regi xref: TAO:0000739 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000740 @@ -7782,7 +7783,7 @@ def: "The epaxial region of somite 14 derived body wall muscle. The epaxial regi xref: TAO:0000741 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000742 @@ -7792,7 +7793,7 @@ def: "The epaxial region of somite 17 derived body wall muscle. The epaxial regi xref: TAO:0000742 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000743 @@ -7811,7 +7812,7 @@ def: "The epaxial region of somite 22 derived body wall muscle. The epaxial regi xref: TAO:0000744 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000745 @@ -7821,7 +7822,7 @@ def: "The epaxial region of somite 25 derived body wall muscle. The epaxial regi xref: TAO:0000745 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000746 @@ -7831,7 +7832,7 @@ def: "The epaxial region of somite 28 derived body wall muscle. The epaxial regi xref: TAO:0000746 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000747 @@ -7841,7 +7842,7 @@ def: "The epaxial region of somite 30 derived body wall muscle. The epaxial regi xref: TAO:0000747 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000748 @@ -7851,7 +7852,7 @@ def: "The epaxial region of somite 6 derived body wall muscle. The epaxial regio xref: TAO:0000748 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000749 @@ -7861,7 +7862,7 @@ def: "The epaxial region of somite 9 derived body wall muscle. The epaxial regio xref: TAO:0000749 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000750 @@ -7873,9 +7874,9 @@ synonym: "fast muscle cells somite 10" EXACT PLURAL [] synonym: "fast muscle fiber somite 10" EXACT [] xref: TAO:0000750 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000751 @@ -7885,7 +7886,7 @@ def: "The epaxial region of somite 8 derived body wall muscle. The epaxial regio xref: TAO:0000751 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000752 @@ -7897,9 +7898,9 @@ synonym: "fast muscle cells somite 13" EXACT PLURAL [] synonym: "fast muscle fiber somite 13" EXACT [] xref: TAO:0000752 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000753 @@ -7911,9 +7912,9 @@ synonym: "fast muscle cells somite 16" EXACT PLURAL [] synonym: "fast muscle fiber somite 16" EXACT [] xref: TAO:0000753 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000754 @@ -7925,9 +7926,9 @@ synonym: "fast muscle cells somite 19" EXACT PLURAL [] synonym: "fast muscle fiber somite 19" EXACT [] xref: TAO:0000754 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000755 @@ -7939,9 +7940,9 @@ synonym: "fast muscle cells somite 21" EXACT PLURAL [] synonym: "fast muscle fiber somite 21" EXACT [] xref: TAO:0000755 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000756 @@ -7953,9 +7954,9 @@ synonym: "fast muscle cells somite 24" EXACT PLURAL [] synonym: "fast muscle fiber somite 24" EXACT [] xref: TAO:0000756 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000757 @@ -7967,9 +7968,9 @@ synonym: "fast muscle cells somite 27" EXACT PLURAL [] synonym: "fast muscle fiber somite 27" EXACT [] xref: TAO:0000757 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000758 @@ -7981,7 +7982,7 @@ synonym: "fast muscle cells somite 3" EXACT PLURAL [] synonym: "fast muscle fiber somite 3" EXACT [] xref: TAO:0000758 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 [Term] @@ -7994,7 +7995,7 @@ synonym: "fast muscle cells somite 5" EXACT PLURAL [] synonym: "fast muscle fiber somite 5" EXACT [] xref: TAO:0000759 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 [Term] @@ -8007,9 +8008,9 @@ synonym: "fast muscle cells somite 8" EXACT PLURAL [] synonym: "fast muscle fiber somite 8" EXACT [] xref: TAO:0000760 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000761 @@ -8020,9 +8021,9 @@ synonym: "floor plate midbrain" RELATED [] synonym: "floorplate midbrain" RELATED [] xref: TAO:0000761 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000762 @@ -8032,8 +8033,8 @@ def: "Cranial neural crest that gives rise to the facio-acoustic ganglion." [GOC synonym: "facio acoustic neural crest" EXACT [] xref: TAO:0000762 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000763 @@ -8044,10 +8045,10 @@ synonym: "floor plate r2" EXACT [] synonym: "floorplate r2" EXACT [] xref: TAO:0000763 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000764 @@ -8058,10 +8059,10 @@ synonym: "floor plate r5" EXACT [] synonym: "floorplate r5" EXACT [] xref: TAO:0000764 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000765 @@ -8072,10 +8073,10 @@ synonym: "floor plate r8" EXACT [] synonym: "floorplate r8" EXACT [] xref: TAO:0000765 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000766 @@ -8085,7 +8086,7 @@ def: "Portion of tissue which is part of the valvula cerebelli and consists larg xref: TAO:0000766 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000767 @@ -8095,7 +8096,7 @@ def: "The hypaxial region of somite 11 derived body wall muscle. The hypaxial re xref: TAO:0000767 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000768 @@ -8105,7 +8106,7 @@ def: "The hypaxial region of somite 14 derived body wall muscle. The hypaxial re xref: TAO:0000768 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000769 @@ -8115,7 +8116,7 @@ def: "The hypaxial region of somite 17 derived body wall muscle. The hypaxial re xref: TAO:0000769 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000770 @@ -8134,7 +8135,7 @@ def: "The hypaxial region of somite 22 derived body wall muscle. The hypaxial re xref: TAO:0000771 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000772 @@ -8144,7 +8145,7 @@ def: "The hypaxial region of somite 25 derived body wall muscle. The hypaxial re xref: TAO:0000772 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000773 @@ -8156,9 +8157,9 @@ synonym: "fast muscle cells somite 12" EXACT PLURAL [] synonym: "fast muscle fiber somite 12" EXACT [] xref: TAO:0000773 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000774 @@ -8169,7 +8170,7 @@ subset: cell_slim xref: TAO:0000774 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000775 @@ -8180,7 +8181,7 @@ subset: cell_slim xref: TAO:0000775 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000776 @@ -8190,7 +8191,7 @@ def: "The hypaxial region of somite 6 derived body wall muscle. The hypaxial reg xref: TAO:0000776 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000777 @@ -8200,7 +8201,7 @@ def: "The hypaxial region of somite 9 derived body wall muscle. The hypaxial reg xref: TAO:0000777 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000778 @@ -8232,9 +8233,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the diencephalic synonym: "lateral wall diencephalon" EXACT [] xref: TAO:0000780 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000781 @@ -8243,9 +8244,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 1." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000781 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000782 @@ -8254,9 +8255,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000782 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000783 @@ -8265,9 +8266,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000783 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000949 ! rhombomere 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000784 @@ -8279,9 +8280,9 @@ synonym: "fast muscle cells somite 15" EXACT PLURAL [] synonym: "fast muscle fiber somite 15" EXACT [] xref: TAO:0000784 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000785 @@ -8291,9 +8292,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the telencephalic synonym: "lateral wall telencephalon" EXACT [] xref: TAO:0000785 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000786 @@ -8301,9 +8302,9 @@ name: medial migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000786 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000787 @@ -8311,7 +8312,7 @@ name: mesenchyme derived from head neural crest namespace: zebrafish_anatomy xref: TAO:0000787 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000788 @@ -8320,9 +8321,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme part of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000788 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000789 @@ -8332,9 +8333,9 @@ def: "Mesoderm that is part of the pectoral fin bud." [GOC:mh, ORCiD:0000-0001-9 synonym: "mesoderm pectoral fin buds" EXACT PLURAL [] xref: TAO:0000789 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000790 @@ -8346,7 +8347,7 @@ synonym: "muscle pioneers somite 10" EXACT PLURAL [] xref: TAO:0000790 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000791 @@ -8358,7 +8359,7 @@ synonym: "muscle pioneers somite 13" EXACT PLURAL [] xref: TAO:0000791 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000792 @@ -8370,7 +8371,7 @@ synonym: "muscle pioneers somite 16" EXACT PLURAL [] xref: TAO:0000792 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000793 @@ -8382,7 +8383,7 @@ synonym: "muscle pioneers somite 19" EXACT PLURAL [] xref: TAO:0000793 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000794 @@ -8394,7 +8395,7 @@ synonym: "muscle pioneers somite 22" EXACT PLURAL [] xref: TAO:0000794 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000795 @@ -8406,9 +8407,9 @@ synonym: "fast muscle cells somite 18" EXACT PLURAL [] synonym: "fast muscle fiber somite 18" EXACT [] xref: TAO:0000795 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000796 @@ -8420,7 +8421,7 @@ synonym: "muscle pioneers somite 25" EXACT PLURAL [] xref: TAO:0000796 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000797 @@ -8432,7 +8433,7 @@ synonym: "muscle pioneers somite 28" EXACT PLURAL [] xref: TAO:0000797 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000798 @@ -8444,7 +8445,7 @@ synonym: "muscle pioneers somite 30" EXACT PLURAL [] xref: TAO:0000798 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000799 @@ -8456,7 +8457,7 @@ synonym: "muscle pioneers somite 6" EXACT PLURAL [] xref: TAO:0000799 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000800 @@ -8468,7 +8469,7 @@ synonym: "muscle pioneers somite 9" EXACT PLURAL [] xref: TAO:0000800 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000801 @@ -8478,9 +8479,9 @@ def: "Portion of somite 11 that gives rise to body wall muscle masses." [ZFIN:ZD subset: cell_slim xref: TAO:0000801 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000802 @@ -8490,9 +8491,9 @@ def: "Portion of somite 15 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000802 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000803 @@ -8502,9 +8503,9 @@ def: "Portion of somite 18 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000803 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000804 @@ -8514,9 +8515,9 @@ def: "Portion of somite 20 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000804 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000805 @@ -8526,9 +8527,9 @@ def: "Portion of somite 23 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000805 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000806 @@ -8540,21 +8541,21 @@ synonym: "fast muscle cells somite 20" EXACT PLURAL [] synonym: "fast muscle fiber somite 20" EXACT [] xref: TAO:0000806 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000807 name: myotome somite 26 namespace: zebrafish_anatomy -def: "Portion of somite 16 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] +def: "Portion of somite 26 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] subset: cell_slim xref: TAO:0000807 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000808 @@ -8564,9 +8565,9 @@ def: "Portion of somite 29 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000808 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000809 @@ -8576,9 +8577,9 @@ def: "Portion of somite 4 that gives rise to body wall muscle masses." [GOC:ymb, subset: cell_slim xref: TAO:0000809 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000810 @@ -8588,9 +8589,9 @@ def: "Portion of somite 7 that gives rise to body wall muscle masses." [GOC:ymb, subset: cell_slim xref: TAO:0000810 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000811 @@ -8600,8 +8601,8 @@ def: "Cranial neural crest that is part of the diencephalon." [GOC:ymb, ORCiD:00 synonym: "diencephalic neural crest" EXACT [] xref: TAO:0000811 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000812 @@ -8610,8 +8611,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that is part of the telencephalon." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0000812 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000813 @@ -8623,7 +8624,7 @@ synonym: "neuromasts infraorbital" EXACT PLURAL [] xref: TAO:0000813 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000524 ! infraorbital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000814 @@ -8635,7 +8636,7 @@ synonym: "neuromasts opercular" EXACT PLURAL [] xref: TAO:0000814 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000424 ! opercular lateral line -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000815 @@ -8653,7 +8654,7 @@ def: "The epithelium that lines the oral cavity. The oral epithelium epithelial xref: TAO:0000816 is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000817 @@ -8665,9 +8666,9 @@ synonym: "fast muscle cells somite 23" EXACT PLURAL [] synonym: "fast muscle fiber somite 23" EXACT [] xref: TAO:0000817 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000818 @@ -8677,7 +8678,7 @@ def: "Vagal neural crest is adjacent to the first seven somites gives rise to bo synonym: "post-otic neural crest" EXACT [] xref: TAO:0000818 is_a: ZFA:0000045 ! neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000819 @@ -8706,8 +8707,8 @@ subset: cell_slim synonym: "primary neurons hindbrain" EXACT PLURAL [] xref: TAO:0000821 is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000822 @@ -8736,10 +8737,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 2." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000824 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000825 @@ -8748,10 +8749,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000825 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000826 @@ -8774,9 +8775,9 @@ synonym: "fast muscle cells somite 26" EXACT PLURAL [] synonym: "fast muscle fiber somite 26" EXACT [] xref: TAO:0000827 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000828 @@ -8785,10 +8786,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000828 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000829 @@ -8798,7 +8799,7 @@ def: "Ventromedial region of somite 11 that will form vertebral cartilages and c xref: TAO:0000829 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000830 @@ -8808,7 +8809,7 @@ def: "Ventromedial region of somite 14 that will form vertebral cartilages and c xref: TAO:0000830 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000831 @@ -8818,7 +8819,7 @@ def: "Ventromedial region of somite 17 that will form vertebral cartilages and c xref: TAO:0000831 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000832 @@ -8828,7 +8829,7 @@ def: "Ventromedial region of somite 2 that will form vertebral cartilages and co xref: TAO:0000832 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000833 @@ -8838,7 +8839,7 @@ def: "Ventromedial region of somite 22 that will form vertebral cartilages and c xref: TAO:0000833 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000834 @@ -8848,7 +8849,7 @@ def: "Ventromedial region of somite 25 that will form vertebral cartilages and c xref: TAO:0000834 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000835 @@ -8858,7 +8859,7 @@ def: "Ventromedial region of somite 28 that will form vertebral cartilages and c xref: TAO:0000835 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000836 @@ -8868,7 +8869,7 @@ def: "Ventromedial region of somite 30 that will form vertebral cartilages and c xref: TAO:0000836 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000837 @@ -8878,7 +8879,7 @@ def: "Ventromedial region of somite 6 that will form vertebral cartilages and co xref: TAO:0000837 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000838 @@ -8890,9 +8891,9 @@ synonym: "fast muscle cells somite 29" EXACT PLURAL [] synonym: "fast muscle fiber somite 29" EXACT [] xref: TAO:0000838 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000839 @@ -8902,7 +8903,7 @@ def: "Ventromedial region of somite 9 that will form vertebral cartilages and co xref: TAO:0000839 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000840 @@ -8913,9 +8914,9 @@ subset: cell_slim synonym: "slow muscle cells somite 11" EXACT PLURAL [] xref: TAO:0000840 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000841 @@ -8926,9 +8927,9 @@ subset: cell_slim synonym: "slow muscle cells somite 14" EXACT PLURAL [] xref: TAO:0000841 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000842 @@ -8939,9 +8940,9 @@ subset: cell_slim synonym: "slow muscle cells somite 17" EXACT PLURAL [] xref: TAO:0000842 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000843 @@ -8952,9 +8953,9 @@ subset: cell_slim synonym: "slow muscle cells somite 2" EXACT PLURAL [] xref: TAO:0000843 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000844 @@ -8965,9 +8966,9 @@ subset: cell_slim synonym: "slow muscle cells somite 22" EXACT PLURAL [] xref: TAO:0000844 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000845 @@ -8978,9 +8979,9 @@ subset: cell_slim synonym: "slow muscle cells somite 25" EXACT PLURAL [] xref: TAO:0000845 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000846 @@ -8991,9 +8992,9 @@ subset: cell_slim synonym: "slow muscle cells somite 28" EXACT PLURAL [] xref: TAO:0000846 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000847 @@ -9004,9 +9005,9 @@ subset: cell_slim synonym: "slow muscle cells somite 30" EXACT PLURAL [] xref: TAO:0000847 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000848 @@ -9017,9 +9018,9 @@ subset: cell_slim synonym: "slow muscle cells somite 6" EXACT PLURAL [] xref: TAO:0000848 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000849 @@ -9031,7 +9032,7 @@ synonym: "fast muscle cells somite 4" EXACT PLURAL [] synonym: "fast muscle fiber somite 4" EXACT [] xref: TAO:0000849 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 [Term] @@ -9043,9 +9044,9 @@ subset: cell_slim synonym: "slow muscle cells somite 9" EXACT PLURAL [] xref: TAO:0000850 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000851 @@ -9054,7 +9055,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 12 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000851 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000852 @@ -9063,7 +9064,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 15 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000852 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000853 @@ -9072,7 +9073,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 18 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000853 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000854 @@ -9081,7 +9082,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail 21 segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000854 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000855 @@ -9090,7 +9091,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 24 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000855 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000856 @@ -9099,7 +9100,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 28 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000856 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000857 @@ -9116,7 +9117,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 8 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000858 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000859 @@ -9130,7 +9131,7 @@ synonym: "specialized hemal arches and spines" EXACT PLURAL [] xref: TAO:0000859 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000860 @@ -9142,9 +9143,9 @@ synonym: "fast muscle cells somite 7" EXACT PLURAL [] synonym: "fast muscle fiber somite 7" EXACT [] xref: TAO:0000860 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000861 @@ -9176,7 +9177,7 @@ synonym: "dermal bone cranium" EXACT [] xref: TAO:0000863 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000864 @@ -9195,7 +9196,7 @@ def: "The epaxial region of somite 12 derived body wall muscle. The epaxial regi xref: TAO:0000865 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000866 @@ -9205,7 +9206,7 @@ def: "The epaxial region of somite 15 derived body wall muscle. The epaxial regi xref: TAO:0000866 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000867 @@ -9215,7 +9216,7 @@ def: "The epaxial region of somite 18 derived body wall muscle. The epaxial regi xref: TAO:0000867 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000868 @@ -9225,7 +9226,7 @@ def: "The epaxial region of somite 20 derived body wall muscle. The epaxial regi xref: TAO:0000868 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000869 @@ -9235,7 +9236,7 @@ def: "The epaxial region of somite 23 derived body wall muscle. The epaxial regi xref: TAO:0000869 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000870 @@ -9245,7 +9246,7 @@ def: "The epaxial region of somite 26 derived body wall muscle. The epaxial regi xref: TAO:0000870 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000871 @@ -9255,10 +9256,10 @@ def: "Floor plate that is part of the diencephalon." [GOC:mh, ORCiD:0000-0001-91 synonym: "floorplate diencephalon" EXACT [] xref: TAO:0000871 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000872 @@ -9268,7 +9269,7 @@ def: "The epaxial region of somite 29 derived body wall muscle. The epaxial regi xref: TAO:0000872 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000873 @@ -9287,7 +9288,7 @@ def: "The epaxial region of somite 7 derived body wall muscle. The epaxial regio xref: TAO:0000874 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000875 @@ -9308,9 +9309,9 @@ synonym: "fast muscle cells somite 11" EXACT PLURAL [] synonym: "fast muscle fiber somite 11" EXACT [] xref: TAO:0000876 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000877 @@ -9322,9 +9323,9 @@ synonym: "fast muscle cells somite 14" EXACT PLURAL [] synonym: "fast muscle fiber somite 14" EXACT [] xref: TAO:0000877 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000878 @@ -9336,9 +9337,9 @@ synonym: "fast muscle cells somite 17" EXACT PLURAL [] synonym: "fast muscle fiber somite 17" EXACT [] xref: TAO:0000878 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000879 @@ -9350,7 +9351,7 @@ synonym: "fast muscle cells somite 2" EXACT PLURAL [] synonym: "fast muscle fiber somite 2" EXACT [] xref: TAO:0000879 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 [Term] @@ -9363,9 +9364,9 @@ synonym: "fast muscle cells somite 22" EXACT PLURAL [] synonym: "fast muscle fiber somite 22" EXACT [] xref: TAO:0000880 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000881 @@ -9377,9 +9378,9 @@ synonym: "fast muscle cells somite 25" EXACT PLURAL [] synonym: "fast muscle fiber somite 25" EXACT [] xref: TAO:0000881 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000882 @@ -9389,10 +9390,10 @@ def: "Floor plate that is part of the rhombomere 1." [GOC:mh, ORCiD:0000-0001-91 synonym: "floor plate r1" EXACT [] xref: TAO:0000882 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000883 @@ -9404,9 +9405,9 @@ synonym: "fast muscle cells somite 28" EXACT PLURAL [] synonym: "fast muscle fiber somite 28" EXACT [] xref: TAO:0000883 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000884 @@ -9418,9 +9419,9 @@ synonym: "fast muscle cells somite 30" EXACT PLURAL [] synonym: "fast muscle fiber somite 30" EXACT [] xref: TAO:0000884 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000885 @@ -9432,9 +9433,9 @@ synonym: "fast muscle cells somite 6" EXACT PLURAL [] synonym: "fast muscle fiber somite 6" EXACT [] xref: TAO:0000885 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000886 @@ -9446,9 +9447,9 @@ synonym: "fast muscle cells somite 9" EXACT PLURAL [] synonym: "fast muscle fiber somite 9" EXACT [] xref: TAO:0000886 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000887 @@ -9458,10 +9459,10 @@ def: "Floor plate that is part of the neural rod." [GOC:mh, GOC:ymb, ORCiD:0000- synonym: "floorplate neural rod" EXACT [] xref: TAO:0000887 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000888 @@ -9472,10 +9473,10 @@ synonym: "floor plate r3" EXACT [] synonym: "floorplate r3" EXACT [] xref: TAO:0000888 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000889 @@ -9486,10 +9487,10 @@ synonym: "floor plate r6" EXACT [] synonym: "floorplate r6" EXACT [] xref: TAO:0000889 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000890 @@ -9500,10 +9501,10 @@ synonym: "floorplate spinal cord" EXACT [] xref: TAO:0000890 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001434 ! floor plate neural tube -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000891 @@ -9522,7 +9523,7 @@ def: "The hypaxial region of somite 12 derived body wall muscle. The hypaxial re xref: TAO:0000892 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000893 @@ -9533,10 +9534,10 @@ synonym: "floor plate r4" EXACT [] synonym: "floorplate r4" EXACT [] xref: TAO:0000893 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000894 @@ -9546,7 +9547,7 @@ def: "The hypaxial region of somite 15 derived body wall muscle. The hypaxial re xref: TAO:0000894 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000895 @@ -9556,7 +9557,7 @@ def: "The hypaxial region of somite 18 derived body wall muscle. The hypaxial re xref: TAO:0000895 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000896 @@ -9566,7 +9567,7 @@ def: "The hypaxial region of somite 20 derived body wall muscle. The hypaxial re xref: TAO:0000896 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000897 @@ -9576,7 +9577,7 @@ def: "The hypaxial region of somite 23 derived body wall muscle. The hypaxial re xref: TAO:0000897 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000898 @@ -9586,7 +9587,7 @@ def: "The hypaxial region of somite 26 derived body wall muscle. The hypaxial re xref: TAO:0000898 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000899 @@ -9596,7 +9597,7 @@ def: "The hypaxial region of somite 29 derived body wall muscle. The hypaxial re xref: TAO:0000899 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000900 @@ -9615,7 +9616,7 @@ def: "The hypaxial region of somite 7 derived body wall muscle. The hypaxial reg xref: TAO:0000901 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000902 @@ -9644,10 +9645,10 @@ synonym: "floor plate r7" EXACT [] synonym: "floorplate r7" EXACT [] xref: TAO:0000904 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000905 @@ -9655,7 +9656,7 @@ name: lateral mesenchyme derived from mesoderm namespace: zebrafish_anatomy xref: TAO:0000905 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000906 @@ -9665,9 +9666,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the midbrain regi synonym: "lateral wall midbrain" EXACT [] xref: TAO:0000906 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000907 @@ -9676,9 +9677,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 2." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000907 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000908 @@ -9687,9 +9688,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000908 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000909 @@ -9698,9 +9699,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000909 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000153 ! rhombomere 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000910 @@ -9725,9 +9726,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme part of median fin fold." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000912 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000913 @@ -9737,7 +9738,7 @@ def: "Portion of tissue which is part of the valvula cerebelli and contains neur xref: TAO:0000913 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000914 @@ -9747,10 +9748,10 @@ def: "Floor plate that is part of the telencephalon." [GOC:mh, ORCiD:0000-0001-9 synonym: "floorplate telencephalon" EXACT [] xref: TAO:0000914 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000915 @@ -9762,7 +9763,7 @@ synonym: "muscle pioneers somite 11" EXACT PLURAL [] xref: TAO:0000915 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000916 @@ -9774,7 +9775,7 @@ synonym: "muscle pioneers somite 14" EXACT PLURAL [] xref: TAO:0000916 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000917 @@ -9786,7 +9787,7 @@ synonym: "muscle pioneers somite 17" EXACT PLURAL [] xref: TAO:0000917 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000918 @@ -9798,7 +9799,7 @@ synonym: "muscle pioneers somite 20" EXACT PLURAL [] xref: TAO:0000918 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000919 @@ -9810,7 +9811,7 @@ synonym: "muscle pioneers somite 23" EXACT PLURAL [] xref: TAO:0000919 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000920 @@ -9822,7 +9823,7 @@ synonym: "muscle pioneers somite 26" EXACT PLURAL [] xref: TAO:0000920 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000921 @@ -9834,7 +9835,7 @@ synonym: "muscle pioneers somite 29" EXACT PLURAL [] xref: TAO:0000921 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000922 @@ -9857,7 +9858,7 @@ synonym: "muscle pioneers somite 7" EXACT PLURAL [] xref: TAO:0000923 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000924 @@ -9866,7 +9867,7 @@ namespace: zebrafish_anatomy def: "Portion of somite 1 that gives rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000924 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000072 ! somite 1 [Term] @@ -9877,7 +9878,7 @@ def: "The hypaxial region of somite 10 derived body wall muscle. The hypaxial re xref: TAO:0000925 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000926 @@ -9886,9 +9887,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 12 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000926 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000927 @@ -9897,9 +9898,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 16 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000927 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000928 @@ -9908,9 +9909,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 19 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000928 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000929 @@ -9919,9 +9920,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 21 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000929 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000930 @@ -9930,9 +9931,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 24 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000930 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000931 @@ -9941,9 +9942,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 27 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000931 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000932 @@ -9952,9 +9953,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 3 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000932 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000933 @@ -9963,9 +9964,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 5 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000933 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000934 @@ -9974,9 +9975,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 8 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000934 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000935 @@ -9986,8 +9987,8 @@ def: "Neural crest that is part of the midbrain." [GOC:ymb, ORCiD:0000-0002-9900 synonym: "mesencephalic neural crest" EXACT [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0000935 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000936 @@ -9998,7 +9999,7 @@ synonym: "dorsal fin distal radials" EXACT PLURAL [] xref: TAO:0000936 is_a: ZFA:0001647 ! dorsal fin radial relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000937 @@ -10008,7 +10009,7 @@ def: "The hypaxial region of somite 13 derived body wall muscle. The hypaxial re xref: TAO:0000937 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000938 @@ -10021,7 +10022,7 @@ xref: TAO:0000938 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000939 @@ -10033,7 +10034,7 @@ synonym: "neuromasts middle" EXACT PLURAL [] xref: TAO:0000939 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000344 ! middle lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000940 @@ -10046,7 +10047,7 @@ xref: TAO:0000940 is_a: ZFA:0000243 ! neuromast relationship: develops_from ZFA:0001157 ! posterior lateral line primordium relationship: part_of ZFA:0000944 ! posterior lateral line -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000941 @@ -10066,19 +10067,21 @@ def: "Skeleton that consists of the supporting endochondral proximal and distal xref: TAO:0000943 is_a: ZFA:0000027 ! paired fin skeleton relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000944 name: posterior lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880] +def: "One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-110811-14] +synonym: "midbody lateral line" RELATED [] +synonym: "midtrunk line" RELATED [] synonym: "pll" EXACT [] xref: TAO:0000944 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0001157 ! posterior lateral line primordium relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000946 @@ -10088,7 +10091,7 @@ def: "The hypaxial region of somite 16 derived body wall muscle. The hypaxial re xref: TAO:0000946 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000947 @@ -10099,7 +10102,7 @@ synonym: "dorsal fin proximal radials" EXACT PLURAL [] xref: TAO:0000947 is_a: ZFA:0001647 ! dorsal fin radial relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000948 @@ -10128,10 +10131,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 3." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000950 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000951 @@ -10140,10 +10143,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000951 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000952 @@ -10162,7 +10165,7 @@ def: "Ventromedial region of somite 12 that will form vertebral cartilages and c xref: TAO:0000953 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000954 @@ -10172,7 +10175,7 @@ def: "Ventromedial region of somite 15 that will form vertebral cartilages and c xref: TAO:0000954 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000955 @@ -10182,7 +10185,7 @@ def: "Ventromedial region of somite 18 that will form vertebral cartilages and c xref: TAO:0000955 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000956 @@ -10192,7 +10195,7 @@ def: "Ventromedial region of somite 20 that will form vertebral cartilages and c xref: TAO:0000956 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000957 @@ -10202,7 +10205,7 @@ def: "The hypaxial region of somite 19 derived body wall muscle. The hypaxial re xref: TAO:0000957 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000958 @@ -10212,7 +10215,7 @@ def: "Ventromedial region of somite 23 that will form vertebral cartilages and c xref: TAO:0000958 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000959 @@ -10222,7 +10225,7 @@ def: "Ventromedial region of somite 26 that will form vertebral cartilages and c xref: TAO:0000959 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000960 @@ -10232,7 +10235,7 @@ def: "Ventromedial region of somite 29 that will form vertebral cartilages and c xref: TAO:0000960 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000961 @@ -10242,7 +10245,7 @@ def: "Ventromedial region of somite 4 that will form vertebral cartilages and co xref: TAO:0000961 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000962 @@ -10252,7 +10255,7 @@ def: "Ventromedial region of somite 7 that will form vertebral cartilages and co xref: TAO:0000962 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000963 @@ -10263,9 +10266,9 @@ subset: cell_slim synonym: "slow muscle cells somite 1" EXACT PLURAL [] xref: TAO:0000963 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000964 @@ -10276,9 +10279,9 @@ subset: cell_slim synonym: "slow muscle cells somite 12" EXACT PLURAL [] xref: TAO:0000964 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000965 @@ -10289,9 +10292,9 @@ subset: cell_slim synonym: "slow muscle cells somite 15" EXACT PLURAL [] xref: TAO:0000965 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000966 @@ -10302,9 +10305,9 @@ subset: cell_slim synonym: "slow muscle cells somite 18" EXACT PLURAL [] xref: TAO:0000966 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000967 @@ -10315,9 +10318,9 @@ subset: cell_slim synonym: "slow muscle cells somite 20" EXACT PLURAL [] xref: TAO:0000967 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000968 @@ -10327,7 +10330,7 @@ def: "The hypaxial region of somite 21 derived body wall muscle. The hypaxial re xref: TAO:0000968 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000969 @@ -10338,9 +10341,9 @@ subset: cell_slim synonym: "slow muscle cells somite 23" EXACT PLURAL [] xref: TAO:0000969 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000970 @@ -10351,9 +10354,9 @@ subset: cell_slim synonym: "slow muscle cells somite 26" EXACT PLURAL [] xref: TAO:0000970 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000971 @@ -10364,9 +10367,9 @@ subset: cell_slim synonym: "slow muscle cells somite 29" EXACT PLURAL [] xref: TAO:0000971 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000972 @@ -10377,9 +10380,9 @@ subset: cell_slim synonym: "slow muscle cells somite 4" EXACT PLURAL [] xref: TAO:0000972 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000973 @@ -10390,9 +10393,9 @@ subset: cell_slim synonym: "slow muscle cells somite 7" EXACT PLURAL [] xref: TAO:0000973 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000974 @@ -10401,7 +10404,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 10 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000974 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000975 @@ -10410,7 +10413,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 13 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000975 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000976 @@ -10419,7 +10422,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 16 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000976 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000977 @@ -10428,7 +10431,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 19 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000977 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000978 @@ -10437,7 +10440,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 22 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000978 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000979 @@ -10447,7 +10450,7 @@ def: "The hypaxial region of somite 24 derived body wall muscle. The hypaxial re xref: TAO:0000979 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000980 @@ -10456,7 +10459,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 25 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000980 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000981 @@ -10465,7 +10468,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 29 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000981 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000982 @@ -10474,7 +10477,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 6 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000982 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000983 @@ -10483,7 +10486,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 9 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000983 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000984 @@ -10509,7 +10512,7 @@ def: "The hypaxial region of somite 27 derived body wall muscle. The hypaxial re xref: TAO:0000986 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000987 @@ -10537,7 +10540,7 @@ def: "The hypaxial region of somite 8 derived body wall muscle. The hypaxial reg xref: TAO:0000989 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000990 @@ -10545,7 +10548,7 @@ name: intermediate mesenchyme namespace: zebrafish_anatomy xref: TAO:0000990 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000991 @@ -10555,7 +10558,7 @@ def: "The epaxial region of somite 10 derived body wall muscle. The epaxial regi xref: TAO:0000991 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000992 @@ -10563,9 +10566,9 @@ name: lateral migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000992 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000993 @@ -10574,9 +10577,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue located at either side of the neural rod." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000993 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000994 @@ -10585,9 +10588,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 3." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000994 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000995 @@ -10596,9 +10599,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000995 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000996 @@ -10607,9 +10610,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the spinal cord." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000996 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000997 @@ -10626,8 +10629,8 @@ name: mesenchyme derived from head mesoderm namespace: zebrafish_anatomy xref: TAO:0000998 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000999 @@ -10635,7 +10638,7 @@ name: mesenchyme derived from trunk neural crest namespace: zebrafish_anatomy xref: TAO:0000999 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001000 @@ -10646,9 +10649,9 @@ synonym: "mesenchyme pectoral fins" EXACT PLURAL [] xref: TAO:0001000 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0000789 ! mesoderm pectoral fin bud -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001001 @@ -10658,7 +10661,7 @@ def: "The epaxial region of somite 13 derived body wall muscle. The epaxial regi xref: TAO:0001001 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001002 @@ -10678,7 +10681,7 @@ synonym: "muscle pioneers somite 12" EXACT PLURAL [] xref: TAO:0001003 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001004 @@ -10690,7 +10693,7 @@ synonym: "muscle pioneers somite 15" EXACT PLURAL [] xref: TAO:0001004 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001005 @@ -10702,7 +10705,7 @@ synonym: "muscle pioneers somite 18" EXACT PLURAL [] xref: TAO:0001005 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001006 @@ -10714,7 +10717,7 @@ synonym: "muscle pioneers somite 21" EXACT PLURAL [] xref: TAO:0001006 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001007 @@ -10726,7 +10729,7 @@ synonym: "muscle pioneers somite 24" EXACT PLURAL [] xref: TAO:0001007 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001008 @@ -10738,7 +10741,7 @@ synonym: "muscle pioneers somite 27" EXACT PLURAL [] xref: TAO:0001008 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001009 @@ -10772,7 +10775,7 @@ synonym: "muscle pioneers somite 8" EXACT PLURAL [] xref: TAO:0001011 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001012 @@ -10782,7 +10785,7 @@ def: "The epaxial region of somite 16 derived body wall muscle. The epaxial regi xref: TAO:0001012 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001013 @@ -10791,9 +10794,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 10 that gives rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001013 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001014 @@ -10802,9 +10805,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 13 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001014 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001015 @@ -10813,9 +10816,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 17 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001015 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001016 @@ -10824,9 +10827,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 2 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001016 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001017 @@ -10835,9 +10838,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 22 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001017 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001018 @@ -10846,9 +10849,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 25 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001018 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001019 @@ -10857,9 +10860,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 28 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001019 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001020 @@ -10868,9 +10871,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 30 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001020 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001021 @@ -10879,9 +10882,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 6 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001021 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001022 @@ -10890,9 +10893,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 9 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001022 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001023 @@ -10902,7 +10905,7 @@ def: "The epaxial region of somite 19 derived body wall muscle. The epaxial regi xref: TAO:0001023 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001024 @@ -10911,7 +10914,7 @@ namespace: zebrafish_anatomy def: "Neural crest that is part of the trunk." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001024 is_a: ZFA:0000045 ! neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001025 @@ -10923,7 +10926,7 @@ synonym: "neuromasts occipital" EXACT PLURAL [] xref: TAO:0001025 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000400 ! occipital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001026 @@ -10935,7 +10938,7 @@ synonym: "neuromasts supraorbital" EXACT PLURAL [] xref: TAO:0001026 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000443 ! supraorbital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001027 @@ -10947,7 +10950,7 @@ synonym: "buccal chamber" EXACT [] xref: TAO:0001027 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001028 @@ -10960,7 +10963,7 @@ synonym: "parhypurapophysis process" EXACT [] xref: TAO:0001028 is_a: ZFA:0000859 ! specialized hemal arch and spine relationship: part_of ZFA:0000438 ! parhypural -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001029 @@ -10972,7 +10975,7 @@ synonym: "inner limiting membranes" EXACT PLURAL [] xref: TAO:0001029 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001030 @@ -10982,7 +10985,7 @@ def: "The epaxial region of somite 21 derived body wall muscle. The epaxial regi xref: TAO:0001030 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001031 @@ -11011,10 +11014,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 1." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001033 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001034 @@ -11023,10 +11026,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001034 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001035 @@ -11035,10 +11038,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001035 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001036 @@ -11048,7 +11051,7 @@ def: "Ventromedial region of somite 10 that will form vertebral cartilages and c xref: TAO:0001036 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001037 @@ -11058,7 +11061,7 @@ def: "Ventromedial region of somite 13 that will form vertebral cartilages and c xref: TAO:0001037 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001038 @@ -11068,7 +11071,7 @@ def: "Ventromedial region of somite 16 that will form vertebral cartilages and c xref: TAO:0001038 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001039 @@ -11078,7 +11081,7 @@ def: "Ventromedial region of somite 19 that will form vertebral cartilages and c xref: TAO:0001039 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001040 @@ -11088,7 +11091,7 @@ def: "The epaxial region of somite 24 derived body wall muscle. The epaxial regi xref: TAO:0001040 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001041 @@ -11098,7 +11101,7 @@ def: "Ventromedial region of somite 21 that will form vertebral cartilages and c xref: TAO:0001041 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001042 @@ -11108,7 +11111,7 @@ def: "Ventromedial region of somite 24 that will form vertebral cartilages and c xref: TAO:0001042 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001043 @@ -11118,7 +11121,7 @@ def: "Ventromedial region of somite 27 that will form vertebral cartilages and c xref: TAO:0001043 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001044 @@ -11128,7 +11131,7 @@ def: "Ventromedial region of somite 3 that will form vertebral cartilages and co xref: TAO:0001044 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001045 @@ -11138,7 +11141,7 @@ def: "Ventromedial region of somite 5 that will form vertebral cartilages and co xref: TAO:0001045 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001046 @@ -11148,7 +11151,7 @@ def: "Ventromedial region of somite 8 that will form vertebral cartilages and co xref: TAO:0001046 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001047 @@ -11159,9 +11162,9 @@ subset: cell_slim synonym: "slow muscle cells somite 10" EXACT PLURAL [] xref: TAO:0001047 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001048 @@ -11172,9 +11175,9 @@ subset: cell_slim synonym: "slow muscle cells somite 13" EXACT PLURAL [] xref: TAO:0001048 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001049 @@ -11185,9 +11188,9 @@ subset: cell_slim synonym: "slow muscle cells somite 16" EXACT PLURAL [] xref: TAO:0001049 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001050 @@ -11198,9 +11201,9 @@ subset: cell_slim synonym: "slow muscle cells somite 19" EXACT PLURAL [] xref: TAO:0001050 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001051 @@ -11212,9 +11215,9 @@ synonym: "posterior cerebral carotid artery" EXACT [] synonym: "posterior rami of the cerebral carotid artery" EXACT [] xref: TAO:0001051 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005081 ! internal carotid artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001052 @@ -11225,9 +11228,9 @@ synonym: "medial head vein" EXACT [] synonym: "PHBC" EXACT [] xref: TAO:0001052 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001053 @@ -11237,8 +11240,8 @@ def: "Artery that originates as rostral extensions of the paired lateral dorsal synonym: "PICA" EXACT [] xref: TAO:0001053 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001054 @@ -11248,8 +11251,8 @@ def: "Connect the outflow of the aortic arches to the dorsal aorta. The place wh synonym: "LDA" EXACT [] xref: TAO:0001054 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001055 @@ -11260,10 +11263,10 @@ synonym: "pronephric duct openings" EXACT PLURAL [] synonym: "urogenital opening" RELATED [ZFIN:ZDB-PUB-060508-11] xref: TAO:0001055 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct relationship: part_of ZFA:0000330 ! cloacal chamber -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001056 @@ -11275,7 +11278,7 @@ xref: TAO:0001056 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000155 ! somite relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001057 @@ -11286,7 +11289,7 @@ synonym: "ISV" EXACT [] xref: TAO:0001057 is_a: ZFA:0000082 ! vein is_a: ZFA:0001285 ! intersegmental vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001058 @@ -11299,7 +11302,7 @@ xref: TAO:0001058 is_a: ZFA:0005597 ! median fin relationship: develops_from ZFA:0001069 ! ventral fin fold relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001059 @@ -11312,9 +11315,9 @@ synonym: "CrDI" EXACT [] synonym: "rostral division of the internal carotid artery" EXACT [] xref: TAO:0001059 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005081 ! internal carotid artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001060 @@ -11324,7 +11327,7 @@ def: "Basidorsals are bilaterally paired cartilages on the dorsolateral side of synonym: "arcualia" RELATED [] xref: TAO:0001060 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001061 @@ -11335,7 +11338,7 @@ synonym: "intersegmental arteries" EXACT PLURAL [] xref: TAO:0001061 is_a: ZFA:0000005 ! artery is_a: ZFA:0001285 ! intersegmental vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001062 @@ -11345,8 +11348,8 @@ def: "Artery that branches dorsally from the cranial division of the internal ca synonym: "PMsA" EXACT [] xref: TAO:0001062 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001063 @@ -11354,9 +11357,9 @@ name: posterior caudal vein namespace: zebrafish_anatomy xref: TAO:0001063 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001064 @@ -11368,7 +11371,7 @@ synonym: "neuromere" RELATED [] synonym: "rhombomeres" EXACT PLURAL [] xref: TAO:0001064 is_a: ZFA:0001328 ! neuromere -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000029 ! hindbrain [Term] @@ -11377,8 +11380,8 @@ name: lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001065 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001066 @@ -11390,7 +11393,7 @@ xref: TAO:0001066 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001060 ! basidorsal relationship: part_of ZFA:0001189 ! vertebra -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001067 @@ -11401,9 +11404,9 @@ synonym: "ACeV" EXACT [] synonym: "rostral cerebral vein" EXACT [] xref: TAO:0001067 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001068 @@ -11414,8 +11417,8 @@ synonym: "MsA" EXACT [] xref: TAO:0001068 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001062 ! primitive mesencephalic artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001069 @@ -11427,9 +11430,9 @@ synonym: "tail fin fold" EXACT [] synonym: "ventral fin" EXACT [] xref: TAO:0001069 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001070 @@ -11439,9 +11442,9 @@ def: "Presumptive structure part of the intermediate mesoderm, that is fated to synonym: "nephron primordium" EXACT [] xref: TAO:0001070 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001206 ! intermediate mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001071 @@ -11452,9 +11455,9 @@ synonym: "inner layer optic cup" EXACT [] synonym: "presumptive retinas" EXACT PLURAL [] xref: TAO:0001071 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001072 @@ -11466,7 +11469,7 @@ xref: TAO:0001072 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001081 ! thyroid primordium relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001073 @@ -11475,7 +11478,7 @@ namespace: zebrafish_anatomy def: "Vasculature that runs along the rostral-caudal axis of the fish." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001073 is_a: ZFA:0005249 ! vasculature -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001074 @@ -11487,7 +11490,7 @@ synonym: "taste buds" EXACT PLURAL [] xref: TAO:0001074 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001075 @@ -11498,7 +11501,7 @@ synonym: "choroidal fissures" EXACT PLURAL [] xref: TAO:0001075 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001076 @@ -11512,7 +11515,7 @@ xref: TAO:0001076 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005738 ! intestinal bulb primordium relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001077 @@ -11524,9 +11527,9 @@ xref: TAO:0001077 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000818 ! vagal neural crest relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001078 @@ -11537,7 +11540,7 @@ xref: TAO:0001078 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001077 ! thymus primordium relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001079 @@ -11548,7 +11551,7 @@ synonym: "blood vessel" RELATED [] xref: TAO:0001079 is_a: ZFA:0001490 ! cavitated compound organ is_a: ZFA:0005249 ! vasculature -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001080 @@ -11559,8 +11562,8 @@ synonym: "sclerotomes" EXACT PLURAL [] xref: TAO:0001080 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001081 @@ -11571,9 +11574,9 @@ synonym: "thyroid primordia" EXACT PLURAL [] xref: TAO:0001081 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001082 @@ -11582,9 +11585,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is posterior to the developing notochord during tail bud extension." [ZFIN:ZDB-PUB-970723-15] xref: TAO:0001082 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000077 ! tail bud -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001083 @@ -11595,7 +11598,7 @@ synonym: "ventricular zones" EXACT PLURAL [] xref: TAO:0001083 is_a: ZFA:0000098 ! proliferative region relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001084 @@ -11604,9 +11607,9 @@ namespace: zebrafish_anatomy synonym: "epaxial myotome regions" EXACT PLURAL [] xref: TAO:0001084 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001085 @@ -11615,9 +11618,9 @@ namespace: zebrafish_anatomy synonym: "hypaxial muscle" EXACT [] xref: TAO:0001085 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001086 @@ -11630,9 +11633,9 @@ synonym: "non migratory adaxial cells" EXACT [] xref: TAO:0001086 is_a: ZFA:0009114 ! muscle cell relationship: develops_from ZFA:0000003 ! adaxial cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001089 @@ -11643,7 +11646,7 @@ synonym: "myosepta" EXACT PLURAL [] xref: TAO:0001089 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001093 @@ -11652,8 +11655,8 @@ namespace: zebrafish_anatomy def: "Annotation with this anatomy term indicates that a structure was not specified by the author." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001093 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001094 @@ -11675,9 +11678,9 @@ synonym: "immature sensory patch" EXACT [] synonym: "immature sensory patches" EXACT PLURAL [] xref: TAO:0001095 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000051 ! otic vesicle -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001096 @@ -11687,9 +11690,9 @@ def: "Is an otic sensory epithelium that will develop into the mature anterior m synonym: "immature anterior maculae" EXACT PLURAL [] xref: TAO:0001096 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001095 ! immature macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001097 @@ -11699,9 +11702,9 @@ def: "Is an otic sensory epithelium that will develop into the mature posterior synonym: "immature posterior maculae" EXACT PLURAL [] xref: TAO:0001097 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001095 ! immature macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001098 @@ -11712,9 +11715,9 @@ subset: cell_slim synonym: "immature sensory hair cells anterior macula" EXACT PLURAL [] xref: TAO:0001098 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001096 ! immature anterior macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001099 @@ -11725,9 +11728,9 @@ subset: cell_slim synonym: "immature sensory hair cells posterior macula" EXACT PLURAL [] xref: TAO:0001099 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001097 ! immature posterior macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001100 @@ -11737,7 +11740,7 @@ def: "A duct that carries bile from the liver to the intestine." [GOC:cvs, ORCiD xref: TAO:0001100 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001101 @@ -11746,7 +11749,7 @@ namespace: zebrafish_anatomy def: "Sensory system that uses taste buds to sense chemical compounds." [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0001101 is_a: ZFA:0000282 ! sensory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001104 @@ -11755,9 +11758,9 @@ namespace: zebrafish_anatomy xref: TAO:0001104 is_a: ZFA:0000017 ! endoderm disjoint_from: ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001105 @@ -11767,7 +11770,7 @@ def: "Anatomical structure that is part of the embryo and is comprised of portio synonym: "embryonic structures" EXACT PLURAL [] xref: TAO:0001105 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001094 ! whole organism [Term] @@ -11779,10 +11782,10 @@ synonym: "pharyngeal pouches" EXACT PLURAL [] xref: TAO:0001106 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001306 ! pharyngeal arch -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001107 @@ -11793,9 +11796,9 @@ synonym: "internal gill buds" EXACT PLURAL [] xref: TAO:0001107 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001108 @@ -11821,7 +11824,7 @@ xref: CL:0000023 xref: TAO:0001109 is_a: ZFA:0009016 ! germ line cell relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001110 @@ -11832,7 +11835,7 @@ synonym: "egg follicle" EXACT [] xref: TAO:0001110 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000403 ! ovary -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001111 @@ -11843,7 +11846,7 @@ synonym: "vitelline envelope" EXACT [] xref: TAO:0001111 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001112 @@ -11854,7 +11857,7 @@ synonym: "granulosa cell layers" EXACT PLURAL [] xref: TAO:0001112 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001113 @@ -11873,7 +11876,7 @@ namespace: zebrafish_anatomy def: "Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001114 is_a: ZFA:0001308 ! organism subdivision -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001115 @@ -11883,7 +11886,7 @@ def: "Organism subdivision which is the part of the body posterior to the head a xref: TAO:0001115 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001116 @@ -11893,8 +11896,8 @@ def: "Portion of embryonic tissue determined by fate mapping to become a structu synonym: "presumptive structures" EXACT PLURAL [] xref: TAO:0001116 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0001117 @@ -11905,7 +11908,7 @@ synonym: "tail" RELATED [] xref: TAO:0001117 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001118 @@ -11920,7 +11923,7 @@ synonym: "urogenital papillae" EXACT PLURAL [] xref: TAO:0001118 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001119 @@ -11932,7 +11935,7 @@ is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000255 ! paraxial mesoderm relationship: develops_from ZFA:0000787 ! mesenchyme derived from head neural crest relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001120 @@ -11942,9 +11945,9 @@ synonym: "neural ectoderm" EXACT [] synonym: "neurectoderm" EXACT [] xref: TAO:0001120 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001121 @@ -11953,8 +11956,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become the shield. Defined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001121 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000018 ! Gastrula:Germ-ring -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000018 ! gastrula:germ-ring +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0001122 @@ -11964,8 +11967,8 @@ def: "Portion of tissue that consists of a layer of cells that form during embry synonym: "embryonic germ layers" EXACT [] xref: TAO:0001122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000038 ! Larval:Day 6 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000038 ! larval:day 6 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001123 @@ -11976,7 +11979,7 @@ synonym: "median fin skeleton" EXACT [] synonym: "unpaired fin skeleton" EXACT [] xref: TAO:0001123 is_a: ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001124 @@ -11986,7 +11989,7 @@ def: "Median fin skeleton located on the dorsal surface of the organism." [TAO:c xref: TAO:0001124 is_a: ZFA:0001123 ! axial fin skeleton relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001125 @@ -11996,7 +11999,7 @@ def: "The dorsal marginal region of the YSL where maternal dorsal determinants l synonym: "Nieuwkoop center" EXACT [] xref: TAO:0001125 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield relationship: part_of ZFA:0000088 ! yolk syncytial layer [Term] @@ -12008,9 +12011,9 @@ synonym: "NEM" EXACT [] synonym: "noninvoluting endocytic marginal cells" EXACT PLURAL [] xref: TAO:0001126 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000017 ! gastrula:50%-epiboly relationship: part_of ZFA:0000038 ! margin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001127 @@ -12019,7 +12022,7 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for the perception of light." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001127 is_a: ZFA:0000282 ! sensory system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001128 @@ -12028,7 +12031,7 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 1" EXACT PLURAL [] xref: TAO:0001128 is_a: ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001129 @@ -12036,7 +12039,7 @@ name: pharyngeal pouches 2-6 namespace: zebrafish_anatomy xref: TAO:0001129 is_a: ZFA:0001106 ! pharyngeal pouch -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001130 @@ -12053,7 +12056,7 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 3" EXACT PLURAL [] xref: TAO:0001131 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001132 @@ -12062,7 +12065,7 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 6" EXACT PLURAL [] xref: TAO:0001132 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001133 @@ -12071,7 +12074,7 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 5" EXACT PLURAL [] xref: TAO:0001133 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001134 @@ -12080,7 +12083,7 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 4" EXACT PLURAL [] xref: TAO:0001134 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001135 @@ -12091,8 +12094,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0001135 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000133 ! neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001136 @@ -12103,7 +12106,7 @@ synonym: "subcutis" EXACT [] xref: TAO:0001136 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001137 @@ -12113,7 +12116,7 @@ def: "Tooth row that is the ventralmost row of teeth on ceratobranchial 5 bone." synonym: "ventral tooth rows" EXACT PLURAL [] xref: TAO:0001137 is_a: ZFA:0001642 ! tooth row -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001138 @@ -12158,7 +12161,7 @@ def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral to xref: TAO:0001142 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001143 @@ -12186,7 +12189,7 @@ def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to too xref: TAO:0001145 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001146 @@ -12222,7 +12225,7 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for olfaction. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001149 is_a: ZFA:0000282 ! sensory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001150 @@ -12260,9 +12263,9 @@ synonym: "dental primordium" EXACT [] synonym: "tooth germ" EXACT [] xref: TAO:0001153 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001174 ! pharyngeal epithelium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001154 @@ -12282,7 +12285,7 @@ xref: TAO:0001155 is_a: ZFA:0001574 ! autonomic nervous system relationship: develops_from ZFA:0001334 ! presumptive enteric nervous system relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001156 @@ -12292,9 +12295,9 @@ def: "Dorsolateral placode that gives rise to the posterior lateral line." [GOC: synonym: "posterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001156 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001157 @@ -12314,7 +12317,7 @@ namespace: zebrafish_anatomy def: "Anatomical system that produces, transports and secretes peptides." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001158 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001159 @@ -12323,7 +12326,7 @@ namespace: zebrafish_anatomy def: "System that provides protection against foreign and abnormal cells and removes cellular debris." [ISBN:0314472304] xref: TAO:0001159 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001160 @@ -12432,7 +12435,7 @@ is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001170 ! vertebra 4 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001172 @@ -12441,10 +12444,10 @@ namespace: zebrafish_anatomy def: "Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus. Located dorsal to the neural tube." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001172 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001191 ! supraneural 2 relationship: part_of ZFA:0001192 ! supraneural 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001173 @@ -12464,7 +12467,7 @@ xref: TAO:0001174 is_a: ZFA:0001495 ! unilaminar epithelium relationship: develops_from ZFA:0001104 ! pharyngeal endoderm relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001175 @@ -12473,7 +12476,7 @@ namespace: zebrafish_anatomy def: "Embryonic structure that is the dome of cytoplasm that segregates from the yolk toward the animal pole during and after the one cell-stage, and which undergoes cleavage." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001175 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000015 ! Blastula:Dome +relationship: end ZFS:0000015 ! blastula:dome [Term] id: ZFA:0001176 @@ -12483,8 +12486,8 @@ def: "Embryonic structure that is composed of the cellular part of the embryo, e xref: TAO:0001176 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001175 ! blastodisc -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0001177 @@ -12492,10 +12495,10 @@ name: roof plate spinal cord region namespace: zebrafish_anatomy xref: TAO:0001177 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001178 @@ -12504,9 +12507,9 @@ namespace: zebrafish_anatomy synonym: "ventral ectoderm" EXACT [] xref: TAO:0001178 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001179 @@ -12517,7 +12520,7 @@ xref: TAO:0001179 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001185 ! periderm relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001180 @@ -12528,7 +12531,7 @@ synonym: "basal epidermal layer" EXACT [] xref: TAO:0001180 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001181 @@ -12538,7 +12541,7 @@ def: "The tissue which lies between the basal stratum and the superficial stratu xref: TAO:0001181 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001182 @@ -12550,7 +12553,7 @@ xref: TAO:0001182 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001186 ! collagenous dermal stroma relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001183 @@ -12561,7 +12564,7 @@ synonym: "stratum laxum" EXACT [] xref: TAO:0001183 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001184 @@ -12572,7 +12575,7 @@ synonym: "pelvic fins" EXACT PLURAL [] xref: TAO:0001184 is_a: ZFA:0005596 ! paired fin relationship: develops_from ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001185 @@ -12583,9 +12586,9 @@ synonym: "EVL" RELATED [] xref: TAO:0001185 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000086 ! EVL -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001186 @@ -12595,9 +12598,9 @@ def: "Acellular anatomical structure that is a layer of collagen fibrils in the synonym: "primary dermal stroma" EXACT [] xref: TAO:0001186 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001187 @@ -12607,9 +12610,9 @@ def: "Embryonic structure that gives rise to the midbrain hindbrain boundary." [ synonym: "presumptive midbrain-hindbrain boundary" EXACT [] xref: TAO:0001187 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001188 @@ -12619,7 +12622,7 @@ def: "The Weberian apparatus consists of the modified anteriormost four vertebra xref: TAO:0001188 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001189 @@ -12630,7 +12633,7 @@ synonym: "vertebrae" EXACT PLURAL [] xref: TAO:0001189 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001190 @@ -12641,7 +12644,7 @@ synonym: "Weberian vertebrae" EXACT PLURAL [] xref: TAO:0001190 is_a: ZFA:0000263 ! precaudal vertebra relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001191 @@ -12680,7 +12683,7 @@ namespace: zebrafish_anatomy def: "Neural crest that is part of the head." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001194 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001195 @@ -12691,7 +12694,7 @@ synonym: "pars distalis" EXACT [] xref: TAO:0001195 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001282 ! adenohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001196 @@ -12709,7 +12712,7 @@ def: "Caudal portion of the adenohypophysis." [ZFIN:ZDB-PUB-080616-4] xref: TAO:0001197 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001282 ! adenohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001198 @@ -12720,8 +12723,8 @@ synonym: "pituitary placode" EXACT [] xref: TAO:0001198 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001178 ! non neural ectoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001199 @@ -12742,7 +12745,7 @@ namespace: zebrafish_anatomy def: "Islands of eosinic cells found on the lateroventral surface of the kidney. Function is thought to be that of the parathyroid gland in other vertebrates, which are lacking in fishes. These cells secrete hypocalcin (teleocalcin) to regulate calcium metabolism." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001200 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001201 @@ -12750,9 +12753,9 @@ name: ventral lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001201 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000083 ! ventral mesoderm -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0001202 @@ -12763,9 +12766,9 @@ synonym: "eye cup" EXACT [] xref: TAO:0001202 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000050 ! optic vesicle -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001203 @@ -12779,7 +12782,7 @@ synonym: "ciliary epithelial zone" EXACT [] xref: TAO:0001203 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001204 @@ -12789,7 +12792,7 @@ def: "Region of the mesoderm that is located along the rostral-caudal axis of th xref: TAO:0001204 is_a: ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0001378 ! axial hypoblast -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001205 @@ -12801,7 +12804,7 @@ xref: TAO:0001205 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: overlaps ZFA:0007117 ! Meckel's cartilage-palatoquadrate cartilage joint relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001206 @@ -12810,8 +12813,8 @@ namespace: zebrafish_anatomy synonym: "IM" EXACT [] xref: TAO:0001206 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001207 @@ -12820,9 +12823,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001207 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001208 @@ -12831,9 +12834,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 2." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001208 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001209 @@ -12842,9 +12845,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 7." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001209 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001210 @@ -12853,9 +12856,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 6." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001210 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001211 @@ -12864,9 +12867,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 5." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001211 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001212 @@ -12875,9 +12878,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 4." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001212 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001213 @@ -12886,9 +12889,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001213 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001214 @@ -12897,9 +12900,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 8." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001214 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001215 @@ -12922,7 +12925,7 @@ xref: TAO:0001216 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0005771 ! ectomesenchyme relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001217 @@ -12931,8 +12934,8 @@ namespace: zebrafish_anatomy def: "Tissue along the lateral edges of the shield that is fated to develop into the hypochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001217 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001218 @@ -12941,9 +12944,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, the part of the neural plate fated to become floor plate." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001218 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001220 @@ -12954,7 +12957,7 @@ synonym: "copulae" EXACT PLURAL [] xref: TAO:0001220 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001221 @@ -12973,8 +12976,8 @@ def: "Copula that is ventral, median, and associated with pharyngeal arches 6-7. synonym: "posterior copula" EXACT [] xref: TAO:0001222 is_a: ZFA:0001220 ! copula -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001223 @@ -12984,7 +12987,7 @@ def: "Basibranchial 1 ossifies posterior to the basihyal and anterior to the fir xref: TAO:0001223 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001224 @@ -12994,7 +12997,7 @@ def: "Basibranchial 2 ossifies in copula 1 posterior to the first hypobranchials xref: TAO:0001224 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001225 @@ -13004,7 +13007,7 @@ def: "Basibranchial 3 ossifies in copula 1 posterior to the second hypobranchial xref: TAO:0001225 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001226 @@ -13014,7 +13017,7 @@ def: "Occasionally, a fourth basibranchial ossifies in the narrow copula 2 carti xref: TAO:0001226 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001222 ! copula 2 -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001227 @@ -13150,7 +13153,7 @@ xref: TAO:0001237 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001520 ! ceratobranchial 1 cartilage relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001238 @@ -13181,7 +13184,7 @@ xref: TAO:0001240 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001519 ! ceratobranchial 4 cartilage relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001241 @@ -13192,7 +13195,7 @@ xref: TAO:0001241 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001518 ! ceratobranchial 3 cartilage relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001242 @@ -13203,7 +13206,7 @@ xref: TAO:0001242 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001517 ! ceratobranchial 2 cartilage relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001243 @@ -13214,7 +13217,7 @@ xref: TAO:0001243 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001528 ! epibranchial 1 cartilage relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001244 @@ -13235,7 +13238,7 @@ xref: TAO:0001245 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001531 ! epibranchial 4 cartilage relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001246 @@ -13246,7 +13249,7 @@ xref: TAO:0001246 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001530 ! epibranchial 2 cartilage relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001247 @@ -13258,7 +13261,7 @@ xref: TAO:0001247 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001529 ! epibranchial 3 cartilage relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001248 @@ -13278,7 +13281,7 @@ xref: TAO:0001249 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001369 ! anterior pancreatic bud relationship: part_of ZFA:0000140 ! pancreas -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001250 @@ -13290,7 +13293,7 @@ xref: TAO:0001250 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001536 ! pharyngobranchial 2 cartilage relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001251 @@ -13302,7 +13305,7 @@ synonym: "infrapharyngobranchials" EXACT [] xref: TAO:0001251 is_a: ZFA:0001533 ! pharyngobranchial cartilage relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001252 @@ -13314,7 +13317,7 @@ xref: TAO:0001252 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001534 ! pharyngobranchial 3 cartilage relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001253 @@ -13337,9 +13340,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the lateral part of the floor plate." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001256 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001257 @@ -13348,9 +13351,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the medial part of the floor plate and is located adjacent to the notochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001257 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001258 @@ -13360,10 +13363,10 @@ def: "Floor plate that is part of the rhombomeres." [GOC:mh, ORCiD:0000-0001-911 synonym: "floor plate hindbrain region" RELATED [] xref: TAO:0001258 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001259 @@ -13373,10 +13376,10 @@ synonym: "forebrain vesicle" EXACT [] synonym: "prosencephalic ventricle" EXACT [] xref: TAO:0001259 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000109 ! forebrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001260 @@ -13390,7 +13393,7 @@ xref: TAO:0001260 is_a: ZFA:0001489 ! compound organ component relationship: develops_from ZFA:0001370 ! posterior pancreatic bud relationship: part_of ZFA:0000140 ! pancreas -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001261 @@ -13399,7 +13402,7 @@ namespace: zebrafish_anatomy xref: TAO:0001261 is_a: ZFA:0001439 ! anatomical system relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001262 @@ -13410,9 +13413,9 @@ synonym: "gonadal primordium" EXACT [] synonym: "undifferentiated gonad" EXACT [] xref: TAO:0001262 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001263 @@ -13463,7 +13466,7 @@ synonym: "head vasculature" EXACT [] xref: TAO:0001267 is_a: ZFA:0005249 ! vasculature relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001268 @@ -13485,7 +13488,7 @@ def: "Fin undergoing the process of regeneration." [GOC:cvs, ORCiD:0000-0002-224 synonym: "regenerating fins" EXACT PLURAL [] xref: TAO:0001269 is_a: ZFA:0000108 ! fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001270 @@ -13533,7 +13536,7 @@ xref: TAO:0001273 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001274 @@ -13574,7 +13577,7 @@ xref: TAO:0001277 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005337 ! anterior swim bladder bud relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001278 @@ -13624,7 +13627,7 @@ xref: TAO:0001282 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001198 ! adenohypophyseal placode relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001283 @@ -13635,7 +13638,7 @@ synonym: "pupils" EXACT PLURAL [] xref: TAO:0001283 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001284 @@ -13646,9 +13649,9 @@ synonym: "choroid fissure" RELATED [] synonym: "optic fissures" EXACT PLURAL [] xref: TAO:0001284 is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001285 @@ -13661,10 +13664,10 @@ synonym: "segmental vessel" EXACT [] xref: TAO:0001285 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0000014 ! dorsal aorta -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001286 @@ -13673,8 +13676,8 @@ namespace: zebrafish_anatomy def: "Post-vent vasculature which forms an interconnecting network of venous tubes. The caudal vein plexus forms via a very active period of angiogenic sprouting, beginning at 25 hpf when venous endothelial cells of the posterior cardinal vein sprout and migrate ventrally, then fuse with neighboring tip cells. This process reiterates during a five-hour window, forming a primordial plexus by 30 hpf. By two days of development, the primitive caudal vein plexus has matured into a complex, well-perfused, venous vascular network. Starting at 4 dpf the caudal vein plexus starts to remodel and simplify." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010205-5, ZFIN:ZDB-PUB-111011-36] xref: TAO:0001286 is_a: ZFA:0005932 ! developmental vascular plexus -relationship: end ZFS:0000039 ! Larval:Days 7-13 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000039 ! larval:days 7-13 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001287 @@ -13697,7 +13700,7 @@ synonym: "renal glomeruli" EXACT PLURAL [] xref: TAO:0001288 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001289 @@ -13712,7 +13715,7 @@ synonym: "retinal proliferative zone" RELATED [] xref: TAO:0001289 is_a: ZFA:0000098 ! proliferative region relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001290 @@ -13722,10 +13725,10 @@ def: "Anterior part of the embryonic alimentary canal formed as an invagination synonym: "oral ectoderm" RELATED [ZFIN:ZDB-PUB-100726-23] xref: TAO:0001290 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000112 ! gut relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001291 @@ -13748,7 +13751,7 @@ synonym: "pineal stalk" EXACT [] xref: TAO:0001292 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001293 @@ -13759,7 +13762,7 @@ xref: TAO:0001293 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0000151 ! pronephros relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001294 @@ -13771,7 +13774,7 @@ xref: TAO:0001294 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007061 ! epibranchial field relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001295 @@ -13883,7 +13886,7 @@ synonym: "pharyngeal arches" EXACT PLURAL [] xref: TAO:0001306 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001307 @@ -13904,7 +13907,7 @@ xref: CARO:0000032 xref: TAO:0001308 is_a: ZFA:0000037 ! anatomical structure relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0001309 @@ -13915,9 +13918,9 @@ synonym: "neurogenic placodes" EXACT PLURAL [] xref: TAO:0001309 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001310 @@ -13936,10 +13939,10 @@ namespace: zebrafish_anatomy synonym: "roof plate hindbrain" RELATED [] xref: TAO:0001311 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001064 ! rhombomere relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001312 @@ -13980,9 +13983,9 @@ synonym: "AVC" EXACT [] xref: TAO:0001315 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001723 ! presumptive atrioventricular canal -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001316 @@ -13992,9 +13995,9 @@ def: "Dorsolateral placode that gives rise to the anterior lateral line." [GOC:y synonym: "anterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001316 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001317 @@ -14005,9 +14008,9 @@ comment: ZDB-PUB-080309-14 says these don't exist but looked at 55 hpf rather th synonym: "endocardial cushions" EXACT PLURAL [] xref: TAO:0001317 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001320 ! endocardium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001318 @@ -14016,9 +14019,9 @@ namespace: zebrafish_anatomy def: "The extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001318 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001319 @@ -14039,7 +14042,7 @@ xref: TAO:0001320 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001724 ! presumptive endocardium relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001321 @@ -14050,10 +14053,10 @@ synonym: "trabecula" EXACT [] synonym: "trabecular cartilage" EXACT [] xref: TAO:0001321 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001322 @@ -14063,7 +14066,7 @@ def: "A tract originating in the epiphysis and fasciculating with the tract of t synonym: "DVDT" EXACT [] xref: TAO:0001322 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown [Term] id: ZFA:0001323 @@ -14074,7 +14077,7 @@ xref: TAO:0001323 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005737 ! intestinal rod relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001324 @@ -14082,7 +14085,7 @@ name: enteric musculature namespace: zebrafish_anatomy def: "Musculature of the gut." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] synonym: "gut musculature" EXACT [] -synonym: "tunica muscularis" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] +synonym: "tunica muscularis" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0001324 is_a: ZFA:0000548 ! musculature system relationship: part_of ZFA:0000112 ! gut @@ -14114,7 +14117,7 @@ namespace: zebrafish_anatomy def: "Trunk musculature that is located in ventral wall of abdomen." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001327 is_a: ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001328 @@ -14126,7 +14129,7 @@ synonym: "neuromeres" EXACT PLURAL [] xref: TAO:0001328 is_a: ZFA:0001308 ! organism subdivision relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001329 @@ -14137,7 +14140,7 @@ synonym: "inner plexiform layer" EXACT [] xref: TAO:0001329 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001330 @@ -14148,7 +14151,7 @@ synonym: "retinal outer plexiform layers" EXACT PLURAL [] xref: TAO:0001330 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001331 @@ -14160,7 +14163,7 @@ synonym: "outer limiting membranes" EXACT PLURAL [] xref: TAO:0001331 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001332 @@ -14187,7 +14190,7 @@ def: "Presumptive structure fated to become enteric nervous system. Develops fr xref: TAO:0001334 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0000818 ! vagal neural crest -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001335 @@ -14218,7 +14221,7 @@ xref: TAO:0001338 is_a: ZFA:0001490 ! cavitated compound organ relationship: part_of ZFA:0000112 ! gut relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001339 @@ -14237,7 +14240,7 @@ def: "The nucleus containing the cell bodies of neurons whose axons form the pos synonym: "ntPOC" EXACT [] xref: TAO:0001340 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001341 @@ -14248,9 +14251,9 @@ synonym: "IZ" EXACT [] xref: TAO:0001341 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0001342 ! presumptive intervening zone -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001342 @@ -14259,9 +14262,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the intervening zone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001342 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001343 @@ -14271,7 +14274,7 @@ def: "Boundary between the telencephalon and diencephalon." [GOC:mh, ORCiD:0000- xref: TAO:0001343 is_a: ZFA:0001689 ! anatomical line relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001344 @@ -14282,7 +14285,7 @@ synonym: "zli" EXACT [] xref: TAO:0001344 is_a: ZFA:0001689 ! anatomical line relationship: part_of ZFA:0001215 ! thalamus -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001345 @@ -14293,7 +14296,7 @@ xref: TAO:0001345 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001346 ! interrenal primordium relationship: part_of ZFA:0000669 ! head kidney -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001346 @@ -14303,9 +14306,9 @@ def: "Multi-tissue structure located in the kidney that develops into the interr xref: TAO:0001346 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001206 ! intermediate mesoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001347 @@ -14317,7 +14320,7 @@ synonym: "strata fibrosum et griseum superficiales" EXACT PLURAL [] xref: TAO:0001347 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001348 @@ -14329,7 +14332,7 @@ synonym: "stratum fibrosum marginale" EXACT [ZFIN:ZDB-PUB-180207-5] xref: TAO:0001348 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001349 @@ -14340,7 +14343,7 @@ synonym: "strata opticum" EXACT PLURAL [] xref: TAO:0001349 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001350 @@ -14349,7 +14352,7 @@ namespace: zebrafish_anatomy xref: TAO:0001350 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001351 @@ -14360,7 +14363,7 @@ synonym: "strata album centrales" EXACT PLURAL [] xref: TAO:0001351 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001355 @@ -14382,7 +14385,7 @@ def: "The terminal nerve, located anterior to cranial nerve I, is comprised of a synonym: "nervus terminalis" EXACT [] xref: TAO:0001356 is_a: ZFA:0000641 ! cranial nerve -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001357 @@ -14391,9 +14394,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is ventrolateral to the roof plate and part of the midbrain." [ISBN:0444517383, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001357 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001358 @@ -14402,10 +14405,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the diencephalic region." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001358 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001359 @@ -14414,7 +14417,7 @@ namespace: zebrafish_anatomy xref: TAO:0001359 is_a: ZFA:0001512 ! anatomical group relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001360 @@ -14424,7 +14427,7 @@ def: "An unpaired left-sided accessory organ which plays a role in establishing xref: TAO:0001360 is_a: ZFA:0000496 ! compound organ relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001361 @@ -14458,7 +14461,7 @@ synonym: "Weberian supraneural" EXACT [] xref: TAO:0001363 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001364 @@ -14489,7 +14492,7 @@ synonym: "TPOC" EXACT [] xref: TAO:0001366 is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000059 ! postoptic commissure -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001367 @@ -14501,7 +14504,7 @@ xref: TAO:0001367 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007040 ! forebrain midbrain boundary neural tube relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001368 @@ -14510,10 +14513,10 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the forebrain midbrain boundary." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001368 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001369 @@ -14527,7 +14530,7 @@ synonym: "ventral pancreatic anlage" EXACT [] xref: TAO:0001369 is_a: ZFA:0001390 ! pancreatic bud relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0001370 @@ -14540,7 +14543,7 @@ synonym: "dorsal pancreatic anlage" EXACT [] synonym: "dorsal posterior bud" RELATED [ZFIN:ZDB-PUB-030902-16] xref: TAO:0001370 is_a: ZFA:0001390 ! pancreatic bud -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001371 @@ -14551,7 +14554,7 @@ xref: TAO:0001371 is_a: ZFA:0001439 ! anatomical system relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001372 @@ -14562,7 +14565,7 @@ xref: TAO:0001372 is_a: ZFA:0005162 ! digestive system duct relationship: develops_from ZFA:0001369 ! anterior pancreatic bud relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0001373 @@ -14574,9 +14577,9 @@ synonym: "migratory slow muscle precursor cells" EXACT PLURAL [] xref: TAO:0001373 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000003 ! adaxial cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001374 @@ -14587,7 +14590,7 @@ xref: TAO:0001374 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001375 @@ -14610,7 +14613,7 @@ def: "Presumptive structure at the animal poll of the blastula that will develop synonym: "presumptive epidermis" EXACT [] xref: TAO:0001376 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0001377 @@ -14619,7 +14622,7 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become mesoderm. Determined by fate mapping." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001377 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0001378 @@ -14629,9 +14632,9 @@ def: "Region of the hypoblast that is located along the rostral-caudal axis of t xref: TAO:0001378 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000071 ! shield -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000117 ! hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001379 @@ -14639,9 +14642,9 @@ name: pharyngeal ectoderm namespace: zebrafish_anatomy xref: TAO:0001379 is_a: ZFA:0000016 ! ectoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001381 @@ -14672,8 +14675,8 @@ def: "Surface structure that develops into a paired fin." [GOC:mh, ORCiD:0000-00 synonym: "fin buds" EXACT PLURAL [] xref: TAO:0001383 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000042 ! juvenile:days 30-44 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001384 @@ -14684,7 +14687,7 @@ synonym: "pelvic fin buds" EXACT PLURAL [] xref: TAO:0001384 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001454 ! pelvic fin field -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001385 @@ -14695,7 +14698,7 @@ synonym: "apical ectodermal ridge pelvic fin buds" EXACT PLURAL [] xref: TAO:0001385 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: part_of ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001386 @@ -14705,9 +14708,9 @@ def: "Mesoderm part of pelvic fin bud." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "mesoderm pelvic fin buds" EXACT PLURAL [] xref: TAO:0001386 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001387 @@ -14726,7 +14729,7 @@ synonym: "epithelial mesenchymal boundarys" EXACT PLURAL [] xref: TAO:0001388 is_a: ZFA:0001689 ! anatomical line relationship: part_of ZFA:0001269 ! regenerating fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001389 @@ -14749,9 +14752,9 @@ synonym: "pancreatic buds" EXACT PLURAL [] xref: TAO:0001390 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000254 ! pancreas primordium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001391 @@ -14819,7 +14822,7 @@ def: "Posterior to the Weberian apparatus, otophysan supraneurals form as median synonym: "post-Weberian supraneurals" EXACT PLURAL [] xref: TAO:0001397 is_a: ZFA:0000442 ! supraneural -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001399 @@ -14833,7 +14836,7 @@ xref: TAO:0001399 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: overlaps ZFA:0007117 ! Meckel's cartilage-palatoquadrate cartilage joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001400 @@ -14844,7 +14847,7 @@ xref: TAO:0001400 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: overlaps ZFA:0005885 ! operculohyoid ligament relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001401 @@ -14875,7 +14878,7 @@ xref: TAO:0001403 is_a: ZFA:0001590 ! dermal bone relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001404 @@ -14889,7 +14892,7 @@ is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001405 ! ethmoid cartilage relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001405 @@ -14899,10 +14902,10 @@ def: "Bilaterally paired neurocranium cartilage which is initially plate-like an synonym: "ethmoid plate" EXACT [] xref: TAO:0001405 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000042 ! juvenile:days 30-44 relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001406 @@ -14915,7 +14918,7 @@ relationship: develops_from ZFA:0000585 ! kinethmoid cartilage relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001407 @@ -14925,7 +14928,7 @@ def: "Plate like dermal bone, variable in size, though usually one of the smalle xref: TAO:0001407 is_a: ZFA:0000376 ! infraorbital relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001408 @@ -14935,7 +14938,7 @@ def: "Plate like dermal bone, variable in size, but usually largest in the serie xref: TAO:0001408 is_a: ZFA:0000376 ! infraorbital relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001409 @@ -14945,7 +14948,7 @@ def: "Plate like dermal bone. Usually fused with infraorbital 3." [GOC:mh, ORCiD xref: TAO:0001409 is_a: ZFA:0000376 ! infraorbital relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001410 @@ -14984,7 +14987,7 @@ relationship: overlaps ZFA:0005891 ! epiotic-parietal joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001414 @@ -15046,7 +15049,7 @@ synonym: "dorsal fin support" EXACT [] xref: TAO:0001419 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0001124 ! dorsal fin skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001420 @@ -15078,7 +15081,7 @@ synonym: "hyomandibular cartilage" EXACT [] xref: TAO:0001422 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001423 @@ -15088,11 +15091,11 @@ def: "Rod-shaped paired cartilages on either side of the notochord. They unite, synonym: "parachordal cartilages" EXACT PLURAL [] xref: TAO:0001423 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001424 @@ -15105,7 +15108,7 @@ synonym: "neurocranium" RELATED [] xref: TAO:0001424 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001425 @@ -15125,7 +15128,7 @@ synonym: "excurrent nostril" EXACT [ZFIN:ZDB-PUB-961014-399] synonym: "posterior nares" EXACT PLURAL [] xref: TAO:0001426 is_a: ZFA:0000550 ! naris -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001427 @@ -15136,7 +15139,7 @@ synonym: "anterior nares" EXACT PLURAL [] synonym: "incurrent nostril" EXACT [ZFIN:ZDB-PUB-961014-399] xref: TAO:0001427 is_a: ZFA:0000550 ! naris -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001428 @@ -15148,7 +15151,7 @@ synonym: "olfactory rosettes" EXACT PLURAL [] xref: TAO:0001428 is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001429 @@ -15168,7 +15171,7 @@ def: "A duct connecting the esophagus to the posterior chamber of the swim bladd xref: TAO:0001430 is_a: ZFA:0005171 ! duct relationship: continuous_with ZFA:0000204 ! esophagus -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001431 @@ -15176,9 +15179,9 @@ name: primitive olfactory epithelium namespace: zebrafish_anatomy xref: TAO:0001431 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000048 ! olfactory placode -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001432 @@ -15206,10 +15209,10 @@ def: "Floor plate that is part of the neural tube." [GOC:mh, GOC:ymb, ORCiD:0000 xref: TAO:0001434 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000887 ! floor plate neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001435 @@ -15218,9 +15221,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue on the side of the lumen of the neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001435 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001436 @@ -15229,10 +15232,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001436 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001437 @@ -15271,9 +15274,9 @@ namespace: zebrafish_anatomy def: "The interface between the dorsal neuroepithelium and the roof plate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001440 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001441 @@ -15282,7 +15285,7 @@ namespace: zebrafish_anatomy def: "Posterior portion of the rhombic lip contained within rhombomeres 2-8. Gives rise to several brainstem nuclei and choroid plexus." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001441 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0000822 ! rhombomere 2 @@ -15291,7 +15294,7 @@ relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001440 ! rhombic lip -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001442 @@ -15300,10 +15303,10 @@ namespace: zebrafish_anatomy def: "Anterior-most region of dorsal hindbrain within rhombomere 1, adjacent the midbrain-hindbrain boundary." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001442 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001440 ! rhombic lip -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001443 @@ -15360,7 +15363,7 @@ synonym: "ultimobranchial bodies" EXACT PLURAL [] xref: TAO:0001448 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001449 @@ -15372,7 +15375,7 @@ xref: TAO:0001449 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0001386 ! mesoderm pelvic fin bud relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001450 @@ -15384,7 +15387,7 @@ xref: TAO:0001450 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: develops_from ZFA:0001385 ! apical ectodermal ridge pelvic fin bud relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001451 @@ -15394,9 +15397,9 @@ def: "A small group of mesodermal cells located at the posterior margin of the d synonym: "ZPA" RELATED [] xref: TAO:0001451 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000789 ! mesoderm pectoral fin bud -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001452 @@ -15406,9 +15409,9 @@ def: "A small group of mesodermal cells located at the posterior margin of the d synonym: "ZPA" RELATED [] xref: TAO:0001452 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001386 ! mesoderm pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001453 @@ -15418,9 +15421,9 @@ def: "Embryonic region that develops into the pectoral fin bud." [GOC:mh, ORCiD: synonym: "pectoral fin fields" EXACT PLURAL [] xref: TAO:0001453 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001454 @@ -15430,9 +15433,9 @@ def: "Portion of tissue in the pelvic region that develops into the pelvic fin b synonym: "pelvic fin fields" EXACT PLURAL [] xref: TAO:0001454 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001455 @@ -15443,7 +15446,7 @@ synonym: "coraco-scapular cartilage" EXACT [] synonym: "scapulo-coracoid cartilage" EXACT [] xref: TAO:0001455 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0000407 ! pectoral girdle [Term] @@ -15454,8 +15457,8 @@ def: "A plate-like chondrogenic condensation within the pectoral fin, which subd synonym: "fin plate cartilage" EXACT [] xref: TAO:0001456 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001457 @@ -15516,9 +15519,9 @@ synonym: "somite border cell" EXACT PLURAL [] synonym: "somite boundary" RELATED [] xref: TAO:0001462 is_a: ZFA:0005594 ! anatomical surface -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001463 @@ -15529,7 +15532,7 @@ synonym: "melanophore stripes" EXACT PLURAL [] xref: TAO:0001463 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001464 @@ -15540,7 +15543,7 @@ synonym: "retinal outer nuclear layers" EXACT PLURAL [] xref: TAO:0001464 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001465 @@ -15551,7 +15554,7 @@ synonym: "photoreceptor inner segment layers" EXACT PLURAL [] xref: TAO:0001465 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000143 ! retinal photoreceptor layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001466 @@ -15562,7 +15565,7 @@ synonym: "photoreceptor outer segment layers" EXACT PLURAL [] xref: TAO:0001466 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000143 ! retinal photoreceptor layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001467 @@ -15570,9 +15573,9 @@ name: pharyngeal mesoderm namespace: zebrafish_anatomy xref: TAO:0001467 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001468 @@ -15591,7 +15594,7 @@ synonym: "lateral lines" EXACT PLURAL [] xref: TAO:0001469 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001470 @@ -15621,7 +15624,7 @@ synonym: "neuromast anterior" EXACT [] xref: TAO:0001472 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001473 @@ -15632,7 +15635,7 @@ subset: cell_slim synonym: "deep blastomeres" EXACT PLURAL [] xref: TAO:0001473 is_a: ZFA:0000093 ! blastomere -relationship: start ZFS:0000007 ! Cleavage:64-cell +relationship: start ZFS:0000007 ! cleavage:64-cell [Term] id: ZFA:0001474 @@ -15660,7 +15663,7 @@ def: "Anatomical structure, that consists of similar cells and intercellular mat xref: CARO:0000043 xref: TAO:0001477 is_a: ZFA:0000037 ! anatomical structure -relationship: start ZFS:0000012 ! Blastula:High +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001478 @@ -15670,7 +15673,7 @@ def: "Anatomical group that has its parts adjacent to one another." [GOC:mh, ORC xref: CARO:0000041 xref: TAO:0001478 is_a: ZFA:0001512 ! anatomical group -relationship: start ZFS:0000012 ! Blastula:High +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001479 @@ -15724,7 +15727,7 @@ synonym: "middle lateral line ganglia" EXACT PLURAL [] xref: TAO:0001483 is_a: ZFA:0000120 ! lateral line ganglion relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001484 @@ -15735,7 +15738,7 @@ subset: cell_slim synonym: "superficial blastomeres" EXACT PLURAL [] xref: TAO:0001484 is_a: ZFA:0000093 ! blastomere -relationship: start ZFS:0000007 ! Cleavage:64-cell +relationship: start ZFS:0000007 ! cleavage:64-cell [Term] id: ZFA:0001485 @@ -15746,7 +15749,7 @@ synonym: "basal laminae" EXACT PLURAL [] xref: CARO:0000065 xref: TAO:0001485 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001486 @@ -15756,7 +15759,7 @@ def: "Portion of tissue, that consists of one or more layers of epithelial cells xref: CARO:0000066 xref: TAO:0001486 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001487 @@ -15766,9 +15769,9 @@ def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; xref: CARO:0000004 xref: TAO:0001487 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001488 @@ -15779,7 +15782,7 @@ synonym: "multi-tissue structures" EXACT PLURAL [] xref: CARO:0000055 xref: TAO:0001488 is_a: ZFA:0000037 ! anatomical structure -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001489 @@ -15927,7 +15930,7 @@ def: "Cranial cartilage which is bilaterally paired and develops as a dorsal pla synonym: "laminas orbitonasalis" EXACT PLURAL [] xref: TAO:0001503 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001580 ! neurocranium [Term] @@ -15938,7 +15941,7 @@ def: "Cranial cartilage which is a paired anterodorsal projection of the posteri synonym: "occipital arch cartilages" EXACT PLURAL [] xref: TAO:0001504 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001580 ! neurocranium [Term] @@ -15971,7 +15974,7 @@ synonym: "trabeculae cranii" EXACT PLURAL [] xref: TAO:0001507 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: part_of ZFA:0001321 ! neurocranial trabecula -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001508 @@ -15992,7 +15995,7 @@ synonym: "scleral cartilage" RELATED [] synonym: "sclerotic cartilages" EXACT PLURAL [] xref: TAO:0001509 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001510 @@ -16015,7 +16018,7 @@ synonym: "stylohyal" EXACT [] xref: TAO:0001511 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001512 @@ -16026,7 +16029,7 @@ def: "Anatomical structure consisting of at least two non-overlapping organs, mu xref: CARO:0000054 xref: TAO:0001512 is_a: ZFA:0000037 ! anatomical structure -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001513 @@ -16037,7 +16040,7 @@ synonym: "dermomyotomes" EXACT PLURAL [] xref: TAO:0001513 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000155 ! somite -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001514 @@ -16070,7 +16073,7 @@ synonym: "ceratobranchial cartilages" EXACT PLURAL [] xref: TAO:0001516 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001517 @@ -16079,9 +16082,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001517 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001518 @@ -16090,9 +16093,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001518 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001519 @@ -16101,9 +16104,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001519 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001520 @@ -16112,7 +16115,7 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that forms between hypobranchial 1 and epibranchial 1." [TAO:curator] xref: TAO:0001520 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton [Term] @@ -16133,7 +16136,7 @@ synonym: "hypobranchial cartilages" EXACT PLURAL [] xref: TAO:0001522 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001523 @@ -16192,7 +16195,7 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone and the medial end of pharyngobranchial 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001528 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton [Term] @@ -16202,7 +16205,7 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone and the medial end of pharyngobranchial 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001529 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton [Term] @@ -16212,7 +16215,7 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone and the medial end of pharyngobranchial 2." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001530 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton [Term] @@ -16222,7 +16225,7 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone and the medial end of pharyngobranchial 4." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001531 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton [Term] @@ -16249,7 +16252,7 @@ def: "Paired elongate cartilages that lie posteromedial to epibranchial 2 and me synonym: "pharyngobranchial 3 cartilages" EXACT PLURAL [] xref: TAO:0001534 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton [Term] @@ -16268,7 +16271,7 @@ def: "Paired disc-like cartilage lying medial to and between the medial tips of synonym: "pharyngobranchial 2 cartilages" EXACT PLURAL [] xref: TAO:0001536 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton [Term] @@ -16279,7 +16282,7 @@ def: "Cartilage that develops initially on the medial side of the coraco-scapula synonym: "mesocorocoid cartilages" EXACT PLURAL [] xref: TAO:0001537 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001538 @@ -16440,7 +16443,7 @@ synonym: "epibranchial ganglia" EXACT PLURAL [] xref: TAO:0001555 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0001294 ! epibranchial placode -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001556 @@ -16451,7 +16454,7 @@ synonym: "paravertebral ganglion" EXACT [] xref: TAO:0001556 is_a: ZFA:0001573 ! trunk ganglion relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001557 @@ -16463,9 +16466,9 @@ synonym: "pronephric glomeruli" EXACT PLURAL [] synonym: "pronephric glomus " EXACT [] xref: TAO:0001557 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001558 @@ -16475,9 +16478,9 @@ def: "Bilaterally paired tubes connecting the pronephric glomeruli to the pronep synonym: "ciliated neck segment" EXACT [] xref: TAO:0001558 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001559 @@ -16502,7 +16505,7 @@ namespace: zebrafish_anatomy def: "Hypural of the caudal fin dorsal to hypural 1. Supports the lower lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001561 is_a: ZFA:0000364 ! hypural -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0001562 @@ -16511,7 +16514,7 @@ namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 2 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001562 is_a: ZFA:0000364 ! hypural -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001563 @@ -16520,7 +16523,7 @@ namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 3 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001563 is_a: ZFA:0000364 ! hypural -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001564 @@ -16529,7 +16532,7 @@ namespace: zebrafish_anatomy def: "Dorsal-most hypural, that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001564 is_a: ZFA:0000364 ! hypural -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001565 @@ -16545,7 +16548,7 @@ synonym: "Stage 2 oocyte" EXACT [] xref: TAO:0001565 is_a: ZFA:0001109 ! oocyte relationship: part_of ZFA:0001265 ! ovarian follicle stage II -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001566 @@ -16561,7 +16564,7 @@ synonym: "vitellogenic oocytes" EXACT [] xref: TAO:0001566 is_a: ZFA:0001109 ! oocyte relationship: part_of ZFA:0001266 ! ovarian follicle stage III -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001567 @@ -16577,7 +16580,7 @@ synonym: "Stage 1 oocyte" EXACT [] xref: TAO:0001567 is_a: ZFA:0001109 ! oocyte relationship: part_of ZFA:0001263 ! ovarian follicle stage I -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001568 @@ -16593,7 +16596,7 @@ synonym: "Stage 4 oocyte" EXACT [] xref: TAO:0001568 is_a: ZFA:0001109 ! oocyte relationship: part_of ZFA:0001264 ! ovarian follicle stage IV -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001569 @@ -16606,7 +16609,7 @@ synonym: "mature egg" EXACT [] synonym: "unactivated egg" EXACT [] xref: TAO:0001569 is_a: ZFA:0001109 ! oocyte -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001570 @@ -16621,8 +16624,8 @@ xref: CL:0000025 xref: TAO:0001570 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001569 ! oocyte stage V -relationship: end ZFS:0000001 ! Zygote:1-cell -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000001 ! zygote:1-cell +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001571 @@ -16643,7 +16646,7 @@ synonym: "superior sympathetic cervical ganglion" EXACT [] xref: TAO:0001572 is_a: ZFA:0001573 ! trunk ganglion relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001573 @@ -16653,7 +16656,7 @@ def: "Ganglion which is located in the trunk." [GOC:mh, ORCiD:0000-0001-9114-873 synonym: "trunk ganglia" EXACT PLURAL [] xref: TAO:0001573 is_a: ZFA:0000190 ! ganglion -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001574 @@ -16834,7 +16837,7 @@ is_a: ZFA:0000461 ! Weberian ossicle is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: develops_from ZFA:0000637 ! claustrum cartilage -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001593 @@ -16845,7 +16848,7 @@ synonym: "quadrate ventral processes" EXACT PLURAL [] xref: TAO:0000224 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000621 ! quadrate -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001594 @@ -16895,7 +16898,7 @@ xref: TAO:0000348 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000661 ! exoccipital relationship: part_of ZFA:0001627 ! lagenar capsule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001598 @@ -16914,7 +16917,7 @@ namespace: zebrafish_anatomy xref: TAO:0002214 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0001171 ! os suspensorium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001600 @@ -16936,7 +16939,7 @@ synonym: "manubrium incudus" EXACT [] xref: TAO:0001553 is_a: ZFA:0001636 ! membrane bone relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001602 @@ -16946,7 +16949,7 @@ def: "Bony process that develops as a dorsally projecting cartilaginous extensi xref: TAO:0001548 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001603 @@ -16957,7 +16960,7 @@ synonym: "articular process" RELATED [] xref: TAO:0001549 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001604 @@ -16968,7 +16971,7 @@ synonym: "caudal fin dorsal lobe" EXACT [] xref: TAO:0001593 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001605 @@ -16979,7 +16982,7 @@ synonym: "caudal fin ventral lobe" EXACT [] xref: TAO:0001594 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001606 @@ -17110,7 +17113,7 @@ xref: TAO:0001621 is_a: ZFA:0001487 ! portion of organism substance relationship: part_of ZFA:0000051 ! otic vesicle relationship: part_of ZFA:0000559 ! otolith organ -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001618 @@ -17128,7 +17131,7 @@ synonym: "optic fiber layers" EXACT PLURAL [] xref: TAO:0002212 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001620 @@ -17138,7 +17141,7 @@ def: "Most anterior portion of the pronephric duct (or tubule as described by Wi synonym: "PCT" EXACT [] xref: TAO:0002238 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct [Term] @@ -17149,7 +17152,7 @@ def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2 synonym: "proximal straight tubules" EXACT PLURAL [] xref: TAO:0002239 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct [Term] @@ -17160,7 +17163,7 @@ def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2 synonym: "pronephric distal early tubules" EXACT PLURAL [] xref: TAO:0002236 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct [Term] @@ -17171,7 +17174,7 @@ def: "Most posterior portion of the pronephric duct (or tubule as described by W synonym: "posterior pronephric ducts" EXACT PLURAL [] xref: TAO:0002225 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct [Term] @@ -17181,7 +17184,7 @@ namespace: zebrafish_anatomy def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the distal early tubule." [ZFIN:ZDB-PUB-071029-9] synonym: "distal late tubules" EXACT PLURAL [] is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct [Term] @@ -17258,7 +17261,7 @@ def: "Portion of tissue that consists of mesodermally derived cells and intercel xref: TAO:0001641 xref: VSAO:0000017 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001633 @@ -17336,9 +17339,9 @@ def: "Ventral bend in the brain occurring caudal to the adenohypophyseal placode synonym: "ventral flexure" EXACT [] xref: TAO:0002181 is_a: ZFA:0005593 ! neuraxis flexure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001641 @@ -17368,8 +17371,8 @@ synonym: "anatomical spaces" EXACT PLURAL [] xref: CARO:0000005 xref: TAO:0001668 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001644 @@ -17416,8 +17419,8 @@ namespace: zebrafish_anatomy def: "Neural crest that migrates into the pharyngeal arches and heart, forming connective tissue that separates the vessels of the heart." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0002173 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001649 @@ -17427,7 +17430,7 @@ def: "Anatomical cluster that is the series of dermal bones associated with the synonym: "circumorbital series" EXACT [] xref: TAO:0001709 is_a: ZFA:0001478 ! anatomical cluster -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001650 @@ -17436,7 +17439,7 @@ namespace: zebrafish_anatomy synonym: "gill mesenchyme" EXACT [] xref: TAO:0002172 is_a: ZFA:0000113 ! head mesenchyme -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001651 @@ -17451,7 +17454,7 @@ xref: TAO:0000283 xref: TAO:0002200 is_a: ZFA:0000236 ! mandibular muscle relationship: has_developmental_contribution_from ZFA:0005923 ! anterior migratory muscle precursor stream -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001652 @@ -17481,7 +17484,7 @@ def: "Anatomical space which is located beneath the operculum and external to th xref: TAO:0002154 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001655 @@ -17493,7 +17496,7 @@ xref: TAO:0002220 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0001438 ! coelom relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001656 @@ -17507,7 +17510,7 @@ xref: TAO:0002224 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0001438 ! coelom relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001657 @@ -17563,7 +17566,7 @@ def: "The portion of tissue that is the initial segment of one of the cranial ne xref: TAO:0002190 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000641 ! cranial nerve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001665 @@ -17619,7 +17622,7 @@ xref: TAO:0001821 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000135 ! notochord relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001671 @@ -17628,9 +17631,9 @@ namespace: zebrafish_anatomy def: "Epithelium that is the primary epithelium of the developing inner ear and has anterior and posterior maculae as its parts. These maculae later move apart into distinct regions of epithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-383] xref: TAO:0002206 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001672 @@ -17642,7 +17645,7 @@ xref: TAO:0002193 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000262 ! posterior semicircular canal relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001673 @@ -17652,7 +17655,7 @@ def: "Podocyte that is part of the pronephros." [GOC:cvs, ORCiD:0000-0002-2244-7 subset: cell_slim xref: TAO:0002237 is_a: ZFA:0009285 ! podocyte -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus [Term] @@ -17664,7 +17667,7 @@ subset: cell_slim xref: TAO:0002208 is_a: ZFA:0009285 ! podocyte relationship: part_of ZFA:0001288 ! renal glomerulus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001675 @@ -17690,9 +17693,9 @@ namespace: zebrafish_anatomy def: "Floor plate that is part of the midbrain." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002196 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001678 @@ -17702,8 +17705,8 @@ def: "Multi-tissue structure that consists of the structures that develop into t comment: Dbxref for ZFIN changed to match actual database accession number. Old Dbxref ZDB-ANAT-090226-1 correct Dbxref ZDB-ANAT-090227-5. xref: TAO:0002201 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001679 @@ -17718,9 +17721,9 @@ synonym: "presumptive lens" RELATED [] xref: TAO:0002205 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000122 ! lens placode -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001680 @@ -17759,7 +17762,7 @@ xref: TAO:0002142 xref: TAO:0002143 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Melissa Haendel creation_date: 2009-03-23T01:50:38Z @@ -17771,7 +17774,7 @@ def: "Portion of tissue comprised of four to six layers of nonkeratinized, strat xref: TAO:0002187 is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:11:11Z @@ -17785,7 +17788,7 @@ synonym: "anterior limiting membrane" RELATED [] xref: TAO:0002155 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Melissa Haendel creation_date: 2009-03-23T02:11:47Z @@ -17797,7 +17800,7 @@ def: "Portion of tissue that is located basal to Bowman's layer and distal to De xref: TAO:0002189 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:16Z @@ -17810,7 +17813,7 @@ synonym: "posterior limiting membrane" EXACT [] xref: TAO:0002157 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:32Z @@ -17822,7 +17825,7 @@ def: "Epithelium that is the innermost layer of the cornea and is comprised of a xref: TAO:0002186 is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:13:25Z @@ -17833,9 +17836,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002188 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-03-23T04:36:20Z @@ -17847,8 +17850,8 @@ def: "Non-material anatomical entity of one dimension, which forms a boundary of xref: CARO:0000008 xref: TAO:0001837 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell created_by: Melissa Haendel creation_date: 2009-04-30T02:46:34Z @@ -17884,7 +17887,7 @@ def: "CNS white matter that crosses the midline within the hindbrain." [GOC:mh, xref: TAO:0002199 is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-06-18T12:33:21Z @@ -17929,7 +17932,7 @@ def: "Motor nucleus of vagal nerve that is located within the medial portion of synonym: "mmX" EXACT [] xref: TAO:0002207 is_a: ZFA:0000387 ! motor nucleus of vagal nerve -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Melissa Haendel creation_date: 2009-08-04T10:45:00Z @@ -18004,8 +18007,8 @@ namespace: zebrafish_anatomy def: "Proliferative region that is part of the developing fin fold or fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002146 is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-08-05T02:38:05Z @@ -18016,9 +18019,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is a thickening and reshaping of the epidermal basal stratum cells beneath which fibroblasts accumulate to form the scale primordium." [ZFIN:ZDB-PUB-081008-12] xref: TAO:0002195 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001180 ! epidermal basal stratum -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:22:18Z @@ -18031,9 +18034,9 @@ synonym: "scale placode" RELATED [] synonym: "scale primordia " EXACT PLURAL [] xref: TAO:0002242 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:35:05Z @@ -18056,7 +18059,7 @@ def: "Portion of tissue that is part of the corpus cerebelli and contains Purkin xref: TAO:0002240 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-11T09:41:06Z @@ -18091,7 +18094,7 @@ def: "Portion of tissue that is part of the valvula cerebelli and contains Purki xref: TAO:0002241 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:00:08Z @@ -18105,7 +18108,7 @@ xref: TAO:0002210 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:02:35Z @@ -18119,7 +18122,7 @@ xref: TAO:0002185 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:18:48Z @@ -18131,9 +18134,9 @@ def: "Portion of tissue that is part of the heart tube and will become the bulbu xref: TAO:0002230 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000818 ! vagal neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:25:06Z @@ -18147,7 +18150,7 @@ xref: TAO:0002218 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000394 ! molecular layer corpus cerebelli relationship: part_of ZFA:0000913 ! molecular layer valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T04:32:51Z @@ -18158,7 +18161,7 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become ventral mesoderm. Determined by fate mapping." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002235 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield created_by: Melissa Haendel creation_date: 2009-08-24T11:02:45Z @@ -18169,9 +18172,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue within the otic vesicle that consists of a thin layer of otic epithelium covering a finger-shaped core of acellular matrix." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-090330-11] xref: TAO:0002215 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000051 ! otic vesicle -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Melissa Haendel creation_date: 2009-08-25T10:45:23Z @@ -18182,7 +18185,7 @@ namespace: zebrafish_anatomy def: "Otic vesicle protrusion that is initially ventrally located and then fuses with the lateral protrusion, giving rise to the pillar of the lateral semicircular canal." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-090330-11] xref: TAO:0002216 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-08-25T10:53:24Z @@ -18194,7 +18197,7 @@ def: "Portion of tissue around which the semicircular canals flow." [GOC:ymb, OR xref: TAO:0002223 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000431 ! semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Melissa Haendel creation_date: 2009-08-25T10:57:52Z @@ -18206,9 +18209,9 @@ def: "Multi-tissue structure that is part of the heart tube and will become the xref: TAO:0002228 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001721 ! presumptive atrium primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:20:59Z @@ -18221,9 +18224,9 @@ xref: TAO:0002231 xref: ZFA:0002231 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001720 ! presumptive cardiac ventricle primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:21:18Z @@ -18234,9 +18237,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac ventricle." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002232 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:23Z @@ -18247,9 +18250,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac atrium." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002229 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:28Z @@ -18260,9 +18263,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the sinus venosus." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002234 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:40:57Z @@ -18273,9 +18276,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the atrioventricular canal." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002227 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Melissa Haendel creation_date: 2009-08-31T11:57:36Z @@ -18286,9 +18289,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the endocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002233 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T01:21:44Z @@ -18302,9 +18305,9 @@ subset: cell_slim xref: CL:0002377 xref: TAO:0002203 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Melissa Haendel creation_date: 2009-09-08T02:10:35Z @@ -18316,9 +18319,9 @@ def: "Artery that extends horizontally across the brain midline which is fed by synonym: "BCA" EXACT [] xref: TAO:0005000 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005001 @@ -18331,7 +18334,7 @@ synonym: "PCS" EXACT [] synonym: "posterior communicating segment of the basilar artery" EXACT [] xref: TAO:0005001 is_a: ZFA:0000005 ! artery -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005002 @@ -18342,7 +18345,7 @@ synonym: "BA" EXACT [] xref: TAO:0005002 is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005003 @@ -18366,7 +18369,7 @@ synonym: "branchial aortic arches " EXACT PLURAL [ZFIN:ZDB-PUB-080512-6] xref: TAO:0005004 is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005005 @@ -18377,7 +18380,7 @@ synonym: "AA1" EXACT [] synonym: "mandibular aortic arch" EXACT [] xref: TAO:0005005 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001612 ! pharyngeal arch 1 [Term] @@ -18389,7 +18392,7 @@ synonym: "AA2" EXACT [] synonym: "hyoid aortic arch" EXACT [] xref: TAO:0005006 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001611 ! pharyngeal arch 2 [Term] @@ -18401,7 +18404,7 @@ synonym: "AA3" EXACT [] xref: TAO:0005007 is_a: ZFA:0005004 ! aortic arch relationship: part_of ZFA:0001606 ! pharyngeal arch 3 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005008 @@ -18412,7 +18415,7 @@ synonym: "AA4" EXACT [] xref: TAO:0005008 is_a: ZFA:0005004 ! aortic arch relationship: part_of ZFA:0001607 ! pharyngeal arch 4 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005009 @@ -18423,7 +18426,7 @@ synonym: "AA5" EXACT [] xref: TAO:0005009 is_a: ZFA:0005004 ! aortic arch relationship: part_of ZFA:0001608 ! pharyngeal arch 5 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005010 @@ -18436,9 +18439,9 @@ synonym: "mid-cerebral vein" EXACT [] synonym: "middle cerebral vein" EXACT [] xref: TAO:0005010 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005011 @@ -18449,8 +18452,8 @@ synonym: "pseudobranchial arteries" EXACT PLURAL [] xref: TAO:0005011 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005012 @@ -18505,9 +18508,9 @@ def: "Aortic arch that is part of pharyngeal arch 6. Aortic arch 6 artery is pai synonym: "AA6" EXACT [] xref: TAO:0005016 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001609 ! pharyngeal arch 6 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005017 @@ -18517,9 +18520,9 @@ def: "The vessel between the anterior cerebral vein and the mid cerebral vein." synonym: "PMBC" EXACT [] xref: TAO:0005017 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005018 @@ -18552,9 +18555,9 @@ def: "Artery that irrigates the forebrain and midbrain." [ZFIN:ZDB-PUB-010205-5] synonym: "CtA" EXACT [] xref: TAO:0005020 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005021 @@ -18564,7 +18567,7 @@ def: "Extend upward from the PCS, branch to provide an arterial feed to the hind synonym: "CCtA" EXACT [] xref: TAO:0005021 is_a: ZFA:0005020 ! central artery -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005022 @@ -18576,7 +18579,7 @@ synonym: "ORA" EXACT [] xref: TAO:0005022 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005023 @@ -18585,7 +18588,7 @@ namespace: zebrafish_anatomy def: "System responsible for generating hematopoietic cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005023 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005024 @@ -18595,7 +18598,7 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th xref: TAO:0005024 is_a: ZFA:0005249 ! vasculature relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005025 @@ -18607,11 +18610,11 @@ synonym: "DLAV" EXACT [] xref: TAO:0005025 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0001285 ! intersegmental vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001073 ! axial vasculature relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005026 @@ -18622,9 +18625,9 @@ synonym: "lateral head vein" EXACT [] synonym: "PHS" EXACT [] xref: TAO:0005026 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005027 @@ -18635,9 +18638,9 @@ synonym: "caudal cerebral vein" EXACT [] synonym: "PCeV" EXACT [] xref: TAO:0005027 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005028 @@ -18654,7 +18657,7 @@ xref: TAO:0005028 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000014 ! dorsal aorta relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0005029 @@ -18666,9 +18669,9 @@ synonym: "RBI" EXACT [] xref: TAO:0005029 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005041 ! anterior lateral plate mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0005030 @@ -18679,9 +18682,9 @@ synonym: "DCV" EXACT [] xref: TAO:0005030 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005031 @@ -18691,9 +18694,9 @@ def: "Vessel that connects to the primitive hindbrain channel and the basilar ar synonym: "DLV" EXACT [] xref: TAO:0005031 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005032 @@ -18703,7 +18706,7 @@ def: "Vein that connects to the hyaloid vein that drains the eye. External to e synonym: "OV" EXACT [] xref: TAO:0005032 is_a: ZFA:0000082 ! vein -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005033 @@ -18713,8 +18716,8 @@ def: "Is an pair of arteries that form from the intersegmental vessels at the le synonym: "vertebral arteries" EXACT PLURAL [] xref: TAO:0005033 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005034 @@ -18726,10 +18729,10 @@ xref: TAO:0005034 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0000477 ! posterior cardinal vein relationship: develops_from ZFA:0001057 ! intersegmental vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005035 @@ -18740,9 +18743,9 @@ synonym: "SIV" EXACT [] synonym: "vitelline vein" EXACT [] xref: TAO:0005035 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005036 @@ -18752,8 +18755,8 @@ def: "A continuation of the anterior mesenteric artery, which branches out from synonym: "SIA" EXACT [] xref: TAO:0005036 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005037 @@ -18773,9 +18776,9 @@ synonym: "" RELATED [] synonym: "supraintestinal veins" EXACT PLURAL [] xref: TAO:0005038 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005039 @@ -18784,9 +18787,9 @@ namespace: zebrafish_anatomy synonym: "ALM" EXACT [] xref: TAO:0005039 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001065 ! lateral mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005040 @@ -18795,9 +18798,9 @@ namespace: zebrafish_anatomy synonym: "PLM" EXACT [] xref: TAO:0005040 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001065 ! lateral mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005041 @@ -18806,9 +18809,9 @@ namespace: zebrafish_anatomy synonym: "ALPM" EXACT [] xref: TAO:0005041 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000121 ! lateral plate mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005042 @@ -18817,9 +18820,9 @@ namespace: zebrafish_anatomy synonym: "PLPM" EXACT [] xref: TAO:0005042 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000121 ! lateral plate mesoderm -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0005043 @@ -18831,7 +18834,7 @@ synonym: "naevus" EXACT [] xref: TAO:0005043 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005044 @@ -18852,7 +18855,7 @@ synonym: "hyaloid arteries" EXACT PLURAL [] xref: TAO:0005045 is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0005046 ! hyaloid vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005046 @@ -18873,7 +18876,7 @@ synonym: "hyaloid veins" EXACT PLURAL [] xref: TAO:0005047 is_a: ZFA:0000082 ! vein relationship: part_of ZFA:0005046 ! hyaloid vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005048 @@ -18883,8 +18886,8 @@ def: "Vessel that branches from cranial division of the internal carotid artery, synonym: "PPrA" EXACT [] xref: TAO:0005048 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005049 @@ -18895,8 +18898,8 @@ synonym: "PrA" EXACT [] xref: TAO:0005049 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005048 ! primitive prosencephalic artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005050 @@ -18906,8 +18909,8 @@ def: "The PLA branches ventrally from the CrDI. It extends rostrally along the synonym: "PLA" EXACT [] xref: TAO:0005050 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005051 @@ -18918,8 +18921,8 @@ synonym: "CMV" EXACT [] synonym: "communicating vessels" EXACT [] xref: TAO:0005051 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005052 @@ -18939,8 +18942,8 @@ def: "Artery that branches off the cranial division of the internal carotid arte synonym: "NCA" EXACT [] xref: TAO:0005053 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005054 @@ -18962,9 +18965,9 @@ def: "Drains the PLA loop proceeds straight caudally along the cranial midline j synonym: "MPLV" EXACT [] xref: TAO:0005055 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005056 @@ -18974,9 +18977,9 @@ def: "Vein that drains the median palatocerebral vein into the optic vein." [GOC synonym: "PLV" EXACT [] xref: TAO:0005056 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005057 @@ -18988,7 +18991,7 @@ xref: TAO:0005057 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005808 ! proepicardial cluster relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005058 @@ -18999,7 +19002,7 @@ xref: TAO:0005058 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0005057 ! epicardium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005059 @@ -19011,7 +19014,7 @@ synonym: "trabecula" RELATED [] xref: TAO:0005059 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005060 @@ -19021,7 +19024,7 @@ xref: TAO:0005060 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005059 ! trabecular layer relationship: part_of ZFA:0005061 ! ventricular myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005061 @@ -19032,7 +19035,7 @@ xref: TAO:0005061 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005062 @@ -19042,7 +19045,7 @@ def: "The outer layer the ventricular myocardium, muscle fibers are arranged in xref: TAO:0005062 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005061 ! ventricular myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005063 @@ -19075,7 +19078,7 @@ synonym: "heart valves" EXACT PLURAL [] xref: TAO:0005065 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005066 @@ -19086,7 +19089,7 @@ synonym: "bulbus arteriosus externa" EXACT [] xref: TAO:0005066 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005067 @@ -19118,7 +19121,7 @@ is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005601 ! sinoatrial ring relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005070 @@ -19132,7 +19135,7 @@ is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005073 ! atrioventricular ring relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005071 @@ -19153,10 +19156,10 @@ namespace: zebrafish_anatomy def: "A portion of endocardial tissue that is part of the atrioventricular ring." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005072 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001320 ! endocardium relationship: part_of ZFA:0005073 ! atrioventricular ring -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005073 @@ -19166,10 +19169,10 @@ def: "A ring of conduction tissue that forms in the atrioventricular canal." [ZF synonym: "AV ring" EXACT [] xref: TAO:0005073 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005074 @@ -19189,7 +19192,7 @@ synonym: "ventricular fast conduction system" EXACT [ZFIN:ZDB-PUB-120927-27] xref: TAO:0005075 is_a: ZFA:0005063 ! cardiac conduction system relationship: part_of ZFA:0000009 ! cardiac ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005076 @@ -19198,9 +19201,9 @@ namespace: zebrafish_anatomy def: "Is a portion of tissue that will develop into vasculature." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005076 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0005077 @@ -19209,7 +19212,7 @@ namespace: zebrafish_anatomy def: "The primordial vasculature that will develop into blood vessels by the process of tubulogenesis. The vascular cord is composed of angioblast or vascular endothelial cells in a solid linear mass called a cord. The cord then undergoes tubulogenesis to form the lumen of the vessels." [ZFIN:ZDB-PUB-040416-1] xref: TAO:0005077 is_a: ZFA:0005076 ! primordial vasculature -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0005078 @@ -19239,8 +19242,8 @@ synonym: "AMA" EXACT [] synonym: "rostral mesenteric artery" EXACT [] xref: TAO:0005080 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005081 @@ -19264,9 +19267,9 @@ synonym: "dorsal branch nasal ciliary arteries" EXACT PLURAL [] xref: TAO:0005082 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005083 @@ -19275,9 +19278,9 @@ namespace: zebrafish_anatomy xref: TAO:0005083 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005084 @@ -19287,8 +19290,8 @@ def: "These arteries branch dorsally from both sides of the posterior communicat synonym: "metencephalic arteries" EXACT PLURAL [] xref: TAO:0005084 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005085 @@ -19298,7 +19301,7 @@ def: "The nasal arteries start at the internal carotid artery and travel rostral synonym: "NA" EXACT [] xref: TAO:0005085 is_a: ZFA:0000005 ! artery -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005086 @@ -19310,7 +19313,7 @@ synonym: "subclavian artery" EXACT [] xref: TAO:0005086 is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0005301 ! pectoral fin blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005087 @@ -19321,7 +19324,7 @@ synonym: "PV" EXACT [] xref: TAO:0005087 is_a: ZFA:0000082 ! vein relationship: part_of ZFA:0005301 ! pectoral fin blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005088 @@ -19332,8 +19335,8 @@ synonym: "caudal mesenteric artery" EXACT [] synonym: "PMA" EXACT [] xref: TAO:0005088 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005089 @@ -19343,7 +19346,7 @@ def: "An elaborate set of vessels that branch off caudally from the anterior mes synonym: "SBA" EXACT [] xref: TAO:0005089 is_a: ZFA:0000005 ! artery -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005090 @@ -19356,7 +19359,7 @@ xref: TAO:0005090 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005035 ! subintestinal vein relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005091 @@ -19378,8 +19381,8 @@ def: "Paired veins that sprout from the dorsal midline junction and dive ventral synonym: "MsV" EXACT [] xref: TAO:0005092 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005093 @@ -19390,7 +19393,7 @@ synonym: "NV" EXACT [] xref: TAO:0005093 is_a: ZFA:0000082 ! vein relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005094 @@ -19404,7 +19407,7 @@ xref: TAO:0005094 is_a: ZFA:0005933 ! mature plexus is_a: ZFA:0007057 ! ocular blood vessel relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005095 @@ -19423,7 +19426,7 @@ def: "Vasculature of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005096 is_a: ZFA:0005095 ! fin vasculature relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005097 @@ -19479,8 +19482,8 @@ namespace: zebrafish_anatomy def: "Stripe of tissue fated to become the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005102 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005103 @@ -19508,7 +19511,7 @@ synonym: "lymph vessels" EXACT PLURAL [] xref: TAO:0005105 is_a: ZFA:0005249 ! vasculature relationship: part_of ZFA:0000385 ! lymphatic system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005106 @@ -19555,7 +19558,7 @@ def: "The thoracic duct is the first perfused lymphatic, located between the dor xref: TAO:0005110 is_a: ZFA:0005296 ! axial lymph vessel relationship: develops_from ZFA:0005605 ! lymphangioblast cord -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005111 @@ -19565,18 +19568,18 @@ def: "Tract that originates in the telencephalon lies medial to the lateral fore synonym: "medial forebrain bundles" EXACT PLURAL [] xref: TAO:0005111 is_a: ZFA:0001682 ! white matter -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005112 name: dorsal lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880] +def: "One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-070907-34] synonym: "dorsal lateral lines" EXACT PLURAL [] xref: TAO:0005112 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005113 @@ -19587,7 +19590,7 @@ synonym: "neuromast dorsal" EXACT [] xref: TAO:0005113 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0005112 ! dorsal lateral line -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005114 @@ -19606,7 +19609,7 @@ synonym: "primary posterior lateral line primordia" EXACT PLURAL [] synonym: "primI" EXACT [] xref: TAO:0005115 is_a: ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005116 @@ -19616,8 +19619,8 @@ def: "Second lateral line primordium. These primordia move at 0.2 somites/hour synonym: "secondary posterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005116 is_a: ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005117 @@ -19627,9 +19630,9 @@ def: "A migrating group of cells originating from an anterior lateral line placo synonym: "anterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005117 is_a: ZFA:0000228 ! lateral line primordium -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005118 @@ -19639,9 +19642,9 @@ def: "A migrating group of cells originating from the middle lateral line placod synonym: "middle lateral line primordia" EXACT PLURAL [] xref: TAO:0005118 is_a: ZFA:0000228 ! lateral line primordium -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005119 @@ -19651,8 +19654,8 @@ def: "A surface structure that will eventually grow to form a barbel. The prim synonym: "barbel primordia" EXACT PLURAL [] xref: TAO:0005119 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0005120 @@ -19670,9 +19673,9 @@ def: "Dorsolateral placode that gives rise to the middle lateral line." [GOC:cvs synonym: "middle lateral line placodes" EXACT PLURAL [] xref: TAO:0005121 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005122 @@ -19681,9 +19684,9 @@ namespace: zebrafish_anatomy def: "Dorsal region of the axial hypoblast." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001378 ! axial hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0005123 @@ -19715,7 +19718,7 @@ synonym: "intestinal villi" EXACT PLURAL [] xref: TAO:0005125 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0005126 @@ -19776,7 +19779,7 @@ id: ZFA:0005132 name: visceral peritoneum namespace: zebrafish_anatomy def: "The part of peritoneum that is a serous membrane covers the external surfaces of most abdominal organs." [GOC:cvs, ORCiD:0000-0002-2244-7917] -synonym: "tunica serosa" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] +synonym: "tunica serosa" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0005132 is_a: ZFA:0005425 ! serous membrane relationship: part_of ZFA:0005120 ! peritoneum @@ -19848,7 +19851,7 @@ def: "Mesenchyme enclosed by dental organ." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005139 is_a: ZFA:0000113 ! head mesenchyme relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005140 @@ -19860,7 +19863,7 @@ synonym: "tooth mesenchyme" EXACT [] xref: TAO:0005140 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005139 ! dental mesenchyme -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005141 @@ -19911,7 +19914,7 @@ synonym: "muscles" EXACT PLURAL [] xref: TAO:0005145 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000548 ! musculature system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005146 @@ -19921,7 +19924,7 @@ def: "An area of medulla oblongata, outside the blood-brain barrier. The apical xref: TAO:0005146 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005147 @@ -19931,7 +19934,7 @@ def: "A portion of tissue that is regrowing after damage or amputation." [GOC:cv synonym: "regenerating tissues" EXACT PLURAL [] xref: TAO:0005147 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005148 @@ -20098,7 +20101,7 @@ def: "Ducts that transport enzymes between organs in the digestive system." [GOC xref: TAO:0005162 is_a: ZFA:0005171 ! duct relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Ceri creation_date: 2009-04-20T04:51:36Z @@ -20111,7 +20114,7 @@ comment: Should be located in rather then part_of when we get the appropriate re xref: TAO:0005163 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:33:42Z @@ -20123,7 +20126,7 @@ def: "Digestive system duct that collects bile from the canaliculus and transpor xref: TAO:0005164 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:39:12Z @@ -20135,7 +20138,7 @@ def: "Digestive system duct that collects bile from the hepatic bile duct and th xref: TAO:0005165 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0001100 ! hepatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:43:23Z @@ -20147,7 +20150,7 @@ def: "Duct that connects the gall bladder and the common bile duct." [GOC:cvs, O xref: TAO:0005166 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:56:39Z @@ -20161,7 +20164,7 @@ synonym: "papilla duodeni major" RELATED [] synonym: "papilla Vateri" EXACT [] xref: TAO:0005167 is_a: ZFA:0005162 ! digestive system duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:59:27Z @@ -20184,7 +20187,7 @@ def: "Duct that collects bile from the bile ductules and connects to the extrahe xref: TAO:0005169 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:19:40Z @@ -20196,7 +20199,7 @@ def: "Bile duct that collects from the intrahepatic ducts and feeds into the com xref: TAO:0005170 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0001100 ! hepatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:26:36Z @@ -20220,7 +20223,7 @@ synonym: "first lobe" EXACT [] xref: TAO:0005172 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2009-04-27T05:51:33Z @@ -20235,7 +20238,7 @@ synonym: "second lobe" EXACT [] xref: TAO:0005173 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T05:59:16Z @@ -20249,7 +20252,7 @@ synonym: "third lobe" EXACT [] xref: TAO:0005174 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2009-04-27T06:04:51Z @@ -20263,7 +20266,7 @@ subset: cell_slim synonym: "primary commissural interneuron" EXACT [] xref: TAO:0005175 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T01:41:54Z @@ -20277,7 +20280,7 @@ subset: cell_slim synonym: "secondary commissural interneuron" EXACT [] xref: TAO:0005176 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:07:49Z @@ -20292,7 +20295,7 @@ synonym: "V2b interneuron" RELATED [] synonym: "ventral longitudinal interneuron" EXACT [] xref: TAO:0005177 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:14:18Z @@ -20306,7 +20309,7 @@ subset: cell_slim synonym: "dorsal longitudinal interneuron" EXACT [] xref: TAO:0005178 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:21:58Z @@ -20320,7 +20323,7 @@ subset: cell_slim synonym: "middle primary motoneuron" EXACT [] xref: TAO:0005179 is_a: ZFA:0009244 ! primary motor neuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:02:28Z @@ -20334,7 +20337,7 @@ subset: cell_slim synonym: "rostral primary motoneuron" EXACT [] xref: TAO:0005180 is_a: ZFA:0009244 ! primary motor neuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:05:40Z @@ -20348,7 +20351,7 @@ subset: cell_slim synonym: "variable primary motoneuron" EXACT [] xref: TAO:0005181 is_a: ZFA:0009244 ! primary motor neuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:38:21Z @@ -20855,7 +20858,7 @@ synonym: "CVC" EXACT [] xref: TAO:0005219 is_a: ZFA:0000099 ! brain vasculature relationship: part_of ZFA:0001443 ! choroid plexus -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2009-07-09T02:58:20Z @@ -20866,8 +20869,8 @@ namespace: zebrafish_anatomy def: "A melanophore stripe that forms the immature pigment pattern." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005220 is_a: ZFA:0001463 ! melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-07-09T03:59:45Z @@ -20888,7 +20891,7 @@ namespace: zebrafish_anatomy def: "A larval melanophore stripe that forms a band, of pigmentation extending from the bases of the eyes on each side of the midline to the top of the tail, that underlies the myotomes bilaterally, still is dorsal to the yolk." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005222 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2009-07-09T04:05:57Z @@ -20899,7 +20902,7 @@ namespace: zebrafish_anatomy def: "The larval melanophore stripe that is at the level of the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005223 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2009-07-09T04:29:18Z @@ -20910,7 +20913,7 @@ namespace: zebrafish_anatomy def: "The larval melanophore stripe that forms a band over the ventral surface of the yolk sac." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005224 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-07-09T04:30:34Z @@ -20944,9 +20947,9 @@ synonym: "proto neuromast" RELATED [] synonym: "proto-neuromast" RELATED [] xref: TAO:0005227 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2009-07-09T04:49:53Z @@ -20959,7 +20962,7 @@ synonym: "choroid" EXACT [ISBN:1402070861] xref: TAO:0005229 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-14T02:05:16Z @@ -20996,7 +20999,7 @@ synonym: "larval VeLD" RELATED [] synonym: "multipolar commissural descending interneuron" EXACT [] xref: TAO:0005232 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:46:32Z @@ -21011,7 +21014,7 @@ synonym: "commissural descending interneurons" EXACT [ZFIN:ZDB-PUB-081114-2] synonym: "V2a interneuron" RELATED [] xref: TAO:0005233 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:55:01Z @@ -21024,7 +21027,7 @@ subset: cell_slim synonym: "commissural longitudinal ascending interneuron" EXACT [] xref: TAO:0005234 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:14:51Z @@ -21037,7 +21040,7 @@ subset: cell_slim synonym: "unipolar commissural descending interneuron" RELATED [] xref: TAO:0005235 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:26:07Z @@ -21054,7 +21057,7 @@ synonym: "prorubricyte" EXACT [ZFIN:ZDB-PUB-070221-1] xref: CL:0000549 xref: TAO:0005236 is_a: ZFA:0005237 ! erythroblast -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-08-10T05:29:27Z @@ -21097,7 +21100,7 @@ xref: CL:0007022 xref: TAO:0005239 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2009-08-10T06:26:10Z @@ -21175,7 +21178,7 @@ synonym: "auditory support cell" EXACT [] xref: CL:0005014 xref: TAO:0005244 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:41:03Z @@ -21190,8 +21193,8 @@ xref: CL:0005002 xref: TAO:0002148 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:53:40Z @@ -21219,7 +21222,7 @@ synonym: "circumferential ascending interneuron" EXACT [] synonym: "V1 interneuron" RELATED [] xref: TAO:0005247 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-08-21T04:22:15Z @@ -21233,7 +21236,7 @@ xref: TAO:0005248 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005027 ! posterior cerebral vein relationship: part_of ZFA:0005219 ! choroid plexus vascular circuit -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2009-11-02T04:07:52Z @@ -21246,7 +21249,7 @@ xref: TAO:0001079 xref: TAO:0005249 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-11-10T02:31:54Z @@ -21270,7 +21273,7 @@ synonym: "vasculature" RELATED [] xref: TAO:0005251 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:16:24Z @@ -21294,7 +21297,7 @@ synonym: "parietal epithelial layer" EXACT [] xref: TAO:0005253 is_a: ZFA:0001498 ! simple squamous epithelium relationship: part_of ZFA:0005254 ! renal glomerular capsule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2009-11-11T01:39:19Z @@ -21307,7 +21310,7 @@ synonym: "Bowman's capsule " EXACT [] xref: TAO:0005254 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2009-11-11T01:45:02Z @@ -21330,7 +21333,7 @@ synonym: "intestinal crypt" RELATED [ZFIN:ZDB-PUB-090217-11] xref: TAO:0005256 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-07T12:26:13Z @@ -21500,9 +21503,9 @@ synonym: "juvenile ovary" EXACT [ZFIN:ZDB-PUB-070305-2] xref: TAO:0005272 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001262 ! gonad primordium -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2009-12-09T11:35:20Z @@ -21597,7 +21600,7 @@ synonym: "Malpighian corpuscle" EXACT [] xref: TAO:0005281 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0005282 ! nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T01:11:46Z @@ -21609,7 +21612,7 @@ def: "Functional unit of the kidney that filters waste." [GOC:cvs, ORCiD:0000-00 xref: TAO:0002153 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T02:47:46Z @@ -21624,7 +21627,7 @@ synonym: "urinary space" EXACT [] xref: TAO:0005283 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T02:51:01Z @@ -21638,7 +21641,7 @@ is_a: ZFA:0005250 ! capillary relationship: part_of ZFA:0001288 ! renal glomerulus relationship: part_of ZFA:0005305 ! kidney vasculature relationship: part_of ZFA:0005590 ! capillary loop nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:00:45Z @@ -21651,7 +21654,7 @@ synonym: "glomerular filtration membrane" EXACT [] xref: TAO:0005285 is_a: ZFA:0001485 ! basal lamina relationship: part_of ZFA:0001288 ! renal glomerulus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:26:30Z @@ -21663,7 +21666,7 @@ def: "Middle layer of the glomerular basement membrane." [GOC:cvs, ORCiD:0000-00 xref: TAO:0005286 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:52:52Z @@ -21675,7 +21678,7 @@ def: "Layer of the glomerular basement membrane adjacent to the glomerular capil xref: TAO:0005287 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:56:00Z @@ -21687,7 +21690,7 @@ def: "Layer of the glomerular basement membrane adjacent to the podocytes and ca xref: TAO:0005288 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:56:32Z @@ -21699,7 +21702,7 @@ def: "Tubes in the kidney that collect and transport urine." [GOC:cvs, ORCiD:000 xref: TAO:0005289 is_a: ZFA:0005171 ! duct relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T04:36:59Z @@ -21874,7 +21877,7 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th xref: TAO:0005305 is_a: ZFA:0005249 ! vasculature relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-20T03:02:06Z @@ -21886,7 +21889,7 @@ def: "Blood vessel part of kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005306 is_a: ZFA:0005314 ! blood vessel relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-20T03:02:27Z @@ -21899,7 +21902,7 @@ xref: TAO:0002139 is_a: ZFA:0005255 ! arteriole relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T03:02:56Z @@ -21912,7 +21915,7 @@ xref: TAO:0002140 is_a: ZFA:0005255 ! arteriole relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T03:05:49Z @@ -21923,7 +21926,7 @@ namespace: zebrafish_anatomy def: "Capillary that is part of the pronephric glomerulus. Glomerular capillary endothelial membranes in zebrafish normally have a fenestrated morphology that is visible at the ultrastructural level." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-000824-1] xref: TAO:0005309 is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus created_by: Ceri creation_date: 2010-01-29T11:29:44Z @@ -21936,9 +21939,9 @@ def: "Portion of tissue that encapsulates the glomerulus of the pronephros." [GO synonym: "Bowman's capsule " EXACT [] xref: TAO:0005310 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:39:01Z @@ -21950,7 +21953,7 @@ def: "Simple squamous epithelium that lines the capsule of the pronephric glomer synonym: "pronephric parietal epithelial layer" EXACT [] xref: TAO:0005311 is_a: ZFA:0001498 ! simple squamous epithelium -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0005310 ! pronephric glomerular capsule created_by: Ceri creation_date: 2010-01-29T11:40:01Z @@ -21965,9 +21968,9 @@ synonym: "inter-glomerular space" EXACT [] synonym: "urinary space" EXACT [] xref: TAO:0005312 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:41:05Z @@ -21979,7 +21982,7 @@ def: "Membrane between the pronephric podocytes and the pronephric glomerular ca synonym: "pronephric glomerular filtration membrane" EXACT [] xref: TAO:0005313 is_a: ZFA:0001485 ! basal lamina -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus created_by: Ceri creation_date: 2010-01-29T11:59:03Z @@ -22014,9 +22017,9 @@ synonym: "fin membrane pectoral fin bud" RELATED [] xref: TAO:0005316 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000085 ! apical ectodermal ridge pectoral fin bud -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-02-10T02:37:39Z @@ -22030,7 +22033,7 @@ xref: TAO:0005317 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005316 ! fin fold pectoral fin bud relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-02-10T03:27:29Z @@ -22052,7 +22055,7 @@ def: "Lymph vessel that is located between the somites." [GOC:cvs, ORCiD:0000-00 synonym: "islv" EXACT [] xref: TAO:0005319 is_a: ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:28:00Z @@ -22063,7 +22066,7 @@ namespace: zebrafish_anatomy synonym: "dllv" EXACT [] xref: TAO:0005320 is_a: ZFA:0005296 ! axial lymph vessel -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:29:42Z @@ -22090,7 +22093,7 @@ xref: TAO:0005322 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009374 ! kidney epithelial cell relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-02-10T06:32:34Z @@ -22169,8 +22172,8 @@ xref: CL:0005001 xref: TAO:0005328 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -22184,8 +22187,8 @@ xref: CL:0005003 xref: TAO:0005329 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -22199,8 +22202,8 @@ xref: CL:0005004 xref: TAO:0005331 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -22214,8 +22217,8 @@ xref: CL:0005005 xref: TAO:0005332 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -22249,8 +22252,8 @@ def: "Embryonic structure that forms from the anterior gut epithelium at the lev xref: TAO:0005335 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0005336 ! presumptive swim bladder -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2010-03-18T03:59:33Z @@ -22263,9 +22266,9 @@ synonym: "swim bladder anlage" RELATED [ZFIN:ZDB-PUB-100202-11] xref: TAO:0005336 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-03-18T04:20:42Z @@ -22277,8 +22280,8 @@ def: "Portion of tissue that forms from the swim bladder epithelium at the anter xref: TAO:0002145 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000076 ! swim bladder -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-03-18T04:28:20Z @@ -22292,7 +22295,7 @@ synonym: "recessus posterior " EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0005338 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T05:40:53Z @@ -22368,7 +22371,7 @@ def: "Connective tissue in which fat is stored. All adipose tissue in the zebraf synonym: "white adipose tissue" EXACT [] xref: TAO:0002134 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-19T10:04:38Z @@ -22380,7 +22383,7 @@ def: "Portion of the pancreatic duct, external to the pancreas body that connect xref: TAO:0005346 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2010-03-19T03:17:51Z @@ -22813,7 +22816,7 @@ def: "Anatomical space that is an opening in a bone, usually for passage of bloo synonym: "foramina" EXACT PLURAL [] xref: TAO:0001736 is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:01:27Z @@ -22834,7 +22837,7 @@ namespace: zebrafish_anatomy def: "Anatomical space that is a concavity, shallow depression, or groove on a bone." [TAO:curator] xref: TAO:0001743 is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:04:59Z @@ -22845,7 +22848,7 @@ namespace: zebrafish_anatomy def: "Anatomical space that is the external opening of a gill slit connecting the pharyngeal cavity to the exterior. Gill opening is usually paired and located on the lateral or ventral surfaces of the head." [TAO:curator] xref: TAO:0002057 is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:06:34Z @@ -22878,7 +22881,7 @@ def: "Sensory canal associated with the infraorbital bones. Located in close pro xref: TAO:0001811 is_a: ZFA:0005443 ! sensory canal relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2010-04-23T01:44:27Z @@ -22924,7 +22927,7 @@ def: "Sensory canal contained in the nasal and frontal bones. It contains 4 or xref: TAO:0001810 is_a: ZFA:0005443 ! sensory canal relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2010-04-23T02:00:48Z @@ -23039,7 +23042,7 @@ namespace: zebrafish_anatomy def: "Barbel that is associated with the anterior nostril. Anterior nasal barbel is paired." [TAO:curator] xref: TAO:0001937 is_a: ZFA:0000622 ! barbel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T05:12:00Z @@ -23096,7 +23099,7 @@ def: "Duct that crosses the midline connecting the sacculi." [GOC:cvs, GOC:ymb, xref: TAO:0005412 is_a: ZFA:0005171 ! duct relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: ceri creation_date: 2010-05-17T03:08:14Z @@ -23191,7 +23194,7 @@ namespace: zebrafish_anatomy def: "Joint that articulates the autopalatine cartilage or bone and maxilla." [TAO:curator] xref: TAO:0001942 is_a: ZFA:0001596 ! joint -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2010-05-25T05:32:51Z @@ -23234,7 +23237,7 @@ namespace: zebrafish_anatomy def: "A multi-tissue structure that is comprised of a secretory epithelial layer and a connective tissue layer." [http://en.wikipedia.org/wiki/Serous_membrane] xref: TAO:0005425 is_a: ZFA:0001488 ! multi-tissue structure -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-05-26T10:36:36Z @@ -23316,7 +23319,7 @@ namespace: zebrafish_anatomy def: "Barbel that originates on the chin." [TAO:curator] xref: TAO:0002024 is_a: ZFA:0000622 ! barbel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T05:43:41Z @@ -23327,7 +23330,7 @@ namespace: zebrafish_anatomy def: "Acellular anatomical structure that is a natural outgrowth, prominence, or point that is part of the surface of a tooth." [TAO:curator] xref: TAO:0001973 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-05-26T06:11:37Z @@ -23339,7 +23342,7 @@ def: "Skeletal element which is a slender, horny, flexible, unsegmented fibril w synonym: "actinotrichia" EXACT PLURAL [] xref: TAO:0000089 is_a: ZFA:0005494 ! skeletal element -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-06-08T04:31:42Z @@ -23377,8 +23380,8 @@ name: pectoral fin motor nerve 1 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:22:40Z @@ -23388,8 +23391,8 @@ name: pectoral fin motor nerve 2 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:27:40Z @@ -23399,8 +23402,8 @@ name: pectoral fin motor nerve 3 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and 2 and rostral of nerve 4 and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:28:55Z @@ -23473,7 +23476,7 @@ def: "Sensory canal associated with the preopercle bone. It lies in close proxim xref: TAO:0001813 is_a: ZFA:0005443 ! sensory canal relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2010-06-25T10:58:48Z @@ -23484,7 +23487,7 @@ namespace: zebrafish_anatomy def: "An anatomical space that is an opening, usually at the end of a canal or duct, on the surface of the integument or the lining of an internal anatomical space." [TAO:curator] xref: TAO:0001791 is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-28T11:08:35Z @@ -23494,8 +23497,8 @@ name: pectoral fin motor nerve 4 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the ventral side of the fin and innervates the ventral side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-28T01:47:43Z @@ -23507,7 +23510,7 @@ def: "Sensory canal associated with the angular and dentary bones. Located ante xref: TAO:0001814 is_a: ZFA:0005443 ! sensory canal relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2010-06-25T12:27:58Z @@ -23520,7 +23523,7 @@ synonym: "TPC" RELATED [ZFIN:ZDB-PUB-961014-1268] synonym: "tract of the posterior commissure" EXACT [ZFIN:ZDB-PUB-961014-421] is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000320 ! caudal commissure -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-07-21T01:49:43Z @@ -23591,7 +23594,7 @@ namespace: zebrafish_anatomy def: "Space that contains perilymph." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:03:28Z @@ -23628,9 +23631,9 @@ name: oral ectoderm namespace: zebrafish_anatomy def: "Ectoderm of the oral region." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0000016 ! ectoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-07-21T03:22:11Z @@ -23899,9 +23902,9 @@ name: endocardial precursor namespace: zebrafish_anatomy def: "Is a portion of tissue part of the heart primordium which will give rise to the endocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:50:10Z @@ -23911,9 +23914,9 @@ name: myocardial precursor namespace: zebrafish_anatomy def: "Portion of tissue that will develop into the myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:53:48Z @@ -23926,7 +23929,7 @@ synonym: "optic fissure" RELATED [] is_a: ZFA:0001690 ! groove relationship: develops_from ZFA:0001284 ! optic fissure relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2010-07-21T03:00:49Z @@ -23959,7 +23962,7 @@ namespace: zebrafish_anatomy def: "Surface structure that is a portion of skin that projects or hangs from the body." [TAO:curator] xref: TAO:0001951 is_a: ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:21:23Z @@ -23971,7 +23974,7 @@ def: "Surface structure that is the region of the head in front of and between t xref: TAO:0001712 is_a: ZFA:0001308 ! organism subdivision relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:22:07Z @@ -24004,7 +24007,7 @@ synonym: "circuli" EXACT PLURAL [] xref: TAO:0002051 is_a: ZFA:0000037 ! anatomical structure relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:33:11Z @@ -24354,7 +24357,7 @@ namespace: zebrafish_anatomy def: "Scale that is associated with the lateral line sensory canal." [TAO:curator] xref: TAO:0001824 is_a: ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:49:27Z @@ -24417,7 +24420,7 @@ def: "Anatomical space between bones of the neurocranium. Frequently closes dur xref: TAO:0001738 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:27:16Z @@ -24641,7 +24644,7 @@ namespace: zebrafish_anatomy def: "Anatomical space that is the concavity containing the eye." [TAO:curator] xref: TAO:0001967 is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:17:20Z @@ -24652,9 +24655,9 @@ namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "angiogenic sprout" RELATED [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-09-23T05:54:14Z @@ -24689,7 +24692,7 @@ def: "Acellular anatomical structure that is the innermost layer of the optic ch synonym: "vitreous lamina" EXACT [] is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-10T02:16:43Z @@ -24701,7 +24704,7 @@ def: "Multi-tissue structure that composes the opaque fibrous outer layer of the xref: TAO:0002289 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-11-11T10:53:23Z @@ -24764,7 +24767,7 @@ namespace: zebrafish_anatomy def: "Portion of the iris which contains bundles of fibers, most of which are oriented radially around the pupil. The stroma is innervated by the iris blood vessels and develops from the periocular mesenchyme." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-12-01T02:28:06Z @@ -24775,7 +24778,7 @@ namespace: zebrafish_anatomy def: "The line where the cornea and the sclera meet." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090309-8] is_a: ZFA:0001689 ! anatomical line relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-12T03:45:32Z @@ -24786,7 +24789,7 @@ namespace: zebrafish_anatomy def: "Duct present in the angle where the cornea meets the ciliary zone that absorbs the aqueous humor." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0005171 ! duct relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-11-12T03:51:50Z @@ -24796,8 +24799,8 @@ name: periocular mesenchyme namespace: zebrafish_anatomy def: "Head mesenchyme surrounding the immature eye that gives rise to specialized structures of the anterior segment of the eye." [ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-12-02T12:29:18Z @@ -24820,7 +24823,7 @@ namespace: zebrafish_anatomy def: "The lens capsule is a modified basement membrane that completely surrounds the ocular lens." [GOC:cvs, ORCiD:0000-0002-2244-7917, PMID:18773892] is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-12-03T11:36:36Z @@ -24832,7 +24835,7 @@ def: "Portion of tissue that are compact accumulations of neurons having roughly synonym: "brain nuclei" EXACT PLURAL [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-01-28T05:31:14Z @@ -24883,9 +24886,9 @@ namespace: zebrafish_anatomy def: "Rostral portion of pars anterior of the adenohypophysis where corticotropes and lactotropes localize." [ZFIN:ZDB-PUB-080616-4] synonym: "rostral pars distalis" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001195 ! pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2011-04-13T11:44:33Z @@ -24896,9 +24899,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of pars anterior of the adenohypophysis where somatotropes, thyrotropes and gonadotropes are localized. The proximal pars anterior has functional homology to the mammalian pars tuberalis, secreting the same hormones." [ZFIN:ZDB-PUB-080616-4] synonym: " proximal pars distalis" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001195 ! pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2011-04-13T02:37:52Z @@ -24959,7 +24962,7 @@ namespace: zebrafish_anatomy def: "Cluster of cells comprising a portion of tissue which gives rise to new mesonephric nephrons. The cluster contains self-renewing stem cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-110131-33] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2011-04-26T04:26:56Z @@ -25023,7 +25026,7 @@ namespace: zebrafish_anatomy def: "An anatomical structure that is regional part of the central nervous system where there is a significant bend of the axis." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0000037 ! anatomical structure relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-05-02T01:03:43Z @@ -25034,8 +25037,8 @@ namespace: zebrafish_anatomy def: "Non-material anatomical entity of two dimensions, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures." [CARO:MAH, ORCiD:0000-0001-9114-8737] xref: CARO:0000010 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ZFIN creation_date: 2011-03-22T10:34:12Z @@ -25059,7 +25062,7 @@ def: "Fin that is one of a pair located ventrally on the organism." [TAO:curator xref: TAO:0002278 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0001383 ! fin bud -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-11-11T11:22:21Z @@ -25071,7 +25074,7 @@ def: "Fin that is an unpaired fin located in the sagittal plane of the organism. xref: TAO:0002276 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0000040 ! median fin fold -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-11T11:33:02Z @@ -25108,10 +25111,10 @@ name: sinoatrial region namespace: zebrafish_anatomy def: "Region at venious pole of heart tube that initiates heart beat." [ZFIN:ZDB-PUB-101115-23] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-22T04:14:44Z @@ -25122,9 +25125,9 @@ namespace: zebrafish_anatomy def: "Ring of cardiac conduction tissue around the sinoatrial region of the heart tube that performs pacemaker function." [ZFIN:ZDB-PUB-101115-23] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005600 ! sinoatrial region -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2011-11-22T04:16:19Z @@ -25143,7 +25146,7 @@ name: lymphangiogenic sprout namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new lymph vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100719-62] is_a: ZFA:0005559 ! vascular sprouts -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-12-27T12:39:43Z @@ -25153,7 +25156,7 @@ name: angiogenic sprout namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new blood vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005559 ! vascular sprouts -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-12-27T12:41:09Z @@ -25165,7 +25168,7 @@ def: "The primordial vasculature that will develop into lymph vessels. The lymp synonym: "parachordal lymphangioblast string" EXACT [ZFIN:ZDB-PUB-110613-5] is_a: ZFA:0005076 ! primordial vasculature relationship: develops_from ZFA:0000477 ! posterior cardinal vein -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2011-12-27T12:45:30Z @@ -25371,8 +25374,8 @@ def: "Space enclosed by the trabeculae cranii. The anterior tip of the notochor synonym: "hypophyseal fenestrae" EXACT PLURAL [] xref: TAO:0005269 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2012-03-15T03:52:38Z @@ -25623,9 +25626,9 @@ name: primitive pectoral fin adductor namespace: zebrafish_anatomy def: "Adductor that originates at the cleithrum the muscle fibers run in sheets along the endoskeletal disk extending dorsally and caudally from its base. Distally, the muscles insert onto the fin membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050920-7] is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2012-05-08T03:51:06Z @@ -25635,7 +25638,7 @@ name: primitive pectoral fin abductor namespace: zebrafish_anatomy def: "Abductor that originates at the cleithrum the muscle fibers run in sheets along the endoskeletal disk extending dorsally and caudally from its base. Distally, the muscles insert onto the fin membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050920-7] is_a: ZFA:0005269 ! abductor muscle -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2012-05-08T03:59:41Z @@ -25677,7 +25680,7 @@ namespace: zebrafish_anatomy def: "Endochondral process of the autopalatine that forms the socket of the autopalatine-preethmoid joint." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001637 ! bony projection relationship: part_of ZFA:0000620 ! autopalatine -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2012-09-25T03:42:27Z @@ -25738,7 +25741,7 @@ def: "Multi-tissue structure part of the olfactory bulb that is roughly sphero is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005668 ! olfactory bulb protoglomerulus relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-03-19T02:15:11Z @@ -25807,9 +25810,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the olfactory bulb comprised of ciliated and microvillous olfactory sensory neurons projections that form specialized neuropilar regions comprised of olfactory sensor axons and the dendrites of olfactory bulb neurons." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120330-2] synonym: "glomerular precursors" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T11:55:43Z @@ -25851,7 +25854,7 @@ namespace: zebrafish_anatomy def: "Single large glomerulus located in the ventral posterior region of the maturing glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "VPG" RELATED [] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:17:00Z @@ -25862,7 +25865,7 @@ namespace: zebrafish_anatomy def: "Central region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:25:20Z @@ -25873,7 +25876,7 @@ namespace: zebrafish_anatomy def: "Dorsal region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:26:28Z @@ -25884,7 +25887,7 @@ namespace: zebrafish_anatomy def: "Lateral region of the glomerular layer of the olfactory bulb. The lateral region of the olfactory bulb consisted of morphologically diverse glomeruli and a diffuse aggregate of OSN axons, the lateral plexus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:27:13Z @@ -25895,7 +25898,7 @@ namespace: zebrafish_anatomy def: "Medial region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:28:47Z @@ -25906,7 +25909,7 @@ namespace: zebrafish_anatomy def: "Ventral region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:29:39Z @@ -26359,7 +26362,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Dorsolateral protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG1" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T03:52:20Z @@ -26370,7 +26373,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Ventromedial protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG2" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:06:52Z @@ -26381,7 +26384,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Dorsomedial protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG3" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:08:18Z @@ -26392,7 +26395,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Ventrolateral protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG4" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:08:37Z @@ -26403,7 +26406,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Most lateral protoglomerulus in the central zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ1" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:13:36Z @@ -26414,7 +26417,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 1." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ2" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:20:35Z @@ -26425,7 +26428,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 2." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ3" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:21:01Z @@ -26436,7 +26439,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 3." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ4" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:35:43Z @@ -26447,7 +26450,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Most medial protoglomerulus in the central zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ5" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:36:02Z @@ -26458,7 +26461,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most posterio-lateral of the medial protoglomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG1 " RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:39:34Z @@ -26469,7 +26472,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most dorsally located medial protoglomerulus and medial to protoglomerulus 1." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG2" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:18Z @@ -26480,7 +26483,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Located between medial glomerulus 2 and medial glomerulus 4 along dorsal-ventral axis of the medial region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG3" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:38Z @@ -26491,7 +26494,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most ventral of the medial protoglomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG4" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:57Z @@ -26565,7 +26568,7 @@ namespace: zebrafish_anatomy def: "Anatomical space, part of the lacunocanalicular system that connects lacuna within bone tissue allowing osteocyte projections to connect." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-11518-14] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T12:10:17Z @@ -26576,7 +26579,7 @@ namespace: zebrafish_anatomy def: "Anatomical space a small cavity, in the matrix of bone tissue. Part of the lacunocanalicular system." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T12:19:22Z @@ -26589,8 +26592,8 @@ synonym: "endodermal rod" RELATED [ZFIN:ZDB-PUB-030115-26] synonym: "intestinal anlage" RELATED [ZFIN:ZDB-PUB-050120-6.] is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Ceri creation_date: 2013-07-23T03:03:23Z @@ -26601,8 +26604,8 @@ namespace: zebrafish_anatomy def: "Portion of the intestinal rod that loops to left between 26-30hpf and gives rise to the intestinal bulb and liver and anterior pancreatic primordium. The endoderm at this stage is a compact mass of cells with little to no polarization." [ZFIN:ZDB-PUB-031103-19] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-07-23T03:06:11Z @@ -26615,7 +26618,7 @@ subset: cell_slim xref: CL:0002064 is_a: ZFA:0009277 ! acinar cell relationship: part_of ZFA:0005741 ! pancreatic acinar gland -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:13:45Z @@ -26629,7 +26632,7 @@ synonym: "CAC" EXACT [ZFIN:ZDB-PUB-050623-3] xref: CL:0002080 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: part_of ZFA:0005741 ! pancreatic acinar gland -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:16:32Z @@ -26642,7 +26645,7 @@ synonym: "exocrine glands pancreas" EXACT [] synonym: "pancreatic acini" EXACT [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:42:33Z @@ -26687,9 +26690,9 @@ subset: cell_slim synonym: "notochord sheath cell" RELATED [] xref: CL:0007007 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2013-07-30T04:09:49Z @@ -26701,7 +26704,7 @@ def: "A cell whose primary function is to provide structural support, to provide subset: cell_slim xref: CL:0000293 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-30T04:14:44Z @@ -26713,9 +26716,9 @@ def: "Structural cell of notochord that contain one large fluid-filled intracell subset: cell_slim synonym: "chordocytes" EXACT [] is_a: ZFA:0005745 ! structural cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2013-07-30T04:15:56Z @@ -26727,7 +26730,7 @@ def: "Lymph vessels that are located on either side of the PCV in the posterior synonym: "SIL" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005840 ! intestinal lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2013-07-31T10:44:16Z @@ -26739,7 +26742,7 @@ def: "Digestive duct within the pancreas. The pancreatic duct carries inactive is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0000140 ! pancreas relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-08-01T02:17:49Z @@ -26749,7 +26752,7 @@ name: intercalated duct pancreas namespace: zebrafish_anatomy def: "The portion of the intrapancreatic duct leading from the pancreatic acinar gland to the intralobular duct." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:44:27Z @@ -26760,7 +26763,7 @@ namespace: zebrafish_anatomy def: "Intrapancreatic duct within a pancreatic lobe that connects all the intercalated duct with an interlobular duct. The intralobular duct is lined with cuboidal cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0005748 ! intrapancreatic duct relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:50:38Z @@ -26779,7 +26782,7 @@ name: main intrapancreatic duct namespace: zebrafish_anatomy def: "Intrapancreatic duct that connects to the interlobular ducts and drains into the extrapancreatic duct. The main duct may not be present in all larva and may develop in a segmented fashion." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3, ZFIN:ZDB-PUB-070310-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:55:07Z @@ -26812,7 +26815,7 @@ namespace: zebrafish_anatomy def: "Portion of tissue composed of a group of cells in the pancreas producing insulin, glucagon and somatostatin. Part of the endocrine pancreas." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001260 ! endocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T04:10:28Z @@ -26823,7 +26826,7 @@ namespace: zebrafish_anatomy def: "Islets that develop after the primary islet. The secondary islets usually form around 7 dpf but can be induced to form as early as 5 dpf." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130710-45, ZFIN:ZDB-PUB-140817-2] comment: Start stage known to be after 3dpf. is_a: ZFA:0005755 ! islet -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2013-08-01T04:10:55Z @@ -26835,9 +26838,9 @@ def: "Portion of tissue composed of the signal-generating cells within the zona synonym: "MDO" EXACT [] synonym: "mid-diencephalic organizer" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001344 ! zona limitans intrathalamica -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-08-02T03:20:09Z @@ -26849,7 +26852,7 @@ def: "Adipose tissue interspersed within the pancreatic acini." [GOC:cvs, ORCiD: comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2013-09-23T10:03:51Z @@ -26862,7 +26865,7 @@ comment: No evidence of septa surrounding fat has been presented so is a fat acc synonym: "visceral fat deposit" RELATED [] is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2013-09-23T10:23:07Z @@ -26874,7 +26877,7 @@ def: "Adipose tissue in the cranium. Cranial adipocytes are located within the v comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T10:26:44Z @@ -26895,7 +26898,7 @@ name: subcutaneous fat namespace: zebrafish_anatomy def: "Adipose tissue between muscle and integument." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111012-7] is_a: ZFA:0005345 ! adipose tissue -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T11:20:54Z @@ -26906,7 +26909,7 @@ namespace: zebrafish_anatomy def: "Adipose tissue surrounding the esophagus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:32:46Z @@ -26918,7 +26921,7 @@ def: "Adipose tissue deposited along the mandible." [GOC:cvs, ORCiD:0000-0002-22 synonym: "jaw fat deposit" EXACT [] is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:33:07Z @@ -26930,7 +26933,7 @@ def: "Adipose tissue surrounding the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917 synonym: "pericardial fat deposit" EXACT [] is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0000054 ! pericardium -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:41:21Z @@ -26942,7 +26945,7 @@ def: "Adipose tissue that forms at the base of the pectoral fin." [GOC:cvs, ORCi synonym: "pectoral fin plate deposit" EXACT [] is_a: ZFA:0005762 ! subcutaneous fat relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:42:40Z @@ -26954,7 +26957,7 @@ def: "Subcutaneous adipose tissue deposit at the base of the caudal fin." [GOC:c synonym: "tail fin fat" EXACT [] is_a: ZFA:0005762 ! subcutaneous fat relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T12:46:21Z @@ -26963,6 +26966,7 @@ id: ZFA:0005768 name: trigeminal sensory neuron namespace: zebrafish_anatomy def: "Sensory neuron that extends a single axon shaft along the lateral white matter of the hindbrain and spinal cord. Numerous medially projecting branches are later formed and innervate a series of target nuclei along the anteroposterior axis of the hindbrain and spinal cord. The highly branched axons innervate the integument of the head. There are several subtypes with different afferent branching morphologies." [ZFIN:ZDB-PUB-120106-15] +subset: cell_slim is_a: ZFA:0009053 ! sensory neuron created_by: Ceri creation_date: 2013-09-30T03:31:51Z @@ -26977,7 +26981,7 @@ xref: CL:0000018 is_a: ZFA:0009016 ! germ line cell relationship: develops_from ZFA:0009005 ! spermatocyte relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2013-10-04T03:51:27Z @@ -26986,8 +26990,9 @@ id: ZFA:0005770 name: crypt neuron olfactory support cell namespace: zebrafish_anatomy def: "Specialized olfactory support cell that surrounds crypt olfactory sensory neurons. There are one or two support cells for each crypt neuron. The cytoplasm of crypt neuron olfactory support cells is less electron dense then other support cells. They also bear numerous microvilli at their apical rim. When two supporting cells are present, they interdigitate with each other Mitochondria in crypt supporting cells are larger than those in the common supporting cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060724-7] +subset: cell_slim is_a: ZFA:0000688 ! olfactory support cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-11-05T11:05:25Z @@ -26998,8 +27003,8 @@ namespace: zebrafish_anatomy def: "Portion of tissue that develops from the cranial neural crest and which cells populate a series of pharyngeal arches from which develops the support skeleton of the jaw and gills." [ZFIN:ZDB-PUB-110609-14, ZFIN:ZDB-PUB-120517-11] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007087 ! migratory cranial neural crest -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Ceri creation_date: 2013-11-25T12:11:28Z @@ -27011,7 +27016,7 @@ def: "Diploid cell produced by the fusion of sperm cell nucleus and egg cell." [ synonym: "zygote " EXACT [] xref: CL:00000365 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000001 ! zygote:1-cell created_by: Ceri creation_date: 2013-11-25T01:46:49Z @@ -27020,10 +27025,11 @@ id: ZFA:0005773 name: embryonic blood vessel endothelial progenitor cell namespace: zebrafish_anatomy def: "An endothelial progenitor cell that participates in angiogenesis during development." [GOC:tjm] +subset: cell_slim xref: CL:0002546 is_a: ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2013-12-02T02:57:49Z @@ -27034,7 +27040,7 @@ namespace: zebrafish_anatomy def: "The external layer of the atrium bounding the atrial myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100112-31] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005057 ! epicardium -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2013-11-26T04:32:55Z @@ -27043,6 +27049,7 @@ id: ZFA:0005775 name: enteric neuron namespace: zebrafish_anatomy def: "Neuron that is part of the enteric nervous system." [CL:MAH] +subset: cell_slim xref: CL:0007011 is_a: ZFA:0009059 ! autonomic neuron relationship: part_of ZFA:0001155 ! enteric nervous system @@ -27054,6 +27061,7 @@ id: ZFA:0005776 name: parasympathetic neuron namespace: zebrafish_anatomy def: "Parasympathetic neurons are part of the parasympathetic nervous system and the cell bodies lie in the brain and sacral region of the spinal cord. The neurons are mainly cholinergic." [ISBN:0080923437] +subset: cell_slim xref: CL:0011102 is_a: ZFA:0009059 ! autonomic neuron relationship: part_of ZFA:0001575 ! parasympathetic nervous system @@ -27065,6 +27073,7 @@ id: ZFA:0005777 name: sympathetic neuron namespace: zebrafish_anatomy def: "Sympathetic neurons are part of the sympathetic nervous system and are primarily adrenergic producing the neurotransmitter noradrenalin along with other neuropeptides." [ISBN:0080923437] +subset: cell_slim xref: CL:0011103 is_a: ZFA:0009059 ! autonomic neuron relationship: part_of ZFA:0001576 ! sympathetic nervous system @@ -27076,6 +27085,7 @@ id: ZFA:0005778 name: hypocretin-secreting neuron namespace: zebrafish_anatomy def: "A neuron that releases hypocretin as a neurotransmitter." [PMID:23848055] +subset: cell_slim synonym: "orexin secreting neuron " RELATED [] xref: CL:0011109 is_a: ZFA:0009248 ! neuron @@ -27089,7 +27099,7 @@ namespace: zebrafish_anatomy def: "Epithelium within the thymus where lymphocytes mature. Cells of the thymic epithelium have cytoplasm that appear devoid of most membrane bound organelles but contain bundles of cytoplasmic filaments, and frequent desmosomes occur between these epithelial cells. There are also secretory epithelial cells that contain a heterogeneous population of electron-dense, cytoplasmic granules and a well developed Golgi complex. Epithelial cysts are present after 3 weeks." [ZFIN:ZDB-PUB-990414-60] is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0001078 ! thymus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-03-11T03:25:06Z @@ -27099,9 +27109,9 @@ name: immature thymic epithelium namespace: zebrafish_anatomy def: "Epithelium of the thymus primordium composed of cells of immature morphology. The immature thymic epithelium is continuous with the pharyngeal epithelium. The immature thymic epithelium is composed of electron-lucent epithelial cells of irregular or polygonal shape and contain numerous ribosomes, large electron-lucent mitochondria, and rough endoplasmic reticulum. Nascent desmosomes join these primitive epithelial cells together." [ZFIN:ZDB-PUB-990414-60] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001077 ! thymus primordium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2014-03-11T03:28:25Z @@ -27112,7 +27122,7 @@ namespace: zebrafish_anatomy def: "Part of the gut where the pronephric tubules come together with the caudal end of the intestine attaching at 4dpf. The oviduct or sperm duct connect later." [ZFIN:ZDB-PUB-060508-11] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2014-03-12T09:34:37Z @@ -27124,7 +27134,7 @@ def: "The juncture where the intestine empties into the cloaca." [GOC:cvs, ORCi synonym: "gut opening" EXACT [] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000330 ! cloacal chamber -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-12T09:39:01Z @@ -27136,7 +27146,7 @@ def: "Epithelium lining the cloaca. The epithelium is a simple cuboidal epithel is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0005123 ! gut epithelium relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2014-03-12T10:18:40Z @@ -27145,6 +27155,7 @@ id: ZFA:0005784 name: striated muscle cell namespace: zebrafish_anatomy def: "Muscle cell which has as its direct parts myofilaments organized into sarcomeres." [GOC:tfm, ISBN:0721662544] +subset: cell_slim xref: CL:0000737 is_a: ZFA:0009114 ! muscle cell created_by: Ceri @@ -27162,7 +27173,7 @@ relationship: has_developmental_contribution_from ZFA:0000728 ! somite 2 relationship: has_developmental_contribution_from ZFA:0000732 ! somite 3 relationship: has_developmental_contribution_from ZFA:0005923 ! anterior migratory muscle precursor stream relationship: part_of ZFA:0000204 ! esophagus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-03-18T03:37:56Z @@ -27171,10 +27182,11 @@ id: ZFA:0005786 name: cleft cell namespace: zebrafish_anatomy def: "Wedge-shaped epidermal cell positioned along the apex of the developing fin fold. Each cleft cell retains a wedge-shaped form during fold formation and develops a basal cleft-shaped invagination. Invaginations are aligned in neighboring cleft cells so that these cells cap the distal boundary of the subepidermal space where collagenous extracellular fibres called actinotrichia run anteroposteriorly along the length of the fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-195] +subset: cell_slim is_a: ZFA:0009183 ! epidermal cell -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2014-03-25T09:31:29Z @@ -27185,7 +27197,7 @@ namespace: zebrafish_anatomy def: "Artery that runs along the midline from anterior to posterior regions of the hypothalamus and splits into two capillary branches (hyc). The formation of the artery is initiated at the hypophysis itself and extends anteriorly until it connects with the palatocerebral arteries at day 2.5." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111027-47, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T10:42:12Z @@ -27196,7 +27208,7 @@ namespace: zebrafish_anatomy def: "Vein thats tarts posterior of the hypophysis and drains the hypophyseal capillaries. It empties into the primary head sinus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0000082 ! vein relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T10:47:03Z @@ -27217,7 +27229,7 @@ namespace: zebrafish_anatomy def: "Pair of capillaries that bilaterally encompass the hypophysis starting at the anterior aspect of the hypophysis (pituitary). Directly posterior to the pituitary, the two capillaries fuse with the hypophyseal vein." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0005250 ! capillary relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T11:27:53Z @@ -27228,7 +27240,7 @@ namespace: zebrafish_anatomy def: "Surface structure that is a keratinized epidermal appendages that is a contact organ and secondary sex organ." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-05-15T03:26:12Z @@ -27239,7 +27251,7 @@ namespace: zebrafish_anatomy def: "Surface structure that is a protrusion from the rostral end of the jaw, supported by the mandibular projection." [ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] synonym: "lateral projections lower jaw" EXACT [] is_a: ZFA:0000292 ! surface structure -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:10:53Z @@ -27250,7 +27262,7 @@ namespace: zebrafish_anatomy def: "Layer of smooth cells composing the outer layer of the breeding tubercle. Cells in this layer have a high keratin content, lamellar bodies, and condensed chromosomes. This layer is repeatedly shed and regenerated." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:33:07Z @@ -27261,7 +27273,7 @@ namespace: zebrafish_anatomy def: "Cell layer that lies underneath the superficial layer of the breeding tubercle. Characterized by tight junctions within the layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:46:01Z @@ -27273,7 +27285,7 @@ def: "Intermediate layer of the breeding tubercles characterized by cells with synonym: "spinous keratinocyte layer" EXACT [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:46:51Z @@ -27284,7 +27296,7 @@ namespace: zebrafish_anatomy def: "Layer of breeding tubercle proximal to basal lamina of the integument." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:48:25Z @@ -27296,7 +27308,7 @@ def: "Breeding tubercles along the surface of the pectoral fin lepidotrichium of is_a: ZFA:0005791 ! breeding tubercle relationship: part_of ZFA:0000242 ! male organism relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-04T02:50:54Z @@ -27325,7 +27337,7 @@ namespace: zebrafish_anatomy def: "Portion of organism substance that is located between the cap and second tier layers of the breeding tubercles. The lipid lamellae is composed of lipids." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001487 ! portion of organism substance relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T04:00:53Z @@ -27337,9 +27349,9 @@ def: "The interrenal vessel (IRV) is the blood vessels supplying the interrenal synonym: "IRV" EXACT [] is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0005802 ! interrenal angiogenic sprout -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001345 ! interrenal gland -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-06-06T01:45:08Z @@ -27349,7 +27361,7 @@ name: interrenal angiogenic sprout namespace: zebrafish_anatomy def: "Sprout from the dorsal aorta that develops into the interrenal vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120905-5] is_a: ZFA:0005604 ! angiogenic sprout -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001346 ! interrenal primordium created_by: Ceri creation_date: 2014-06-10T10:26:33Z @@ -27423,9 +27435,9 @@ comment: Appears after cardiac looping ~30hpf. Derived from mesoderm. synonym: "proepicardial organ" EXACT [ZFIN:ZDB-PUB-080218-16] synonym: "proepicardium" EXACT [ZFIN:ZDB-PUB-140603-8] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-28T03:01:42Z @@ -27437,7 +27449,7 @@ def: "Network of heavily branched muscle in the atrium." [GOC:cvs, ORCiD:0000-00 synonym: "pectinate muscles" EXACT PLURAL [] is_a: ZFA:0005280 ! cardiac muscle relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-07-28T04:28:45Z @@ -27449,7 +27461,7 @@ def: "Trabecular layer of the atrial myocardium." [GOC:cvs, ORCiD:0000-0002-2244 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001374 ! atrial myocardium relationship: part_of ZFA:0005059 ! trabecular layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-28T04:35:49Z @@ -27573,7 +27585,7 @@ synonym: "ICV" RELATED [] synonym: "interfilamenti caudalis ventralis" EXACT [] is_a: ZFA:0005277 ! skeletal muscle relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-10-30T10:11:24Z @@ -27586,7 +27598,7 @@ synonym: "ICD" RELATED [] synonym: "interfilamenti caudalis dorsalis " EXACT [] is_a: ZFA:0005277 ! skeletal muscle relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-10-30T10:14:35Z @@ -27633,7 +27645,7 @@ namespace: zebrafish_anatomy def: "Cardiac muscle located in the trabecular layer of the ventricle that is attached to the base of the AV and BV valves. It is similar to the papillary muscle in mammals and birds but, does not attach to the ends of the valve leaflets." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0005280 ! cardiac muscle relationship: part_of ZFA:0005060 ! trabecular layer of ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-02-19T03:45:32Z @@ -27644,7 +27656,7 @@ namespace: zebrafish_anatomy def: "Cardiac muscle located in the trabecular layer of the ventricle that spans the central lumen near the ventricular apex. The transverse muscle band superficially resembles the septomarginal trabecula found in reptilian and mammalian hearts in that it spans the ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0005280 ! cardiac muscle relationship: part_of ZFA:0005060 ! trabecular layer of ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-02-19T03:48:37Z @@ -27681,7 +27693,7 @@ synonym: "haemopoietic cell" RELATED [] synonym: "hemopoietic cell" EXACT [] xref: CL:0000988 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-02-27T09:55:34Z @@ -27707,7 +27719,7 @@ relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0001606 ! pharyngeal arch 3 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-21T04:16:23Z @@ -27722,7 +27734,7 @@ relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0001607 ! pharyngeal arch 4 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-22T10:05:13Z @@ -27737,7 +27749,7 @@ relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0001608 ! pharyngeal arch 5 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-22T10:06:52Z @@ -27752,7 +27764,7 @@ relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0001610 ! pharyngeal arch 7 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-04-22T10:18:37Z @@ -27764,9 +27776,9 @@ def: "Lymphangiogenic sprout that originates from the common cardinal vein and comment: Although a facial lymphatic vessel has previously been described using lymphangiography in 5-week-old zebrafish (Yaniv et al., 2006), we are not sure whether\nthis previously described vessel is connected to, or derived from, the FL network that we have identified (ZDB-PUB-120529-43). synonym: "FLS" EXACT [] is_a: ZFA:0005603 ! lymphangiogenic sprout -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2015-04-22T12:15:12Z @@ -27780,7 +27792,7 @@ synonym: "LFL" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005836 ! facial lymphatic sprout relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-04-22T12:41:36Z @@ -27793,7 +27805,7 @@ synonym: "otolithic lymphatic vessel" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-04-22T02:06:44Z @@ -27807,7 +27819,7 @@ synonym: "MFL " EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-23T01:49:47Z @@ -27819,7 +27831,7 @@ def: "Lymph vasculature surrounding the intestines." [GOC:cvs, ORCID:0000-0002-2 synonym: "" RELATED [] synonym: "intestinal lymphatics" EXACT [] is_a: ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-30T11:15:28Z @@ -27831,7 +27843,7 @@ def: "Lymph vessel that follows the supraintestinal artery." [GOC:CVS, ORCID:000 synonym: "UR-IL" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005843 ! right intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:25:27Z @@ -27843,7 +27855,7 @@ def: "Pair of lymph vessel that follows the right subintestinal vein. At 6 dpf, synonym: "LR-IL" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005843 ! right intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:28:11Z @@ -27875,7 +27887,7 @@ synonym: "LL-IL" EXACT [] synonym: "lower left intestinal lymphatic" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005846 ! left intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:49:08Z @@ -27896,7 +27908,7 @@ def: "Lymph vessel on the left of the intestine that runs parallel to the upper synonym: "UL-IL" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005846 ! left intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T12:28:46Z @@ -27907,7 +27919,7 @@ namespace: zebrafish_anatomy def: "Lymph vessel that connects lymph vessels within the intestinal lymphatic network." [GOC:cvs, ORCID:0000-0002-2244-7917] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005840 ! intestinal lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T01:40:05Z @@ -27917,7 +27929,7 @@ name: ceratobranchial 5 replacement tooth namespace: zebrafish_anatomy def: "Is a multi-tissue structure composed of dentine, enameloid and tooth pulp that develops from the dental organ. These structures successively replace the primary ceratobranchial teeth." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-001208-4] is_a: ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth creation_date: 2015-06-19T12:48:15Z [Term] @@ -27939,7 +27951,7 @@ name: ceratobranchial 5 primary tooth namespace: zebrafish_anatomy def: "Is a multi-tissue structure composed of dentine, enameloid and tooth pulp that develops from the dental organ. These are the first teeth to develop." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-020820-10] is_a: ZFA:0000694 ! ceratobranchial 5 tooth -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-07-01T04:53:58Z @@ -27960,7 +27972,7 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 5V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-07-02T09:04:21Z @@ -27971,7 +27983,7 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 3V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-07-02T09:05:23Z @@ -28011,7 +28023,7 @@ namespace: zebrafish_anatomy def: "Capillaries that branch from the hyaloid artery and drain into the hyaloid vein. The hyaloid capillaries are located behind the lens and may be transient." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-150419-5] is_a: ZFA:0005046 ! hyaloid vessel is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2015-08-17T04:43:51Z @@ -28048,7 +28060,7 @@ name: ovarian lymph vessel namespace: zebrafish_anatomy def: "Lymph vessels within the ovary. These vessels are located in the interstitium between ovarian follicles and appear to envelop arterioles." [GOC:CVS, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-130218-10] is_a: ZFA:0005844 ! lymph vessel -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2015-10-28T12:00:39Z @@ -28070,7 +28082,7 @@ namespace: zebrafish_anatomy def: "Portion of optic tract that innervates the optic tectum." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1095, ZFIN:ZDB-PUB-961014-148] is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000252 ! optic tract -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2016-01-11T03:48:45Z @@ -28079,6 +28091,7 @@ id: ZFA:0005865 name: reticulospinal neuron namespace: zebrafish_anatomy def: "Neuron with the large soma in the brain with an axon projecting caudally to the spinal cord." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-594] +subset: cell_slim is_a: ZFA:0009191 ! CNS interneuron created_by: Ceri creation_date: 2016-01-12T10:33:08Z @@ -28088,6 +28101,7 @@ id: ZFA:0005866 name: vestibulospinal neuron namespace: zebrafish_anatomy def: "CNS interneuron with a soma located in a cluster in the lateral wall of the medulla, with dendrites confined to the neuropil, that has connections to the vestibular and lateral line neurons." [ZFIN:ZDB-PUB-961014-572] +subset: cell_slim synonym: "V" RELATED [] is_a: ZFA:0009191 ! CNS interneuron created_by: Ceri @@ -28101,7 +28115,7 @@ def: "Mesoderm part of the head." [GOC:cvs, ORCiD:0000-0002-2244-7917\,] is_a: ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0000414 ! presumptive cephalic mesoderm relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2016-01-14T02:01:33Z @@ -28112,9 +28126,9 @@ namespace: zebrafish_anatomy def: "Rostral cell mass bordering the pretectum. The cells are stained with the gene nurod and are Hu positive. The region is named for its presumed homology to the avian griseum tectale." [ZFIN:ZDB-PUB-070711-1] synonym: "tectal grey " EXACT [] is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2016-01-22T12:54:41Z @@ -28124,9 +28138,9 @@ name: cerebellar plate namespace: zebrafish_anatomy def: "Multi-tissue structure that is made up of the external granular layer and the ventral proliferative layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2016-02-02T11:33:30Z @@ -28136,9 +28150,9 @@ name: cerebellar plate ventral proliferative layer namespace: zebrafish_anatomy def: "Proliferative zone on the ventral side of the cerebellar plate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005869 ! cerebellar plate -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2016-02-02T11:45:44Z @@ -28148,9 +28162,9 @@ name: region of the nucleus of the medial longitudinal fascicle namespace: zebrafish_anatomy def: "Portion of tissue in the midbrain that will develop into the nucleus of the medial longitudinal fasciculus synencephalon." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2016-02-02T11:47:50Z @@ -28161,9 +28175,9 @@ def: "Proliferative region that forms on peripheral side of the cerebellar plate synonym: "cerebellar plate peripheral proliferative zone" RELATED [] synonym: "EGL" EXACT [] is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005869 ! cerebellar plate -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2016-02-02T11:50:39Z @@ -28184,6 +28198,7 @@ id: ZFA:0005874 name: spiral neuron namespace: zebrafish_anatomy def: "Spiral neurons are excitatory interneurons located in rhombomere 3 and have contralateral projections that cross the midline forming commissures in rhombomere 3. After crossing the midline the two commissures fuse and project caudally synapsing with the Mauthner neuron. As they enter the axon cap, spiral fiber neurons lose their myelin and wrap around the axon hillock in a stereotyped spiral, where they make both electrical and glutamatergic synapses on the M cell axon close to the M-cell soma and with one another. Spiral neurons produced biphasic excitatory postsynaptic potentials (EPSPs) in the contralateral M-cell with a short latency." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010711-2, ZFIN:ZDB-PUB-110110-13, ZFIN:ZDB-PUB-150512-4] +subset: cell_slim is_a: ZFA:0005209 ! hindbrain interneuron relationship: part_of ZFA:0000948 ! rhombomere 3 created_by: Ceri @@ -28199,7 +28214,7 @@ synonym: " TCPT" EXACT [ZFIN:ZDB-PUB-961014-1268] synonym: "tract of the commissure of the posterior tuberculum" EXACT [] is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000491 ! commissure of the caudal tuberculum -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2016-06-07T10:08:17Z @@ -28210,7 +28225,7 @@ namespace: zebrafish_anatomy def: "The space between the cornea and lens in the anterior segment of the eye where the aqueous humor is located." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-10-13T15:42:03Z @@ -28221,7 +28236,7 @@ namespace: zebrafish_anatomy def: "Commissure that is formed by a subset of TCPT axons that cross the midline in the diencephalon. The TCPTc does not appear to cross with other commissures. The initial crossing of the TCPTc occurs at approximately 36 hpf." [GOC:cvs, GOC:dsf, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120419-3.] synonym: "Commissure of the TCPT" EXACT [] is_a: ZFA:0000338 ! diencephalic white matter -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2016-10-18T10:07:14Z @@ -28230,6 +28245,7 @@ id: ZFA:0005878 name: oogonia namespace: zebrafish_anatomy def: "An undifferentiated germ cell that proliferates rapidly and gives rise to oocytes. In zebrafish oogonia are round cells, with centrally located nucleoli, which are strongly basophilic. Oogonia in larva zebrafish fish are often found in clusters of two or four cells, corresponding to the second, or third oogonial divisions, presumably arising from mitotic divisions of primordial germ cells." [GOC:cvs, GOC:tfm, ISBN:0721662544, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120718-30] +subset: cell_slim xref: CL:0000024 is_a: ZFA:0009016 ! germ line cell relationship: part_of ZFA:0000413 ! gonad @@ -28265,7 +28281,7 @@ namespace: zebrafish_anatomy def: "The membranous sheath that surrounding the seminiferous tubule." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:44:18Z @@ -28276,7 +28292,7 @@ namespace: zebrafish_anatomy def: "Structure in the testis formed by cytoplasmic projections of one or two Sertoli cells that surround a single spermatogonium. Sperm production occurs with in the cyst and the spermatogonium divides to generate approximately 1300 mature sperm. A given Sertoli cell is in contact with only one germ cell clone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:48:48Z @@ -28287,7 +28303,7 @@ namespace: zebrafish_anatomy def: "Membranous sheath that surrounds the testis." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:51:24Z @@ -28298,7 +28314,7 @@ namespace: zebrafish_anatomy def: "Lumen of the seminiferous tubule. Mature sperm is stored in the tubular lumen." [GOC:cvs, https://en.wikibooks.org/wiki/The_Zebrafish_in_Toxicology/Spermatogenesis, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2017-05-16T13:18:07Z @@ -28308,8 +28324,8 @@ name: operculohyoid ligament namespace: zebrafish_anatomy def: "Ligament that connects the anterior apex of the opercle to the posterior end of the ceratohyal. The ligament extends orthogonal and anterior to the opercle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-161030-16] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec creation_date: 2017-06-12T13:27:26Z [Term] @@ -28319,9 +28335,9 @@ namespace: zebrafish_anatomy def: "Cartilage that attaches the parachordal cartilage to the auditory capsule anterior to the basicapsular fenestra. The anterior basicapsular commissure are paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "anterior basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2017-10-20T11:38:57Z @@ -28332,9 +28348,9 @@ namespace: zebrafish_anatomy def: "Cartilage that attaches the parachordal cartilage to the auditory capsule posterior of the basicapsular fenestra. The posterior basicapsular commissure are paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "posterior basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2017-10-20T11:42:11Z @@ -28346,9 +28362,9 @@ def: "Cartilage that grows from the auditory capsule medially toward the anterio synonym: " lateral basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] synonym: "lateral commissure " RELATED [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2017-10-20T11:51:14Z @@ -28416,7 +28432,7 @@ namespace: zebrafish_anatomy def: "Chamber in the prootic where the trunks of the trigeminal facial nerve complex pass from the brain to the outside of the cranium. In the adult, a posteromedial extension from the prootic delimits the medial boundary of the trigeminal-facial chamber. The anterior opening of the trigeminal-facial chamber lies between the prootic and the pterosphenoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "trigeminofacialis chamber" EXACT [] is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-27T16:53:59Z @@ -28451,9 +28467,9 @@ namespace: zebrafish_anatomy def: "Tissue that lies between the caudal artery and the caudal vein plexus where definitive hematopoiesis occurs after 48hpf and before the hematopoietic progenitors migrate to the thymus and kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-061227-29, ZFIN:ZDB-PUB-070303-37] synonym: "posterior blood island" RELATED [ZFIN:ZDB-PUB-070303-37] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2018-02-21T12:40:50Z @@ -28464,7 +28480,7 @@ namespace: zebrafish_anatomy def: "The initial growth point of the scale. In zebrafish the focus is on the anterior edge of the scale." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180311-2] is_a: ZFA:0000037 ! anatomical structure relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-08-30T16:47:45Z @@ -28476,7 +28492,7 @@ def: "Grooves on the scale radiating from the focus. Zebrafish have primary radi synonym: "scale radii" EXACT PLURAL [] is_a: ZFA:0001690 ! groove relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-08-30T16:50:48Z @@ -28487,9 +28503,9 @@ namespace: zebrafish_anatomy def: "Transient groove in the dorsal eye lined by basal lamina. The groove extends across the dorsal retina to partially separate the nasal and temporal retinal lobes. The sulcus forms soon after optic cup formation and as the eye develops it becomes broader and shallower until it is undetectable." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180310-10] synonym: "dorsal ocular sulcus" EXACT [] is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Ceri creation_date: 2018-09-05T16:23:34Z @@ -28500,9 +28516,9 @@ namespace: zebrafish_anatomy def: "A medial cartilaginous spur that develops from the dorsomedial edge of the palatoquadrate. It is derived from cells located in the maxillary prominence of the first pharyngeal arch and gives rise to the metapterygoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100726-23, ZFIN:ZDB-PUB-961014-192] synonym: "Ptp" RELATED [] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001399 ! palatoquadrate cartilage -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2018-09-12T09:53:49Z @@ -28521,7 +28537,7 @@ name: retroarticular process namespace: zebrafish_anatomy def: "A protrusion of cartilage at the posteroventral tip of Meckel's cartilage that gives rise to the retroarticular." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-161203-3] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0001205 ! Meckel's cartilage created_by: Ceri creation_date: 2018-09-12T10:37:59Z @@ -28533,7 +28549,7 @@ namespace: zebrafish_anatomy def: "Cartilaginous protrusion on the posterodorsal region of Meckel's cartilage. The coronoid process of Meckel's cartilage forms the dorsal portion of the articulation with the anteroventral corner of the palatoquadrate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060724-1, ZFIN:ZDB-PUB-161203-3] synonym: " coronoid process of Meckel's cartilage" EXACT [] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001205 ! Meckel's cartilage created_by: Ceri creation_date: 2018-09-12T14:26:48Z @@ -28544,9 +28560,9 @@ name: Reissner's fiber namespace: zebrafish_anatomy def: "Thread-like fibrous aggregation of secreted molecules extending from the subcommissural organ (SCO) through the ventricular system and central canal to the end of the spinal cord." [GOC:cvs, ISBN:978-0471888895, ZFIN:ZDB-PUB-980205-16] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000938 ! central canal -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2018-11-29T11:06:47Z @@ -28559,7 +28575,7 @@ synonym: "synaptic neuropil " RELATED [ZFIN:ZDB-PUB-101101-16] synonym: "tectial lamina" RELATED [ZFIN:ZDB-PUB-081218-37] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2019-01-28T17:08:19Z @@ -28570,8 +28586,8 @@ namespace: zebrafish_anatomy def: "Region the larval brain that is a forerunner of the adult central and superficial pretectal regions. This region is non ventricular neural proliferation zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-030115-8, ZFIN:ZDB-PUB-990406-3] synonym: "M1" EXACT [ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2019-01-29T16:22:51Z @@ -28584,8 +28600,8 @@ synonym: "early migrated posterior tubercular region" RELATED [ZFIN:ZDB-PUB-0707 synonym: "M2" RELATED [ZFIN:ZDB-PUB-070711-1] synonym: "preglomerular anlagen " RELATED [ZFIN:ZDB-PUB-020912-2] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2019-01-29T16:37:24Z @@ -28596,8 +28612,8 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is presumed to give rise to the entopenduncular nucleus." [ZFIN:ZDB-PUB-040304-8, ZFIN:ZDB-PUB-090914-27] synonym: "M3" NARROW [] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2019-01-30T13:02:59Z @@ -28609,8 +28625,8 @@ def: "Portion of tissue that gives rise to the lateral nucleus of the ventral te synonym: "lateral nucleus of area ventralis telencepha" RELATED [ZFIN:ZDB-PUB-090814-14] synonym: "M4" RELATED [ZFIN:ZDB-PUB-090814-14] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2019-01-30T13:42:52Z @@ -28622,7 +28638,7 @@ def: "Pouch at the end of the endolymphatic duct that helps regulates pressure o xref: TAO:0002194 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown creation_date: 2019-04-16T14:25:54Z [Term] @@ -28642,7 +28658,7 @@ synonym: "argenta " EXACT PLURAL [] synonym: "iridophore layer iris" EXACT [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2019-05-29T15:43:36Z @@ -28653,7 +28669,7 @@ namespace: zebrafish_anatomy def: "Layer of melanophores that are positioned behind the argenta. The melanophore layer absorbs unfocused light preventing it from reaching the retina." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180822-3] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2019-05-29T15:55:27Z @@ -28665,7 +28681,7 @@ def: "Iridophore layer that forms along the dorsal region of the poster segment synonym: "tapetum cellulosum" RELATED [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2019-05-29T16:15:09Z @@ -28698,7 +28714,7 @@ synonym: "perpendicular posterior lateral line neuromast" EXACT [ZFIN:ZDB-PUB-04 is_a: ZFA:0000940 ! posterior lateral line neuromast is_a: ZFA:0005918 ! dorsal-ventral polarized neuromast relationship: develops_from ZFA:0005116 ! secondary posterior lateral line primordium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: ceriv creation_date: 2020-06-18T10:46:54Z @@ -28723,7 +28739,7 @@ subset: cell_slim synonym: "migratory mesenchymal precursor " EXACT [ZFIN:ZDB-PUB-001205-1] synonym: "MMP" RELATED [] is_a: ZFA:0009291 ! muscle precursor cell -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites creation_date: 2020-07-01T10:51:34Z [Term] @@ -28732,8 +28748,8 @@ name: migratory muscle precursor stream namespace: zebrafish_anatomy def: "Groups of migratory muscle precursor that migrate from a conserved origination in concerted manner along stereotyped path." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: ceriv creation_date: 2020-07-01T11:06:26Z @@ -28744,7 +28760,7 @@ namespace: zebrafish_anatomy def: "Muscle precursor stream that originates from the ventral regions of somites 1-3 and migrates anterior of the pectoral fin bud. Migratory muscle precursor from this stream form the esophageal striated muscle and sternohyoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-130709-61] synonym: "first migratory stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:10:27Z @@ -28755,7 +28771,7 @@ namespace: zebrafish_anatomy def: "Muscle precursor stream that originates from the ventral regions of somites 2-4 and migrates toward the pectoral fin bud. Migratory muscle precursors from this stream contribute to the pectoral fin musculature and make a small contribution to the posterior hypaxial muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-190808-2] synonym: "middle migratory muscle precursor stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:14:03Z @@ -28766,7 +28782,7 @@ namespace: zebrafish_anatomy def: "Migratory muscle precursor stream that originates from the ventral regions of somites 5-7 that migrates posterior to the pectoral fin bud. Migratory muscle precursors from this stream form the posterior hypaxial muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-190427-4] synonym: "third migratory stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:17:29Z @@ -28780,10 +28796,10 @@ synonym: "inferior obliquus muscle" BROAD [ZFIN:ZDB-PUB-020913-1] synonym: "PHM" RELATED [] synonym: "ventral-most hypaxial muscle " EXACT [ZFIN:ZDB-PUB-010924-1] is_a: ZFA:0000362 ! hypaxialis -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: has_developmental_contribution_from ZFA:0005924 ! middle migratory muscle precursor stream relationship: has_developmental_contribution_from ZFA:0005925 ! posterior migratory muscle precursor stream -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: ceriv creation_date: 2020-07-01T11:21:03Z @@ -28793,7 +28809,7 @@ name: endothelial blood brain barrier namespace: zebrafish_anatomy def: "Blood vessel endothelium that restricts the passage of circulating substances from the blood to the brain parenchyma while actively facilitating the passage of nutrients and removal of waste products. The developing blood brain barrier undergoes a period of transcytosis and leaks that decrease as the mature form is established. The barrier matures in a posterior to anterior direction." [GOC:cvs, ORCID:000-0002-2244-7917, ZFIN:ZDB-PUB-190821-6] is_a: ZFA:0005259 ! continuous blood vessel endothelium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth creation_date: 2020-07-30T10:25:52Z [Term] @@ -28824,7 +28840,7 @@ name: lumen namespace: zebrafish_anatomy def: "Anatomical space within a tubular organ, duct, or vessel." [GOC:cvs, https:en.org/wiki/Lumen_(anatomy), ORCID:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown creation_date: 2020-11-20T13:39:11Z [Term] @@ -28842,7 +28858,7 @@ name: developmental vascular plexus namespace: zebrafish_anatomy def: "Transient plexus formed by vasculogenesis that results in the formation of an intermediate network of similar sized vessels with polygonal-shaped avascular spaces. As the vasculature matures it is remodeled into a hierarchical vascular tree." [GOC:cvs, ORCID:0000-0002-2244-7917, PMID:23799579, ZFIN:ZDB-PUB-150418-3] is_a: ZFA:0005931 ! vascular plexus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-11-20T14:29:48Z @@ -28864,7 +28880,7 @@ namespace: zebrafish_anatomy def: "Non stereotyped venous plexus derived from specialised angioblast that originate in the floor of the posterior cardinal vein. Emerges from the duct of Cuvier at 2dpf as a reticular structure that spreads bilaterally over the surface of the yolk and gut." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-150418-3, ZFIN:ZDB-PUB-151021-20, ZFIN:ZDB-PUB-151104-9] synonym: "subintestinal plexus" EXACT [] is_a: ZFA:0005931 ! vascular plexus -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T14:35:56Z @@ -28876,7 +28892,7 @@ def: "Subintestinal venous plexus that wraps the yolk. Anterior vessels connecte synonym: "yolk plexus" RELATED [] is_a: ZFA:0005932 ! developmental vascular plexus is_a: ZFA:0005934 ! subintestinal venous plexus -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 created_by: ceriv creation_date: 2020-11-20T14:41:40Z @@ -28887,7 +28903,7 @@ namespace: zebrafish_anatomy def: "Plexus that wraps the anterior digestive system. These vessels form the permanent, superficial vessels of the digestive system. The left subintestinal vein regresses and empties into the right subintestinal vein." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-151021-20] is_a: ZFA:0005933 ! mature plexus is_a: ZFA:0005934 ! subintestinal venous plexus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: ceriv creation_date: 2020-11-20T14:43:36Z @@ -28898,9 +28914,9 @@ namespace: zebrafish_anatomy def: "Vessels that form connections between the sub intestinal vein and the supraintestinal artery. There are fewer ICVs on the right side of the fish due to the asymmetrical development of the subintestinal veins." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-151104-9] synonym: "ICV" RELATED [] is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005934 ! subintestinal venous plexus -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T15:14:22Z @@ -28943,12 +28959,21 @@ creation_date: 2021-01-27T10:38:07Z id: ZFA:0005942 name: lysosome-rich enterocyte namespace: zebrafish_anatomy -def: "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes ." [GOC:cvs, ORCID:0000-0002-1009-339X, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190903-3] +def: "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes ." [GOC:cvs, ORCID:0000-0002-1009-339X, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190903-3] subset: cell_slim is_a: ZFA:0009269 ! enterocyte created_by: ceriv creation_date: 2021-01-27T10:44:40Z +[Term] +id: ZFA:0005943 +name: perivitelline fluid +namespace: zebrafish_anatomy +def: "Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance." [ZFIN:ZDB-PUB-200910-2] +is_a: ZFA:0000020 ! extraembryonic structure +created_by: ceriv +creation_date: 2021-03-25T15:52:05Z + [Term] id: ZFA:0005944 name: mural cell @@ -28958,10 +28983,152 @@ subset: cell_slim xref: CL:0008034 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: ceriv creation_date: 2021-01-27T11:37:04Z +[Term] +id: ZFA:0005945 +name: long double cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "red-sensitive cone cell" EXACT [ZFIN:ZDB-PUB-990520-1] +synonym: "unequal double cone cell" RELATED [ZFIN:ZDB-PUB-961014-677] +is_a: ZFA:0009262 ! retinal cone cell +relationship: start ZFS:0000033 ! hatching:long-pec +creation_date: 2021-07-09T09:06:25Z + +[Term] +id: ZFA:0005946 +name: short double cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "green-sensitive cone" EXACT [ZFIN:ZDB-PUB-990520-1] +synonym: "unequal double cone cell" RELATED [ZFIN:ZDB-PUB-961014-677] +is_a: ZFA:0009262 ! retinal cone cell +relationship: start ZFS:0000033 ! hatching:long-pec +created_by: ceriv +creation_date: 2021-07-09T10:53:10Z + +[Term] +id: ZFA:0005947 +name: long single cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "blue-sensitive cone cell" EXACT [ZFIN:ZDB-PUB-990520-1] +is_a: ZFA:0009262 ! retinal cone cell +created_by: ceriv +creation_date: 2021-07-09T11:01:04Z + +[Term] +id: ZFA:0005948 +name: short single cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "ultraviolet-sensitive cone" EXACT [] +synonym: "UV-sensitive cone" EXACT [ZFIN:ZDB-PUB-990520-1] +is_a: ZFA:0009262 ! retinal cone cell +created_by: ceriv +creation_date: 2021-07-09T11:10:25Z + +[Term] +id: ZFA:0005949 +name: heart lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the heart." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0005844 ! lymph vessel +relationship: part_of ZFA:0005952 ! heart lymphatic system +relationship: start ZFS:0000041 ! larval:days 21-29 +creation_date: 2021-08-13T11:47:35Z + +[Term] +id: ZFA:0005950 +name: bulbus arteriosus lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +synonym: "outflow tract lymph vessel" EXACT [] +is_a: ZFA:0005949 ! heart lymph vessel +relationship: part_of ZFA:0000173 ! bulbus arteriosus +created_by: ceriv +creation_date: 2021-08-13T11:53:55Z + +[Term] +id: ZFA:0005951 +name: cardiac ventricle lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0005949 ! heart lymph vessel +relationship: part_of ZFA:0000009 ! cardiac ventricle +relationship: start ZFS:0000043 ! juvenile:days 45-89 +created_by: ceriv +creation_date: 2021-08-13T11:58:24Z + +[Term] +id: ZFA:0005952 +name: heart lymphatic system +namespace: zebrafish_anatomy +def: "Lymphatic system of the heart." [GOC:CVS, ORCID:0000-0002-2244-7917] +is_a: ZFA:0005811 ! heart vasculature +created_by: ceriv +creation_date: 2021-08-13T12:23:44Z + +[Term] +id: ZFA:0005953 +name: coronary capillary plexus +namespace: zebrafish_anatomy +def: "Capillary plexus that is located in the heart." [GOC:cvs, ORCID:0000-0002-2244-7917] +is_a: ZFA:0005811 ! heart vasculature +created_by: ceriv +creation_date: 2021-08-13T12:26:17Z + +[Term] +id: ZFA:0005954 +name: cardiac lymphatic endothelial cluster +namespace: zebrafish_anatomy +def: "Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +synonym: "isolated lymph endothelial cells" EXACT [] +is_a: ZFA:0005955 ! lymphatic endothelial cluster +relationship: part_of ZFA:0005952 ! heart lymphatic system +relationship: start ZFS:0000043 ! juvenile:days 45-89 +created_by: ceriv +creation_date: 2021-08-13T12:30:04Z + +[Term] +id: ZFA:0005955 +name: lymphatic endothelial cluster +namespace: zebrafish_anatomy +def: "Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0000385 ! lymphatic system +created_by: ceriv +creation_date: 2021-08-13T12:53:02Z + +[Term] +id: ZFA:0005956 +name: germline stem cell +namespace: zebrafish_anatomy +def: "A stem cell that can give rise to cell types of the germ-line." [ORCID:0000-0002-4142-7153] +subset: cell_slim +xref: CL:0000014 +is_a: ZFA:0005957 ! stem cell +created_by: ceriv +creation_date: 2021-08-13T13:44:39Z + +[Term] +id: ZFA:0005957 +name: stem cell +namespace: zebrafish_anatomy +def: "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells." [GOC:tfm] +subset: cell_slim +xref: CL:0000034 +is_a: ZFA:0009000 ! cell +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T13:47:16Z + [Term] id: ZFA:0006000 name: intermediate hypothalamus @@ -28970,9 +29137,9 @@ def: "Brain structure that lies perpendicular to the longitudinal axis of the em synonym: "Hi" EXACT [] xref: TAO:0006000 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: giles creation_date: 2009-03-26T02:23:30Z @@ -28986,7 +29153,7 @@ xref: TAO:0007000 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula relationship: part_of ZFA:0000428 ! saccule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007001 @@ -28998,9 +29165,9 @@ synonym: "dorsorostral cluster" EXACT [] synonym: "drc" EXACT [] xref: TAO:0007001 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0007002 @@ -29012,9 +29179,9 @@ synonym: "ventrorostral cluster" EXACT [] synonym: "vrc" EXACT [] xref: TAO:0007002 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007003 @@ -29026,9 +29193,9 @@ synonym: "ventral caudal cluster" EXACT [] synonym: "ventrocaudal cluster" EXACT [] xref: TAO:0007003 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007004 @@ -29038,9 +29205,9 @@ def: "Early-developing neuronal cluster of the epiphysis. By 24 hpf the pioneer synonym: "ec" EXACT [] xref: TAO:0007004 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000019 ! epiphysis -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007005 @@ -29063,7 +29230,7 @@ synonym: "lips" EXACT PLURAL [] xref: TAO:0007006 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0000547 ! mouth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007008 @@ -29075,7 +29242,7 @@ synonym: "ventral intermandibulari anterior" EXACT PLURAL [] xref: TAO:0007008 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007009 @@ -29086,7 +29253,7 @@ synonym: "nerves" EXACT PLURAL [] xref: TAO:0007009 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007010 @@ -29119,7 +29286,7 @@ synonym: "lateral forebrain bundles" EXACT PLURAL [] xref: TAO:0007012 is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007013 @@ -29129,7 +29296,7 @@ def: "Non neural ectoderm that surrounds the presumptive neural plate and gives synonym: "panplacodal ectoderm" EXACT [ZFIN:ZDB-PUB-070122-31] xref: TAO:0007013 is_a: ZFA:0001178 ! non neural ectoderm -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007014 @@ -29138,9 +29305,9 @@ namespace: zebrafish_anatomy def: "Rostral portion of embryonic tissue that gives rise to the anterior neural plate." [GOC:mh, GOC:ymb, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-9900-7880] xref: TAO:0007014 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0007015 @@ -29149,9 +29316,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of embryonic tissue that gives rise to the posterior neural plate." [GOC:mh, GOC:ymb, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-9900-7880] xref: TAO:0007015 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0007016 @@ -29161,9 +29328,9 @@ def: "Rostral portion of the neural plate. Develops into the anterior neural ke xref: TAO:0007016 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007014 ! anterior presumptive neural plate -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0007017 @@ -29173,9 +29340,9 @@ def: "Posterior portion of the neural plate that gives rise to the posterior ne xref: TAO:0007017 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007015 ! posterior presumptive neural plate -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007018 @@ -29185,9 +29352,9 @@ def: "Anterior portion of anterior neural plate that gives rise to the forebrain xref: TAO:0007018 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000062 ! presumptive forebrain -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007019 @@ -29197,9 +29364,9 @@ def: "Portion of neural plate that gives rise to the midbrain neural keel." [GO xref: TAO:0007019 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000148 ! presumptive midbrain -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007020 @@ -29210,9 +29377,9 @@ synonym: "diencephalic-mesencephalic boundary neural plate" EXACT [] xref: TAO:0007020 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001368 ! presumptive forebrain midbrain boundary -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007021 @@ -29222,9 +29389,9 @@ def: "Portion of the posterior neural plate that gives rise to the spinal cord n xref: TAO:0007021 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000417 ! presumptive spinal cord -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007022 @@ -29234,9 +29401,9 @@ def: "Portion of posterior neural plate that gives rise to the hindbrain neural xref: TAO:0007022 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000569 ! presumptive hindbrain -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007023 @@ -29246,9 +29413,9 @@ def: "Posterior portion of the neural keel that gives rise to the posterior neur xref: TAO:0007023 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007017 ! posterior neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007024 @@ -29258,9 +29425,9 @@ def: "Rostral portion of the neural keel. Develops into the anterior neural rod xref: TAO:0007024 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007016 ! anterior neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007025 @@ -29270,9 +29437,9 @@ def: "Portion of neural keel that gives rise to the midbrain neural rod." [GOC: xref: TAO:0007025 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007019 ! midbrain neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007026 @@ -29282,9 +29449,9 @@ def: "Anterior portion of anterior neural keel that gives rise to the forebrain xref: TAO:0007026 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007018 ! forebrain neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007027 @@ -29295,9 +29462,9 @@ synonym: "diencephalic-mesencephalic boundary neural keel" EXACT [] xref: TAO:0007027 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007020 ! forebrain midbrain boundary neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007028 @@ -29306,9 +29473,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural keel that gives rise to the spinal cord neural rod." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007028 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007029 @@ -29318,9 +29485,9 @@ def: "Portion of posterior neural keel that gives rise to the hindbrain neural r xref: TAO:0007029 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007022 ! hindbrain neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007030 @@ -29330,9 +29497,9 @@ def: "Posterior portion of the neural rod that gives rise to the posterior neura xref: TAO:0007030 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007023 ! posterior neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007031 @@ -29342,9 +29509,9 @@ def: "Rostral portion of the neural rod. Develops into the anterior neural tube xref: TAO:0007031 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007024 ! anterior neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007032 @@ -29354,9 +29521,9 @@ def: "Portion of neural rod that gives rise to the midbrain neural tube." [GOC xref: TAO:0007032 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007025 ! midbrain neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007033 @@ -29367,9 +29534,9 @@ synonym: "diencephalic-mesencephalic boundary neural rod" EXACT [] xref: TAO:0007033 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007027 ! forebrain midbrain boundary neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007034 @@ -29379,9 +29546,9 @@ def: "Anterior portion of anterior neural rod that gives rise to the forebrain n xref: TAO:0007034 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007026 ! forebrain neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007035 @@ -29390,9 +29557,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural rod that gives rise to the spinal cord neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007035 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007036 @@ -29402,9 +29569,9 @@ def: "Portion of posterior neural rod that gives rise to the hindbrain neural tu xref: TAO:0007036 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007029 ! hindbrain neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007037 @@ -29414,9 +29581,9 @@ def: "Posterior portion of the neural tube that gives rise to the hindbrain and xref: TAO:0007037 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007030 ! posterior neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007038 @@ -29426,9 +29593,9 @@ def: "Rostral portion of the neural tube." [GOC:mh, GOC:ymb, ORCiD:0000-0001-911 xref: TAO:0007038 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007031 ! anterior neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007039 @@ -29438,9 +29605,9 @@ def: "Portion of neural tube that gives rise to the midbrain." [GOC:mh, GOC:ymb xref: TAO:0007039 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007032 ! midbrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007040 @@ -29451,9 +29618,9 @@ synonym: "diencephalic-mesencephalic boundary neural tube" EXACT [] xref: TAO:0007040 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007033 ! forebrain midbrain boundary neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007041 @@ -29463,9 +29630,9 @@ def: "Anterior portion of anterior neural rod that gives rise to the forebrain." xref: TAO:0007041 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007034 ! forebrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007042 @@ -29474,9 +29641,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural tube that gives rise to the spinal cord." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007042 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007043 @@ -29486,9 +29653,9 @@ def: "Portion of posterior neural tube that gives rise to the hindbrain." [GOC:m xref: TAO:0007043 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007036 ! hindbrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007044 @@ -29499,9 +29666,9 @@ synonym: "midbrain-hindbrain boundary neural plate" EXACT [] xref: TAO:0007044 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001187 ! presumptive midbrain hindbrain boundary -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007045 @@ -29512,9 +29679,9 @@ synonym: "midbrain-hindbrain boundary neural keel" EXACT [] xref: TAO:0007045 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007044 ! midbrain hindbrain boundary neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007046 @@ -29525,9 +29692,9 @@ synonym: "midbrain-hindbrain boundary neural rod" EXACT [] xref: TAO:0007046 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007045 ! midbrain hindbrain boundary neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007047 @@ -29538,9 +29705,9 @@ synonym: "midbrain-hindbrain boundary neural tube" EXACT [] xref: TAO:0007047 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007046 ! midbrain hindbrain boundary neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007048 @@ -29552,7 +29719,7 @@ synonym: "ventral intermandibulari posterior" EXACT PLURAL [] xref: TAO:0007048 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007049 @@ -29562,8 +29729,8 @@ def: "Is a mandibular muscle that forms along the palatoquadrates and inserts on synonym: "dorsal adductor mandibulae" EXACT [] xref: TAO:0007049 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000041 ! Larval:Days 21-29 -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000041 ! larval:days 21-29 +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0007050 @@ -29573,7 +29740,7 @@ def: "Dorsal subdivision of the putative mandibular muscle plate. Splits into th synonym: "constrictors dorsalis" EXACT PLURAL [] xref: TAO:0007050 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0007051 @@ -29585,7 +29752,7 @@ synonym: "ventral interhyoidei" EXACT PLURAL [] synonym: "ventral interhyoideus" EXACT [] xref: TAO:0007051 is_a: ZFA:0000521 ! hyoid muscle -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007052 @@ -29595,7 +29762,7 @@ def: "Is a ventral,paired hyoid muscle that inserts at the most anterior basibra synonym: "hyohyal" EXACT [] xref: TAO:0007052 is_a: ZFA:0000521 ! hyoid muscle -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007053 @@ -29606,7 +29773,7 @@ synonym: "dorsal adductor hyomandibulae" EXACT [] synonym: "dorsal adductors hyomandibulae" EXACT PLURAL [] xref: TAO:0007053 is_a: ZFA:0000521 ! hyoid muscle -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007054 @@ -29661,7 +29828,7 @@ synonym: "ocular vasculature" RELATED [] synonym: "optic vasculature" EXACT [] xref: TAO:0007057 is_a: ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0007058 @@ -29670,9 +29837,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the dorsal-most aspect of the developing neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0007058 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007059 @@ -29683,8 +29850,8 @@ synonym: "neurogenic fields" EXACT PLURAL [] xref: TAO:0007059 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007013 ! preplacodal ectoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007060 @@ -29694,8 +29861,8 @@ def: "Neurogenic field fated to develop into a dorsolateral placode." [GOC:ymb, synonym: "dorsolateral fields" EXACT PLURAL [] xref: TAO:0007060 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007061 @@ -29705,7 +29872,7 @@ def: "Neurogenic field fated to develop into an epibranchial placode." [GOC:ymb, synonym: "epibranchial fields" EXACT PLURAL [] xref: TAO:0007061 is_a: ZFA:0007059 ! neurogenic field -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007062 @@ -29715,8 +29882,8 @@ def: "Neurogenic field fated to develop into the olfactory placode." [GOC:ymb, O synonym: "olfactory fields" EXACT PLURAL [] xref: TAO:0007062 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000025 ! Segmentation:10-13 somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000025 ! segmentation:10-13 somites +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007063 @@ -29726,8 +29893,8 @@ def: "Cranial neural crest that is part of the hindbrain." [GOC:ymb, ORCiD:0000- synonym: "rhombencephalic neural crest" EXACT [] xref: TAO:0007063 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:51:35Z @@ -29738,9 +29905,9 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the mandibular arch." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-061108-6] xref: TAO:0007064 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:53:53Z @@ -29751,9 +29918,9 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the hyoid arch." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-061108-6] xref: TAO:0007065 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:56:12Z @@ -29764,8 +29931,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the glossopharyngeal ganglion." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0007066 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-11-04T03:39:42Z @@ -29813,7 +29980,7 @@ namespace: zebrafish_anatomy def: "Is a portion of tissue that is the most anterior portion of the notochord. The flexural organ secretes Reissner's fiber-related proteins, including F-spondin." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-120709-5] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2012-07-18T02:12:26Z @@ -29835,7 +30002,7 @@ def: "An enlarged chamber in the blood sinus capable of accumulating a large vol synonym: "blood sinus lumen" EXACT [] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0007072 ! blood sinus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2014-10-24T02:14:28Z @@ -29846,7 +30013,7 @@ namespace: zebrafish_anatomy def: "Is a three-chambered blood sinus found at the base of the maxillary barbel. Responsible, in part, for the movement of the maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140816-6] is_a: ZFA:0007072 ! blood sinus relationship: part_of ZFA:0001267 ! cranial vasculature -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:18:03Z @@ -29857,7 +30024,7 @@ namespace: zebrafish_anatomy def: "Is a multi-tissue structure forming the smallest chamber of the maxillary barbel blood sinus. It projects into the barbel shaft and has a blood filled lumen, into which extend irregular septa of vascular smooth muscle cells. Additional smooth muscle cells surround the lumen and attach the bulb to the barbel core. Circumferential to the core, there is a thin band of dermal tissue through with run several smaller capillaries and the barbel branch of the of the facial nerve (cranial nerve VII). The entire structure is wrapped by a glandular, stratified epithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:22:04Z @@ -29868,7 +30035,7 @@ namespace: zebrafish_anatomy def: "Is a multi-tissue structure that is located outside the maxillary barbel proper and is positioned on the lateral surface of the maxilla, medially attached to the lateral surface of the maxillary bone and is laterally is attached to a hemispheric capsule of dense connective tissue of the distal bulb. It connects with the smaller accessory chamber through a slight isthmus. It has a smooth muscle tunic from which extend luminally projecting muscular septa." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:27:58Z @@ -29879,7 +30046,7 @@ namespace: zebrafish_anatomy def: "Is a multi-tissue structure part of the maxillary barbel blood sinus which is connected to the central chamber of the maxillary blood sinus by a slight isthmus. It is not muscularized, has no dense connective tissue capsule and is not attached to adjacent bone. Is composed of dark tunica intima wrapped by thick, light tunica adventitia; cells within the adventitia are widely separated, with extended cytoplasmic veils. External to the adventitia, a branch of the facial nerve and several smaller nerve bundles appear in cross section just lateral to the isthmus. These nerves are in the dermis, but outside the sinus." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:34:40Z @@ -29891,7 +30058,7 @@ def: "A blind end lymph vessel that emerges from the maxilla, wraps around the s synonym: "dorsal maxillary barbel lymph vessel" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:41:22Z @@ -29903,7 +30070,7 @@ def: "Blood vessel that emerges from the maxilla, wraps around the sinus isthmus synonym: "ventral maxillary barbel blood vessel" EXACT [] is_a: ZFA:0005314 ! blood vessel relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:46:19Z @@ -29914,7 +30081,7 @@ namespace: zebrafish_anatomy def: "Is a vasculature that delivers fluid to the maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1] is_a: ZFA:0005249 ! vasculature relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:52:05Z @@ -29933,9 +30100,9 @@ name: neural plate border namespace: zebrafish_anatomy def: "Region of the neural plate that will give rise to the neural crest. The neural plate border includes progenitors for the dorsal neural tube, the neural crest, and placodes. It is a broad competence domain, established between neural and non-neural ectoderm within which subtle and sequential cell autonomous and non-cell autonomous molecular interactions will progressively define the neural crest fate from adjacent dorsal neural fates." [GOC:ymb, ORCiD:0000-0002-9900-7880, PMID:22305800] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly created_by: yvonne creation_date: 2016-01-28T08:43:28Z @@ -29945,7 +30112,7 @@ name: premigratory neural crest namespace: zebrafish_anatomy def: "Premigratory neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-01-28T09:06:50Z @@ -29954,10 +30121,11 @@ id: ZFA:0007084 name: premigratory neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory neural crest cells" EXACT PLURAL [] xref: CL:0007004 is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0007083 ! premigratory neural crest created_by: yvonne creation_date: 2016-01-28T09:29:06Z @@ -29969,8 +30137,8 @@ namespace: zebrafish_anatomy def: "Migratory neural crest population that develops from premigratory neural crest. This group of neural crest has undergone ectomesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000045 ! neural crest relationship: develops_from ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-01-28T12:04:14Z @@ -29979,13 +30147,14 @@ id: ZFA:0007086 name: migratory neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory neural crest population. Migratory neural crest cells develop from premigratory neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory neural crest cells" EXACT PLURAL [] xref: CL:0000333 is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0007084 ! premigratory neural crest cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0007085 ! migratory neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-01-28T01:35:09Z @@ -30007,8 +30176,8 @@ namespace: zebrafish_anatomy def: "Premigratory cranial neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001194 ! cranial neural crest is_a: ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-07T03:27:33Z @@ -30017,9 +30186,10 @@ id: ZFA:0007089 name: embryonic cell namespace: zebrafish_anatomy def: "A cell of the embryo." [CL:curator] +subset: cell_slim xref: CL:0002321 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin created_by: yvonne creation_date: 2016-03-30T01:24:36Z @@ -30028,10 +30198,11 @@ id: ZFA:0007090 name: premigratory cranial neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory cranial neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory cranial neural crest cells" EXACT PLURAL [] is_a: ZFA:0007084 ! premigratory neural crest cell is_a: ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007088 ! premigratory cranial neural crest created_by: yvonne creation_date: 2016-03-31T12:37:58Z @@ -30041,11 +30212,12 @@ id: ZFA:0007091 name: migratory cranial neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory cranial neural crest population. Migratory cranial neural crest cells develop from premigratory cranial neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory cranial neural crest cells" EXACT PLURAL [] xref: CL:0000008 is_a: ZFA:0007086 ! migratory neural crest cell relationship: develops_from ZFA:0007090 ! premigratory cranial neural crest cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007087 ! migratory cranial neural crest created_by: yvonne creation_date: 2016-03-31T12:43:55Z @@ -30057,8 +30229,8 @@ namespace: zebrafish_anatomy def: "Premigratory trunk neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001024 ! trunk neural crest is_a: ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000030 ! pharyngula:prim-15 +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:03:25Z @@ -30070,7 +30242,7 @@ def: "Migratory trunk neural crest population that develops from premigratory tr is_a: ZFA:0001024 ! trunk neural crest is_a: ZFA:0007085 ! migratory neural crest relationship: develops_from ZFA:0007092 ! premigratory trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:11:09Z @@ -30079,10 +30251,11 @@ id: ZFA:0007094 name: premigratory trunk neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory trunk neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory trunk neural crest cells" EXACT PLURAL [] is_a: ZFA:0007084 ! premigratory neural crest cell is_a: ZFA:0009004 ! trunk neural crest cell -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0007092 ! premigratory trunk neural crest created_by: yvonne creation_date: 2016-03-31T01:18:04Z @@ -30092,11 +30265,12 @@ id: ZFA:0007095 name: migratory trunk neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory trunk neural crest population. Migratory trunk neural crest cells develop from premigratory trunk neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory trunk neural crest cells" EXACT PLURAL [] xref: CL:0000011 is_a: ZFA:0007086 ! migratory neural crest cell relationship: develops_from ZFA:0007094 ! premigratory trunk neural crest cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0007093 ! migratory trunk neural crest created_by: yvonne creation_date: 2016-03-31T01:22:09Z @@ -30269,7 +30443,7 @@ name: anatomical conduit namespace: zebrafish_anatomy def: "An anatomical structure that is an opening or tube that connects two distinct anatomical spaces." [GOC:ymb, ORCid:0000-0002-9900-7880] is_a: ZFA:0000037 ! anatomical structure -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2018-03-23T11:46:06Z @@ -30298,8 +30472,8 @@ namespace: zebrafish_anatomy def: "Joint between Meckel's cartilage and palatoquadrate cartilage." [GOC:ymb, ORCid:0000-0002-9900-7880, ZFIN:ZDB-PUB-151122-6] synonym: "jaw joint" EXACT [] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Yvonne creation_date: 2019-04-05T15:06:57Z @@ -30311,7 +30485,7 @@ def: "The vertebral body end plate is part of the autocentrum. The anterior and synonym: "vertebral body endplate" EXACT [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000126 ! centrum -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Yvonne creation_date: 2019-04-08T12:21:06Z @@ -30323,7 +30497,7 @@ def: "Ligament that connects adjacent vertebra. The intervertebral ligament (IVL synonym: "IVL" EXACT [] is_a: ZFA:0001675 ! ligament relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Yvonne creation_date: 2019-04-08T13:27:22Z @@ -30332,6 +30506,7 @@ id: ZFA:0007120 name: cerebrospinal fluid contacting neuron namespace: zebrafish_anatomy def: "Spinal cord interneuron located along the central canal that extends a microvilliated apical process into the cerebrospinal fluid and extends ascending axonal projections ventrally and ipsilaterally. CSF-cNs are GABAergic neurons that express PKD2L1 (TRPP3) channels and have been shown to be chemosensory and mechanosensory, responding to pH and osmolarity changes as well as mechanical stimuli associated with tail bending. CSF-cNs originate from two distinct progenitor domains, p3 and pMN. CSF-cNs project onto caudal primary (CaP motor neurons) and commissural primary ascending (CoPA) sensory interneurons within the escape circuit as well as onto V0-v interneurons within the slow swimming circuit." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-170409-2] +subset: cell_slim synonym: "CSF-cN" EXACT [ZFIN:ZDB-PUB-170409-2] synonym: "CSF-cNs" EXACT PLURAL [ZFIN:ZDB-PUB-170409-2] is_a: ZFA:0000778 ! spinal cord interneuron @@ -30345,6 +30520,7 @@ id: ZFA:0007121 name: ventral cerebrospinal fluid contacting neuron namespace: zebrafish_anatomy def: "A cerebrospinal fluid contacting neuron that originates form p3 progenitor domain. The apical extension of ventral CSF-cNs are more compact than that of dorsal CSF-cNs. Ventral CSF-cNs synapse with CaP motor neurons and project onto CoPA sensory interneurons. Ventral CSF-cNs respond to longitudinal contractions of the spinal cord. Frequently called KA\" neurons." [GOC:ymb, ORDiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-170409-2] +subset: cell_slim synonym: "KA 2" RELATED [] synonym: "ventral CSF-cN" EXACT [ZFIN:ZDB-PUB-170409-2] synonym: "ventral CSF-cNs" EXACT PLURAL [ZFIN:ZDB-PUB-170409-2] @@ -30357,6 +30533,7 @@ id: ZFA:0007122 name: epidermal stem cell namespace: zebrafish_anatomy def: "A stem cell that gives rise to several epidermal cell types, including ionocytes and keratinocytes." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "" RELATED [] xref: CL:1000428 is_a: ZFA:0009020 ! multi fate stem cell @@ -30368,10 +30545,11 @@ id: ZFA:0007123 name: ionocyte progenitor cell namespace: zebrafish_anatomy def: "A cell that will become an ionocyte. Ionocyte progenitor cells develop from epidermal stem cells in the ventral ectoderm that are DeltaC and Tp63 positive." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-190402-19] +subset: cell_slim synonym: "ionocyte progenitor cells" EXACT PLURAL [] is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0007122 ! epidermal stem cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T14:01:21Z @@ -30380,10 +30558,11 @@ id: ZFA:0007124 name: keratinocyte progenitor cell namespace: zebrafish_anatomy def: "A cell that will become a keratinocyte. Keratinocyte progenitor cells develop from epidermal stem cells in the ventral ectoderm that are DeltaC negative and Tp63 positive." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-190402-19] +subset: cell_slim synonym: "keratinocyte progenitor cells" EXACT PLURAL [] is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0007122 ! epidermal stem cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T14:12:30Z @@ -30395,7 +30574,7 @@ def: "A portion of tissue that is the deepest point of the fold of the midbrain synonym: "MHBC" EXACT [ZFIN:ZDB-PUB-080825-24] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Yvonne creation_date: 2020-03-04T12:35:25Z @@ -30432,7 +30611,7 @@ synonym: "early embryonic cells" EXACT PLURAL [] xref: CL:0000007 xref: TAO:0009002 is_a: ZFA:0007089 ! embryonic cell -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0009003 @@ -30442,9 +30621,9 @@ def: "A cell of the cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] subset: cell_slim synonym: "cranial neural crest cells" EXACT PLURAL [] is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001194 ! cranial neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009004 @@ -30455,7 +30634,7 @@ subset: cell_slim synonym: "trunk neural crest cells" EXACT PLURAL [] is_a: ZFA:0009165 ! neural crest cell relationship: part_of ZFA:0001024 ! trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009005 @@ -30469,7 +30648,7 @@ xref: TAO:0009005 is_a: ZFA:0009016 ! germ line cell relationship: develops_from ZFA:0009007 ! spermatogonium relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0009006 @@ -30507,7 +30686,7 @@ xref: CL:0000029 xref: TAO:0009009 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009010 @@ -30520,8 +30699,8 @@ xref: TAO:0009010 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009011 @@ -30542,7 +30721,7 @@ synonym: "neuroplacodal cells" EXACT PLURAL [] xref: CL:0000032 xref: TAO:0009012 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009013 @@ -30570,7 +30749,7 @@ xref: TAO:0009014 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009258 ! angioblastic mesenchymal cell relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009015 @@ -30599,7 +30778,7 @@ synonym: "germ line cells" EXACT PLURAL [] xref: CL:0000039 xref: TAO:0009016 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009017 @@ -30694,7 +30873,7 @@ xref: CL:0000051 xref: TAO:0009023 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009024 @@ -30718,8 +30897,8 @@ xref: CL:0000056 xref: TAO:0009025 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009179 ! muscle stem cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009026 @@ -30733,7 +30912,7 @@ xref: CL:0000057 xref: TAO:0009026 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009027 @@ -30747,9 +30926,9 @@ xref: TAO:0009027 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001501 ! cartilage element -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009028 @@ -30762,7 +30941,7 @@ xref: CL:0000059 xref: TAO:0009028 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0005134 ! dental epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009029 @@ -30776,7 +30955,7 @@ xref: TAO:0009029 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: part_of ZFA:0005141 ! tooth pulp -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009030 @@ -30789,7 +30968,7 @@ xref: CL:0000061 xref: TAO:0009030 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009031 @@ -30803,7 +30982,7 @@ xref: TAO:0009031 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: develops_from ZFA:0009184 ! osteoprogenitor cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009032 @@ -30814,7 +30993,7 @@ synonym: "ciliated cells" EXACT PLURAL [] xref: CL:0000064 xref: TAO:0009032 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009033 @@ -30840,7 +31019,7 @@ xref: CL:0000066 xref: TAO:0009034 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0001486 ! epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009035 @@ -30876,7 +31055,7 @@ synonym: "barrier epithelial cells" EXACT PLURAL [] xref: CL:0000073 xref: TAO:0009037 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009038 @@ -30941,7 +31120,7 @@ synonym: "circulating cells" EXACT PLURAL [] xref: CL:0000080 xref: TAO:0009043 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009044 @@ -30954,7 +31133,7 @@ xref: CL:0000081 xref: TAO:0009044 is_a: ZFA:0005830 ! hematopoietic cell relationship: part_of ZFA:0000007 ! blood -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009045 @@ -31006,7 +31185,7 @@ xref: CL:0000092 xref: TAO:0009047 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009265 ! monocyte -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009048 @@ -31222,9 +31401,9 @@ subset: cell_slim xref: CL:0000116 xref: TAO:0009066 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000048 ! olfactory placode -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009067 @@ -31305,7 +31484,7 @@ xref: TAO:0009073 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009010 ! glioblast relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009074 @@ -31362,7 +31541,7 @@ is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009139 ! endodermal cell relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009079 @@ -31388,7 +31567,7 @@ xref: CL:0000133 xref: TAO:0009080 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009137 ! ectodermal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009081 @@ -31401,7 +31580,7 @@ xref: CL:0000134 xref: TAO:0009081 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009082 @@ -31420,7 +31599,7 @@ xref: TAO:0009208 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: part_of ZFA:0005345 ! adipose tissue -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0009083 @@ -31434,7 +31613,7 @@ xref: TAO:0009083 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009031 ! osteoblast relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009084 @@ -31473,7 +31652,7 @@ xref: TAO:0009086 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009029 ! odontoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009087 @@ -31488,7 +31667,7 @@ is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009030 ! cementoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009088 @@ -31523,7 +31702,7 @@ synonym: "chromatophore" EXACT [] xref: CL:0000147 xref: TAO:0009090 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009091 @@ -31539,7 +31718,7 @@ is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0009249 ! melanoblast relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0005915 ! iris melanophore layer -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009092 @@ -31551,7 +31730,7 @@ synonym: "exocrine cells" EXACT PLURAL [] xref: CL:0000152 xref: TAO:0009092 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009093 @@ -31574,7 +31753,7 @@ xref: CL:0000160 xref: TAO:0009094 is_a: ZFA:0009159 ! mucus secreting cell relationship: part_of ZFA:0001486 ! epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009095 @@ -31585,7 +31764,7 @@ synonym: "acid secreting cells" EXACT PLURAL [] xref: CL:0000161 xref: TAO:0009095 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009096 @@ -31598,7 +31777,7 @@ xref: CL:0000163 xref: TAO:0009096 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009097 @@ -31610,7 +31789,7 @@ synonym: "enteroendocrine cells" EXACT PLURAL [] xref: CL:0000164 xref: TAO:0009097 is_a: ZFA:0009096 ! endocrine cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009098 @@ -31645,7 +31824,7 @@ synonym: "peptide hormone secreting cells" EXACT PLURAL [] xref: CL:0000167 xref: TAO:0009100 is_a: ZFA:0009096 ! endocrine cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009101 @@ -31708,7 +31887,7 @@ synonym: "steroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000174 xref: TAO:0009106 is_a: ZFA:0009096 ! endocrine cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009107 @@ -31776,7 +31955,7 @@ synonym: "perivascular cells" EXACT [] xref: CL:0000669 xref: TAO:0009112 is_a: ZFA:0005944 ! mural cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009113 @@ -31802,7 +31981,7 @@ xref: TAO:0009114 is_a: ZFA:0009190 ! electrically responsive cell relationship: develops_from ZFA:0009025 ! myoblast relationship: part_of ZFA:0005145 ! muscle -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009115 @@ -31845,7 +32024,7 @@ xref: CL:0000190 xref: TAO:0009117 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0009369 ! fast muscle myoblast -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0009118 @@ -31936,7 +32115,7 @@ xref: CL:0000207 xref: TAO:0009125 is_a: ZFA:0009124 ! chemoreceptor cell relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009126 @@ -31970,7 +32149,7 @@ synonym: "electrically active cells" EXACT PLURAL [] xref: CL:0000211 xref: TAO:0009128 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009129 @@ -31982,7 +32161,7 @@ synonym: "absorptive cells" EXACT PLURAL [] xref: CL:0000212 xref: TAO:0009129 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009130 @@ -32017,7 +32196,7 @@ synonym: "barrier cells" EXACT PLURAL [] xref: CL:0000215 xref: TAO:0009132 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009133 @@ -32030,7 +32209,7 @@ xref: CL:0000216 xref: TAO:0009133 is_a: ZFA:0009132 ! barrier cell relationship: part_of ZFA:0005882 ! spermatogenic cyst -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0009134 @@ -32056,7 +32235,7 @@ is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) is_a: ZFA:0009163 ! myelin accumulating cell relationship: develops_from ZFA:0001725 ! immature Schwann cell relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009136 @@ -32068,7 +32247,7 @@ synonym: "motile cells" EXACT PLURAL [] xref: CL:0000219 xref: TAO:0009136 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009137 @@ -32080,9 +32259,9 @@ synonym: "ectoderm cell" EXACT [] xref: CL:0000221 xref: TAO:0009137 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009138 @@ -32095,9 +32274,9 @@ synonym: "mesoderm cell" EXACT [] xref: CL:0000222 xref: TAO:0009138 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009139 @@ -32109,9 +32288,9 @@ synonym: "endoderm cell" EXACT [] xref: CL:0000223 xref: TAO:0009139 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000017 ! endoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009140 @@ -32136,7 +32315,7 @@ xref: TAO:0009141 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009265 ! monocyte -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009142 @@ -32192,7 +32371,7 @@ synonym: "Merkel cells" EXACT PLURAL [] xref: CL:0000242 xref: TAO:0009146 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009147 @@ -32205,7 +32384,7 @@ xref: CL:0000243 xref: TAO:0009147 is_a: ZFA:0009073 ! glial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009148 @@ -32229,10 +32408,10 @@ xref: CL:0000246 xref: TAO:0009149 is_a: ZFA:0005865 ! reticulospinal neuron is_a: ZFA:0009194 ! CNS short range interneuron -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009150 @@ -32247,7 +32426,7 @@ synonym: "Rohon-Beard neurons" EXACT PLURAL [] xref: CL:0000247 xref: TAO:0009150 is_a: ZFA:0009053 ! sensory neuron -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0009151 @@ -32258,7 +32437,7 @@ synonym: "hatching gland cells" EXACT PLURAL [] xref: CL:0000249 xref: TAO:0009151 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009152 @@ -32309,7 +32488,7 @@ xref: CL:0000295 xref: TAO:0009155 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009156 @@ -32322,7 +32501,7 @@ xref: CL:0000300 xref: TAO:0009156 is_a: ZFA:0009016 ! germ line cell relationship: part_of ZFA:0000413 ! gonad -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0009157 @@ -32333,7 +32512,7 @@ synonym: "keratin accumulating cells" EXACT PLURAL [] xref: CL:0000311 xref: TAO:0009157 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009158 @@ -32359,7 +32538,7 @@ xref: TAO:0009159 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009160 @@ -32370,7 +32549,7 @@ synonym: "seminal fluid secreting cells" EXACT PLURAL [] xref: CL:0000321 xref: TAO:0009160 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009161 @@ -32402,7 +32581,7 @@ synonym: "myelin accumulating cells" EXACT PLURAL [] xref: CL:0000328 xref: TAO:0009163 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009164 @@ -32413,7 +32592,7 @@ synonym: "oxygen accumulating cells" EXACT PLURAL [] xref: CL:0000329 xref: TAO:0009164 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009165 @@ -32423,9 +32602,9 @@ def: "A cell of the neural crest. The neural crest is a strip of specialized ect subset: cell_slim synonym: "neural crest cells" EXACT PLURAL [] is_a: ZFA:0007089 ! embryonic cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000045 ! neural crest -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009166 @@ -32437,7 +32616,7 @@ xref: CL:0000335 xref: TAO:0009166 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009167 @@ -32449,7 +32628,7 @@ xref: CL:0000336 xref: TAO:0009167 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009168 @@ -32469,7 +32648,7 @@ synonym: "glioblasts (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000339 xref: TAO:0009169 is_a: ZFA:0009010 ! glioblast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009170 @@ -32480,7 +32659,7 @@ synonym: "pigment cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000342 xref: TAO:0009170 is_a: ZFA:0009090 ! pigment cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009171 @@ -32492,7 +32671,7 @@ xref: CL:0000343 xref: TAO:0009171 is_a: ZFA:0009170 ! pigment cell (sensu Vertebrata) relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009172 @@ -32516,7 +32695,7 @@ xref: TAO:0009173 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: part_of ZFA:0005140 ! dental papilla -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009174 @@ -32530,7 +32709,7 @@ xref: TAO:0009174 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: part_of ZFA:0005563 ! sclera -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009175 @@ -32543,7 +32722,7 @@ xref: CL:0000348 xref: TAO:0009175 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009176 @@ -32554,7 +32733,7 @@ synonym: "extraembryonic cells" EXACT PLURAL [] xref: CL:0000349 xref: TAO:0009176 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009177 @@ -32567,7 +32746,7 @@ xref: CL:0000353 xref: TAO:0009177 is_a: ZFA:0009002 ! early embryonic cell relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0009178 @@ -32589,7 +32768,7 @@ xref: CL:0000355 xref: TAO:0009179 is_a: ZFA:0009013 ! single fate stem cell is_a: ZFA:0009291 ! muscle precursor cell -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009180 @@ -32600,7 +32779,7 @@ synonym: "stratified epithelial stem cells" EXACT PLURAL [] xref: CL:0000357 xref: TAO:0009180 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009181 @@ -32623,8 +32802,8 @@ synonym: "gastrula cells" EXACT PLURAL [] xref: CL:0000361 xref: TAO:0009182 is_a: ZFA:0009002 ! early embryonic cell -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0009183 @@ -32689,7 +32868,7 @@ xref: CL:0000384 xref: TAO:0009188 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0001675 ! ligament -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009189 @@ -32700,7 +32879,7 @@ synonym: "muscle attachment cell" EXACT [] xref: CL:0000388 xref: TAO:0009189 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009190 @@ -32778,7 +32957,7 @@ xref: TAO:0009198 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005245 ! xanthoblast relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0009199 @@ -32796,7 +32975,7 @@ relationship: develops_from ZFA:0005328 ! iridoblast relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0005914 ! argentum relationship: part_of ZFA:0005916 ! tapetum lucidum -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0009200 @@ -32817,7 +32996,7 @@ synonym: "alkali secreting cells" EXACT PLURAL [] xref: CL:0000435 xref: TAO:0009201 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009202 @@ -32863,7 +33042,7 @@ xref: CL:0000439 xref: TAO:0009204 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: part_of ZFA:0005580 ! rostral pars anterior -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009205 @@ -32877,7 +33056,7 @@ xref: CL:0000440 xref: TAO:0009205 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: part_of ZFA:0001197 ! pars intermedia -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009206 @@ -32919,7 +33098,7 @@ synonym: "thyroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000452 xref: TAO:0009210 is_a: ZFA:0009096 ! endocrine cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009211 @@ -32940,7 +33119,7 @@ synonym: "biogenic amine secreting cells" EXACT PLURAL [] xref: CL:0000457 xref: TAO:0009212 is_a: ZFA:0009096 ! endocrine cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009213 @@ -32989,7 +33168,7 @@ xref: CL:0000467 xref: TAO:0009216 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: part_of ZFA:0005580 ! rostral pars anterior -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009217 @@ -33001,7 +33180,7 @@ xref: CL:0000470 xref: TAO:0009217 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009218 @@ -33016,7 +33195,7 @@ xref: CL:0000476 xref: TAO:0009218 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009219 @@ -33099,7 +33278,7 @@ xref: CL:0000499 xref: TAO:0009226 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009227 @@ -33176,7 +33355,7 @@ synonym: "paracrine cells" EXACT PLURAL [] xref: CL:0000512 xref: TAO:0009233 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009234 @@ -33188,7 +33367,7 @@ synonym: "cardioblast" RELATED [] xref: CL:0000513 xref: TAO:0009234 is_a: ZFA:0009025 ! myoblast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009235 @@ -33200,7 +33379,7 @@ synonym: "satellite cell" RELATED [] xref: CL:0000514 xref: TAO:0009235 is_a: ZFA:0009025 ! myoblast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009236 @@ -33212,7 +33391,7 @@ synonym: "skeletal muscle myoblasts" EXACT PLURAL [] xref: CL:0000515 xref: TAO:0009236 is_a: ZFA:0009025 ! myoblast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009237 @@ -33280,7 +33459,7 @@ subset: cell_slim xref: CL:0000530 xref: TAO:0009242 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001120 ! neuroectoderm [Term] @@ -33307,7 +33486,7 @@ xref: CL:0000533 xref: TAO:0009244 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown [Term] id: ZFA:0009245 @@ -33319,8 +33498,8 @@ xref: CL:0000534 xref: TAO:0009245 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009246 @@ -33344,8 +33523,8 @@ xref: CL:0000536 xref: TAO:0009247 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009246 ! secondary neuron -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009248 @@ -33360,7 +33539,7 @@ is_a: ZFA:0009190 ! electrically responsive cell is_a: ZFA:0009193 ! electrically signaling cell relationship: develops_from ZFA:0009011 ! neuroblast relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009249 @@ -33373,8 +33552,8 @@ xref: CL:0000541 xref: TAO:0009249 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009250 @@ -33480,7 +33659,7 @@ xref: CL:0000564 xref: TAO:0009257 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009018 ! neutrophilic myeloblast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009258 @@ -33505,7 +33684,7 @@ xref: TAO:0009259 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009260 @@ -33517,7 +33696,7 @@ xref: CL:0000570 xref: TAO:0009260 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009261 @@ -33532,7 +33711,7 @@ xref: TAO:0009261 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005329 ! leucoblast relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009262 @@ -33557,7 +33736,7 @@ xref: TAO:0009263 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005331 ! pigment erythroblast relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009264 @@ -33714,7 +33893,7 @@ synonym: "acinar cells" EXACT PLURAL [] xref: CL:0000622 xref: TAO:0009277 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009278 @@ -33766,7 +33945,7 @@ xref: CL:0000642 xref: TAO:0009281 is_a: ZFA:0009096 ! endocrine cell relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009282 @@ -33788,7 +33967,7 @@ xref: CL:0000650 xref: TAO:0009283 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009284 @@ -33811,7 +33990,7 @@ xref: CL:0000653 xref: TAO:0009285 is_a: ZFA:0009034 ! epithelial cell relationship: part_of ZFA:0000163 ! renal system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009286 @@ -33845,9 +34024,9 @@ xref: CL:0000670 xref: TAO:0009288 is_a: ZFA:0009016 ! germ line cell is_a: ZFA:0009136 ! motile cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0009289 @@ -33860,7 +34039,7 @@ xref: CL:0000677 xref: TAO:0009289 is_a: ZFA:0009129 ! absorptive cell relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009290 @@ -33883,8 +34062,8 @@ xref: TAO:0009291 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009292 @@ -33898,8 +34077,8 @@ xref: TAO:0009292 is_a: ZFA:0009168 ! neuroblast (sensu Vertebrata) relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009293 @@ -33967,7 +34146,7 @@ xref: TAO:0009298 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009073 ! glial cell relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009299 @@ -34012,7 +34191,7 @@ synonym: "sustentacular cells" EXACT PLURAL [] xref: CL:0000703 xref: TAO:0009302 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009303 @@ -34059,20 +34238,19 @@ xref: CL:0000710 xref: TAO:0009306 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009307 name: somatic stem cell namespace: zebrafish_anatomy -def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:CJM] +def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:cjm] comment: Definition originally referred to GO:0048103. Changed to GOC: CJM to match other references. subset: cell_slim synonym: "somatic stem cells" EXACT PLURAL [] xref: CL:0000723 xref: TAO:0009307 -is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +is_a: ZFA:0005957 ! stem cell [Term] id: ZFA:0009308 @@ -34195,7 +34373,7 @@ xref: TAO:0009317 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005332 ! cyanoblast relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009318 @@ -34611,7 +34789,7 @@ xref: TAO:0009350 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor relationship: part_of ZFA:0001078 ! thymus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009351 @@ -34764,7 +34942,7 @@ xref: CL:0000851 xref: TAO:0009362 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009363 @@ -34777,7 +34955,7 @@ xref: CL:0000852 xref: TAO:0009363 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009364 @@ -34789,7 +34967,7 @@ synonym: "olfactory sustentacular cell" EXACT [] xref: CL:0000853 xref: TAO:0009364 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009365 @@ -34802,9 +34980,9 @@ xref: CL:0000854 xref: TAO:0009365 is_a: ZFA:0009080 ! neurectodermal cell relationship: develops_from ZFA:0009012 ! neuroplacodal cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009366 @@ -34928,7 +35106,7 @@ subset: cell_slim xref: CL:0002538 is_a: ZFA:0009372 ! duct epithelial cell relationship: part_of ZFA:0005169 ! intrahepatic bile duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-07-29T05:21:19Z @@ -34941,7 +35119,7 @@ subset: cell_slim xref: CL:0002079 is_a: ZFA:0009372 ! duct epithelial cell relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2013-07-29T05:23:07Z @@ -34989,7 +35167,7 @@ def: "A cell of an organism that does not pass on its genetic material to the or subset: cell_slim xref: CL:0002371 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009387 @@ -34999,7 +35177,7 @@ def: "A cell whose primary function is to support other cell types." [FB:ma, GOC subset: cell_slim xref: CL:0000630 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009388 @@ -35022,7 +35200,7 @@ subset: cell_slim xref: CL:1000497 is_a: ZFA:0009386 ! somatic cell relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0009390 @@ -35117,8 +35295,8 @@ def: "Multi fate stem cell that gives rise to both hepatocytes and cholangiocyte subset: cell_slim is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0000124 ! liver primordium -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-08-02T12:13:12Z @@ -35131,7 +35309,7 @@ subset: cell_slim xref: CL:0002563 is_a: ZFA:0009383 ! endo-epithelial cell relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2013-08-02T04:26:27Z @@ -35144,7 +35322,7 @@ subset: cell_slim xref: CL:0002252 is_a: ZFA:0009383 ! endo-epithelial cell relationship: part_of ZFA:0000204 ! esophagus -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2013-08-02T04:32:14Z @@ -35153,10 +35331,11 @@ id: ZFA:0009401 name: lens fiber cell namespace: zebrafish_anatomy def: "A vertebrate lens cell that is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye." [GOC:nv] +subset: cell_slim xref: CL:0011004 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-09-01T15:46:37Z @@ -35169,7 +35348,7 @@ subset: cell_slim xref: CL:1000147 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0005065 ! heart valve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-08T09:32:56Z @@ -35186,10 +35365,11 @@ creation_date: 2020-12-08T09:43:48Z [Term] id: ZFA:0009404 -name: heart valve endothelial cells +name: heart valve endothelial cell namespace: zebrafish_anatomy def: "Endothelial cells that surround the heart valve extracellular matrix." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191202-2] subset: cell_slim +synonym: "heart valve endocardial cell" EXACT [ZFIN:ZDB-PUB-200221-32] synonym: "VEC" RELATED [ZFIN:ZDB-PUB-191202-2] is_a: ZFA:0009402 ! heart valve cell created_by: ceriv @@ -35202,367 +35382,466 @@ namespace: zebrafish_anatomy [Term] id: ZFS:0000000 -name: Unknown +name: unknown namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-050211-1 xref: ZFIN:ZDB-TERM-100331-2430 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage [Term] id: ZFS:0000001 -name: Zygote:1-cell +name: zygote:1-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-4 xref: ZFIN:ZDB-TERM-100331-2431 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage [Term] id: ZFS:0000002 -name: Cleavage:2-cell +name: cleavage:2-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-15 xref: ZFIN:ZDB-TERM-100331-2432 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000003 -name: Cleavage:4-cell +name: cleavage:4-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-11 xref: ZFIN:ZDB-TERM-100331-2433 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000004 -name: Cleavage:8-cell +name: cleavage:8-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-33 xref: ZFIN:ZDB-TERM-100331-2434 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000005 -name: Cleavage:16-cell +name: cleavage:16-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-20 xref: ZFIN:ZDB-TERM-100331-2435 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000006 -name: Cleavage:32-cell +name: cleavage:32-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-25 xref: ZFIN:ZDB-TERM-100331-2436 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000007 -name: Cleavage:64-cell +name: cleavage:64-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-28 xref: ZFIN:ZDB-TERM-100331-2437 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000008 -name: Blastula:128-cell +name: blastula:128-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-7 xref: ZFIN:ZDB-TERM-100331-2438 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000009 -name: Blastula:256-cell +name: blastula:256-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-1 xref: ZFIN:ZDB-TERM-100331-2439 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000010 -name: Blastula:512-cell +name: blastula:512-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-14 xref: ZFIN:ZDB-TERM-100331-2440 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000011 -name: Blastula:1k-cell +name: blastula:1k-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-22 xref: ZFIN:ZDB-TERM-100331-2441 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000012 -name: Blastula:High +name: blastula:high namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-27 xref: ZFIN:ZDB-TERM-100331-2442 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000013 -name: Blastula:Oblong +name: blastula:oblong namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-24 xref: ZFIN:ZDB-TERM-100331-2443 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000014 -name: Blastula:Sphere +name: blastula:sphere namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-21 xref: ZFIN:ZDB-TERM-100331-2444 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000015 -name: Blastula:Dome +name: blastula:dome namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-19 xref: ZFIN:ZDB-TERM-100331-2445 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000016 -name: Blastula:30%-epiboly +name: blastula:30%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-17 xref: ZFIN:ZDB-TERM-100331-2446 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000017 -name: Gastrula:50%-epiboly +name: gastrula:50%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-6 xref: ZFIN:ZDB-TERM-100331-2447 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000018 -name: Gastrula:Germ-ring +name: gastrula:germ-ring namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-3 xref: ZFIN:ZDB-TERM-100331-2448 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000019 -name: Gastrula:Shield +name: gastrula:shield namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-2 xref: ZFIN:ZDB-TERM-100331-2449 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000020 -name: Gastrula:75%-epiboly +name: gastrula:75%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-18 xref: ZFIN:ZDB-TERM-100331-2450 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000021 -name: Gastrula:90%-epiboly +name: gastrula:90%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-29 xref: ZFIN:ZDB-TERM-100331-2451 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000022 -name: Gastrula:Bud +name: gastrula:bud namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-12 xref: ZFIN:ZDB-TERM-100331-2452 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000023 -name: Segmentation:1-4 somites +name: segmentation:1-4 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-23 xref: ZFIN:ZDB-TERM-100331-2453 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000024 -name: Segmentation:5-9 somites +name: segmentation:5-9 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-5 xref: ZFIN:ZDB-TERM-100331-2454 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000025 -name: Segmentation:10-13 somites +name: segmentation:10-13 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-020626-1 xref: ZFIN:ZDB-TERM-100331-2455 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000026 -name: Segmentation:14-19 somites +name: segmentation:14-19 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-30 xref: ZFIN:ZDB-TERM-100331-2456 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000027 -name: Segmentation:20-25 somites +name: segmentation:20-25 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-16 xref: ZFIN:ZDB-TERM-100331-2457 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000028 -name: Segmentation:26+ somites +name: segmentation:26+ somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-34 xref: ZFIN:ZDB-TERM-100331-2458 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000029 -name: Pharyngula:Prim-5 +name: pharyngula:prim-5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-10 xref: ZFIN:ZDB-TERM-100331-2439 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000030 -name: Pharyngula:Prim-15 +name: pharyngula:prim-15 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-32 xref: ZFIN:ZDB-TERM-100331-2460 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000031 -name: Pharyngula:Prim-25 +name: pharyngula:prim-25 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-13 xref: ZFIN:ZDB-TERM-100331-2461 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000032 -name: Pharyngula:High-pec +name: pharyngula:high-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-31 xref: ZFIN:ZDB-TERM-100331-2462 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000033 -name: Hatching:Long-pec +name: hatching:long-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-9 xref: ZFIN:ZDB-TERM-100331-2463 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0007000 ! hatching [Term] id: ZFS:0000034 -name: Hatching:Pec-fin +name: hatching:pec-fin namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-26 xref: ZFIN:ZDB-TERM-100331-2464 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0007000 ! hatching [Term] id: ZFS:0000035 -name: Larval:Protruding-mouth +name: larval:protruding-mouth namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-8 xref: ZFIN:ZDB-TERM-100331-2465 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000036 -name: Larval:Day 4 +name: larval:day 4 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-35 xref: ZFIN:ZDB-TERM-100331-2466 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000037 -name: Larval:Day 5 +name: larval:day 5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-36 xref: ZFIN:ZDB-TERM-100331-2467 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000038 -name: Larval:Day 6 +name: larval:day 6 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-37 xref: ZFIN:ZDB-TERM-100331-2468 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000039 -name: Larval:Days 7-13 +name: larval:days 7-13 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-47 xref: ZFIN:ZDB-TERM-100331-2469 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000040 -name: Larval:Days 14-20 +name: larval:days 14-20 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-48 xref: ZFIN:ZDB-TERM-100331-2470 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000041 -name: Larval:Days 21-29 +name: larval:days 21-29 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-49 xref: ZFIN:ZDB-TERM-100331-2471 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000042 -name: Juvenile:Days 30-44 +name: juvenile:days 30-44 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-51 xref: ZFIN:ZDB-TERM-100331-2472 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000051 ! juvenile [Term] id: ZFS:0000043 -name: Juvenile:Days 45-89 +name: juvenile:days 45-89 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-52 xref: ZFIN:ZDB-TERM-100331-2473 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000051 ! juvenile [Term] id: ZFS:0000044 -name: Adult +name: adult namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-39 xref: ZFIN:ZDB-TERM-100331-2474 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage + +[Term] +id: ZFS:0000045 +name: blastula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000046 ! cleavage + +[Term] +id: ZFS:0000046 +name: cleavage +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage + +[Term] +id: ZFS:0000047 +name: gastrula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000045 ! blastula + +[Term] +id: ZFS:0000048 +name: larva +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0007000 ! hatching + +[Term] +id: ZFS:0000049 +name: segmentation +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000047 ! gastrula + +[Term] +id: ZFS:0000050 +name: pharyngula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000049 ! segmentation + +[Term] +id: ZFS:0000051 +name: juvenile +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000048 ! larva + +[Term] +id: ZFS:0007000 +name: hatching +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000050 ! pharyngula +created_by: yvonne +creation_date: 2014-11-05T08:33:09Z [Term] id: ZFS:0100000 -name: Stages +name: zebrafish stage namespace: zebrafish_stages [Typedef] @@ -35604,6 +35883,13 @@ xref: BFO:0000051 is_transitive: true is_a: overlaps ! overlaps +[Typedef] +id: immediately_preceded_by +name: immediately_preceded_by +def: "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y)." [goc:cjm] +xref: RO:0002087 +is_a: preceded_by ! preceded_by + [Typedef] id: overlaps name: overlaps @@ -35617,6 +35903,13 @@ is_transitive: true is_a: overlaps ! overlaps inverse_of: has_part ! has_part +[Typedef] +id: preceded_by +name: preceded_by +def: "X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X)." [goc:cjm] +xref: BFO:0000062 +is_transitive: true + [Typedef] id: start name: start stage diff --git a/zfa-full.owl b/zfa-full.owl index 551b0c4..198e1ae 100644 --- a/zfa-full.owl +++ b/zfa-full.owl @@ -12,21 +12,22 @@ xmlns:terms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + + + ZFA description. Zebrafish Anatomy Ontology (ZFA) - OBO-Edit 2.3.1 - 08:03:2021 11:16 + OBO-Edit 2.3-beta5 + 29:11:2022 16:29 zebrafish_anatomical_ontology 1.2 - ceriv + zfinf CARO part_of NCBITaxon:7955 CL part_of NCBITaxon:7955 TAO part_of NCBITaxon:7955 VSAO part_of NCBITaxon:7955 - SVN version: $Revision: 1.100$ - 2022-03-15 + 2022-12-09 @@ -302,6 +303,46 @@ + + + + + X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X). + BFO:0000062 + zebrafish_anatomical_ontology + preceded_by + preceded_by + preceded_by + + + + + X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X). + goc:cjm + + + + + + + + + X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y). + RO:0002087 + zebrafish_anatomical_ontology + immediately_preceded_by + immediately_preceded_by + immediately_preceded_by + + + + + X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y). + goc:cjm + + + + @@ -7002,7 +7043,7 @@ Brain structure which is one of three parts of the cerebellum and is the entry point for a posterior cerebellar tract that carries cerebellar afferents from many brain stem nuclei. From Neuroanatomy of the Zebrafish Brain. TAO:0000188 cerebellar corpus - corpus cerebelli granular layer + corpus cerebelli granular layer corpus cerebellum zebrafish_anatomy ZFA:0000188 @@ -7019,7 +7060,7 @@ - corpus cerebelli granular layer + corpus cerebelli granular layer ZFIN:ZDB-PUB-961014-1280 @@ -9349,7 +9390,7 @@ One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -10190,7 +10231,7 @@ Paired, deep caudal fin muscles that originate from the 30th vertebra and extend toward the dorsal base of the caudal fin where they insert broadly on fin rays. TAO:0000287 - flexor caudalis dorsalis superioris + flexor caudalis dorsalis superioris superior dorsal flexor zebrafish_anatomy CDS @@ -11902,7 +11943,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -13473,7 +13514,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -14299,7 +14340,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -14875,7 +14916,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:JCN 421-:189-198 + ZFIN:ZDB-PUB-000523-3 @@ -15119,7 +15160,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Portion of tissue, located on the upper jaw that defines the caudal extent of the labial cavity. The oral valves control the flow of water into the mouth during routine respiration. TAO:0000451 maxillary valve - upper semilunar valve + upper semilunar valve zebrafish_anatomy breathing valve buccal valve @@ -15136,7 +15177,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. - upper semilunar valve + upper semilunar valve ZFIN:ZDB-PUB-060921-12 @@ -15510,7 +15551,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -16608,7 +16649,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Mandibular muscle that inserts along the dorsolateral faces of the opercles. Responsible for opercular abduction. TAO:0000498 - dilatator opercula + dilatator opercula zebrafish_anatomy dilator opercula dilators operculi @@ -17004,7 +17045,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. LVII lobus facialis zebrafish_anatomy - tuberculum impar of Herrick + tuberculum impar of Herrick ZFA:0000512 facial lobe @@ -17423,7 +17464,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -18174,7 +18215,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000549 postemporal zebrafish_anatomy - post-temporal + post-temporal ZFA:0000549 posttemporal @@ -19627,7 +19668,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000588 auditory ganglion gVIII - octaval ganglion + octaval ganglion sag statoacoustic ganglia zebrafish_anatomy @@ -19979,7 +20020,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Multi-tissue structure that is part of the midbrain and develops from the alar plate. The torus semicircularis is located dorsal to the lateral tegmentum where it extends into the medial tectal ventricle and receives ascending sensory octavolateralis input. TAO:0000599 - semicircular torus + semicircular torus zebrafish_anatomy ZFA:0000599 torus semicircularis @@ -20224,7 +20265,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000608 transverse ventralis - transversus ventralis + transversus ventralis zebrafish_anatomy ZFA:0000608 ventral transverse @@ -27114,7 +27155,7 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - Portion of somite 16 that gives rise to body wall muscle masses. + Portion of somite 26 that gives rise to body wall muscle masses. TAO:0000807 zebrafish_anatomy ZFA:0000807 @@ -27124,7 +27165,7 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - Portion of somite 16 that gives rise to body wall muscle masses. + Portion of somite 26 that gives rise to body wall muscle masses. GOC:ymb ORCiD:0000-0002-9900-7880 ZFIN:ZDB-PUB-961014-576 @@ -32187,19 +32228,22 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) TAO:0000944 pll zebrafish_anatomy + midbody lateral line + midtrunk line ZFA:0000944 posterior lateral line - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 + ZFIN:ZDB-PUB-110811-14 @@ -45017,7 +45061,7 @@ The ciliary "body" does not contain processes or a cumferential band o tunica muscularis - http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html + http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html @@ -61747,7 +61791,7 @@ The epithelium exists before becoming folded into the rosette. - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) TAO:0005112 dorsal lateral lines zebrafish_anatomy @@ -61757,9 +61801,10 @@ The epithelium exists before becoming folded into the rosette. - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 + ZFIN:ZDB-PUB-070907-34 @@ -62432,7 +62477,7 @@ The epithelium exists before becoming folded into the rosette. tunica serosa - http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html + http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html @@ -80354,6 +80399,7 @@ This may be the same as CoBL. 2013-09-30T03:31:51Z zebrafish_anatomy ZFA:0005768 + trigeminal sensory neuron @@ -80420,6 +80466,7 @@ This may be the same as CoBL. 2013-11-05T11:05:25Z zebrafish_anatomy ZFA:0005770 + crypt neuron olfactory support cell @@ -80522,6 +80569,7 @@ This may be the same as CoBL. CL:0002546 zebrafish_anatomy ZFA:0005773 + embryonic blood vessel endothelial progenitor cell @@ -80583,6 +80631,7 @@ This may be the same as CoBL. CL:0007011 zebrafish_anatomy ZFA:0005775 + enteric neuron @@ -80610,6 +80659,7 @@ This may be the same as CoBL. CL:0011102 zebrafish_anatomy ZFA:0005776 + parasympathetic neuron @@ -80637,6 +80687,7 @@ This may be the same as CoBL. CL:0011103 zebrafish_anatomy ZFA:0005777 + sympathetic neuron @@ -80659,6 +80710,7 @@ This may be the same as CoBL. zebrafish_anatomy orexin secreting neuron ZFA:0005778 + hypocretin-secreting neuron @@ -80854,6 +80906,7 @@ This may be the same as CoBL. CL:0000737 zebrafish_anatomy ZFA:0005784 + striated muscle cell @@ -80956,6 +81009,7 @@ This may be the same as CoBL. 2014-03-25T09:31:29Z zebrafish_anatomy ZFA:0005786 + cleft cell @@ -83572,6 +83626,7 @@ this previously described vessel is connected to, or derived from, the FL networ 2016-01-12T10:33:08Z zebrafish_anatomy ZFA:0005865 + reticulospinal neuron @@ -83595,6 +83650,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy V ZFA:0005866 + vestibulospinal neuron @@ -83885,6 +83941,7 @@ this previously described vessel is connected to, or derived from, the FL networ 2016-03-23T01:14:15Z zebrafish_anatomy ZFA:0005874 + spiral neuron @@ -84023,6 +84080,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0000024 zebrafish_anatomy ZFA:0005878 + oogonia @@ -86180,7 +86238,7 @@ this previously described vessel is connected to, or derived from, the FL networ - Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes . + Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes . ceriv 2021-01-27T10:44:40Z zebrafish_anatomy @@ -86191,7 +86249,7 @@ this previously described vessel is connected to, or derived from, the FL networ - Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes . + Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes . GOC:cvs ORCID:0000-0002-1009-339X ORCID:0000-0002-2244-7917 @@ -86200,6 +86258,26 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance. + ceriv + 2021-03-25T15:52:05Z + zebrafish_anatomy + ZFA:0005943 + perivitelline fluid + + + + + Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance. + ZFIN:ZDB-PUB-200910-2 + + + + @@ -86236,6 +86314,401 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + + + + + + Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus. + 2021-07-09T09:06:25Z + red-sensitive cone cell + zebrafish_anatomy + unequal double cone cell + ZFA:0005945 + + long double cone cell + + + + + Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + red-sensitive cone cell + ZFIN:ZDB-PUB-990520-1 + + + + + unequal double cone cell + ZFIN:ZDB-PUB-961014-677 + + + + + + + + + + + + + + + Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus. + ceriv + 2021-07-09T10:53:10Z + green-sensitive cone + zebrafish_anatomy + unequal double cone cell + ZFA:0005946 + + short double cone cell + + + + + Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + green-sensitive cone + ZFIN:ZDB-PUB-990520-1 + + + + + unequal double cone cell + ZFIN:ZDB-PUB-961014-677 + + + + + + + + + Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells. + ceriv + 2021-07-09T11:01:04Z + blue-sensitive cone cell + zebrafish_anatomy + ZFA:0005947 + + long single cone cell + + + + + Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + blue-sensitive cone cell + ZFIN:ZDB-PUB-990520-1 + + + + + + + + + Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs. + ceriv + 2021-07-09T11:10:25Z + UV-sensitive cone + ultraviolet-sensitive cone + zebrafish_anatomy + ZFA:0005948 + + short single cone cell + + + + + Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + UV-sensitive cone + ZFIN:ZDB-PUB-990520-1 + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the heart. + 2021-08-13T11:47:35Z + zebrafish_anatomy + ZFA:0005949 + heart lymph vessel + + + + + Lymph vessel located in the heart. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition. + ceriv + 2021-08-13T11:53:55Z + outflow tract lymph vessel + zebrafish_anatomy + ZFA:0005950 + bulbus arteriosus lymph vessel + + + + + Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels. + ceriv + 2021-08-13T11:58:24Z + zebrafish_anatomy + ZFA:0005951 + cardiac ventricle lymph vessel + + + + + Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + Lymphatic system of the heart. + ceriv + 2021-08-13T12:23:44Z + zebrafish_anatomy + ZFA:0005952 + heart lymphatic system + + + + + Lymphatic system of the heart. + GOC:CVS + ORCID:0000-0002-2244-7917 + + + + + + + + + Capillary plexus that is located in the heart. + ceriv + 2021-08-13T12:26:17Z + zebrafish_anatomy + ZFA:0005953 + coronary capillary plexus + + + + + Capillary plexus that is located in the heart. + GOC:cvs + ORCID:0000-0002-2244-7917 + + + + + + + + + + + + + + + + + + + + + Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network. + ceriv + 2021-08-13T12:30:04Z + isolated lymph endothelial cells + zebrafish_anatomy + ZFA:0005954 + cardiac lymphatic endothelial cluster + + + + + Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage. + ceriv + 2021-08-13T12:53:02Z + zebrafish_anatomy + ZFA:0005955 + lymphatic endothelial cluster + + + + + Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + A stem cell that can give rise to cell types of the germ-line. + ceriv + 2021-08-13T13:44:39Z + CL:0000014 + zebrafish_anatomy + ZFA:0005956 + + germline stem cell + + + + + A stem cell that can give rise to cell types of the germ-line. + ORCID:0000-0002-4142-7153 + + + + + + + + + + + + + + + A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. + ceriv + 2021-08-13T13:47:16Z + CL:0000034 + zebrafish_anatomy + ZFA:0005957 + + stem cell + + + + + A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. + GOC:tfm + + + + @@ -89563,6 +90036,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory neural crest cells zebrafish_anatomy ZFA:0007084 + premigratory neural crest cell @@ -89655,6 +90129,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory neural crest cells zebrafish_anatomy ZFA:0007086 + migratory neural crest cell @@ -89751,6 +90226,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0002321 zebrafish_anatomy ZFA:0007089 + embryonic cell @@ -89785,6 +90261,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory cranial neural crest cells zebrafish_anatomy ZFA:0007090 + premigratory cranial neural crest cell @@ -89832,6 +90309,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory cranial neural crest cells zebrafish_anatomy ZFA:0007091 + migratory cranial neural crest cell @@ -89941,6 +90419,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory trunk neural crest cells zebrafish_anatomy ZFA:0007094 + premigratory trunk neural crest cell @@ -89988,6 +90467,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory trunk neural crest cells zebrafish_anatomy ZFA:0007095 + migratory trunk neural crest cell @@ -90571,6 +91051,7 @@ this previously described vessel is connected to, or derived from, the FL networ CSF-cNs zebrafish_anatomy ZFA:0007120 + cerebrospinal fluid contacting neuron @@ -90609,6 +91090,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy KA 2 ZFA:0007121 + ventral cerebrospinal fluid contacting neuron @@ -90646,6 +91128,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy <new synonym> ZFA:0007122 + epidermal stem cell @@ -90680,6 +91163,7 @@ this previously described vessel is connected to, or derived from, the FL networ ionocyte progenitor cells zebrafish_anatomy ZFA:0007123 + ionocyte progenitor cell @@ -90721,6 +91205,7 @@ this previously described vessel is connected to, or derived from, the FL networ keratinocyte progenitor cells zebrafish_anatomy ZFA:0007124 + keratinocyte progenitor cell @@ -99968,13 +100453,7 @@ this previously described vessel is connected to, or derived from, the FL networ - - - - - - - + A stem cell that can give rise to cell types of the body other than those of the germ-line. CL:0000723 TAO:0009307 @@ -99989,7 +100468,7 @@ this previously described vessel is connected to, or derived from, the FL networ A stem cell that can give rise to cell types of the body other than those of the germ-line. - GO:CJM + GO:cjm @@ -102575,6 +103054,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0011004 zebrafish_anatomy ZFA:0009401 + lens fiber cell @@ -102657,11 +103137,12 @@ this previously described vessel is connected to, or derived from, the FL networ Endothelial cells that surround the heart valve extracellular matrix. ceriv 2020-12-08T09:48:24Z + heart valve endocardial cell zebrafish_anatomy VEC ZFA:0009404 - heart valve endothelial cells + heart valve endothelial cell @@ -102671,6 +103152,12 @@ this previously described vessel is connected to, or derived from, the FL networ ORCID:0000-0002-2244-7917 ZFIN:ZDB-PUB-191202-2 + + + + heart valve endocardial cell + ZFIN:ZDB-PUB-200221-32 + @@ -102698,7 +103185,7 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2430 zebrafish_stages ZFS:0000000 - Unknown + unknown @@ -102711,7 +103198,7 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2431 zebrafish_stages ZFS:0000001 - Zygote:1-cell + zygote:1-cell @@ -102720,11 +103207,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-15 ZFIN:ZDB-TERM-100331-2432 zebrafish_stages ZFS:0000002 - Cleavage:2-cell + cleavage:2-cell @@ -102733,11 +103226,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-11 ZFIN:ZDB-TERM-100331-2433 zebrafish_stages ZFS:0000003 - Cleavage:4-cell + cleavage:4-cell @@ -102746,11 +103245,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-33 ZFIN:ZDB-TERM-100331-2434 zebrafish_stages ZFS:0000004 - Cleavage:8-cell + cleavage:8-cell @@ -102759,11 +103264,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-20 ZFIN:ZDB-TERM-100331-2435 zebrafish_stages ZFS:0000005 - Cleavage:16-cell + cleavage:16-cell @@ -102772,11 +103283,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-25 ZFIN:ZDB-TERM-100331-2436 zebrafish_stages ZFS:0000006 - Cleavage:32-cell + cleavage:32-cell @@ -102785,11 +103302,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-28 ZFIN:ZDB-TERM-100331-2437 zebrafish_stages ZFS:0000007 - Cleavage:64-cell + cleavage:64-cell @@ -102798,11 +103321,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-7 ZFIN:ZDB-TERM-100331-2438 zebrafish_stages ZFS:0000008 - Blastula:128-cell + blastula:128-cell @@ -102811,11 +103340,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-1 ZFIN:ZDB-TERM-100331-2439 zebrafish_stages ZFS:0000009 - Blastula:256-cell + blastula:256-cell @@ -102824,11 +103359,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-14 ZFIN:ZDB-TERM-100331-2440 zebrafish_stages ZFS:0000010 - Blastula:512-cell + blastula:512-cell @@ -102837,11 +103378,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-22 ZFIN:ZDB-TERM-100331-2441 zebrafish_stages ZFS:0000011 - Blastula:1k-cell + blastula:1k-cell @@ -102850,11 +103397,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-27 ZFIN:ZDB-TERM-100331-2442 zebrafish_stages ZFS:0000012 - Blastula:High + blastula:high @@ -102863,11 +103416,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-24 ZFIN:ZDB-TERM-100331-2443 zebrafish_stages ZFS:0000013 - Blastula:Oblong + blastula:oblong @@ -102876,11 +103435,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-21 ZFIN:ZDB-TERM-100331-2444 zebrafish_stages ZFS:0000014 - Blastula:Sphere + blastula:sphere @@ -102889,11 +103454,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-19 ZFIN:ZDB-TERM-100331-2445 zebrafish_stages ZFS:0000015 - Blastula:Dome + blastula:dome @@ -102902,11 +103473,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-17 ZFIN:ZDB-TERM-100331-2446 zebrafish_stages ZFS:0000016 - Blastula:30%-epiboly + blastula:30%-epiboly @@ -102915,11 +103492,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-6 ZFIN:ZDB-TERM-100331-2447 zebrafish_stages ZFS:0000017 - Gastrula:50%-epiboly + gastrula:50%-epiboly @@ -102928,11 +103511,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-3 ZFIN:ZDB-TERM-100331-2448 zebrafish_stages ZFS:0000018 - Gastrula:Germ-ring + gastrula:germ-ring @@ -102941,11 +103530,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-2 ZFIN:ZDB-TERM-100331-2449 zebrafish_stages ZFS:0000019 - Gastrula:Shield + gastrula:shield @@ -102954,11 +103549,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-18 ZFIN:ZDB-TERM-100331-2450 zebrafish_stages ZFS:0000020 - Gastrula:75%-epiboly + gastrula:75%-epiboly @@ -102967,11 +103568,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-29 ZFIN:ZDB-TERM-100331-2451 zebrafish_stages ZFS:0000021 - Gastrula:90%-epiboly + gastrula:90%-epiboly @@ -102980,11 +103587,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-12 ZFIN:ZDB-TERM-100331-2452 zebrafish_stages ZFS:0000022 - Gastrula:Bud + gastrula:bud @@ -102993,11 +103606,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-23 ZFIN:ZDB-TERM-100331-2453 zebrafish_stages ZFS:0000023 - Segmentation:1-4 somites + segmentation:1-4 somites @@ -103006,11 +103625,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-5 ZFIN:ZDB-TERM-100331-2454 zebrafish_stages ZFS:0000024 - Segmentation:5-9 somites + segmentation:5-9 somites @@ -103019,11 +103644,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-020626-1 ZFIN:ZDB-TERM-100331-2455 zebrafish_stages ZFS:0000025 - Segmentation:10-13 somites + segmentation:10-13 somites @@ -103032,11 +103663,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-30 ZFIN:ZDB-TERM-100331-2456 zebrafish_stages ZFS:0000026 - Segmentation:14-19 somites + segmentation:14-19 somites @@ -103045,11 +103682,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-16 ZFIN:ZDB-TERM-100331-2457 zebrafish_stages ZFS:0000027 - Segmentation:20-25 somites + segmentation:20-25 somites @@ -103058,11 +103701,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-34 ZFIN:ZDB-TERM-100331-2458 zebrafish_stages ZFS:0000028 - Segmentation:26+ somites + segmentation:26+ somites @@ -103071,11 +103720,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-10 ZFIN:ZDB-TERM-100331-2439 zebrafish_stages ZFS:0000029 - Pharyngula:Prim-5 + pharyngula:prim-5 @@ -103084,11 +103739,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-32 ZFIN:ZDB-TERM-100331-2460 zebrafish_stages ZFS:0000030 - Pharyngula:Prim-15 + pharyngula:prim-15 @@ -103097,11 +103758,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-13 ZFIN:ZDB-TERM-100331-2461 zebrafish_stages ZFS:0000031 - Pharyngula:Prim-25 + pharyngula:prim-25 @@ -103110,11 +103777,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-31 ZFIN:ZDB-TERM-100331-2462 zebrafish_stages ZFS:0000032 - Pharyngula:High-pec + pharyngula:high-pec @@ -103123,11 +103796,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-9 ZFIN:ZDB-TERM-100331-2463 zebrafish_stages ZFS:0000033 - Hatching:Long-pec + hatching:long-pec @@ -103136,11 +103815,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-26 ZFIN:ZDB-TERM-100331-2464 zebrafish_stages ZFS:0000034 - Hatching:Pec-fin + hatching:pec-fin @@ -103149,11 +103834,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-8 ZFIN:ZDB-TERM-100331-2465 zebrafish_stages ZFS:0000035 - Larval:Protruding-mouth + larval:protruding-mouth @@ -103162,11 +103853,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-35 ZFIN:ZDB-TERM-100331-2466 zebrafish_stages ZFS:0000036 - Larval:Day 4 + larval:day 4 @@ -103175,11 +103872,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-36 ZFIN:ZDB-TERM-100331-2467 zebrafish_stages ZFS:0000037 - Larval:Day 5 + larval:day 5 @@ -103188,11 +103891,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-37 ZFIN:ZDB-TERM-100331-2468 zebrafish_stages ZFS:0000038 - Larval:Day 6 + larval:day 6 @@ -103201,11 +103910,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-47 ZFIN:ZDB-TERM-100331-2469 zebrafish_stages ZFS:0000039 - Larval:Days 7-13 + larval:days 7-13 @@ -103214,11 +103929,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-48 ZFIN:ZDB-TERM-100331-2470 zebrafish_stages ZFS:0000040 - Larval:Days 14-20 + larval:days 14-20 @@ -103227,11 +103948,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-49 ZFIN:ZDB-TERM-100331-2471 zebrafish_stages ZFS:0000041 - Larval:Days 21-29 + larval:days 21-29 @@ -103240,11 +103967,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-51 ZFIN:ZDB-TERM-100331-2472 zebrafish_stages ZFS:0000042 - Juvenile:Days 30-44 + juvenile:days 30-44 @@ -103253,11 +103986,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-52 ZFIN:ZDB-TERM-100331-2473 zebrafish_stages ZFS:0000043 - Juvenile:Days 45-89 + juvenile:days 45-89 @@ -103270,7 +104009,139 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2474 zebrafish_stages ZFS:0000044 - Adult + adult + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000045 + blastula + + + + + + + + + zebrafish_stages + ZFS:0000046 + cleavage + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000047 + gastrula + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000048 + larva + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000049 + segmentation + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000050 + pharyngula + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000051 + juvenile + + + + + + + + + + + + + + + yvonne + 2014-11-05T08:33:09Z + zebrafish_stages + ZFS:0007000 + hatching @@ -103280,7 +104151,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_stages ZFS:0100000 - Stages + zebrafish stage diff --git a/zfa-simple.json b/zfa-simple.json index 389d27e..67b29c9 100644 --- a/zfa-simple.json +++ b/zfa-simple.json @@ -8,6 +8,11 @@ "pred": "inverseOf", "sub": "http://purl.obolibrary.org/obo/BFO_0000050" }, + { + "obj": "http://purl.obolibrary.org/obo/BFO_0000062", + "pred": "subPropertyOf", + "sub": "http://purl.obolibrary.org/obo/RO_0002087" + }, { "obj": "http://purl.obolibrary.org/obo/RO_0002131", "pred": "subPropertyOf", @@ -393,6 +398,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005075" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000009", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000010", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -623,6 +633,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0000329" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000020", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005943" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000022", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -3543,6 +3558,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005068" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000173", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000175", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -5153,6 +5173,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005658" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000385", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005955" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000386", "pred": "is_a", @@ -24223,6 +24248,16 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005814" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005811", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005952" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005811", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005953" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0005818", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -24553,6 +24588,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005862" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005844", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0005844", "pred": "is_a", @@ -25073,6 +25113,41 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0009181" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005949", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005949", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005952", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005952", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005955", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005957", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005956" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005957", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0006000", "pred": "http://purl.obolibrary.org/obo/RO_0002202", @@ -26048,6 +26123,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005944" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", "pred": "is_a", @@ -26383,11 +26463,6 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0009306" }, - { - "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", - "pred": "is_a", - "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" - }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", "pred": "is_a", @@ -28793,6 +28868,26 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005929" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005947" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005948" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009265", "pred": "http://purl.obolibrary.org/obo/RO_0002202", @@ -30038,6 +30133,11 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005930" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -30458,11 +30558,6 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0009306" }, - { - "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", - "pred": "http://purl.obolibrary.org/obo/RO_0002496", - "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" - }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -36658,6 +36753,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005926" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -39243,6 +39348,11 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005800" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -39498,6 +39608,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005769" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -39688,6 +39808,251 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0005594" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000008" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000009" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000010" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000011" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000012" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000013" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000014" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000015" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000016" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/RO_0002087", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000047" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000002" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000003" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000004" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000005" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000006" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000007" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000046", + "pred": "http://purl.obolibrary.org/obo/RO_0002087", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000045" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000017" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000018" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000019" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000020" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000021" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000022" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": "http://purl.obolibrary.org/obo/RO_0002087", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000049" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000048", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000035" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000048", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000036" + }, + { + "obj": 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"http://purl.obolibrary.org/obo/ZFS_0000048" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", "pred": "is_a", @@ -39912,6 +40277,46 @@ "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFS_0000044" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000045" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000046" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000047" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000048" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000049" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000050" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000051" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0007000" } ], "equivalentNodesSets": [], @@ -39919,6 +40324,14 @@ "logicalDefinitionAxioms": [], "meta": { "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/IAO_0000700", + "val": "http://purl.obolibrary.org/obo/ZFA_0100000" + }, + { + "pred": "http://purl.obolibrary.org/obo/IAO_0000700", + "val": "http://purl.obolibrary.org/obo/ZFS_0100000" + }, { "pred": "http://purl.org/dc/elements/1.1/description", "val": "ZFA description." @@ -39933,11 +40346,11 @@ }, { "pred": "http://www.geneontology.org/formats/oboInOwl#auto-generated-by", - "val": "OBO-Edit 2.3.1" + "val": "OBO-Edit 2.3-beta5" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#date", - "val": "08:03:2021 11:16" + "val": "29:11:2022 16:29" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#default-namespace", @@ -39949,7 +40362,7 @@ }, { "pred": "http://www.geneontology.org/formats/oboInOwl#saved-by", - "val": "ceriv" + "val": "zfinf" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-genus-differentia", @@ -39967,17 +40380,13 @@ "pred": "http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-genus-differentia", "val": "VSAO part_of NCBITaxon:7955" }, - { - "pred": "http://www.w3.org/2000/01/rdf-schema#comment", - "val": "SVN version: $Revision: 1.100$" - }, { "pred": "http://www.w3.org/2002/07/owl#versionInfo", - "val": "2022-03-15" + "val": "2022-12-09" } ], "subsets": [], - "version": "http://purl.obolibrary.org/obo/zfa/releases/2022-03-15/zfa-simple.json", + "version": "http://purl.obolibrary.org/obo/zfa/releases/2022-12-09/zfa-simple.json", "xrefs": [] }, "nodes": [ @@ -40025,6 +40434,62 @@ }, "type": "PROPERTY" }, + { + "id": "http://purl.obolibrary.org/obo/BFO_0000062", + "lbl": "preceded_by", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomical_ontology" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val": "preceded_by" + } + ], + "definition": { + "val": "X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X).", + "xrefs": [ + "goc:cjm" + ] + }, + "xrefs": [ + { + "val": "BFO:0000062" + } + ] + }, + "type": "PROPERTY" + }, + { + "id": "http://purl.obolibrary.org/obo/RO_0002087", + "lbl": "immediately_preceded_by", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomical_ontology" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val": "immediately_preceded_by" + } + ], + "definition": { + "val": "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y).", + "xrefs": [ + "goc:cjm" + ] + }, + "xrefs": [ + { + "val": "RO:0002087" + } + ] + }, + "type": "PROPERTY" + }, { "id": "http://purl.obolibrary.org/obo/RO_0002131", "lbl": "overlaps", @@ -46095,7 +46560,7 @@ }, { "pred": "hasExactSynonym", - "val": "corpus cerebelli granular layer ", + "val": "corpus cerebelli granular layer", "xrefs": [ "ZFIN:ZDB-PUB-961014-1280" ] @@ -48432,7 +48897,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -49312,7 +49777,7 @@ "synonyms": [ { "pred": "hasExactSynonym", - "val": "flexor caudalis dorsalis superioris ", + "val": "flexor caudalis dorsalis superioris", "xrefs": [] }, { @@ -51190,7 +51655,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -52819,7 +53284,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -53579,7 +54044,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -54174,7 +54639,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:JCN 421-:189-198" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -54458,7 +54923,7 @@ }, { "pred": "hasExactSynonym", - "val": "upper semilunar valve ", + "val": "upper semilunar valve", "xrefs": [ "ZFIN:ZDB-PUB-060921-12" ] @@ -54888,7 +55353,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -55956,7 +56421,7 @@ }, { "pred": "hasExactSynonym", - "val": " dilatator opercula", + "val": "dilatator opercula", "xrefs": [] }, { @@ -56437,7 +56902,7 @@ }, { "pred": "hasRelatedSynonym", - "val": "tuberculum impar of Herrick ", + "val": "tuberculum impar of Herrick", "xrefs": [] } ], @@ -56822,7 +57287,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -57657,7 +58122,7 @@ }, { "pred": "hasRelatedSynonym", - "val": "post-temporal ", + "val": "post-temporal", "xrefs": [] } ], @@ -58930,7 +59395,7 @@ }, { "pred": "hasExactSynonym", - "val": "octaval ganglion ", + "val": "octaval ganglion", "xrefs": [] }, { @@ -59251,7 +59716,7 @@ "synonyms": [ { "pred": "hasExactSynonym", - "val": "semicircular torus ", + "val": "semicircular torus", "xrefs": [] } ], @@ -59538,7 +60003,7 @@ }, { "pred": "hasExactSynonym", - "val": "transversus ventralis ", + "val": "transversus ventralis", "xrefs": [] } ], @@ -65864,7 +66329,7 @@ } ], "definition": { - "val": "Portion of somite 16 that gives rise to body wall muscle masses.", + "val": "Portion of somite 26 that gives rise to body wall muscle masses.", "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", @@ -70134,10 +70599,11 @@ } ], "definition": { - "val": "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", + "val": "One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", "xrefs": [ "GOC:ymb", - "ORCiD:0000-0002-9900-7880" + "ORCiD:0000-0002-9900-7880", + "ZFIN:ZDB-PUB-110811-14" ] }, "synonyms": [ @@ -70145,6 +70611,16 @@ "pred": "hasExactSynonym", "val": "pll", "xrefs": [] + }, + { + "pred": "hasRelatedSynonym", + "val": "midbody lateral line", + "xrefs": [] + }, + { + "pred": "hasRelatedSynonym", + "val": "midtrunk line", + "xrefs": [] } ], "xrefs": [ @@ -81428,7 +81904,7 @@ "pred": "hasRelatedSynonym", "val": "tunica muscularis", "xrefs": [ - "http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" + "http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" ] } ], @@ -97747,10 +98223,11 @@ } ], "definition": { - "val": "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", + "val": "One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", "xrefs": [ "GOC:ymb", - "ORCiD:0000-0002-9900-7880" + "ORCiD:0000-0002-9900-7880", + "ZFIN:ZDB-PUB-070907-34" ] }, "synonyms": [ @@ -98363,7 +98840,7 @@ "pred": "hasRelatedSynonym", "val": "tunica serosa", "xrefs": [ - "http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" + "http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" ] } ], @@ -121010,7 +121487,10 @@ "xrefs": [ "ZFIN:ZDB-PUB-120106-15" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -121074,7 +121554,10 @@ "ORCiD:0000-0002-2244-7917", "ZFIN:ZDB-PUB-060724-7" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -121169,6 +121652,9 @@ "GOC:tjm" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0002546" @@ -121230,6 +121716,9 @@ "CL:MAH" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0007011" @@ -121262,6 +121751,9 @@ "ISBN:0080923437" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011102" @@ -121294,6 +121786,9 @@ "ISBN:0080923437" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011103" @@ -121326,6 +121821,9 @@ "PMID:23848055" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -121509,6 +122007,9 @@ "ISBN:0721662544" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0000737" @@ -121578,7 +122079,10 @@ "ORCiD:0000-0002-2244-7917", "ZFIN:ZDB-PUB-961014-195" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -124292,7 +124796,10 @@ "ORCID:0000-0002-2244-7917", "ZFIN:ZDB-PUB-961014-594" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -124320,6 +124827,9 @@ "ZFIN:ZDB-PUB-961014-572" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -124583,7 +125093,10 @@ "ZFIN:ZDB-PUB-110110-13", "ZFIN:ZDB-PUB-150512-4" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -124727,6 +125240,9 @@ "ZFIN:ZDB-PUB-120718-30" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0000024" @@ -126947,7 +127463,7 @@ } ], "definition": { - "val": "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes .", + "val": "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes .", "xrefs": [ "GOC:cvs", "ORCID:0000-0002-1009-339X", @@ -126961,6 +127477,33 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005943", + "lbl": "perivitelline fluid", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-03-25T15:52:05Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance.", + "xrefs": [ + "ZFIN:ZDB-PUB-200910-2" + ] + } + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFA_0005944", "lbl": "mural cell", @@ -126998,6 +127541,470 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005945", + "lbl": "long double cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T09:06:25Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "red-sensitive cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasRelatedSynonym", + "val": "unequal double cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-961014-677" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005946", + "lbl": "short double cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T10:53:10Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "green-sensitive cone", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasRelatedSynonym", + "val": "unequal double cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-961014-677" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005947", + "lbl": "long single cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T11:01:04Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "blue-sensitive cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005948", + "lbl": "short single cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T11:10:25Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "UV-sensitive cone", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasExactSynonym", + "val": "ultraviolet-sensitive cone", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005949", + "lbl": "heart lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:47:35Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the heart.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005950", + "lbl": "bulbus arteriosus lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:53:55Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + }, + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "outflow tract lymph vessel", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005951", + "lbl": "cardiac ventricle lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:58:24Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005952", + "lbl": "heart lymphatic system", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:23:44Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymphatic system of the heart.", + "xrefs": [ + "GOC:CVS", + "ORCID:0000-0002-2244-7917" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005953", + "lbl": "coronary capillary plexus", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:26:17Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Capillary plexus that is located in the heart.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005954", + "lbl": "cardiac lymphatic endothelial cluster", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:30:04Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + }, + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "isolated lymph endothelial cells", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005955", + "lbl": "lymphatic endothelial cluster", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:53:02Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005956", + "lbl": "germline stem cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T13:44:39Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "A stem cell that can give rise to cell types of the germ-line.", + "xrefs": [ + "ORCID:0000-0002-4142-7153" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "xrefs": [ + { + "val": "CL:0000014" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005957", + "lbl": "stem cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T13:47:16Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.", + "xrefs": [ + "GOC:tfm" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "xrefs": [ + { + "val": "CL:0000034" + } + ] + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFA_0006000", "lbl": "intermediate hypothalamus", @@ -129751,6 +130758,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -129820,6 +130830,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -129916,6 +130929,9 @@ "CL:curator" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0002321" @@ -129949,6 +130965,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -129985,6 +131004,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -130082,6 +131104,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -130118,6 +131143,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -130856,6 +131884,9 @@ "ZFIN:ZDB-PUB-170409-2" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -130902,6 +131933,9 @@ "ZFIN:ZDB-PUB-170409-2" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -130952,6 +131986,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -130993,6 +132030,9 @@ "ZFIN:ZDB-PUB-190402-19" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -131030,6 +132070,9 @@ "ZFIN:ZDB-PUB-190402-19" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -142311,7 +143354,7 @@ "definition": { "val": "A stem cell that can give rise to cell types of the body other than those of the germ-line.", "xrefs": [ - "GO:CJM" + "GO:cjm" ] }, "subsets": [ @@ -145843,6 +146886,9 @@ "GOC:nv" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011004" @@ -145929,7 +146975,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFA_0009404", - "lbl": "heart valve endothelial cells", + "lbl": "heart valve endothelial cell", "meta": { "basicPropertyValues": [ { @@ -145957,6 +147003,13 @@ "http://purl.obolibrary.org/obo/zfa#cell_slim" ], "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "heart valve endocardial cell", + "xrefs": [ + "ZFIN:ZDB-PUB-200221-32" + ] + }, { "pred": "hasRelatedSynonym", "val": "VEC", @@ -145983,7 +147036,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000000", - "lbl": "Unknown", + "lbl": "unknown", "meta": { "basicPropertyValues": [ { @@ -146004,7 +147057,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000001", - "lbl": "Zygote:1-cell", + "lbl": "zygote:1-cell", "meta": { "basicPropertyValues": [ { @@ -146025,7 +147078,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000002", - "lbl": "Cleavage:2-cell", + "lbl": "cleavage:2-cell", "meta": { "basicPropertyValues": [ { @@ -146046,7 +147099,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000003", - "lbl": "Cleavage:4-cell", + "lbl": "cleavage:4-cell", "meta": { "basicPropertyValues": [ { @@ -146067,7 +147120,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000004", - "lbl": "Cleavage:8-cell", + "lbl": "cleavage:8-cell", "meta": { "basicPropertyValues": [ { @@ -146088,7 +147141,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000005", - "lbl": "Cleavage:16-cell", + "lbl": "cleavage:16-cell", "meta": { "basicPropertyValues": [ { @@ -146109,7 +147162,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000006", - "lbl": "Cleavage:32-cell", + "lbl": "cleavage:32-cell", "meta": { "basicPropertyValues": [ { @@ -146130,7 +147183,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000007", - "lbl": "Cleavage:64-cell", + "lbl": "cleavage:64-cell", "meta": { "basicPropertyValues": [ { @@ -146151,7 +147204,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000008", - "lbl": "Blastula:128-cell", + "lbl": "blastula:128-cell", "meta": { "basicPropertyValues": [ { @@ -146172,7 +147225,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000009", - "lbl": "Blastula:256-cell", + "lbl": "blastula:256-cell", "meta": { "basicPropertyValues": [ { @@ -146193,7 +147246,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000010", - "lbl": "Blastula:512-cell", + "lbl": "blastula:512-cell", "meta": { "basicPropertyValues": [ { @@ -146214,7 +147267,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000011", - "lbl": "Blastula:1k-cell", + "lbl": "blastula:1k-cell", "meta": { "basicPropertyValues": [ { @@ -146235,7 +147288,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000012", - "lbl": "Blastula:High", + "lbl": "blastula:high", "meta": { "basicPropertyValues": [ { @@ -146256,7 +147309,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000013", - "lbl": "Blastula:Oblong", + "lbl": "blastula:oblong", "meta": { "basicPropertyValues": [ { @@ -146277,7 +147330,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000014", - "lbl": "Blastula:Sphere", + "lbl": "blastula:sphere", "meta": { "basicPropertyValues": [ { @@ -146298,7 +147351,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000015", - "lbl": "Blastula:Dome", + "lbl": "blastula:dome", "meta": { "basicPropertyValues": [ { @@ -146319,7 +147372,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000016", - "lbl": "Blastula:30%-epiboly", + "lbl": "blastula:30%-epiboly", "meta": { "basicPropertyValues": [ { @@ -146340,7 +147393,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000017", - "lbl": "Gastrula:50%-epiboly", + "lbl": "gastrula:50%-epiboly", "meta": { "basicPropertyValues": [ { @@ -146361,7 +147414,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000018", - "lbl": "Gastrula:Germ-ring", + "lbl": "gastrula:germ-ring", "meta": { "basicPropertyValues": [ { @@ -146382,7 +147435,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000019", - "lbl": "Gastrula:Shield", + "lbl": "gastrula:shield", "meta": { "basicPropertyValues": [ { @@ -146403,7 +147456,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000020", - "lbl": "Gastrula:75%-epiboly", + "lbl": "gastrula:75%-epiboly", "meta": { "basicPropertyValues": [ { @@ -146424,7 +147477,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000021", - "lbl": "Gastrula:90%-epiboly", + "lbl": "gastrula:90%-epiboly", "meta": { "basicPropertyValues": [ { @@ -146445,7 +147498,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000022", - "lbl": "Gastrula:Bud", + "lbl": "gastrula:bud", "meta": { "basicPropertyValues": [ { @@ -146466,7 +147519,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000023", - "lbl": "Segmentation:1-4 somites", + "lbl": "segmentation:1-4 somites", "meta": { "basicPropertyValues": [ { @@ -146487,7 +147540,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000024", - "lbl": "Segmentation:5-9 somites", + "lbl": "segmentation:5-9 somites", "meta": { "basicPropertyValues": [ { @@ -146508,7 +147561,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000025", - "lbl": "Segmentation:10-13 somites", + "lbl": "segmentation:10-13 somites", "meta": { "basicPropertyValues": [ { @@ -146529,7 +147582,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000026", - "lbl": "Segmentation:14-19 somites", + "lbl": "segmentation:14-19 somites", "meta": { "basicPropertyValues": [ { @@ -146550,7 +147603,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000027", - "lbl": "Segmentation:20-25 somites", + "lbl": "segmentation:20-25 somites", "meta": { "basicPropertyValues": [ { @@ -146571,7 +147624,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000028", - "lbl": "Segmentation:26+ somites", + "lbl": "segmentation:26+ somites", "meta": { "basicPropertyValues": [ { @@ -146592,7 +147645,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000029", - "lbl": "Pharyngula:Prim-5", + "lbl": "pharyngula:prim-5", "meta": { "basicPropertyValues": [ { @@ -146613,7 +147666,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000030", - "lbl": "Pharyngula:Prim-15", + "lbl": "pharyngula:prim-15", "meta": { "basicPropertyValues": [ { @@ -146634,7 +147687,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000031", - "lbl": "Pharyngula:Prim-25", + "lbl": "pharyngula:prim-25", "meta": { "basicPropertyValues": [ { @@ -146655,7 +147708,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000032", - "lbl": "Pharyngula:High-pec", + "lbl": "pharyngula:high-pec", "meta": { "basicPropertyValues": [ { @@ -146676,7 +147729,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000033", - "lbl": "Hatching:Long-pec", + "lbl": "hatching:long-pec", "meta": { "basicPropertyValues": [ { @@ -146697,7 +147750,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000034", - "lbl": "Hatching:Pec-fin", + "lbl": "hatching:pec-fin", "meta": { "basicPropertyValues": [ { @@ -146718,7 +147771,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000035", - "lbl": "Larval:Protruding-mouth", + "lbl": "larval:protruding-mouth", "meta": { "basicPropertyValues": [ { @@ -146739,7 +147792,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000036", - "lbl": "Larval:Day 4", + "lbl": "larval:day 4", "meta": { "basicPropertyValues": [ { @@ -146760,7 +147813,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000037", - "lbl": "Larval:Day 5", + "lbl": "larval:day 5", "meta": { "basicPropertyValues": [ { @@ -146781,7 +147834,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000038", - "lbl": "Larval:Day 6", + "lbl": "larval:day 6", "meta": { "basicPropertyValues": [ { @@ -146802,7 +147855,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000039", - "lbl": "Larval:Days 7-13", + "lbl": "larval:days 7-13", "meta": { "basicPropertyValues": [ { @@ -146823,7 +147876,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000040", - "lbl": "Larval:Days 14-20", + "lbl": "larval:days 14-20", "meta": { "basicPropertyValues": [ { @@ -146844,7 +147897,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000041", - "lbl": "Larval:Days 21-29", + "lbl": "larval:days 21-29", "meta": { "basicPropertyValues": [ { @@ -146865,7 +147918,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000042", - "lbl": "Juvenile:Days 30-44", + "lbl": "juvenile:days 30-44", "meta": { "basicPropertyValues": [ { @@ -146886,7 +147939,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000043", - "lbl": "Juvenile:Days 45-89", + "lbl": "juvenile:days 45-89", "meta": { "basicPropertyValues": [ { @@ -146907,7 +147960,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000044", - "lbl": "Adult", + "lbl": "adult", "meta": { "basicPropertyValues": [ { @@ -146926,9 +147979,121 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000045", + "lbl": "blastula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000046", + "lbl": "cleavage", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000047", + "lbl": "gastrula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000048", + "lbl": "larva", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000049", + "lbl": "segmentation", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000050", + "lbl": "pharyngula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000051", + "lbl": "juvenile", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0007000", + "lbl": "hatching", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "yvonne" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2014-11-05T08:33:09Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFS_0100000", - "lbl": "Stages", + "lbl": "zebrafish stage", "meta": { "basicPropertyValues": [ { diff --git a/zfa-simple.obo b/zfa-simple.obo index e9858d5..33906a9 100644 --- a/zfa-simple.obo +++ b/zfa-simple.obo @@ -1,8 +1,8 @@ format-version: 1.2 -data-version: zfa/releases/2022-03-15/zfa-simple.owl -date: 08:03:2021 11:16 -saved-by: ceriv -auto-generated-by: OBO-Edit 2.3.1 +data-version: zfa/releases/2022-12-09/zfa-simple.owl +date: 29:11:2022 16:29 +saved-by: zfinf +auto-generated-by: OBO-Edit 2.3-beta5 subsetdef: cell_slim "cell_slim" synonymtypedef: PLURAL "PLURAL" default-namespace: zebrafish_anatomical_ontology @@ -10,12 +10,13 @@ treat-xrefs-as-genus-differentia: CARO part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: CL part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: TAO part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: VSAO part_of NCBITaxon:7955 -remark: SVN version: $Revision: 1.100$ ontology: zfa/zfa-simple property_value: http://purl.org/dc/elements/1.1/description "ZFA description." xsd:string property_value: http://purl.org/dc/elements/1.1/title "Zebrafish Anatomy Ontology (ZFA)" xsd:string property_value: http://purl.org/dc/terms/license https://creativecommons.org/licenses/by/3.0/ -property_value: owl:versionInfo "2022-03-15" xsd:string +property_value: IAO:0000700 ZFA:0100000 +property_value: IAO:0000700 ZFS:0100000 +property_value: owl:versionInfo "2022-12-09" xsd:string [Term] id: ZFA:0000000 @@ -24,8 +25,8 @@ namespace: zebrafish_anatomy def: "The visible division between epiblast and hypoblast in the gastrula." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000000 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000001 @@ -36,9 +37,9 @@ synonym: "ciliated organ of asymmetry" EXACT [ZFIN:ZDB-PUB-050221-4] xref: TAO:0000001 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000023 ! forerunner cell group -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000077 ! tail bud -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000003 @@ -50,9 +51,9 @@ synonym: "adaxial cells" EXACT PLURAL [] xref: CL:0007016 xref: TAO:0000003 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000279 ! segmental plate -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000004 @@ -62,9 +63,9 @@ def: "Anterior portion of the axial hypoblast." [GOC:cvs, GOC:ymb, ORCiD:0000-00 synonym: "pre-polster" EXACT [ZFIN:ZDB-PUB-051019-5] xref: TAO:0000004 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001378 ! axial hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000005 @@ -74,7 +75,7 @@ def: "Blood vessels that carry blood away from the heart." [GOC:cvs, ORCiD:0000- synonym: "arterial system" RELATED [] xref: TAO:0000005 is_a: ZFA:0005314 ! blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000006 @@ -84,9 +85,9 @@ def: "The anterior round region of the yolk cell present after the yolk extensio synonym: "yolk ball" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000006 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000084 ! yolk -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000007 @@ -96,7 +97,7 @@ def: "A complex mixture of cells suspended in a liquid matrix that delivers nutr xref: TAO:0000007 is_a: ZFA:0001487 ! portion of organism substance relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000008 @@ -109,7 +110,7 @@ xref: TAO:0000008 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001135 ! neural tube relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000009 @@ -121,7 +122,7 @@ xref: TAO:0000009 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001719 ! presumptive cardiac ventricle heart tube relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000010 @@ -130,7 +131,7 @@ namespace: zebrafish_anatomy def: "Anatomical system that functions in circulation and has as its parts the heart and vasculature. The lymphatic system is considered part of the cardiovascular system." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000010 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000011 @@ -199,7 +200,7 @@ namespace: zebrafish_anatomy xref: TAO:0000017 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0000416 ! presumptive endoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000018 @@ -209,9 +210,9 @@ def: "The outer of the two layers of the blastoderm that form during gastrulatio xref: TAO:0000018 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000019 @@ -226,7 +227,7 @@ is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0001127 ! visual system relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000020 @@ -237,7 +238,7 @@ synonym: "extraembryonic structures" EXACT PLURAL [] xref: CARO:0000042 xref: TAO:0000020 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000022 @@ -251,7 +252,7 @@ xref: TAO:0000022 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001218 ! presumptive floor plate relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000023 @@ -264,8 +265,8 @@ synonym: "forerunner cells" EXACT PLURAL [] xref: TAO:0000023 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001126 ! noninvoluting endocytic marginal cell cluster -relationship: end ZFS:0000023 ! Segmentation:1-4 somites -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000023 ! segmentation:1-4 somites +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0000024 @@ -276,7 +277,7 @@ synonym: "ganglion cell layer" EXACT [] xref: TAO:0000024 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000026 @@ -287,8 +288,8 @@ synonym: "hgg" EXACT [] xref: TAO:0000026 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000058 ! polster -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000027 @@ -310,9 +311,9 @@ synonym: "heart primordia" EXACT PLURAL [] xref: TAO:0000028 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001065 ! lateral mesoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000029 @@ -324,7 +325,7 @@ xref: TAO:0000029 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007043 ! hindbrain neural tube relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000030 @@ -336,7 +337,7 @@ xref: TAO:0000030 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000168 ! anterior macula relationship: part_of ZFA:0000700 ! utricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000031 @@ -346,9 +347,9 @@ def: "Portion of tissue that arises from the arise from the lateral edges of the xref: TAO:0000031 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001217 ! presumptive hypochord -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000017 ! endoderm -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000032 @@ -358,7 +359,7 @@ def: "Multi-tissue structure which is the largest portion of diencephalon and is xref: TAO:0000032 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000033 @@ -371,9 +372,9 @@ xref: TAO:0000033 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000121 ! lateral plate mesoderm relationship: develops_from ZFA:0001201 ! ventral lateral mesoderm -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000034 @@ -384,7 +385,7 @@ synonym: "ll" EXACT [] xref: TAO:0000034 is_a: ZFA:0000282 ! sensory system relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000035 @@ -396,7 +397,7 @@ xref: TAO:0000035 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001679 ! solid lens vesicle relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000036 @@ -405,7 +406,7 @@ namespace: zebrafish_anatomy def: "System responsible for the production and movement of bile." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000036 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000037 @@ -416,8 +417,8 @@ synonym: "anatomical structures" EXACT PLURAL [] xref: CARO:0000003 xref: TAO:0000037 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000038 @@ -426,8 +427,8 @@ namespace: zebrafish_anatomy def: "Embryonic structure, the edge of the blastoderm." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000038 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000039 @@ -435,7 +436,7 @@ name: median axial vein namespace: zebrafish_anatomy xref: TAO:0000039 is_a: ZFA:0000082 ! vein -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000040 @@ -445,8 +446,8 @@ def: "Surface structure that will develop into one of the median fins. Extends synonym: "median fin" RELATED [] xref: TAO:0000040 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000041 @@ -455,7 +456,7 @@ namespace: zebrafish_anatomy xref: TAO:0000041 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000042 @@ -469,7 +470,7 @@ xref: TAO:0000042 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007047 ! midbrain hindbrain boundary neural tube relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000043 @@ -490,9 +491,9 @@ def: "Portion of somite 14 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000044 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000045 @@ -502,8 +503,8 @@ def: "A cell population arising from the dorsolateral aspect of the central nerv xref: TAO:0000045 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007082 ! neural plate border -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000046 @@ -516,7 +517,7 @@ xref: TAO:0000046 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001071 ! presumptive neural retina relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000047 @@ -529,7 +530,7 @@ xref: TAO:0000047 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000048 ! olfactory placode relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000048 @@ -540,9 +541,9 @@ synonym: "olfactory placodes" EXACT PLURAL [] xref: TAO:0000048 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007062 ! olfactory field -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000049 @@ -553,7 +554,7 @@ synonym: "optic recesses" EXACT PLURAL [] xref: TAO:0000049 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000050 @@ -564,9 +565,9 @@ synonym: "optic vesicles" EXACT PLURAL [] xref: TAO:0000050 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000570 ! optic primordium -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000051 @@ -579,8 +580,8 @@ synonym: "ov" EXACT [] xref: TAO:0000051 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000138 ! otic placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000052 @@ -600,9 +601,9 @@ def: "Embryonic structure part of the mesoderm fated to become segmental plate." synonym: "presumptive segmental plates" EXACT PLURAL [] xref: TAO:0000053 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000054 @@ -622,7 +623,7 @@ def: "Swollen region of the anterior foregut, posterior to the mouth and anterio xref: TAO:0000056 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000058 @@ -633,9 +634,9 @@ synonym: "pillow" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000058 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000004 ! anterior axial hypoblast -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000060 ! prechordal plate -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000059 @@ -654,9 +655,9 @@ namespace: zebrafish_anatomy def: "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000060 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001204 ! axial mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000062 @@ -666,10 +667,10 @@ def: "Embryonic structure that gives rise to the forebrain." [GOC:mh, ORCiD:0000 synonym: "presumptive prosencephalon" EXACT [] xref: TAO:0000062 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000063 @@ -683,7 +684,7 @@ synonym: "prospective neuroectoderm" EXACT [] synonym: "prospective vegetal ectoderm" EXACT [] xref: TAO:0000063 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0000064 @@ -694,9 +695,9 @@ synonym: "outer layer optic cup" EXACT [] synonym: "presumptive pigmented epithelia" EXACT PLURAL [] xref: TAO:0000064 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000066 @@ -706,9 +707,9 @@ def: "An inward fold on the surface of the embryonic ectoderm that develops into synonym: "anus" RELATED [] xref: TAO:0000066 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000067 @@ -718,9 +719,9 @@ def: "Intermediate mesoderm that is located beneath the anterior somites and giv synonym: "pronephric primordium" EXACT [ZFIN:ZDB-PUB-000606-4] xref: TAO:0000067 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0001206 ! intermediate mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000068 @@ -730,9 +731,9 @@ def: "Cluster of cells in the neural plate that have the potential to become neu synonym: "proneural clusters" EXACT PLURAL [] xref: TAO:0000068 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000069 @@ -763,9 +764,9 @@ synonym: "Spemann Mangold organizer" EXACT [] synonym: "Spemann's organizer" EXACT [] xref: TAO:0000071 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000072 @@ -782,7 +783,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 5 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000073 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000074 @@ -791,7 +792,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 26 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000074 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000075 @@ -804,7 +805,7 @@ xref: TAO:0000075 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0007042 ! spinal cord neural tube relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000076 @@ -816,7 +817,7 @@ xref: TAO:0000076 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005335 ! swim bladder bud relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000077 @@ -827,8 +828,8 @@ synonym: "tailbud" EXACT [] xref: TAO:0000077 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000078 @@ -849,7 +850,7 @@ xref: TAO:0000079 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000571 ! presumptive telencephalon relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000080 @@ -858,7 +859,7 @@ namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the trigeminal ganglion." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000080 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000081 @@ -866,7 +867,7 @@ name: trunk mesenchyme namespace: zebrafish_anatomy xref: TAO:0000081 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000082 @@ -876,7 +877,7 @@ def: "Vessels that carry blood to the heart." [GOC:cvs, ORCiD:0000-0002-2244-791 synonym: "venous system" RELATED [] xref: TAO:0000082 is_a: ZFA:0005314 ! blood vessel -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000083 @@ -884,7 +885,7 @@ name: ventral mesoderm namespace: zebrafish_anatomy xref: TAO:0000083 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000084 @@ -897,7 +898,7 @@ synonym: "yolk cell" EXACT [] xref: CL:0000428 xref: TAO:0000084 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000085 @@ -913,7 +914,7 @@ synonym: "apical fold pectoral fin" EXACT [] xref: TAO:0000085 xref: TAO:0000736 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec relationship: part_of ZFA:0000141 ! pectoral fin bud [Term] @@ -925,9 +926,9 @@ synonym: "enveloping layer" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000086 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001484 ! superficial blastomere -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000088 @@ -941,8 +942,8 @@ xref: TAO:0000088 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000084 ! yolk relationship: develops_from ZFA:0000541 ! marginal blastomere -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000011 ! Blastula:1k-cell +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000011 ! blastula:1k-cell [Term] id: ZFA:0000089 @@ -953,7 +954,7 @@ synonym: "fin fold actinotrichia" EXACT PLURAL [] synonym: "median fin fold actinotrichium" EXACT [] xref: TAO:0000089 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000040 ! median fin fold [Term] @@ -963,7 +964,7 @@ namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000090 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin [Term] @@ -978,9 +979,9 @@ synonym: "presumptive notochord" EXACT [] xref: TAO:0000091 xref: TAO:0001219 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001204 ! axial mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000092 @@ -990,7 +991,7 @@ def: "Organism subdivision running along the rostral-caudal axis of the early em synonym: "midline" EXACT [] xref: TAO:0000092 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000093 @@ -1001,7 +1002,7 @@ subset: cell_slim synonym: "blastomeres" EXACT PLURAL [] xref: TAO:0000093 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000015 ! Blastula:Dome +relationship: end ZFS:0000015 ! blastula:dome relationship: part_of ZFA:0001175 ! blastodisc [Term] @@ -1015,9 +1016,9 @@ synonym: "posterior blood island" RELATED [] synonym: "posterior ICM" EXACT [] xref: TAO:0000094 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000033 ! intermediate cell mass of mesoderm -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000095 @@ -1030,7 +1031,7 @@ xref: TAO:0000095 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0001216 ! splanchnocranium relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000096 @@ -1047,7 +1048,7 @@ namespace: zebrafish_anatomy def: "Artery originating at the junction of the first two aortic arches and supplying the anterior brain." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000097 is_a: ZFA:0000005 ! artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000098 @@ -1078,7 +1079,7 @@ xref: TAO:0000100 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001442 ! upper rhombic lip relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000101 @@ -1089,7 +1090,7 @@ xref: TAO:0000101 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000574 ! presumptive diencephalon relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000102 @@ -1098,9 +1099,9 @@ namespace: zebrafish_anatomy def: "Region of the median fin fold that develops into the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000102 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000103 @@ -1154,7 +1155,7 @@ xref: TAO:0000105 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000016 ! ectoderm relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000106 @@ -1164,9 +1165,9 @@ def: "The posterior elongated region of the yolk cell that forms during the segm synonym: "yolk extension" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000106 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000084 ! yolk -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000107 @@ -1179,7 +1180,7 @@ is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001678 ! immature eye relationship: part_of ZFA:0001114 ! head relationship: part_of ZFA:0001127 ! visual system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000108 @@ -1189,7 +1190,7 @@ def: "Surface structure involved in locomotion." [TAO:WD] synonym: "fins" EXACT PLURAL [] xref: TAO:0000108 is_a: ZFA:0000292 ! surface structure -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000109 @@ -1201,7 +1202,7 @@ xref: TAO:0000109 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007041 ! forebrain neural tube relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000110 @@ -1218,7 +1219,7 @@ xref: TAO:0000110 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000111 @@ -1228,8 +1229,8 @@ def: "Embryonic structure that forms as a thickened annulus at the blastoderm ri xref: TAO:0000111 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000112 @@ -1243,7 +1244,7 @@ xref: TAO:0000112 is_a: ZFA:0001512 ! anatomical group relationship: develops_from ZFA:0000017 ! endoderm relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000113 @@ -1252,7 +1253,7 @@ namespace: zebrafish_anatomy def: "Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head." [http://www.Biology-Text.com] xref: TAO:0000113 is_a: ZFA:0000393 ! mesenchyme -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000114 @@ -1264,7 +1265,7 @@ is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000360 ! heart tube relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000115 @@ -1276,9 +1277,9 @@ synonym: "rudimentary heart" EXACT [] xref: TAO:0000115 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000028 ! heart primordium -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000116 @@ -1290,7 +1291,7 @@ xref: TAO:0000116 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula relationship: part_of ZFA:0000374 ! lagena -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000117 @@ -1301,9 +1302,9 @@ synonym: "mesendoderm" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000117 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000118 @@ -1315,7 +1316,7 @@ xref: TAO:0000118 is_a: ZFA:0000496 ! compound organ relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000119 @@ -1327,7 +1328,7 @@ synonym: "intermediate cell layer" EXACT [] xref: TAO:0000119 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000120 @@ -1339,7 +1340,7 @@ synonym: "llg" EXACT [] xref: TAO:0000120 is_a: ZFA:0000013 ! cranial ganglion relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000121 @@ -1349,8 +1350,8 @@ synonym: "lateral plate" EXACT [] synonym: "LPM" EXACT [] xref: TAO:0000121 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000122 @@ -1360,10 +1361,10 @@ def: "Ectodermal primordium of the lens of the eye." [ZFIN:ZDB-PUB-961014-576] synonym: "lens placodes" EXACT PLURAL [] xref: TAO:0000122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000016 ! ectoderm relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000123 @@ -1375,7 +1376,7 @@ is_a: ZFA:0001491 ! solid compound organ relationship: develops_from ZFA:0000124 ! liver primordium relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000124 @@ -1386,9 +1387,9 @@ synonym: "liver bud" EXACT [] xref: TAO:0000124 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000125 @@ -1400,7 +1401,7 @@ synonym: "neuromasts mandibular" EXACT PLURAL [] xref: TAO:0000125 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000259 ! mandibular lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000126 @@ -1411,7 +1412,7 @@ synonym: "autocentrum" EXACT [] xref: TAO:0000126 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0001189 ! vertebra -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000127 @@ -1429,7 +1430,7 @@ xref: TAO:0000128 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007039 ! midbrain neural tube relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000130 @@ -1442,7 +1443,7 @@ synonym: "olfactory cavity" EXACT [] xref: TAO:0000130 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000131 @@ -1453,8 +1454,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000131 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000132 ! neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000025 ! segmentation:10-13 somites +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000132 @@ -1465,8 +1466,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000132 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000063 ! presumptive neural plate -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000133 @@ -1477,8 +1478,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000133 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000131 ! neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000135 @@ -1489,7 +1490,7 @@ synonym: "notocord" EXACT [] xref: TAO:0000135 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000091 ! axial chorda mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000136 @@ -1501,7 +1502,7 @@ synonym: "neuromasts otic" EXACT PLURAL [] xref: TAO:0000136 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000464 ! otic lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000137 @@ -1512,9 +1513,9 @@ synonym: "optic stalks" EXACT PLURAL [] xref: TAO:0000137 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007031 ! anterior neural rod -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000138 @@ -1523,7 +1524,7 @@ namespace: zebrafish_anatomy def: "Primordium of the ear epithelium before it hollows into the otic vesicle, present beside the hindbrain rudiment in the mid-segmentation period. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000138 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001138 ! vestibuloauditory system [Term] @@ -1536,7 +1537,7 @@ is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001390 ! pancreatic bud relationship: part_of ZFA:0001371 ! pancreatic system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000141 @@ -1547,8 +1548,8 @@ synonym: "pectoral fin buds" EXACT PLURAL [] xref: TAO:0000141 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001453 ! pectoral fin field -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000142 @@ -1558,7 +1559,7 @@ def: "Nervous structures including ganglia outside of the central nervous system synonym: "pns" EXACT [] xref: TAO:0000142 is_a: ZFA:0000396 ! nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000143 @@ -1569,7 +1570,7 @@ synonym: "retinal photoreceptor layers" EXACT PLURAL [] xref: TAO:0000143 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000144 @@ -1585,7 +1586,7 @@ xref: TAO:0000144 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000064 ! presumptive retinal pigmented epithelium relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000146 @@ -1595,9 +1596,9 @@ def: "Embryonic structure that gives rise to the brain." [GOC:mh, ORCiD:0000-000 synonym: "brain rudiment" EXACT [] xref: TAO:0000146 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000148 @@ -1607,10 +1608,10 @@ def: "Embryonic structure that gives rise to the midbrain." [GOC:mh, ORCiD:0000- synonym: "presumptive mesencephalon" EXACT [] xref: TAO:0000148 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000149 @@ -1620,10 +1621,10 @@ def: "Multi-tissue structure that arises from the heart rudiment and will become xref: TAO:0000149 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000115 ! heart rudiment -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000150 @@ -1634,9 +1635,9 @@ synonym: "pronephric ducts" EXACT PLURAL [] xref: TAO:0000150 is_a: ZFA:0005171 ! duct relationship: develops_from ZFA:0000067 ! pronephric mesoderm -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000151 @@ -1648,10 +1649,10 @@ synonym: "pronephric nephron" EXACT [] xref: TAO:0000151 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000067 ! pronephric mesoderm -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000152 @@ -1663,7 +1664,7 @@ xref: TAO:0000152 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001202 ! optic cup relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000153 @@ -1685,7 +1686,7 @@ xref: TAO:0000154 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001722 ! presumptive sinus venosus relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000155 @@ -1696,9 +1697,9 @@ synonym: "somitic mesoderm" RELATED [] xref: TAO:0000155 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000279 ! segmental plate -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000156 @@ -1707,7 +1708,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 20 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000156 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000157 @@ -1716,7 +1717,7 @@ namespace: zebrafish_anatomy def: "Posteriormost undifferentiated mesodermal component of early tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000157 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000158 @@ -1731,7 +1732,7 @@ is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001581 ! ural centrum 2 relationship: develops_from ZFA:0001583 ! preural centrum 1+ ural centrum 1 relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000159 @@ -1747,7 +1748,7 @@ xref: TAO:0000159 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000160 @@ -1762,7 +1763,7 @@ is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000761 ! basal plate midbrain region relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000161 @@ -1787,8 +1788,8 @@ def: "The ectodermal rudiment of the trigeminal ganglion, distinguishable during synonym: "trigeminal placodes" EXACT PLURAL [] xref: TAO:0000162 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000163 @@ -1798,7 +1799,7 @@ def: "System that removes and collects metabolic waste from the blood while main synonym: "urinary system" RELATED [] xref: TAO:0000163 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000164 @@ -1806,8 +1807,8 @@ name: ventral mesenchyme namespace: zebrafish_anatomy xref: TAO:0000164 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000165 @@ -1838,7 +1839,7 @@ xref: TAO:0000166 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000225 ! lateral crista primordium relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000167 @@ -1858,7 +1859,7 @@ synonym: "am" EXACT [] synonym: "anterior sensory patch" EXACT [] xref: TAO:0000168 is_a: ZFA:0000386 ! macula -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001671 ! macula communis [Term] @@ -1909,7 +1910,7 @@ xref: TAO:0000173 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001712 ! presumptive bulbus arteriosus relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000174 @@ -1959,7 +1960,7 @@ def: "Portion of the fish's body that is posterior to the vent and anterior to t xref: TAO:0000178 is_a: ZFA:0001308 ! organism subdivision relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000179 @@ -1983,7 +1984,7 @@ is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0001286 ! caudal vein plexus relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000181 @@ -2028,7 +2029,7 @@ synonym: "cleithra" EXACT PLURAL [] xref: TAO:0000184 is_a: ZFA:0001590 ! dermal bone relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000185 @@ -2056,7 +2057,7 @@ name: corpus cerebelli namespace: zebrafish_anatomy def: "Brain structure which is one of three parts of the cerebellum and is the entry point for a posterior cerebellar tract that carries cerebellar afferents from many brain stem nuclei. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] synonym: "cerebellar corpus" EXACT [] -synonym: "corpus cerebelli granular layer " EXACT [ZFIN:ZDB-PUB-961014-1280] +synonym: "corpus cerebelli granular layer" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "corpus cerebellum" EXACT PLURAL [] xref: TAO:0000188 is_a: ZFA:0001488 ! multi-tissue structure @@ -2081,7 +2082,7 @@ synonym: "ganglia" EXACT PLURAL [] xref: TAO:0000190 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000191 @@ -2216,7 +2217,7 @@ xref: TAO:0000204 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000017 ! endoderm relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000205 @@ -2229,7 +2230,7 @@ synonym: "LSV" RELATED [] xref: TAO:0000205 is_a: ZFA:0005277 ! skeletal muscle relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000206 @@ -2250,7 +2251,7 @@ namespace: zebrafish_anatomy def: "Musculature part of fin." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000207 is_a: ZFA:0000548 ! musculature system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000208 @@ -2262,7 +2263,7 @@ is_a: ZFA:0000496 ! compound organ relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000209 @@ -2282,7 +2283,7 @@ synonym: "nucleus praeopticus magnocellularis, pars gigantocellularis" EXACT [] xref: TAO:0000210 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000248 ! magnocellular preoptic nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000211 @@ -2317,7 +2318,7 @@ synonym: "habenular nucleus" EXACT [] xref: TAO:0000213 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000214 @@ -2359,7 +2360,7 @@ xref: TAO:0000217 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0000051 ! otic vesicle relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000219 @@ -2381,7 +2382,7 @@ synonym: "lateral semicircular canals" EXACT PLURAL [] synonym: "lateral semicircular duct" EXACT [] xref: TAO:0000220 is_a: ZFA:0000431 ! semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000221 @@ -2434,9 +2435,9 @@ def: "Is an otic epithelium that will mature into the lateral crista." [GOC:ymb, synonym: "lateral crista primordia" EXACT PLURAL [] xref: TAO:0000225 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000226 @@ -2451,7 +2452,7 @@ relationship: overlaps ZFA:0005420 ! autopalatine-lateral ethmoid joint relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000227 @@ -2474,9 +2475,9 @@ synonym: "lateral line primordia" EXACT PLURAL [] synonym: "llp" EXACT [] xref: TAO:0000228 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000229 @@ -2510,7 +2511,7 @@ xref: TAO:0000231 xref: TAO:0001799 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000232 @@ -2521,7 +2522,7 @@ synonym: "lateral semicircular canal primordia" RELATED PLURAL [] synonym: "lateral semicircular canal primordium" RELATED [] xref: TAO:0000232 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000233 @@ -2536,7 +2537,7 @@ synonym: "mandibular valve" EXACT [] xref: TAO:0000233 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000234 @@ -2548,7 +2549,7 @@ xref: TAO:0000234 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula relationship: part_of ZFA:0000559 ! otolith organ -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000235 @@ -2599,7 +2600,7 @@ xref: TAO:0000239 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001537 ! mesocoracoid cartilage relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000240 @@ -2614,7 +2615,7 @@ relationship: overlaps ZFA:0005469 ! hyomandibula-metapterygoid joint relationship: overlaps ZFA:0005486 ! quadrate-metapterygoid joint relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000241 @@ -2632,7 +2633,7 @@ def: "Gonochoristic organism that can produce male gametes." [GOC:mh, ORCiD:0000 xref: CARO:0000027 xref: TAO:0000242 is_a: ZFA:0001094 ! whole organism -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000243 @@ -2646,7 +2647,7 @@ xref: TAO:0000243 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0005227 ! protoneuromast relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000244 @@ -2736,7 +2737,7 @@ synonym: "optic tracts" EXACT PLURAL [] synonym: "tractus opticus" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000252 is_a: ZFA:0000338 ! diencephalic white matter -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000253 @@ -2761,9 +2762,9 @@ comment: During normal development, the exocrine anlage arises from bilateral se synonym: "pancreatic anlage" EXACT [ZFIN:ZDB-PUB-050623-3] xref: TAO:0000254 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000255 @@ -2795,7 +2796,7 @@ synonym: "pectoral fin cartilages" EXACT PLURAL [] xref: TAO:0000257 is_a: ZFA:0001543 ! paired fin cartilage relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000258 @@ -2811,13 +2812,13 @@ relationship: part_of ZFA:0001184 ! pelvic fin id: ZFA:0000259 name: mandibular lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "mandibular lateral lines" EXACT PLURAL [] synonym: "mandibular line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000259 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000260 @@ -2880,7 +2881,7 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become dorsal mesoderm. Determined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000265 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000266 @@ -2903,7 +2904,7 @@ synonym: "stratum nervosum bulbi olfactorii" EXACT [] xref: TAO:0000267 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000268 @@ -2990,7 +2991,7 @@ xref: TAO:0000277 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001704 ! scale primordium relationship: part_of ZFA:0001183 ! dermal superficial region -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000278 @@ -3010,9 +3011,9 @@ synonym: "presomitic mesoderm" EXACT [] synonym: "PSM" EXACT [] xref: TAO:0000279 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000255 ! paraxial mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000280 @@ -3036,7 +3037,7 @@ xref: TAO:0000281 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001099 ! immature hair cell posterior macula relationship: part_of ZFA:0000558 ! posterior macula -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000282 @@ -3047,7 +3048,7 @@ synonym: "sensory systems" EXACT PLURAL [] xref: TAO:0000282 is_a: ZFA:0001439 ! anatomical system relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000284 @@ -3072,7 +3073,7 @@ xref: TAO:0000285 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000286 @@ -3091,7 +3092,7 @@ name: superior caudal dorsal flexor namespace: zebrafish_anatomy def: "Paired, deep caudal fin muscles that originate from the 30th vertebra and extend toward the dorsal base of the caudal fin where they insert broadly on fin rays." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] synonym: "CDS" RELATED [] -synonym: "flexor caudalis dorsalis superioris " EXACT [] +synonym: "flexor caudalis dorsalis superioris" EXACT [] synonym: "superior dorsal flexor" EXACT [] xref: TAO:0000287 is_a: ZFA:0005271 ! flexor muscle @@ -3141,7 +3142,7 @@ def: "Organism subdivision which is the collection of anatomical structures on t synonym: "surface structures" EXACT PLURAL [] xref: TAO:0000292 is_a: ZFA:0001308 ! organism subdivision -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000293 @@ -3175,7 +3176,7 @@ xref: TAO:0000295 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000080 ! trigeminal neural crest relationship: develops_from ZFA:0000162 ! trigeminal placode -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000296 @@ -3204,7 +3205,7 @@ xref: TAO:0000298 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0000066 ! proctodeum relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000299 @@ -3283,7 +3284,7 @@ synonym: "hypothalamic sulcus" RELATED [] xref: TAO:0000305 is_a: ZFA:0001690 ! groove relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000306 @@ -3312,7 +3313,7 @@ is_a: ZFA:0001590 ! dermal bone relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000309 @@ -3322,9 +3323,9 @@ def: "The portion of the YSL that is outside of the blastoderm margin during epi synonym: "E-YSL" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000309 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000013 ! Blastula:Oblong +relationship: start ZFS:0000013 ! blastula:oblong [Term] id: ZFA:0000310 @@ -3345,7 +3346,7 @@ def: "Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. xref: TAO:0000311 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0007049 ! adductor mandibulae -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000312 @@ -3433,7 +3434,7 @@ synonym: "branchiostegal membranes" EXACT PLURAL [] xref: TAO:0000319 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000320 @@ -3475,7 +3476,7 @@ relationship: develops_from ZFA:0001405 ! ethmoid cartilage relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000324 @@ -3523,7 +3524,7 @@ def: "Musculature system of the pharyngeal and head regions." [GOC:cvs, ORCiD:00 synonym: "head muscles" RELATED [] xref: TAO:0000328 is_a: ZFA:0000548 ! musculature system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000329 @@ -3542,7 +3543,7 @@ synonym: "cloaca lumen" EXACT [] xref: TAO:0000330 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000331 @@ -3565,7 +3566,7 @@ is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid relationship: overlaps ZFA:0005470 ! inter-coracoid joint relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000333 @@ -3616,7 +3617,7 @@ synonym: "diencephalic tract/commissure" EXACT [] xref: TAO:0000338 is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000339 @@ -3625,7 +3626,7 @@ namespace: zebrafish_anatomy def: "Anatomical system that processes ingested substances." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000339 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000340 @@ -3679,14 +3680,14 @@ is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon id: ZFA:0000344 name: middle lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "middle lateral lines" EXACT PLURAL [] xref: TAO:0000344 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005118 ! middle lateral line primordium relationship: part_of ZFA:0001470 ! anterior lateral line relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000345 @@ -3763,7 +3764,7 @@ synonym: "stratum cellulare externum bulbi olfactorii" EXACT [] xref: TAO:0000352 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000353 @@ -3795,9 +3796,9 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the midbrain." [GOC:CVS, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000355 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000356 @@ -3827,7 +3828,7 @@ def: "Portion of tissue which is the innermost layer of the corpus cerebelli and xref: TAO:0000358 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000359 @@ -3845,10 +3846,10 @@ def: "Cavitated compound organ that will become the adult heart following loopin xref: TAO:0000360 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000149 ! primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000362 @@ -3891,7 +3892,7 @@ xref: TAO:0000365 is_a: ZFA:0001590 ! dermal bone relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000366 @@ -3990,7 +3991,7 @@ xref: TAO:0000376 is_a: ZFA:0001590 ! dermal bone relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000379 @@ -4050,7 +4051,7 @@ synonym: "levators arcus palatini" EXACT PLURAL [] xref: TAO:0000384 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000385 @@ -4072,7 +4073,7 @@ synonym: "sensory patch" EXACT [] xref: TAO:0000386 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000387 @@ -4086,7 +4087,7 @@ synonym: "nX" EXACT [] synonym: "vagal lobe" RELATED [] is_a: ZFA:0001658 ! hindbrain nucleus relationship: part_of ZFA:0000297 ! vagal lobe -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000388 @@ -4145,7 +4146,7 @@ namespace: zebrafish_anatomy def: "A mesh-like cell arrangement, less compact than an epithelium." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000393 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000394 @@ -4155,7 +4156,7 @@ def: "Portion of tissue which is the outermost layer of the corpus cerebelli and xref: TAO:0000394 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000395 @@ -4175,7 +4176,7 @@ namespace: zebrafish_anatomy def: "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000396 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000397 @@ -4209,12 +4210,12 @@ relationship: part_of ZFA:0001101 ! gustatory system id: ZFA:0000400 name: occipital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "supratemporal lateral line" EXACT [] xref: TAO:0000400 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000401 @@ -4237,7 +4238,7 @@ xref: TAO:0000402 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000079 ! telencephalon relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000403 @@ -4290,7 +4291,7 @@ synonym: "pectoral girdles" EXACT PLURAL [] xref: TAO:0000407 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000408 @@ -4320,9 +4321,9 @@ def: "Is an otic epithelium that will mature into the posterior crista." [GOC:ym synonym: "posterior crista primordia" EXACT PLURAL [] xref: TAO:0000411 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000412 @@ -4333,7 +4334,7 @@ synonym: "posterior semicircular canal primordia" RELATED PLURAL [] synonym: "posterior semicircular canal primordium" RELATED [] xref: TAO:0000412 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000413 @@ -4347,7 +4348,7 @@ is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005272 ! immature gonad relationship: part_of ZFA:0000632 ! reproductive system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000414 @@ -4356,9 +4357,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that is fated to become cephalic mesoderm." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000414 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000415 @@ -4376,7 +4377,7 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become endoderm. Determined by fate mapping." [ZFIN:ZDB-PUB-961014-608] xref: TAO:0000416 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000417 @@ -4388,9 +4389,9 @@ synonym: "presumptive spinal cord neural plate" EXACT [] synonym: "presumptive spinal cord neural rod" EXACT [] xref: TAO:0000417 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0007015 ! posterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000418 @@ -4443,7 +4444,7 @@ is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0005904 ! retroarticular process relationship: overlaps ZFA:0005618 ! anguloarticular-retroarticular joint relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000423 @@ -4455,18 +4456,18 @@ synonym: "rostral cardinal vein" EXACT [] xref: TAO:0000423 is_a: ZFA:0000082 ! vein relationship: part_of ZFA:0000096 ! cardinal system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000424 name: opercular lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "opercular lateral lines" EXACT PLURAL [] xref: TAO:0000424 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000425 @@ -4545,7 +4546,7 @@ synonym: "semicircular duct" EXACT [] xref: TAO:0000431 is_a: ZFA:0007114 ! anatomical conduit relationship: part_of ZFA:0005409 ! pars superior ear -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000433 @@ -4563,7 +4564,7 @@ name: skeletal system namespace: zebrafish_anatomy xref: TAO:0000434 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000435 @@ -4576,7 +4577,7 @@ synonym: "optic nerve" EXACT [] xref: TAO:0000435 is_a: ZFA:0000641 ! cranial nerve relationship: part_of ZFA:0000338 ! diencephalic white matter -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000436 @@ -4608,7 +4609,7 @@ synonym: "phy" EXACT [] xref: TAO:0000438 is_a: ZFA:0000859 ! specialized hemal arch and spine relationship: part_of ZFA:0000557 ! preural 1 vertebra -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000439 @@ -4651,19 +4652,19 @@ synonym: "sn" EXACT [] xref: TAO:0000442 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000443 name: supraorbital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:JCN 421-\:189-198] +def: "One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "supraorbital lateral lines" EXACT PLURAL [] synonym: "supraorbital line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000443 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000444 @@ -4690,7 +4691,7 @@ xref: TAO:0000445 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000446 @@ -4708,7 +4709,7 @@ synonym: "tela choroidea" RELATED [] xref: TAO:0000447 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001355 ! primitive meninx -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000448 @@ -4750,11 +4751,11 @@ synonym: "breathing valve" RELATED [] synonym: "buccal valve" RELATED [] synonym: "maxillary valve" EXACT [] synonym: "upper internal lip" RELATED [ZFIN:ZDB-PUB-060921-12] -synonym: "upper semilunar valve " EXACT [ZFIN:ZDB-PUB-060921-12] +synonym: "upper semilunar valve" EXACT [ZFIN:ZDB-PUB-060921-12] xref: TAO:0000451 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000452 @@ -4778,7 +4779,7 @@ synonym: "vagus nerve" EXACT [] xref: TAO:0000453 is_a: ZFA:0000641 ! cranial nerve relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000454 @@ -4856,7 +4857,7 @@ synonym: "Weberian ossicles" EXACT PLURAL [] xref: TAO:0000461 is_a: ZFA:0001491 ! solid compound organ relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000462 @@ -4881,7 +4882,7 @@ is_a: ZFA:0000172 ! branchial muscle id: ZFA:0000464 name: otic lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "otic lateral lines" EXACT PLURAL [] xref: TAO:0000464 is_a: ZFA:0001469 ! lateral line @@ -4896,7 +4897,7 @@ synonym: "adductor opercula" EXACT [] synonym: "adductor operculae" EXACT PLURAL [] xref: TAO:0000465 is_a: ZFA:0000521 ! hyoid muscle -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000466 @@ -4932,9 +4933,9 @@ def: "Is an otic epithelium that will mature into the anterior crista." [GOC:ymb synonym: "anterior crista primordia" EXACT PLURAL [] xref: TAO:0000468 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000469 @@ -4945,7 +4946,7 @@ synonym: "anterior semicircular canal primordia" RELATED PLURAL [] synonym: "anterior semicircular canal primordium" RELATED [] xref: TAO:0000469 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000470 @@ -4968,7 +4969,7 @@ xref: TAO:0000471 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001718 ! presumptive atrium heart tube relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000472 @@ -5042,7 +5043,7 @@ relationship: develops_from ZFA:0005077 ! vascular cord relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000479 @@ -5140,7 +5141,7 @@ synonym: "ceratobranchial bones" EXACT PLURAL [] xref: TAO:0000488 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000490 @@ -5197,7 +5198,7 @@ synonym: "dermosphenotic" EXACT [] xref: TAO:0000495 is_a: ZFA:0000376 ! infraorbital relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000496 @@ -5209,7 +5210,7 @@ xref: CARO:0000024 xref: TAO:0000496 is_a: ZFA:0000037 ! anatomical structure relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000497 @@ -5227,13 +5228,13 @@ id: ZFA:0000498 name: dilatator operculi namespace: zebrafish_anatomy def: "Mandibular muscle that inserts along the dorsolateral faces of the opercles. Responsible for opercular abduction." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-020703-2, ZFIN:ZDB-PUB-080306-33] -synonym: " dilatator opercula" EXACT [] +synonym: "dilatator opercula" EXACT [] synonym: "dilator opercula" RELATED [] synonym: "dilators operculi" RELATED PLURAL [] xref: TAO:0000498 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000499 @@ -5344,7 +5345,7 @@ def: "Brain structure which is part of the diencephalon and consists of the dors xref: TAO:0000509 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000510 @@ -5370,7 +5371,7 @@ namespace: zebrafish_anatomy def: "Hindbrain nucleus that doesn't project to the spinal cord." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-970218-12] synonym: "lobus facialis" EXACT [] synonym: "LVII" EXACT [ZFIN:ZDB-PUB-961014-1280] -synonym: "tuberculum impar of Herrick " RELATED [] +synonym: "tuberculum impar of Herrick" RELATED [] xref: TAO:0000512 is_a: ZFA:0001658 ! hindbrain nucleus relationship: part_of ZFA:0000545 ! medulla oblongata @@ -5385,7 +5386,7 @@ synonym: "fast muscle cells somite 1" EXACT PLURAL [] synonym: "fast muscle fiber somite 1" EXACT [] xref: TAO:0000513 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 [Term] @@ -5401,7 +5402,7 @@ relationship: overlaps ZFA:0005608 ! frontal-parietal joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000516 @@ -5422,7 +5423,7 @@ xref: TAO:0001352 is_a: ZFA:0001477 ! portion of tissue is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000517 @@ -5497,12 +5498,12 @@ relationship: part_of ZFA:0000542 ! medial column id: ZFA:0000524 name: infraorbital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "infraorbital line" EXACT [] xref: TAO:0000524 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000525 @@ -5523,7 +5524,7 @@ synonym: "intermuscular bones" EXACT PLURAL [] xref: TAO:0000526 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000527 @@ -5559,7 +5560,7 @@ is_a: ZFA:0001490 ! cavitated compound organ relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000530 @@ -5647,7 +5648,7 @@ def: "Hyoid muscle that originates at the ventrolateral margin of the pterotic a synonym: "levator operculae" EXACT [] xref: TAO:0000537 is_a: ZFA:0000521 ! hyoid muscle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000538 @@ -5688,7 +5689,7 @@ subset: cell_slim synonym: "marginal blastomeres" EXACT PLURAL [] xref: TAO:0000541 is_a: ZFA:0000093 ! blastomere -relationship: start ZFS:0000005 ! Cleavage:16-cell +relationship: start ZFS:0000005 ! cleavage:16-cell [Term] id: ZFA:0000542 @@ -5746,7 +5747,7 @@ is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001290 ! stomodeum relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000548 @@ -5755,14 +5756,14 @@ namespace: zebrafish_anatomy def: "Anatomical system consisting of the cardiac, skeletal and smooth muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000548 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000549 name: posttemporal namespace: zebrafish_anatomy def: "Paired fin bone that attaches the pectoral girdle to the skull via two projections contacting the epiotic and intercalar bones, and carry the main laterosensory canal." [GOC:mh, ORCiD:0000-0001-9114-8737] -synonym: "post-temporal " RELATED [] +synonym: "post-temporal" RELATED [] synonym: "postemporal" EXACT [] xref: TAO:0000549 is_a: ZFA:0001590 ! dermal bone @@ -5782,7 +5783,7 @@ xref: TAO:0000550 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000551 @@ -5822,7 +5823,7 @@ xref: TAO:0000554 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0001431 ! primitive olfactory epithelium relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000555 @@ -5836,7 +5837,7 @@ synonym: "opercular cover" RELATED [ZFIN:ZDB-PUB-030304-18] synonym: "operculum" EXACT [] xref: TAO:0000555 is_a: ZFA:0000292 ! surface structure -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000556 @@ -5847,7 +5848,7 @@ synonym: "chiasma opticum" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "optic commissure" EXACT [] xref: TAO:0000556 is_a: ZFA:0000338 ! diencephalic white matter -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000557 @@ -5871,7 +5872,7 @@ synonym: "posterior sensory patch" EXACT [] synonym: "posteromedial macula" EXACT [] xref: TAO:0000558 is_a: ZFA:0000386 ! macula -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001671 ! macula communis [Term] @@ -5883,7 +5884,7 @@ synonym: "otolith organs" EXACT PLURAL [] xref: TAO:0000559 is_a: ZFA:0001490 ! cavitated compound organ relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000560 @@ -5921,7 +5922,7 @@ is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001000 ! mesenchyme pectoral fin relationship: has_developmental_contribution_from ZFA:0005924 ! middle migratory muscle precursor stream relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000564 @@ -5943,7 +5944,7 @@ synonym: "pelvic girdles" EXACT PLURAL [] xref: TAO:0000565 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000566 @@ -5961,7 +5962,7 @@ xref: TAO:0000566 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000411 ! posterior crista primordium relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000567 @@ -5982,7 +5983,7 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become blood. Determined by marker expression." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000568 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000569 @@ -5992,10 +5993,10 @@ def: "Embryonic structure that gives rise to the hindbrain." [GOC:mh, ORCiD:0000 synonym: "presumptive rhombencephalon" EXACT [] xref: TAO:0000569 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007015 ! posterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000570 @@ -6006,9 +6007,9 @@ def: "Portion of tissue that is part of the anterior neural keel and will form t synonym: "eye field" EXACT [] xref: TAO:0000570 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000571 @@ -6017,9 +6018,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the telencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000571 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000573 @@ -6030,7 +6031,7 @@ synonym: "stratum cellulare internum bulbi olfactorii" EXACT [] xref: TAO:0000573 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000574 @@ -6039,9 +6040,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the diencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000574 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000575 @@ -6060,7 +6061,7 @@ relationship: overlaps ZFA:0005613 ! basioccipital-prootic joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000576 @@ -6076,7 +6077,7 @@ relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000577 @@ -6145,7 +6146,7 @@ namespace: zebrafish_anatomy xref: TAO:0000582 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000583 @@ -6157,7 +6158,7 @@ xref: TAO:0000583 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000585 @@ -6166,7 +6167,7 @@ namespace: zebrafish_anatomy def: "Cranial cartilage which is a small median cartilage located between the premaxillae and anterodorsal to the ethmoid." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000585 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000586 @@ -6179,7 +6180,7 @@ synonym: "pu2" EXACT [] synonym: "third last vertebra" EXACT [] xref: TAO:0000586 is_a: ZFA:0000734 ! preural vertebra -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000587 @@ -6202,7 +6203,7 @@ namespace: zebrafish_anatomy def: "The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)" [GOC:mh, ORCiD:0000-0001-9114-8737] synonym: "auditory ganglion" EXACT [] synonym: "gVIII" EXACT [] -synonym: "octaval ganglion " EXACT [] +synonym: "octaval ganglion" EXACT [] synonym: "sag" EXACT [] synonym: "statoacoustic ganglia" EXACT PLURAL [] xref: TAO:0000588 @@ -6210,7 +6211,7 @@ is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000138 ! otic placode relationship: develops_from ZFA:0000762 ! facio-acoustic neural crest relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000589 @@ -6220,7 +6221,7 @@ def: "Anatomical groove which separates the dorsal and medial zones of dorsal te xref: TAO:0000589 is_a: ZFA:0001690 ! groove relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000590 @@ -6298,7 +6299,7 @@ synonym: "telencephalic tract/commissure" EXACT [] xref: TAO:0000597 is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000598 @@ -6316,7 +6317,7 @@ id: ZFA:0000599 name: torus semicircularis namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the midbrain and develops from the alar plate. The torus semicircularis is located dorsal to the lateral tegmentum where it extends into the medial tectal ventricle and receives ascending sensory octavolateralis input." [GOC:mh, ORCiD:0000-0001-9114-8737] -synonym: "semicircular torus " EXACT [] +synonym: "semicircular torus" EXACT [] xref: TAO:0000599 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region @@ -6405,7 +6406,7 @@ id: ZFA:0000608 name: ventral transverse namespace: zebrafish_anatomy synonym: "transverse ventralis" EXACT [] -synonym: "transversus ventralis " EXACT [] +synonym: "transversus ventralis" EXACT [] xref: TAO:0000608 is_a: ZFA:0000172 ! branchial muscle @@ -6457,7 +6458,7 @@ xref: TAO:0000614 is_a: ZFA:0005269 ! abductor muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000615 @@ -6478,7 +6479,7 @@ xref: TAO:0000616 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000617 @@ -6518,7 +6519,7 @@ xref: TAO:0000619 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000468 ! anterior crista primordium relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000620 @@ -6533,7 +6534,7 @@ relationship: overlaps ZFA:0005420 ! autopalatine-lateral ethmoid joint relationship: overlaps ZFA:0005421 ! autopalatine-maxillary joint relationship: overlaps ZFA:0005422 ! autopalatine-vomer joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000621 @@ -6547,7 +6548,7 @@ relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage relationship: overlaps ZFA:0005486 ! quadrate-metapterygoid joint relationship: overlaps ZFA:0005616 ! quadrate-entopterygoid joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000622 @@ -6560,7 +6561,7 @@ is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0005119 ! barbel primordium relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0000623 @@ -6614,7 +6615,7 @@ def: "Fin musculature that is part of the caudal fin. The musculature is compo xref: TAO:0000628 is_a: ZFA:0000207 ! fin musculature relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000629 @@ -6655,7 +6656,7 @@ namespace: zebrafish_anatomy def: "Anatomical system that has as its parts the organs concerned with reproduction." [UBERON:curator] xref: TAO:0000632 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000633 @@ -6699,7 +6700,7 @@ synonym: "crista cerebellaris molecular layer" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000636 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000291 ! medial octavolateralis nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000637 @@ -6709,7 +6710,7 @@ def: "Postcranial axial cartilage and Weberian ossicle that is located dorsal to xref: TAO:0000637 is_a: ZFA:0001457 ! postcranial axial cartilage relationship: part_of ZFA:0000461 ! Weberian ossicle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000638 @@ -6741,7 +6742,7 @@ xref: TAO:0000640 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001688 ! corneal primordium relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000641 @@ -6857,7 +6858,7 @@ synonym: "radix dorsalis" EXACT [] xref: TAO:0000652 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005578 ! spinal nerve root -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000653 @@ -6945,7 +6946,7 @@ relationship: overlaps ZFA:0005423 ! basioccipital-exoccipital joint relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000662 @@ -6978,7 +6979,7 @@ synonym: "nervus facialis" EXACT [] xref: TAO:0000664 is_a: ZFA:0000641 ! cranial nerve relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000665 @@ -6999,7 +7000,7 @@ xref: TAO:0000666 is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0000667 ! gill filament relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000667 @@ -7010,7 +7011,7 @@ synonym: "gill filaments" EXACT PLURAL [] xref: TAO:0000667 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000668 @@ -7023,7 +7024,7 @@ synonym: "nervus glossopharyngeus" EXACT [] xref: TAO:0000668 is_a: ZFA:0000641 ! cranial nerve relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000669 @@ -7056,7 +7057,7 @@ def: "A connective tissue partition developing at the apex of the chevron-shaped synonym: "horizontal septum" EXACT [] xref: TAO:0000671 is_a: ZFA:0001089 ! myoseptum -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000672 @@ -7080,8 +7081,8 @@ synonym: "HA" EXACT [] xref: TAO:0000673 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000674 @@ -7127,7 +7128,7 @@ xref: TAO:0000678 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001098 ! immature hair cell anterior macula relationship: part_of ZFA:0000168 ! anterior macula -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000679 @@ -7199,7 +7200,7 @@ xref: TAO:0000685 is_a: ZFA:0005269 ! abductor muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000686 @@ -7232,7 +7233,7 @@ synonym: "support cells" RELATED PLURAL [] xref: TAO:0000688 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0000689 @@ -7294,7 +7295,7 @@ xref: TAO:0000694 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005138 ! dental organ relationship: part_of ZFA:0001239 ! ceratobranchial 5 bone -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000695 @@ -7305,7 +7306,7 @@ synonym: "labial cavities" EXACT PLURAL [] xref: TAO:0000695 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000696 @@ -7329,7 +7330,7 @@ synonym: "CN-V" EXACT [] synonym: "trigeminal nerve" EXACT [] xref: TAO:0000697 is_a: ZFA:0000641 ! cranial nerve -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000698 @@ -7341,7 +7342,7 @@ is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001169 ! vertebra 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000699 @@ -7373,7 +7374,7 @@ xref: TAO:0000701 is_a: ZFA:0005275 ! arrector muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000702 @@ -7411,7 +7412,7 @@ synonym: "ventral roots" EXACT PLURAL [] xref: TAO:0000705 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005578 ! spinal nerve root -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000706 @@ -7422,7 +7423,7 @@ xref: TAO:0000706 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005737 ! intestinal rod relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000707 @@ -7470,9 +7471,9 @@ synonym: "DEL cells" EXACT PLURAL [] xref: TAO:0000711 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001473 ! deep blastomere -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000712 @@ -7482,9 +7483,9 @@ def: "The portion of the YSL that lies deep to the blastoderm during epiboly." [ synonym: "I-YSL" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000712 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000013 ! Blastula:Oblong +relationship: start ZFS:0000013 ! blastula:oblong [Term] id: ZFA:0000713 @@ -7539,7 +7540,7 @@ namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000717 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold [Term] @@ -7550,7 +7551,7 @@ def: "The epaxial region of somite 27 derived body wall muscle. The epaxial regi xref: TAO:0000718 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000719 @@ -7561,9 +7562,9 @@ subset: cell_slim synonym: "slow muscle cells somite 21" EXACT PLURAL [] xref: TAO:0000719 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000720 @@ -7574,9 +7575,9 @@ subset: cell_slim synonym: "slow muscle cells somite 24" EXACT PLURAL [] xref: TAO:0000720 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000721 @@ -7587,9 +7588,9 @@ subset: cell_slim synonym: "slow muscle cells somite 27" EXACT PLURAL [] xref: TAO:0000721 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000722 @@ -7600,9 +7601,9 @@ subset: cell_slim synonym: "slow muscle cells somite 3" EXACT PLURAL [] xref: TAO:0000722 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000723 @@ -7613,9 +7614,9 @@ subset: cell_slim synonym: "slow muscle cells somite 5" EXACT PLURAL [] xref: TAO:0000723 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000724 @@ -7626,9 +7627,9 @@ subset: cell_slim synonym: "slow muscle cells somite 8" EXACT PLURAL [] xref: TAO:0000724 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000725 @@ -7637,7 +7638,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 11 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000725 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000726 @@ -7646,7 +7647,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 14 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000726 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000727 @@ -7655,7 +7656,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 17 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000727 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000728 @@ -7681,7 +7682,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 23 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000730 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000731 @@ -7690,7 +7691,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 27 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000731 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000732 @@ -7707,7 +7708,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 7 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000733 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000734 @@ -7719,7 +7720,7 @@ synonym: "specialized centra/vertebrae" EXACT PLURAL [] xref: TAO:0000734 is_a: ZFA:0000326 ! caudal vertebra relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000735 @@ -7763,7 +7764,7 @@ def: "The epaxial region of somite 11 derived body wall muscle. The epaxial regi xref: TAO:0000739 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000740 @@ -7782,7 +7783,7 @@ def: "The epaxial region of somite 14 derived body wall muscle. The epaxial regi xref: TAO:0000741 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000742 @@ -7792,7 +7793,7 @@ def: "The epaxial region of somite 17 derived body wall muscle. The epaxial regi xref: TAO:0000742 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000743 @@ -7811,7 +7812,7 @@ def: "The epaxial region of somite 22 derived body wall muscle. The epaxial regi xref: TAO:0000744 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000745 @@ -7821,7 +7822,7 @@ def: "The epaxial region of somite 25 derived body wall muscle. The epaxial regi xref: TAO:0000745 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000746 @@ -7831,7 +7832,7 @@ def: "The epaxial region of somite 28 derived body wall muscle. The epaxial regi xref: TAO:0000746 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000747 @@ -7841,7 +7842,7 @@ def: "The epaxial region of somite 30 derived body wall muscle. The epaxial regi xref: TAO:0000747 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000748 @@ -7851,7 +7852,7 @@ def: "The epaxial region of somite 6 derived body wall muscle. The epaxial regio xref: TAO:0000748 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000749 @@ -7861,7 +7862,7 @@ def: "The epaxial region of somite 9 derived body wall muscle. The epaxial regio xref: TAO:0000749 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000750 @@ -7873,9 +7874,9 @@ synonym: "fast muscle cells somite 10" EXACT PLURAL [] synonym: "fast muscle fiber somite 10" EXACT [] xref: TAO:0000750 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000751 @@ -7885,7 +7886,7 @@ def: "The epaxial region of somite 8 derived body wall muscle. The epaxial regio xref: TAO:0000751 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000752 @@ -7897,9 +7898,9 @@ synonym: "fast muscle cells somite 13" EXACT PLURAL [] synonym: "fast muscle fiber somite 13" EXACT [] xref: TAO:0000752 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000753 @@ -7911,9 +7912,9 @@ synonym: "fast muscle cells somite 16" EXACT PLURAL [] synonym: "fast muscle fiber somite 16" EXACT [] xref: TAO:0000753 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000754 @@ -7925,9 +7926,9 @@ synonym: "fast muscle cells somite 19" EXACT PLURAL [] synonym: "fast muscle fiber somite 19" EXACT [] xref: TAO:0000754 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000755 @@ -7939,9 +7940,9 @@ synonym: "fast muscle cells somite 21" EXACT PLURAL [] synonym: "fast muscle fiber somite 21" EXACT [] xref: TAO:0000755 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000756 @@ -7953,9 +7954,9 @@ synonym: "fast muscle cells somite 24" EXACT PLURAL [] synonym: "fast muscle fiber somite 24" EXACT [] xref: TAO:0000756 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000757 @@ -7967,9 +7968,9 @@ synonym: "fast muscle cells somite 27" EXACT PLURAL [] synonym: "fast muscle fiber somite 27" EXACT [] xref: TAO:0000757 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000758 @@ -7981,7 +7982,7 @@ synonym: "fast muscle cells somite 3" EXACT PLURAL [] synonym: "fast muscle fiber somite 3" EXACT [] xref: TAO:0000758 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 [Term] @@ -7994,7 +7995,7 @@ synonym: "fast muscle cells somite 5" EXACT PLURAL [] synonym: "fast muscle fiber somite 5" EXACT [] xref: TAO:0000759 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 [Term] @@ -8007,9 +8008,9 @@ synonym: "fast muscle cells somite 8" EXACT PLURAL [] synonym: "fast muscle fiber somite 8" EXACT [] xref: TAO:0000760 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000761 @@ -8020,9 +8021,9 @@ synonym: "floor plate midbrain" RELATED [] synonym: "floorplate midbrain" RELATED [] xref: TAO:0000761 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000762 @@ -8032,8 +8033,8 @@ def: "Cranial neural crest that gives rise to the facio-acoustic ganglion." [GOC synonym: "facio acoustic neural crest" EXACT [] xref: TAO:0000762 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000763 @@ -8044,10 +8045,10 @@ synonym: "floor plate r2" EXACT [] synonym: "floorplate r2" EXACT [] xref: TAO:0000763 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000764 @@ -8058,10 +8059,10 @@ synonym: "floor plate r5" EXACT [] synonym: "floorplate r5" EXACT [] xref: TAO:0000764 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000765 @@ -8072,10 +8073,10 @@ synonym: "floor plate r8" EXACT [] synonym: "floorplate r8" EXACT [] xref: TAO:0000765 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000766 @@ -8085,7 +8086,7 @@ def: "Portion of tissue which is part of the valvula cerebelli and consists larg xref: TAO:0000766 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000767 @@ -8095,7 +8096,7 @@ def: "The hypaxial region of somite 11 derived body wall muscle. The hypaxial re xref: TAO:0000767 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000768 @@ -8105,7 +8106,7 @@ def: "The hypaxial region of somite 14 derived body wall muscle. The hypaxial re xref: TAO:0000768 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000769 @@ -8115,7 +8116,7 @@ def: "The hypaxial region of somite 17 derived body wall muscle. The hypaxial re xref: TAO:0000769 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000770 @@ -8134,7 +8135,7 @@ def: "The hypaxial region of somite 22 derived body wall muscle. The hypaxial re xref: TAO:0000771 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000772 @@ -8144,7 +8145,7 @@ def: "The hypaxial region of somite 25 derived body wall muscle. The hypaxial re xref: TAO:0000772 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000773 @@ -8156,9 +8157,9 @@ synonym: "fast muscle cells somite 12" EXACT PLURAL [] synonym: "fast muscle fiber somite 12" EXACT [] xref: TAO:0000773 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000774 @@ -8169,7 +8170,7 @@ subset: cell_slim xref: TAO:0000774 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000775 @@ -8180,7 +8181,7 @@ subset: cell_slim xref: TAO:0000775 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000776 @@ -8190,7 +8191,7 @@ def: "The hypaxial region of somite 6 derived body wall muscle. The hypaxial reg xref: TAO:0000776 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000777 @@ -8200,7 +8201,7 @@ def: "The hypaxial region of somite 9 derived body wall muscle. The hypaxial reg xref: TAO:0000777 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000778 @@ -8232,9 +8233,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the diencephalic synonym: "lateral wall diencephalon" EXACT [] xref: TAO:0000780 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000781 @@ -8243,9 +8244,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 1." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000781 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000782 @@ -8254,9 +8255,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000782 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000783 @@ -8265,9 +8266,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000783 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000949 ! rhombomere 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000784 @@ -8279,9 +8280,9 @@ synonym: "fast muscle cells somite 15" EXACT PLURAL [] synonym: "fast muscle fiber somite 15" EXACT [] xref: TAO:0000784 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000785 @@ -8291,9 +8292,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the telencephalic synonym: "lateral wall telencephalon" EXACT [] xref: TAO:0000785 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000786 @@ -8301,9 +8302,9 @@ name: medial migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000786 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000787 @@ -8311,7 +8312,7 @@ name: mesenchyme derived from head neural crest namespace: zebrafish_anatomy xref: TAO:0000787 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000788 @@ -8320,9 +8321,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme part of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000788 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000789 @@ -8332,9 +8333,9 @@ def: "Mesoderm that is part of the pectoral fin bud." [GOC:mh, ORCiD:0000-0001-9 synonym: "mesoderm pectoral fin buds" EXACT PLURAL [] xref: TAO:0000789 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000790 @@ -8346,7 +8347,7 @@ synonym: "muscle pioneers somite 10" EXACT PLURAL [] xref: TAO:0000790 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000791 @@ -8358,7 +8359,7 @@ synonym: "muscle pioneers somite 13" EXACT PLURAL [] xref: TAO:0000791 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000792 @@ -8370,7 +8371,7 @@ synonym: "muscle pioneers somite 16" EXACT PLURAL [] xref: TAO:0000792 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000793 @@ -8382,7 +8383,7 @@ synonym: "muscle pioneers somite 19" EXACT PLURAL [] xref: TAO:0000793 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000794 @@ -8394,7 +8395,7 @@ synonym: "muscle pioneers somite 22" EXACT PLURAL [] xref: TAO:0000794 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000795 @@ -8406,9 +8407,9 @@ synonym: "fast muscle cells somite 18" EXACT PLURAL [] synonym: "fast muscle fiber somite 18" EXACT [] xref: TAO:0000795 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000796 @@ -8420,7 +8421,7 @@ synonym: "muscle pioneers somite 25" EXACT PLURAL [] xref: TAO:0000796 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000797 @@ -8432,7 +8433,7 @@ synonym: "muscle pioneers somite 28" EXACT PLURAL [] xref: TAO:0000797 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000798 @@ -8444,7 +8445,7 @@ synonym: "muscle pioneers somite 30" EXACT PLURAL [] xref: TAO:0000798 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000799 @@ -8456,7 +8457,7 @@ synonym: "muscle pioneers somite 6" EXACT PLURAL [] xref: TAO:0000799 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000800 @@ -8468,7 +8469,7 @@ synonym: "muscle pioneers somite 9" EXACT PLURAL [] xref: TAO:0000800 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000801 @@ -8478,9 +8479,9 @@ def: "Portion of somite 11 that gives rise to body wall muscle masses." [ZFIN:ZD subset: cell_slim xref: TAO:0000801 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000802 @@ -8490,9 +8491,9 @@ def: "Portion of somite 15 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000802 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000803 @@ -8502,9 +8503,9 @@ def: "Portion of somite 18 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000803 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000804 @@ -8514,9 +8515,9 @@ def: "Portion of somite 20 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000804 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000805 @@ -8526,9 +8527,9 @@ def: "Portion of somite 23 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000805 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000806 @@ -8540,21 +8541,21 @@ synonym: "fast muscle cells somite 20" EXACT PLURAL [] synonym: "fast muscle fiber somite 20" EXACT [] xref: TAO:0000806 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000807 name: myotome somite 26 namespace: zebrafish_anatomy -def: "Portion of somite 16 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] +def: "Portion of somite 26 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] subset: cell_slim xref: TAO:0000807 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000808 @@ -8564,9 +8565,9 @@ def: "Portion of somite 29 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000808 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000809 @@ -8576,9 +8577,9 @@ def: "Portion of somite 4 that gives rise to body wall muscle masses." [GOC:ymb, subset: cell_slim xref: TAO:0000809 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000810 @@ -8588,9 +8589,9 @@ def: "Portion of somite 7 that gives rise to body wall muscle masses." [GOC:ymb, subset: cell_slim xref: TAO:0000810 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000811 @@ -8600,8 +8601,8 @@ def: "Cranial neural crest that is part of the diencephalon." [GOC:ymb, ORCiD:00 synonym: "diencephalic neural crest" EXACT [] xref: TAO:0000811 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000812 @@ -8610,8 +8611,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that is part of the telencephalon." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0000812 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000813 @@ -8623,7 +8624,7 @@ synonym: "neuromasts infraorbital" EXACT PLURAL [] xref: TAO:0000813 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000524 ! infraorbital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000814 @@ -8635,7 +8636,7 @@ synonym: "neuromasts opercular" EXACT PLURAL [] xref: TAO:0000814 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000424 ! opercular lateral line -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000815 @@ -8653,7 +8654,7 @@ def: "The epithelium that lines the oral cavity. The oral epithelium epithelial xref: TAO:0000816 is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000817 @@ -8665,9 +8666,9 @@ synonym: "fast muscle cells somite 23" EXACT PLURAL [] synonym: "fast muscle fiber somite 23" EXACT [] xref: TAO:0000817 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000818 @@ -8677,7 +8678,7 @@ def: "Vagal neural crest is adjacent to the first seven somites gives rise to bo synonym: "post-otic neural crest" EXACT [] xref: TAO:0000818 is_a: ZFA:0000045 ! neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000819 @@ -8706,8 +8707,8 @@ subset: cell_slim synonym: "primary neurons hindbrain" EXACT PLURAL [] xref: TAO:0000821 is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000822 @@ -8736,10 +8737,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 2." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000824 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000825 @@ -8748,10 +8749,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000825 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000826 @@ -8774,9 +8775,9 @@ synonym: "fast muscle cells somite 26" EXACT PLURAL [] synonym: "fast muscle fiber somite 26" EXACT [] xref: TAO:0000827 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000828 @@ -8785,10 +8786,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000828 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000829 @@ -8798,7 +8799,7 @@ def: "Ventromedial region of somite 11 that will form vertebral cartilages and c xref: TAO:0000829 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000830 @@ -8808,7 +8809,7 @@ def: "Ventromedial region of somite 14 that will form vertebral cartilages and c xref: TAO:0000830 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000831 @@ -8818,7 +8819,7 @@ def: "Ventromedial region of somite 17 that will form vertebral cartilages and c xref: TAO:0000831 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000832 @@ -8828,7 +8829,7 @@ def: "Ventromedial region of somite 2 that will form vertebral cartilages and co xref: TAO:0000832 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000833 @@ -8838,7 +8839,7 @@ def: "Ventromedial region of somite 22 that will form vertebral cartilages and c xref: TAO:0000833 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000834 @@ -8848,7 +8849,7 @@ def: "Ventromedial region of somite 25 that will form vertebral cartilages and c xref: TAO:0000834 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000835 @@ -8858,7 +8859,7 @@ def: "Ventromedial region of somite 28 that will form vertebral cartilages and c xref: TAO:0000835 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000836 @@ -8868,7 +8869,7 @@ def: "Ventromedial region of somite 30 that will form vertebral cartilages and c xref: TAO:0000836 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000837 @@ -8878,7 +8879,7 @@ def: "Ventromedial region of somite 6 that will form vertebral cartilages and co xref: TAO:0000837 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000838 @@ -8890,9 +8891,9 @@ synonym: "fast muscle cells somite 29" EXACT PLURAL [] synonym: "fast muscle fiber somite 29" EXACT [] xref: TAO:0000838 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000839 @@ -8902,7 +8903,7 @@ def: "Ventromedial region of somite 9 that will form vertebral cartilages and co xref: TAO:0000839 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000840 @@ -8913,9 +8914,9 @@ subset: cell_slim synonym: "slow muscle cells somite 11" EXACT PLURAL [] xref: TAO:0000840 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000841 @@ -8926,9 +8927,9 @@ subset: cell_slim synonym: "slow muscle cells somite 14" EXACT PLURAL [] xref: TAO:0000841 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000842 @@ -8939,9 +8940,9 @@ subset: cell_slim synonym: "slow muscle cells somite 17" EXACT PLURAL [] xref: TAO:0000842 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000843 @@ -8952,9 +8953,9 @@ subset: cell_slim synonym: "slow muscle cells somite 2" EXACT PLURAL [] xref: TAO:0000843 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000844 @@ -8965,9 +8966,9 @@ subset: cell_slim synonym: "slow muscle cells somite 22" EXACT PLURAL [] xref: TAO:0000844 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000845 @@ -8978,9 +8979,9 @@ subset: cell_slim synonym: "slow muscle cells somite 25" EXACT PLURAL [] xref: TAO:0000845 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000846 @@ -8991,9 +8992,9 @@ subset: cell_slim synonym: "slow muscle cells somite 28" EXACT PLURAL [] xref: TAO:0000846 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000847 @@ -9004,9 +9005,9 @@ subset: cell_slim synonym: "slow muscle cells somite 30" EXACT PLURAL [] xref: TAO:0000847 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000848 @@ -9017,9 +9018,9 @@ subset: cell_slim synonym: "slow muscle cells somite 6" EXACT PLURAL [] xref: TAO:0000848 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000849 @@ -9031,7 +9032,7 @@ synonym: "fast muscle cells somite 4" EXACT PLURAL [] synonym: "fast muscle fiber somite 4" EXACT [] xref: TAO:0000849 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 [Term] @@ -9043,9 +9044,9 @@ subset: cell_slim synonym: "slow muscle cells somite 9" EXACT PLURAL [] xref: TAO:0000850 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000851 @@ -9054,7 +9055,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 12 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000851 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000852 @@ -9063,7 +9064,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 15 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000852 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000853 @@ -9072,7 +9073,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 18 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000853 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000854 @@ -9081,7 +9082,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail 21 segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000854 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000855 @@ -9090,7 +9091,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 24 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000855 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000856 @@ -9099,7 +9100,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 28 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000856 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000857 @@ -9116,7 +9117,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 8 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000858 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000859 @@ -9130,7 +9131,7 @@ synonym: "specialized hemal arches and spines" EXACT PLURAL [] xref: TAO:0000859 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000860 @@ -9142,9 +9143,9 @@ synonym: "fast muscle cells somite 7" EXACT PLURAL [] synonym: "fast muscle fiber somite 7" EXACT [] xref: TAO:0000860 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000861 @@ -9176,7 +9177,7 @@ synonym: "dermal bone cranium" EXACT [] xref: TAO:0000863 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000864 @@ -9195,7 +9196,7 @@ def: "The epaxial region of somite 12 derived body wall muscle. The epaxial regi xref: TAO:0000865 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000866 @@ -9205,7 +9206,7 @@ def: "The epaxial region of somite 15 derived body wall muscle. The epaxial regi xref: TAO:0000866 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000867 @@ -9215,7 +9216,7 @@ def: "The epaxial region of somite 18 derived body wall muscle. The epaxial regi xref: TAO:0000867 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000868 @@ -9225,7 +9226,7 @@ def: "The epaxial region of somite 20 derived body wall muscle. The epaxial regi xref: TAO:0000868 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000869 @@ -9235,7 +9236,7 @@ def: "The epaxial region of somite 23 derived body wall muscle. The epaxial regi xref: TAO:0000869 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000870 @@ -9245,7 +9246,7 @@ def: "The epaxial region of somite 26 derived body wall muscle. The epaxial regi xref: TAO:0000870 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000871 @@ -9255,10 +9256,10 @@ def: "Floor plate that is part of the diencephalon." [GOC:mh, ORCiD:0000-0001-91 synonym: "floorplate diencephalon" EXACT [] xref: TAO:0000871 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000872 @@ -9268,7 +9269,7 @@ def: "The epaxial region of somite 29 derived body wall muscle. The epaxial regi xref: TAO:0000872 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000873 @@ -9287,7 +9288,7 @@ def: "The epaxial region of somite 7 derived body wall muscle. The epaxial regio xref: TAO:0000874 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000875 @@ -9308,9 +9309,9 @@ synonym: "fast muscle cells somite 11" EXACT PLURAL [] synonym: "fast muscle fiber somite 11" EXACT [] xref: TAO:0000876 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000877 @@ -9322,9 +9323,9 @@ synonym: "fast muscle cells somite 14" EXACT PLURAL [] synonym: "fast muscle fiber somite 14" EXACT [] xref: TAO:0000877 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000878 @@ -9336,9 +9337,9 @@ synonym: "fast muscle cells somite 17" EXACT PLURAL [] synonym: "fast muscle fiber somite 17" EXACT [] xref: TAO:0000878 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000879 @@ -9350,7 +9351,7 @@ synonym: "fast muscle cells somite 2" EXACT PLURAL [] synonym: "fast muscle fiber somite 2" EXACT [] xref: TAO:0000879 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 [Term] @@ -9363,9 +9364,9 @@ synonym: "fast muscle cells somite 22" EXACT PLURAL [] synonym: "fast muscle fiber somite 22" EXACT [] xref: TAO:0000880 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000881 @@ -9377,9 +9378,9 @@ synonym: "fast muscle cells somite 25" EXACT PLURAL [] synonym: "fast muscle fiber somite 25" EXACT [] xref: TAO:0000881 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000882 @@ -9389,10 +9390,10 @@ def: "Floor plate that is part of the rhombomere 1." [GOC:mh, ORCiD:0000-0001-91 synonym: "floor plate r1" EXACT [] xref: TAO:0000882 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000883 @@ -9404,9 +9405,9 @@ synonym: "fast muscle cells somite 28" EXACT PLURAL [] synonym: "fast muscle fiber somite 28" EXACT [] xref: TAO:0000883 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000884 @@ -9418,9 +9419,9 @@ synonym: "fast muscle cells somite 30" EXACT PLURAL [] synonym: "fast muscle fiber somite 30" EXACT [] xref: TAO:0000884 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000885 @@ -9432,9 +9433,9 @@ synonym: "fast muscle cells somite 6" EXACT PLURAL [] synonym: "fast muscle fiber somite 6" EXACT [] xref: TAO:0000885 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000886 @@ -9446,9 +9447,9 @@ synonym: "fast muscle cells somite 9" EXACT PLURAL [] synonym: "fast muscle fiber somite 9" EXACT [] xref: TAO:0000886 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000887 @@ -9458,10 +9459,10 @@ def: "Floor plate that is part of the neural rod." [GOC:mh, GOC:ymb, ORCiD:0000- synonym: "floorplate neural rod" EXACT [] xref: TAO:0000887 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000888 @@ -9472,10 +9473,10 @@ synonym: "floor plate r3" EXACT [] synonym: "floorplate r3" EXACT [] xref: TAO:0000888 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000889 @@ -9486,10 +9487,10 @@ synonym: "floor plate r6" EXACT [] synonym: "floorplate r6" EXACT [] xref: TAO:0000889 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000890 @@ -9500,10 +9501,10 @@ synonym: "floorplate spinal cord" EXACT [] xref: TAO:0000890 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001434 ! floor plate neural tube -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000891 @@ -9522,7 +9523,7 @@ def: "The hypaxial region of somite 12 derived body wall muscle. The hypaxial re xref: TAO:0000892 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000893 @@ -9533,10 +9534,10 @@ synonym: "floor plate r4" EXACT [] synonym: "floorplate r4" EXACT [] xref: TAO:0000893 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000894 @@ -9546,7 +9547,7 @@ def: "The hypaxial region of somite 15 derived body wall muscle. The hypaxial re xref: TAO:0000894 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000895 @@ -9556,7 +9557,7 @@ def: "The hypaxial region of somite 18 derived body wall muscle. The hypaxial re xref: TAO:0000895 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000896 @@ -9566,7 +9567,7 @@ def: "The hypaxial region of somite 20 derived body wall muscle. The hypaxial re xref: TAO:0000896 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000897 @@ -9576,7 +9577,7 @@ def: "The hypaxial region of somite 23 derived body wall muscle. The hypaxial re xref: TAO:0000897 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000898 @@ -9586,7 +9587,7 @@ def: "The hypaxial region of somite 26 derived body wall muscle. The hypaxial re xref: TAO:0000898 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000899 @@ -9596,7 +9597,7 @@ def: "The hypaxial region of somite 29 derived body wall muscle. The hypaxial re xref: TAO:0000899 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000900 @@ -9615,7 +9616,7 @@ def: "The hypaxial region of somite 7 derived body wall muscle. The hypaxial reg xref: TAO:0000901 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000902 @@ -9644,10 +9645,10 @@ synonym: "floor plate r7" EXACT [] synonym: "floorplate r7" EXACT [] xref: TAO:0000904 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000905 @@ -9655,7 +9656,7 @@ name: lateral mesenchyme derived from mesoderm namespace: zebrafish_anatomy xref: TAO:0000905 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000906 @@ -9665,9 +9666,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the midbrain regi synonym: "lateral wall midbrain" EXACT [] xref: TAO:0000906 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000907 @@ -9676,9 +9677,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 2." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000907 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000908 @@ -9687,9 +9688,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000908 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000909 @@ -9698,9 +9699,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000909 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000153 ! rhombomere 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000910 @@ -9725,9 +9726,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme part of median fin fold." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000912 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000913 @@ -9737,7 +9738,7 @@ def: "Portion of tissue which is part of the valvula cerebelli and contains neur xref: TAO:0000913 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000914 @@ -9747,10 +9748,10 @@ def: "Floor plate that is part of the telencephalon." [GOC:mh, ORCiD:0000-0001-9 synonym: "floorplate telencephalon" EXACT [] xref: TAO:0000914 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000915 @@ -9762,7 +9763,7 @@ synonym: "muscle pioneers somite 11" EXACT PLURAL [] xref: TAO:0000915 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000916 @@ -9774,7 +9775,7 @@ synonym: "muscle pioneers somite 14" EXACT PLURAL [] xref: TAO:0000916 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000917 @@ -9786,7 +9787,7 @@ synonym: "muscle pioneers somite 17" EXACT PLURAL [] xref: TAO:0000917 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000918 @@ -9798,7 +9799,7 @@ synonym: "muscle pioneers somite 20" EXACT PLURAL [] xref: TAO:0000918 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000919 @@ -9810,7 +9811,7 @@ synonym: "muscle pioneers somite 23" EXACT PLURAL [] xref: TAO:0000919 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000920 @@ -9822,7 +9823,7 @@ synonym: "muscle pioneers somite 26" EXACT PLURAL [] xref: TAO:0000920 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000921 @@ -9834,7 +9835,7 @@ synonym: "muscle pioneers somite 29" EXACT PLURAL [] xref: TAO:0000921 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000922 @@ -9857,7 +9858,7 @@ synonym: "muscle pioneers somite 7" EXACT PLURAL [] xref: TAO:0000923 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000924 @@ -9866,7 +9867,7 @@ namespace: zebrafish_anatomy def: "Portion of somite 1 that gives rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000924 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000072 ! somite 1 [Term] @@ -9877,7 +9878,7 @@ def: "The hypaxial region of somite 10 derived body wall muscle. The hypaxial re xref: TAO:0000925 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000926 @@ -9886,9 +9887,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 12 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000926 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000927 @@ -9897,9 +9898,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 16 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000927 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000928 @@ -9908,9 +9909,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 19 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000928 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000929 @@ -9919,9 +9920,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 21 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000929 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000930 @@ -9930,9 +9931,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 24 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000930 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000931 @@ -9941,9 +9942,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 27 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000931 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000932 @@ -9952,9 +9953,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 3 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000932 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000933 @@ -9963,9 +9964,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 5 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000933 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000934 @@ -9974,9 +9975,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 8 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000934 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000935 @@ -9986,8 +9987,8 @@ def: "Neural crest that is part of the midbrain." [GOC:ymb, ORCiD:0000-0002-9900 synonym: "mesencephalic neural crest" EXACT [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0000935 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000936 @@ -9998,7 +9999,7 @@ synonym: "dorsal fin distal radials" EXACT PLURAL [] xref: TAO:0000936 is_a: ZFA:0001647 ! dorsal fin radial relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000937 @@ -10008,7 +10009,7 @@ def: "The hypaxial region of somite 13 derived body wall muscle. The hypaxial re xref: TAO:0000937 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000938 @@ -10021,7 +10022,7 @@ xref: TAO:0000938 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000939 @@ -10033,7 +10034,7 @@ synonym: "neuromasts middle" EXACT PLURAL [] xref: TAO:0000939 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000344 ! middle lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000940 @@ -10046,7 +10047,7 @@ xref: TAO:0000940 is_a: ZFA:0000243 ! neuromast relationship: develops_from ZFA:0001157 ! posterior lateral line primordium relationship: part_of ZFA:0000944 ! posterior lateral line -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000941 @@ -10066,19 +10067,21 @@ def: "Skeleton that consists of the supporting endochondral proximal and distal xref: TAO:0000943 is_a: ZFA:0000027 ! paired fin skeleton relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000944 name: posterior lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880] +def: "One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-110811-14] +synonym: "midbody lateral line" RELATED [] +synonym: "midtrunk line" RELATED [] synonym: "pll" EXACT [] xref: TAO:0000944 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0001157 ! posterior lateral line primordium relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000946 @@ -10088,7 +10091,7 @@ def: "The hypaxial region of somite 16 derived body wall muscle. The hypaxial re xref: TAO:0000946 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000947 @@ -10099,7 +10102,7 @@ synonym: "dorsal fin proximal radials" EXACT PLURAL [] xref: TAO:0000947 is_a: ZFA:0001647 ! dorsal fin radial relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000948 @@ -10128,10 +10131,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 3." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000950 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000951 @@ -10140,10 +10143,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000951 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000952 @@ -10162,7 +10165,7 @@ def: "Ventromedial region of somite 12 that will form vertebral cartilages and c xref: TAO:0000953 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000954 @@ -10172,7 +10175,7 @@ def: "Ventromedial region of somite 15 that will form vertebral cartilages and c xref: TAO:0000954 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000955 @@ -10182,7 +10185,7 @@ def: "Ventromedial region of somite 18 that will form vertebral cartilages and c xref: TAO:0000955 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000956 @@ -10192,7 +10195,7 @@ def: "Ventromedial region of somite 20 that will form vertebral cartilages and c xref: TAO:0000956 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000957 @@ -10202,7 +10205,7 @@ def: "The hypaxial region of somite 19 derived body wall muscle. The hypaxial re xref: TAO:0000957 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000958 @@ -10212,7 +10215,7 @@ def: "Ventromedial region of somite 23 that will form vertebral cartilages and c xref: TAO:0000958 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000959 @@ -10222,7 +10225,7 @@ def: "Ventromedial region of somite 26 that will form vertebral cartilages and c xref: TAO:0000959 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000960 @@ -10232,7 +10235,7 @@ def: "Ventromedial region of somite 29 that will form vertebral cartilages and c xref: TAO:0000960 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000961 @@ -10242,7 +10245,7 @@ def: "Ventromedial region of somite 4 that will form vertebral cartilages and co xref: TAO:0000961 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000962 @@ -10252,7 +10255,7 @@ def: "Ventromedial region of somite 7 that will form vertebral cartilages and co xref: TAO:0000962 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000963 @@ -10263,9 +10266,9 @@ subset: cell_slim synonym: "slow muscle cells somite 1" EXACT PLURAL [] xref: TAO:0000963 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000964 @@ -10276,9 +10279,9 @@ subset: cell_slim synonym: "slow muscle cells somite 12" EXACT PLURAL [] xref: TAO:0000964 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000965 @@ -10289,9 +10292,9 @@ subset: cell_slim synonym: "slow muscle cells somite 15" EXACT PLURAL [] xref: TAO:0000965 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000966 @@ -10302,9 +10305,9 @@ subset: cell_slim synonym: "slow muscle cells somite 18" EXACT PLURAL [] xref: TAO:0000966 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000967 @@ -10315,9 +10318,9 @@ subset: cell_slim synonym: "slow muscle cells somite 20" EXACT PLURAL [] xref: TAO:0000967 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000968 @@ -10327,7 +10330,7 @@ def: "The hypaxial region of somite 21 derived body wall muscle. The hypaxial re xref: TAO:0000968 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000969 @@ -10338,9 +10341,9 @@ subset: cell_slim synonym: "slow muscle cells somite 23" EXACT PLURAL [] xref: TAO:0000969 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000970 @@ -10351,9 +10354,9 @@ subset: cell_slim synonym: "slow muscle cells somite 26" EXACT PLURAL [] xref: TAO:0000970 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000971 @@ -10364,9 +10367,9 @@ subset: cell_slim synonym: "slow muscle cells somite 29" EXACT PLURAL [] xref: TAO:0000971 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000972 @@ -10377,9 +10380,9 @@ subset: cell_slim synonym: "slow muscle cells somite 4" EXACT PLURAL [] xref: TAO:0000972 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000973 @@ -10390,9 +10393,9 @@ subset: cell_slim synonym: "slow muscle cells somite 7" EXACT PLURAL [] xref: TAO:0000973 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000974 @@ -10401,7 +10404,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 10 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000974 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000975 @@ -10410,7 +10413,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 13 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000975 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000976 @@ -10419,7 +10422,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 16 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000976 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000977 @@ -10428,7 +10431,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 19 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000977 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000978 @@ -10437,7 +10440,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 22 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000978 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000979 @@ -10447,7 +10450,7 @@ def: "The hypaxial region of somite 24 derived body wall muscle. The hypaxial re xref: TAO:0000979 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000980 @@ -10456,7 +10459,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 25 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000980 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000981 @@ -10465,7 +10468,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 29 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000981 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000982 @@ -10474,7 +10477,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 6 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000982 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000983 @@ -10483,7 +10486,7 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 9 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000983 is_a: ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000984 @@ -10509,7 +10512,7 @@ def: "The hypaxial region of somite 27 derived body wall muscle. The hypaxial re xref: TAO:0000986 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000987 @@ -10537,7 +10540,7 @@ def: "The hypaxial region of somite 8 derived body wall muscle. The hypaxial reg xref: TAO:0000989 is_a: ZFA:0001085 ! hypaxial myotome region relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000990 @@ -10545,7 +10548,7 @@ name: intermediate mesenchyme namespace: zebrafish_anatomy xref: TAO:0000990 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000991 @@ -10555,7 +10558,7 @@ def: "The epaxial region of somite 10 derived body wall muscle. The epaxial regi xref: TAO:0000991 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000992 @@ -10563,9 +10566,9 @@ name: lateral migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000992 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000993 @@ -10574,9 +10577,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue located at either side of the neural rod." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000993 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000994 @@ -10585,9 +10588,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 3." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000994 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000995 @@ -10596,9 +10599,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000995 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000996 @@ -10607,9 +10610,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the spinal cord." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000996 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000997 @@ -10626,8 +10629,8 @@ name: mesenchyme derived from head mesoderm namespace: zebrafish_anatomy xref: TAO:0000998 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000999 @@ -10635,7 +10638,7 @@ name: mesenchyme derived from trunk neural crest namespace: zebrafish_anatomy xref: TAO:0000999 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001000 @@ -10646,9 +10649,9 @@ synonym: "mesenchyme pectoral fins" EXACT PLURAL [] xref: TAO:0001000 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0000789 ! mesoderm pectoral fin bud -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001001 @@ -10658,7 +10661,7 @@ def: "The epaxial region of somite 13 derived body wall muscle. The epaxial regi xref: TAO:0001001 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001002 @@ -10678,7 +10681,7 @@ synonym: "muscle pioneers somite 12" EXACT PLURAL [] xref: TAO:0001003 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001004 @@ -10690,7 +10693,7 @@ synonym: "muscle pioneers somite 15" EXACT PLURAL [] xref: TAO:0001004 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001005 @@ -10702,7 +10705,7 @@ synonym: "muscle pioneers somite 18" EXACT PLURAL [] xref: TAO:0001005 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001006 @@ -10714,7 +10717,7 @@ synonym: "muscle pioneers somite 21" EXACT PLURAL [] xref: TAO:0001006 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001007 @@ -10726,7 +10729,7 @@ synonym: "muscle pioneers somite 24" EXACT PLURAL [] xref: TAO:0001007 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001008 @@ -10738,7 +10741,7 @@ synonym: "muscle pioneers somite 27" EXACT PLURAL [] xref: TAO:0001008 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001009 @@ -10772,7 +10775,7 @@ synonym: "muscle pioneers somite 8" EXACT PLURAL [] xref: TAO:0001011 is_a: ZFA:0001086 ! muscle pioneer relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001012 @@ -10782,7 +10785,7 @@ def: "The epaxial region of somite 16 derived body wall muscle. The epaxial regi xref: TAO:0001012 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001013 @@ -10791,9 +10794,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 10 that gives rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001013 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001014 @@ -10802,9 +10805,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 13 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001014 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001015 @@ -10813,9 +10816,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 17 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001015 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001016 @@ -10824,9 +10827,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 2 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001016 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001017 @@ -10835,9 +10838,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 22 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001017 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001018 @@ -10846,9 +10849,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 25 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001018 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001019 @@ -10857,9 +10860,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 28 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001019 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001020 @@ -10868,9 +10871,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 30 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001020 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001021 @@ -10879,9 +10882,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 6 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001021 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001022 @@ -10890,9 +10893,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 9 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001022 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001023 @@ -10902,7 +10905,7 @@ def: "The epaxial region of somite 19 derived body wall muscle. The epaxial regi xref: TAO:0001023 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001024 @@ -10911,7 +10914,7 @@ namespace: zebrafish_anatomy def: "Neural crest that is part of the trunk." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001024 is_a: ZFA:0000045 ! neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001025 @@ -10923,7 +10926,7 @@ synonym: "neuromasts occipital" EXACT PLURAL [] xref: TAO:0001025 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000400 ! occipital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001026 @@ -10935,7 +10938,7 @@ synonym: "neuromasts supraorbital" EXACT PLURAL [] xref: TAO:0001026 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0000443 ! supraorbital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001027 @@ -10947,7 +10950,7 @@ synonym: "buccal chamber" EXACT [] xref: TAO:0001027 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001028 @@ -10960,7 +10963,7 @@ synonym: "parhypurapophysis process" EXACT [] xref: TAO:0001028 is_a: ZFA:0000859 ! specialized hemal arch and spine relationship: part_of ZFA:0000438 ! parhypural -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001029 @@ -10972,7 +10975,7 @@ synonym: "inner limiting membranes" EXACT PLURAL [] xref: TAO:0001029 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001030 @@ -10982,7 +10985,7 @@ def: "The epaxial region of somite 21 derived body wall muscle. The epaxial regi xref: TAO:0001030 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001031 @@ -11011,10 +11014,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 1." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001033 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001034 @@ -11023,10 +11026,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001034 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001035 @@ -11035,10 +11038,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001035 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001036 @@ -11048,7 +11051,7 @@ def: "Ventromedial region of somite 10 that will form vertebral cartilages and c xref: TAO:0001036 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001037 @@ -11058,7 +11061,7 @@ def: "Ventromedial region of somite 13 that will form vertebral cartilages and c xref: TAO:0001037 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001038 @@ -11068,7 +11071,7 @@ def: "Ventromedial region of somite 16 that will form vertebral cartilages and c xref: TAO:0001038 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001039 @@ -11078,7 +11081,7 @@ def: "Ventromedial region of somite 19 that will form vertebral cartilages and c xref: TAO:0001039 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001040 @@ -11088,7 +11091,7 @@ def: "The epaxial region of somite 24 derived body wall muscle. The epaxial regi xref: TAO:0001040 is_a: ZFA:0001084 ! epaxial myotome region relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001041 @@ -11098,7 +11101,7 @@ def: "Ventromedial region of somite 21 that will form vertebral cartilages and c xref: TAO:0001041 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001042 @@ -11108,7 +11111,7 @@ def: "Ventromedial region of somite 24 that will form vertebral cartilages and c xref: TAO:0001042 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001043 @@ -11118,7 +11121,7 @@ def: "Ventromedial region of somite 27 that will form vertebral cartilages and c xref: TAO:0001043 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001044 @@ -11128,7 +11131,7 @@ def: "Ventromedial region of somite 3 that will form vertebral cartilages and co xref: TAO:0001044 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001045 @@ -11138,7 +11141,7 @@ def: "Ventromedial region of somite 5 that will form vertebral cartilages and co xref: TAO:0001045 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001046 @@ -11148,7 +11151,7 @@ def: "Ventromedial region of somite 8 that will form vertebral cartilages and co xref: TAO:0001046 is_a: ZFA:0001080 ! sclerotome relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001047 @@ -11159,9 +11162,9 @@ subset: cell_slim synonym: "slow muscle cells somite 10" EXACT PLURAL [] xref: TAO:0001047 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001048 @@ -11172,9 +11175,9 @@ subset: cell_slim synonym: "slow muscle cells somite 13" EXACT PLURAL [] xref: TAO:0001048 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001049 @@ -11185,9 +11188,9 @@ subset: cell_slim synonym: "slow muscle cells somite 16" EXACT PLURAL [] xref: TAO:0001049 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001050 @@ -11198,9 +11201,9 @@ subset: cell_slim synonym: "slow muscle cells somite 19" EXACT PLURAL [] xref: TAO:0001050 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001051 @@ -11212,9 +11215,9 @@ synonym: "posterior cerebral carotid artery" EXACT [] synonym: "posterior rami of the cerebral carotid artery" EXACT [] xref: TAO:0001051 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005081 ! internal carotid artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001052 @@ -11225,9 +11228,9 @@ synonym: "medial head vein" EXACT [] synonym: "PHBC" EXACT [] xref: TAO:0001052 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001053 @@ -11237,8 +11240,8 @@ def: "Artery that originates as rostral extensions of the paired lateral dorsal synonym: "PICA" EXACT [] xref: TAO:0001053 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001054 @@ -11248,8 +11251,8 @@ def: "Connect the outflow of the aortic arches to the dorsal aorta. The place wh synonym: "LDA" EXACT [] xref: TAO:0001054 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001055 @@ -11260,10 +11263,10 @@ synonym: "pronephric duct openings" EXACT PLURAL [] synonym: "urogenital opening" RELATED [ZFIN:ZDB-PUB-060508-11] xref: TAO:0001055 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct relationship: part_of ZFA:0000330 ! cloacal chamber -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001056 @@ -11275,7 +11278,7 @@ xref: TAO:0001056 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000155 ! somite relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001057 @@ -11286,7 +11289,7 @@ synonym: "ISV" EXACT [] xref: TAO:0001057 is_a: ZFA:0000082 ! vein is_a: ZFA:0001285 ! intersegmental vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001058 @@ -11299,7 +11302,7 @@ xref: TAO:0001058 is_a: ZFA:0005597 ! median fin relationship: develops_from ZFA:0001069 ! ventral fin fold relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001059 @@ -11312,9 +11315,9 @@ synonym: "CrDI" EXACT [] synonym: "rostral division of the internal carotid artery" EXACT [] xref: TAO:0001059 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005081 ! internal carotid artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001060 @@ -11324,7 +11327,7 @@ def: "Basidorsals are bilaterally paired cartilages on the dorsolateral side of synonym: "arcualia" RELATED [] xref: TAO:0001060 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001061 @@ -11335,7 +11338,7 @@ synonym: "intersegmental arteries" EXACT PLURAL [] xref: TAO:0001061 is_a: ZFA:0000005 ! artery is_a: ZFA:0001285 ! intersegmental vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001062 @@ -11345,8 +11348,8 @@ def: "Artery that branches dorsally from the cranial division of the internal ca synonym: "PMsA" EXACT [] xref: TAO:0001062 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001063 @@ -11354,9 +11357,9 @@ name: posterior caudal vein namespace: zebrafish_anatomy xref: TAO:0001063 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001064 @@ -11368,7 +11371,7 @@ synonym: "neuromere" RELATED [] synonym: "rhombomeres" EXACT PLURAL [] xref: TAO:0001064 is_a: ZFA:0001328 ! neuromere -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000029 ! hindbrain [Term] @@ -11377,8 +11380,8 @@ name: lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001065 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001066 @@ -11390,7 +11393,7 @@ xref: TAO:0001066 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001060 ! basidorsal relationship: part_of ZFA:0001189 ! vertebra -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001067 @@ -11401,9 +11404,9 @@ synonym: "ACeV" EXACT [] synonym: "rostral cerebral vein" EXACT [] xref: TAO:0001067 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001068 @@ -11414,8 +11417,8 @@ synonym: "MsA" EXACT [] xref: TAO:0001068 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001062 ! primitive mesencephalic artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001069 @@ -11427,9 +11430,9 @@ synonym: "tail fin fold" EXACT [] synonym: "ventral fin" EXACT [] xref: TAO:0001069 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001070 @@ -11439,9 +11442,9 @@ def: "Presumptive structure part of the intermediate mesoderm, that is fated to synonym: "nephron primordium" EXACT [] xref: TAO:0001070 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001206 ! intermediate mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001071 @@ -11452,9 +11455,9 @@ synonym: "inner layer optic cup" EXACT [] synonym: "presumptive retinas" EXACT PLURAL [] xref: TAO:0001071 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001072 @@ -11466,7 +11469,7 @@ xref: TAO:0001072 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001081 ! thyroid primordium relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001073 @@ -11475,7 +11478,7 @@ namespace: zebrafish_anatomy def: "Vasculature that runs along the rostral-caudal axis of the fish." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001073 is_a: ZFA:0005249 ! vasculature -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001074 @@ -11487,7 +11490,7 @@ synonym: "taste buds" EXACT PLURAL [] xref: TAO:0001074 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001075 @@ -11498,7 +11501,7 @@ synonym: "choroidal fissures" EXACT PLURAL [] xref: TAO:0001075 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001076 @@ -11512,7 +11515,7 @@ xref: TAO:0001076 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005738 ! intestinal bulb primordium relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001077 @@ -11524,9 +11527,9 @@ xref: TAO:0001077 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000818 ! vagal neural crest relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001078 @@ -11537,7 +11540,7 @@ xref: TAO:0001078 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001077 ! thymus primordium relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001079 @@ -11548,7 +11551,7 @@ synonym: "blood vessel" RELATED [] xref: TAO:0001079 is_a: ZFA:0001490 ! cavitated compound organ is_a: ZFA:0005249 ! vasculature -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001080 @@ -11559,8 +11562,8 @@ synonym: "sclerotomes" EXACT PLURAL [] xref: TAO:0001080 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001081 @@ -11571,9 +11574,9 @@ synonym: "thyroid primordia" EXACT PLURAL [] xref: TAO:0001081 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001082 @@ -11582,9 +11585,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is posterior to the developing notochord during tail bud extension." [ZFIN:ZDB-PUB-970723-15] xref: TAO:0001082 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000077 ! tail bud -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001083 @@ -11595,7 +11598,7 @@ synonym: "ventricular zones" EXACT PLURAL [] xref: TAO:0001083 is_a: ZFA:0000098 ! proliferative region relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001084 @@ -11604,9 +11607,9 @@ namespace: zebrafish_anatomy synonym: "epaxial myotome regions" EXACT PLURAL [] xref: TAO:0001084 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001085 @@ -11615,9 +11618,9 @@ namespace: zebrafish_anatomy synonym: "hypaxial muscle" EXACT [] xref: TAO:0001085 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001086 @@ -11630,9 +11633,9 @@ synonym: "non migratory adaxial cells" EXACT [] xref: TAO:0001086 is_a: ZFA:0009114 ! muscle cell relationship: develops_from ZFA:0000003 ! adaxial cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001089 @@ -11643,7 +11646,7 @@ synonym: "myosepta" EXACT PLURAL [] xref: TAO:0001089 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001093 @@ -11652,8 +11655,8 @@ namespace: zebrafish_anatomy def: "Annotation with this anatomy term indicates that a structure was not specified by the author." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001093 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001094 @@ -11675,9 +11678,9 @@ synonym: "immature sensory patch" EXACT [] synonym: "immature sensory patches" EXACT PLURAL [] xref: TAO:0001095 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000051 ! otic vesicle -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001096 @@ -11687,9 +11690,9 @@ def: "Is an otic sensory epithelium that will develop into the mature anterior m synonym: "immature anterior maculae" EXACT PLURAL [] xref: TAO:0001096 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001095 ! immature macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001097 @@ -11699,9 +11702,9 @@ def: "Is an otic sensory epithelium that will develop into the mature posterior synonym: "immature posterior maculae" EXACT PLURAL [] xref: TAO:0001097 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001095 ! immature macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001098 @@ -11712,9 +11715,9 @@ subset: cell_slim synonym: "immature sensory hair cells anterior macula" EXACT PLURAL [] xref: TAO:0001098 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001096 ! immature anterior macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001099 @@ -11725,9 +11728,9 @@ subset: cell_slim synonym: "immature sensory hair cells posterior macula" EXACT PLURAL [] xref: TAO:0001099 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001097 ! immature posterior macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001100 @@ -11737,7 +11740,7 @@ def: "A duct that carries bile from the liver to the intestine." [GOC:cvs, ORCiD xref: TAO:0001100 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001101 @@ -11746,7 +11749,7 @@ namespace: zebrafish_anatomy def: "Sensory system that uses taste buds to sense chemical compounds." [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0001101 is_a: ZFA:0000282 ! sensory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001104 @@ -11755,9 +11758,9 @@ namespace: zebrafish_anatomy xref: TAO:0001104 is_a: ZFA:0000017 ! endoderm disjoint_from: ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001105 @@ -11767,7 +11770,7 @@ def: "Anatomical structure that is part of the embryo and is comprised of portio synonym: "embryonic structures" EXACT PLURAL [] xref: TAO:0001105 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001094 ! whole organism [Term] @@ -11779,10 +11782,10 @@ synonym: "pharyngeal pouches" EXACT PLURAL [] xref: TAO:0001106 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001306 ! pharyngeal arch -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001107 @@ -11793,9 +11796,9 @@ synonym: "internal gill buds" EXACT PLURAL [] xref: TAO:0001107 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001108 @@ -11821,7 +11824,7 @@ xref: CL:0000023 xref: TAO:0001109 is_a: ZFA:0009016 ! germ line cell relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001110 @@ -11832,7 +11835,7 @@ synonym: "egg follicle" EXACT [] xref: TAO:0001110 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000403 ! ovary -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001111 @@ -11843,7 +11846,7 @@ synonym: "vitelline envelope" EXACT [] xref: TAO:0001111 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001112 @@ -11854,7 +11857,7 @@ synonym: "granulosa cell layers" EXACT PLURAL [] xref: TAO:0001112 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001113 @@ -11873,7 +11876,7 @@ namespace: zebrafish_anatomy def: "Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001114 is_a: ZFA:0001308 ! organism subdivision -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001115 @@ -11883,7 +11886,7 @@ def: "Organism subdivision which is the part of the body posterior to the head a xref: TAO:0001115 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001116 @@ -11893,8 +11896,8 @@ def: "Portion of embryonic tissue determined by fate mapping to become a structu synonym: "presumptive structures" EXACT PLURAL [] xref: TAO:0001116 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0001117 @@ -11905,7 +11908,7 @@ synonym: "tail" RELATED [] xref: TAO:0001117 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001118 @@ -11920,7 +11923,7 @@ synonym: "urogenital papillae" EXACT PLURAL [] xref: TAO:0001118 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001119 @@ -11932,7 +11935,7 @@ is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000255 ! paraxial mesoderm relationship: develops_from ZFA:0000787 ! mesenchyme derived from head neural crest relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001120 @@ -11942,9 +11945,9 @@ synonym: "neural ectoderm" EXACT [] synonym: "neurectoderm" EXACT [] xref: TAO:0001120 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001121 @@ -11953,8 +11956,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become the shield. Defined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001121 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000018 ! Gastrula:Germ-ring -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000018 ! gastrula:germ-ring +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0001122 @@ -11964,8 +11967,8 @@ def: "Portion of tissue that consists of a layer of cells that form during embry synonym: "embryonic germ layers" EXACT [] xref: TAO:0001122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000038 ! Larval:Day 6 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000038 ! larval:day 6 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001123 @@ -11976,7 +11979,7 @@ synonym: "median fin skeleton" EXACT [] synonym: "unpaired fin skeleton" EXACT [] xref: TAO:0001123 is_a: ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001124 @@ -11986,7 +11989,7 @@ def: "Median fin skeleton located on the dorsal surface of the organism." [TAO:c xref: TAO:0001124 is_a: ZFA:0001123 ! axial fin skeleton relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001125 @@ -11996,7 +11999,7 @@ def: "The dorsal marginal region of the YSL where maternal dorsal determinants l synonym: "Nieuwkoop center" EXACT [] xref: TAO:0001125 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield relationship: part_of ZFA:0000088 ! yolk syncytial layer [Term] @@ -12008,9 +12011,9 @@ synonym: "NEM" EXACT [] synonym: "noninvoluting endocytic marginal cells" EXACT PLURAL [] xref: TAO:0001126 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000017 ! gastrula:50%-epiboly relationship: part_of ZFA:0000038 ! margin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001127 @@ -12019,7 +12022,7 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for the perception of light." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001127 is_a: ZFA:0000282 ! sensory system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001128 @@ -12028,7 +12031,7 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 1" EXACT PLURAL [] xref: TAO:0001128 is_a: ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001129 @@ -12036,7 +12039,7 @@ name: pharyngeal pouches 2-6 namespace: zebrafish_anatomy xref: TAO:0001129 is_a: ZFA:0001106 ! pharyngeal pouch -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001130 @@ -12053,7 +12056,7 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 3" EXACT PLURAL [] xref: TAO:0001131 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001132 @@ -12062,7 +12065,7 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 6" EXACT PLURAL [] xref: TAO:0001132 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001133 @@ -12071,7 +12074,7 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 5" EXACT PLURAL [] xref: TAO:0001133 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001134 @@ -12080,7 +12083,7 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 4" EXACT PLURAL [] xref: TAO:0001134 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001135 @@ -12091,8 +12094,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0001135 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000133 ! neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001136 @@ -12103,7 +12106,7 @@ synonym: "subcutis" EXACT [] xref: TAO:0001136 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001137 @@ -12113,7 +12116,7 @@ def: "Tooth row that is the ventralmost row of teeth on ceratobranchial 5 bone." synonym: "ventral tooth rows" EXACT PLURAL [] xref: TAO:0001137 is_a: ZFA:0001642 ! tooth row -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001138 @@ -12158,7 +12161,7 @@ def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral to xref: TAO:0001142 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001143 @@ -12186,7 +12189,7 @@ def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to too xref: TAO:0001145 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001146 @@ -12222,7 +12225,7 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for olfaction. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001149 is_a: ZFA:0000282 ! sensory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001150 @@ -12260,9 +12263,9 @@ synonym: "dental primordium" EXACT [] synonym: "tooth germ" EXACT [] xref: TAO:0001153 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001174 ! pharyngeal epithelium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001154 @@ -12282,7 +12285,7 @@ xref: TAO:0001155 is_a: ZFA:0001574 ! autonomic nervous system relationship: develops_from ZFA:0001334 ! presumptive enteric nervous system relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001156 @@ -12292,9 +12295,9 @@ def: "Dorsolateral placode that gives rise to the posterior lateral line." [GOC: synonym: "posterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001156 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001157 @@ -12314,7 +12317,7 @@ namespace: zebrafish_anatomy def: "Anatomical system that produces, transports and secretes peptides." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001158 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001159 @@ -12323,7 +12326,7 @@ namespace: zebrafish_anatomy def: "System that provides protection against foreign and abnormal cells and removes cellular debris." [ISBN:0314472304] xref: TAO:0001159 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001160 @@ -12432,7 +12435,7 @@ is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001170 ! vertebra 4 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001172 @@ -12441,10 +12444,10 @@ namespace: zebrafish_anatomy def: "Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus. Located dorsal to the neural tube." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001172 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001191 ! supraneural 2 relationship: part_of ZFA:0001192 ! supraneural 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001173 @@ -12464,7 +12467,7 @@ xref: TAO:0001174 is_a: ZFA:0001495 ! unilaminar epithelium relationship: develops_from ZFA:0001104 ! pharyngeal endoderm relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001175 @@ -12473,7 +12476,7 @@ namespace: zebrafish_anatomy def: "Embryonic structure that is the dome of cytoplasm that segregates from the yolk toward the animal pole during and after the one cell-stage, and which undergoes cleavage." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001175 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000015 ! Blastula:Dome +relationship: end ZFS:0000015 ! blastula:dome [Term] id: ZFA:0001176 @@ -12483,8 +12486,8 @@ def: "Embryonic structure that is composed of the cellular part of the embryo, e xref: TAO:0001176 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001175 ! blastodisc -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0001177 @@ -12492,10 +12495,10 @@ name: roof plate spinal cord region namespace: zebrafish_anatomy xref: TAO:0001177 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001178 @@ -12504,9 +12507,9 @@ namespace: zebrafish_anatomy synonym: "ventral ectoderm" EXACT [] xref: TAO:0001178 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001179 @@ -12517,7 +12520,7 @@ xref: TAO:0001179 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001185 ! periderm relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001180 @@ -12528,7 +12531,7 @@ synonym: "basal epidermal layer" EXACT [] xref: TAO:0001180 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001181 @@ -12538,7 +12541,7 @@ def: "The tissue which lies between the basal stratum and the superficial stratu xref: TAO:0001181 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001182 @@ -12550,7 +12553,7 @@ xref: TAO:0001182 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001186 ! collagenous dermal stroma relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001183 @@ -12561,7 +12564,7 @@ synonym: "stratum laxum" EXACT [] xref: TAO:0001183 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001184 @@ -12572,7 +12575,7 @@ synonym: "pelvic fins" EXACT PLURAL [] xref: TAO:0001184 is_a: ZFA:0005596 ! paired fin relationship: develops_from ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001185 @@ -12583,9 +12586,9 @@ synonym: "EVL" RELATED [] xref: TAO:0001185 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000086 ! EVL -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001186 @@ -12595,9 +12598,9 @@ def: "Acellular anatomical structure that is a layer of collagen fibrils in the synonym: "primary dermal stroma" EXACT [] xref: TAO:0001186 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001187 @@ -12607,9 +12610,9 @@ def: "Embryonic structure that gives rise to the midbrain hindbrain boundary." [ synonym: "presumptive midbrain-hindbrain boundary" EXACT [] xref: TAO:0001187 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001188 @@ -12619,7 +12622,7 @@ def: "The Weberian apparatus consists of the modified anteriormost four vertebra xref: TAO:0001188 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001189 @@ -12630,7 +12633,7 @@ synonym: "vertebrae" EXACT PLURAL [] xref: TAO:0001189 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001190 @@ -12641,7 +12644,7 @@ synonym: "Weberian vertebrae" EXACT PLURAL [] xref: TAO:0001190 is_a: ZFA:0000263 ! precaudal vertebra relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001191 @@ -12680,7 +12683,7 @@ namespace: zebrafish_anatomy def: "Neural crest that is part of the head." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001194 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001195 @@ -12691,7 +12694,7 @@ synonym: "pars distalis" EXACT [] xref: TAO:0001195 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001282 ! adenohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001196 @@ -12709,7 +12712,7 @@ def: "Caudal portion of the adenohypophysis." [ZFIN:ZDB-PUB-080616-4] xref: TAO:0001197 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001282 ! adenohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001198 @@ -12720,8 +12723,8 @@ synonym: "pituitary placode" EXACT [] xref: TAO:0001198 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001178 ! non neural ectoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001199 @@ -12742,7 +12745,7 @@ namespace: zebrafish_anatomy def: "Islands of eosinic cells found on the lateroventral surface of the kidney. Function is thought to be that of the parathyroid gland in other vertebrates, which are lacking in fishes. These cells secrete hypocalcin (teleocalcin) to regulate calcium metabolism." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001200 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001201 @@ -12750,9 +12753,9 @@ name: ventral lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001201 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000083 ! ventral mesoderm -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0001202 @@ -12763,9 +12766,9 @@ synonym: "eye cup" EXACT [] xref: TAO:0001202 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000050 ! optic vesicle -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001203 @@ -12779,7 +12782,7 @@ synonym: "ciliary epithelial zone" EXACT [] xref: TAO:0001203 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001204 @@ -12789,7 +12792,7 @@ def: "Region of the mesoderm that is located along the rostral-caudal axis of th xref: TAO:0001204 is_a: ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0001378 ! axial hypoblast -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001205 @@ -12801,7 +12804,7 @@ xref: TAO:0001205 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: overlaps ZFA:0007117 ! Meckel's cartilage-palatoquadrate cartilage joint relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001206 @@ -12810,8 +12813,8 @@ namespace: zebrafish_anatomy synonym: "IM" EXACT [] xref: TAO:0001206 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001207 @@ -12820,9 +12823,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001207 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001208 @@ -12831,9 +12834,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 2." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001208 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001209 @@ -12842,9 +12845,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 7." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001209 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001210 @@ -12853,9 +12856,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 6." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001210 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001211 @@ -12864,9 +12867,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 5." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001211 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001212 @@ -12875,9 +12878,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 4." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001212 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001213 @@ -12886,9 +12889,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001213 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001214 @@ -12897,9 +12900,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 8." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001214 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001215 @@ -12922,7 +12925,7 @@ xref: TAO:0001216 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0005771 ! ectomesenchyme relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001217 @@ -12931,8 +12934,8 @@ namespace: zebrafish_anatomy def: "Tissue along the lateral edges of the shield that is fated to develop into the hypochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001217 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001218 @@ -12941,9 +12944,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, the part of the neural plate fated to become floor plate." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001218 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001220 @@ -12954,7 +12957,7 @@ synonym: "copulae" EXACT PLURAL [] xref: TAO:0001220 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001221 @@ -12973,8 +12976,8 @@ def: "Copula that is ventral, median, and associated with pharyngeal arches 6-7. synonym: "posterior copula" EXACT [] xref: TAO:0001222 is_a: ZFA:0001220 ! copula -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001223 @@ -12984,7 +12987,7 @@ def: "Basibranchial 1 ossifies posterior to the basihyal and anterior to the fir xref: TAO:0001223 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001224 @@ -12994,7 +12997,7 @@ def: "Basibranchial 2 ossifies in copula 1 posterior to the first hypobranchials xref: TAO:0001224 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001225 @@ -13004,7 +13007,7 @@ def: "Basibranchial 3 ossifies in copula 1 posterior to the second hypobranchial xref: TAO:0001225 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001226 @@ -13014,7 +13017,7 @@ def: "Occasionally, a fourth basibranchial ossifies in the narrow copula 2 carti xref: TAO:0001226 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001222 ! copula 2 -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001227 @@ -13150,7 +13153,7 @@ xref: TAO:0001237 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001520 ! ceratobranchial 1 cartilage relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001238 @@ -13181,7 +13184,7 @@ xref: TAO:0001240 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001519 ! ceratobranchial 4 cartilage relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001241 @@ -13192,7 +13195,7 @@ xref: TAO:0001241 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001518 ! ceratobranchial 3 cartilage relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001242 @@ -13203,7 +13206,7 @@ xref: TAO:0001242 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001517 ! ceratobranchial 2 cartilage relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001243 @@ -13214,7 +13217,7 @@ xref: TAO:0001243 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001528 ! epibranchial 1 cartilage relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001244 @@ -13235,7 +13238,7 @@ xref: TAO:0001245 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001531 ! epibranchial 4 cartilage relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001246 @@ -13246,7 +13249,7 @@ xref: TAO:0001246 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001530 ! epibranchial 2 cartilage relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001247 @@ -13258,7 +13261,7 @@ xref: TAO:0001247 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001529 ! epibranchial 3 cartilage relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001248 @@ -13278,7 +13281,7 @@ xref: TAO:0001249 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001369 ! anterior pancreatic bud relationship: part_of ZFA:0000140 ! pancreas -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001250 @@ -13290,7 +13293,7 @@ xref: TAO:0001250 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001536 ! pharyngobranchial 2 cartilage relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001251 @@ -13302,7 +13305,7 @@ synonym: "infrapharyngobranchials" EXACT [] xref: TAO:0001251 is_a: ZFA:0001533 ! pharyngobranchial cartilage relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001252 @@ -13314,7 +13317,7 @@ xref: TAO:0001252 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001534 ! pharyngobranchial 3 cartilage relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001253 @@ -13337,9 +13340,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the lateral part of the floor plate." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001256 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001257 @@ -13348,9 +13351,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the medial part of the floor plate and is located adjacent to the notochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001257 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001258 @@ -13360,10 +13363,10 @@ def: "Floor plate that is part of the rhombomeres." [GOC:mh, ORCiD:0000-0001-911 synonym: "floor plate hindbrain region" RELATED [] xref: TAO:0001258 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001259 @@ -13373,10 +13376,10 @@ synonym: "forebrain vesicle" EXACT [] synonym: "prosencephalic ventricle" EXACT [] xref: TAO:0001259 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000109 ! forebrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001260 @@ -13390,7 +13393,7 @@ xref: TAO:0001260 is_a: ZFA:0001489 ! compound organ component relationship: develops_from ZFA:0001370 ! posterior pancreatic bud relationship: part_of ZFA:0000140 ! pancreas -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001261 @@ -13399,7 +13402,7 @@ namespace: zebrafish_anatomy xref: TAO:0001261 is_a: ZFA:0001439 ! anatomical system relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001262 @@ -13410,9 +13413,9 @@ synonym: "gonadal primordium" EXACT [] synonym: "undifferentiated gonad" EXACT [] xref: TAO:0001262 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001263 @@ -13463,7 +13466,7 @@ synonym: "head vasculature" EXACT [] xref: TAO:0001267 is_a: ZFA:0005249 ! vasculature relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001268 @@ -13485,7 +13488,7 @@ def: "Fin undergoing the process of regeneration." [GOC:cvs, ORCiD:0000-0002-224 synonym: "regenerating fins" EXACT PLURAL [] xref: TAO:0001269 is_a: ZFA:0000108 ! fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001270 @@ -13533,7 +13536,7 @@ xref: TAO:0001273 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001274 @@ -13574,7 +13577,7 @@ xref: TAO:0001277 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005337 ! anterior swim bladder bud relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001278 @@ -13624,7 +13627,7 @@ xref: TAO:0001282 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001198 ! adenohypophyseal placode relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001283 @@ -13635,7 +13638,7 @@ synonym: "pupils" EXACT PLURAL [] xref: TAO:0001283 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001284 @@ -13646,9 +13649,9 @@ synonym: "choroid fissure" RELATED [] synonym: "optic fissures" EXACT PLURAL [] xref: TAO:0001284 is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001285 @@ -13661,10 +13664,10 @@ synonym: "segmental vessel" EXACT [] xref: TAO:0001285 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0000014 ! dorsal aorta -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001286 @@ -13673,8 +13676,8 @@ namespace: zebrafish_anatomy def: "Post-vent vasculature which forms an interconnecting network of venous tubes. The caudal vein plexus forms via a very active period of angiogenic sprouting, beginning at 25 hpf when venous endothelial cells of the posterior cardinal vein sprout and migrate ventrally, then fuse with neighboring tip cells. This process reiterates during a five-hour window, forming a primordial plexus by 30 hpf. By two days of development, the primitive caudal vein plexus has matured into a complex, well-perfused, venous vascular network. Starting at 4 dpf the caudal vein plexus starts to remodel and simplify." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010205-5, ZFIN:ZDB-PUB-111011-36] xref: TAO:0001286 is_a: ZFA:0005932 ! developmental vascular plexus -relationship: end ZFS:0000039 ! Larval:Days 7-13 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000039 ! larval:days 7-13 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001287 @@ -13697,7 +13700,7 @@ synonym: "renal glomeruli" EXACT PLURAL [] xref: TAO:0001288 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001289 @@ -13712,7 +13715,7 @@ synonym: "retinal proliferative zone" RELATED [] xref: TAO:0001289 is_a: ZFA:0000098 ! proliferative region relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001290 @@ -13722,10 +13725,10 @@ def: "Anterior part of the embryonic alimentary canal formed as an invagination synonym: "oral ectoderm" RELATED [ZFIN:ZDB-PUB-100726-23] xref: TAO:0001290 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000112 ! gut relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001291 @@ -13748,7 +13751,7 @@ synonym: "pineal stalk" EXACT [] xref: TAO:0001292 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001293 @@ -13759,7 +13762,7 @@ xref: TAO:0001293 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0000151 ! pronephros relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001294 @@ -13771,7 +13774,7 @@ xref: TAO:0001294 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007061 ! epibranchial field relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001295 @@ -13883,7 +13886,7 @@ synonym: "pharyngeal arches" EXACT PLURAL [] xref: TAO:0001306 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001307 @@ -13904,7 +13907,7 @@ xref: CARO:0000032 xref: TAO:0001308 is_a: ZFA:0000037 ! anatomical structure relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0001309 @@ -13915,9 +13918,9 @@ synonym: "neurogenic placodes" EXACT PLURAL [] xref: TAO:0001309 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001310 @@ -13936,10 +13939,10 @@ namespace: zebrafish_anatomy synonym: "roof plate hindbrain" RELATED [] xref: TAO:0001311 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001064 ! rhombomere relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001312 @@ -13980,9 +13983,9 @@ synonym: "AVC" EXACT [] xref: TAO:0001315 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001723 ! presumptive atrioventricular canal -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001316 @@ -13992,9 +13995,9 @@ def: "Dorsolateral placode that gives rise to the anterior lateral line." [GOC:y synonym: "anterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001316 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001317 @@ -14005,9 +14008,9 @@ comment: ZDB-PUB-080309-14 says these don't exist but looked at 55 hpf rather th synonym: "endocardial cushions" EXACT PLURAL [] xref: TAO:0001317 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001320 ! endocardium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001318 @@ -14016,9 +14019,9 @@ namespace: zebrafish_anatomy def: "The extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001318 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001319 @@ -14039,7 +14042,7 @@ xref: TAO:0001320 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001724 ! presumptive endocardium relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001321 @@ -14050,10 +14053,10 @@ synonym: "trabecula" EXACT [] synonym: "trabecular cartilage" EXACT [] xref: TAO:0001321 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001322 @@ -14063,7 +14066,7 @@ def: "A tract originating in the epiphysis and fasciculating with the tract of t synonym: "DVDT" EXACT [] xref: TAO:0001322 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown [Term] id: ZFA:0001323 @@ -14074,7 +14077,7 @@ xref: TAO:0001323 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005737 ! intestinal rod relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001324 @@ -14082,7 +14085,7 @@ name: enteric musculature namespace: zebrafish_anatomy def: "Musculature of the gut." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] synonym: "gut musculature" EXACT [] -synonym: "tunica muscularis" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] +synonym: "tunica muscularis" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0001324 is_a: ZFA:0000548 ! musculature system relationship: part_of ZFA:0000112 ! gut @@ -14114,7 +14117,7 @@ namespace: zebrafish_anatomy def: "Trunk musculature that is located in ventral wall of abdomen." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001327 is_a: ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001328 @@ -14126,7 +14129,7 @@ synonym: "neuromeres" EXACT PLURAL [] xref: TAO:0001328 is_a: ZFA:0001308 ! organism subdivision relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001329 @@ -14137,7 +14140,7 @@ synonym: "inner plexiform layer" EXACT [] xref: TAO:0001329 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001330 @@ -14148,7 +14151,7 @@ synonym: "retinal outer plexiform layers" EXACT PLURAL [] xref: TAO:0001330 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001331 @@ -14160,7 +14163,7 @@ synonym: "outer limiting membranes" EXACT PLURAL [] xref: TAO:0001331 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001332 @@ -14187,7 +14190,7 @@ def: "Presumptive structure fated to become enteric nervous system. Develops fr xref: TAO:0001334 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0000818 ! vagal neural crest -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001335 @@ -14218,7 +14221,7 @@ xref: TAO:0001338 is_a: ZFA:0001490 ! cavitated compound organ relationship: part_of ZFA:0000112 ! gut relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001339 @@ -14237,7 +14240,7 @@ def: "The nucleus containing the cell bodies of neurons whose axons form the pos synonym: "ntPOC" EXACT [] xref: TAO:0001340 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001341 @@ -14248,9 +14251,9 @@ synonym: "IZ" EXACT [] xref: TAO:0001341 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0001342 ! presumptive intervening zone -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001342 @@ -14259,9 +14262,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the intervening zone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001342 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001343 @@ -14271,7 +14274,7 @@ def: "Boundary between the telencephalon and diencephalon." [GOC:mh, ORCiD:0000- xref: TAO:0001343 is_a: ZFA:0001689 ! anatomical line relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001344 @@ -14282,7 +14285,7 @@ synonym: "zli" EXACT [] xref: TAO:0001344 is_a: ZFA:0001689 ! anatomical line relationship: part_of ZFA:0001215 ! thalamus -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001345 @@ -14293,7 +14296,7 @@ xref: TAO:0001345 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001346 ! interrenal primordium relationship: part_of ZFA:0000669 ! head kidney -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001346 @@ -14303,9 +14306,9 @@ def: "Multi-tissue structure located in the kidney that develops into the interr xref: TAO:0001346 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001206 ! intermediate mesoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001347 @@ -14317,7 +14320,7 @@ synonym: "strata fibrosum et griseum superficiales" EXACT PLURAL [] xref: TAO:0001347 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001348 @@ -14329,7 +14332,7 @@ synonym: "stratum fibrosum marginale" EXACT [ZFIN:ZDB-PUB-180207-5] xref: TAO:0001348 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001349 @@ -14340,7 +14343,7 @@ synonym: "strata opticum" EXACT PLURAL [] xref: TAO:0001349 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001350 @@ -14349,7 +14352,7 @@ namespace: zebrafish_anatomy xref: TAO:0001350 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001351 @@ -14360,7 +14363,7 @@ synonym: "strata album centrales" EXACT PLURAL [] xref: TAO:0001351 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001355 @@ -14382,7 +14385,7 @@ def: "The terminal nerve, located anterior to cranial nerve I, is comprised of a synonym: "nervus terminalis" EXACT [] xref: TAO:0001356 is_a: ZFA:0000641 ! cranial nerve -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001357 @@ -14391,9 +14394,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is ventrolateral to the roof plate and part of the midbrain." [ISBN:0444517383, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001357 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001358 @@ -14402,10 +14405,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the diencephalic region." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001358 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001359 @@ -14414,7 +14417,7 @@ namespace: zebrafish_anatomy xref: TAO:0001359 is_a: ZFA:0001512 ! anatomical group relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001360 @@ -14424,7 +14427,7 @@ def: "An unpaired left-sided accessory organ which plays a role in establishing xref: TAO:0001360 is_a: ZFA:0000496 ! compound organ relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001361 @@ -14458,7 +14461,7 @@ synonym: "Weberian supraneural" EXACT [] xref: TAO:0001363 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001364 @@ -14489,7 +14492,7 @@ synonym: "TPOC" EXACT [] xref: TAO:0001366 is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000059 ! postoptic commissure -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001367 @@ -14501,7 +14504,7 @@ xref: TAO:0001367 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007040 ! forebrain midbrain boundary neural tube relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001368 @@ -14510,10 +14513,10 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the forebrain midbrain boundary." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001368 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001369 @@ -14527,7 +14530,7 @@ synonym: "ventral pancreatic anlage" EXACT [] xref: TAO:0001369 is_a: ZFA:0001390 ! pancreatic bud relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0001370 @@ -14540,7 +14543,7 @@ synonym: "dorsal pancreatic anlage" EXACT [] synonym: "dorsal posterior bud" RELATED [ZFIN:ZDB-PUB-030902-16] xref: TAO:0001370 is_a: ZFA:0001390 ! pancreatic bud -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001371 @@ -14551,7 +14554,7 @@ xref: TAO:0001371 is_a: ZFA:0001439 ! anatomical system relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001372 @@ -14562,7 +14565,7 @@ xref: TAO:0001372 is_a: ZFA:0005162 ! digestive system duct relationship: develops_from ZFA:0001369 ! anterior pancreatic bud relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0001373 @@ -14574,9 +14577,9 @@ synonym: "migratory slow muscle precursor cells" EXACT PLURAL [] xref: TAO:0001373 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000003 ! adaxial cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001374 @@ -14587,7 +14590,7 @@ xref: TAO:0001374 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001375 @@ -14610,7 +14613,7 @@ def: "Presumptive structure at the animal poll of the blastula that will develop synonym: "presumptive epidermis" EXACT [] xref: TAO:0001376 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0001377 @@ -14619,7 +14622,7 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become mesoderm. Determined by fate mapping." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001377 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0001378 @@ -14629,9 +14632,9 @@ def: "Region of the hypoblast that is located along the rostral-caudal axis of t xref: TAO:0001378 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000071 ! shield -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000117 ! hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001379 @@ -14639,9 +14642,9 @@ name: pharyngeal ectoderm namespace: zebrafish_anatomy xref: TAO:0001379 is_a: ZFA:0000016 ! ectoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001381 @@ -14672,8 +14675,8 @@ def: "Surface structure that develops into a paired fin." [GOC:mh, ORCiD:0000-00 synonym: "fin buds" EXACT PLURAL [] xref: TAO:0001383 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000042 ! juvenile:days 30-44 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001384 @@ -14684,7 +14687,7 @@ synonym: "pelvic fin buds" EXACT PLURAL [] xref: TAO:0001384 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001454 ! pelvic fin field -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001385 @@ -14695,7 +14698,7 @@ synonym: "apical ectodermal ridge pelvic fin buds" EXACT PLURAL [] xref: TAO:0001385 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: part_of ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001386 @@ -14705,9 +14708,9 @@ def: "Mesoderm part of pelvic fin bud." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "mesoderm pelvic fin buds" EXACT PLURAL [] xref: TAO:0001386 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001387 @@ -14726,7 +14729,7 @@ synonym: "epithelial mesenchymal boundarys" EXACT PLURAL [] xref: TAO:0001388 is_a: ZFA:0001689 ! anatomical line relationship: part_of ZFA:0001269 ! regenerating fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001389 @@ -14749,9 +14752,9 @@ synonym: "pancreatic buds" EXACT PLURAL [] xref: TAO:0001390 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000254 ! pancreas primordium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001391 @@ -14819,7 +14822,7 @@ def: "Posterior to the Weberian apparatus, otophysan supraneurals form as median synonym: "post-Weberian supraneurals" EXACT PLURAL [] xref: TAO:0001397 is_a: ZFA:0000442 ! supraneural -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001399 @@ -14833,7 +14836,7 @@ xref: TAO:0001399 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: overlaps ZFA:0007117 ! Meckel's cartilage-palatoquadrate cartilage joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001400 @@ -14844,7 +14847,7 @@ xref: TAO:0001400 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: overlaps ZFA:0005885 ! operculohyoid ligament relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001401 @@ -14875,7 +14878,7 @@ xref: TAO:0001403 is_a: ZFA:0001590 ! dermal bone relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001404 @@ -14889,7 +14892,7 @@ is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001405 ! ethmoid cartilage relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001405 @@ -14899,10 +14902,10 @@ def: "Bilaterally paired neurocranium cartilage which is initially plate-like an synonym: "ethmoid plate" EXACT [] xref: TAO:0001405 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000042 ! juvenile:days 30-44 relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001406 @@ -14915,7 +14918,7 @@ relationship: develops_from ZFA:0000585 ! kinethmoid cartilage relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001407 @@ -14925,7 +14928,7 @@ def: "Plate like dermal bone, variable in size, though usually one of the smalle xref: TAO:0001407 is_a: ZFA:0000376 ! infraorbital relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001408 @@ -14935,7 +14938,7 @@ def: "Plate like dermal bone, variable in size, but usually largest in the serie xref: TAO:0001408 is_a: ZFA:0000376 ! infraorbital relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001409 @@ -14945,7 +14948,7 @@ def: "Plate like dermal bone. Usually fused with infraorbital 3." [GOC:mh, ORCiD xref: TAO:0001409 is_a: ZFA:0000376 ! infraorbital relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001410 @@ -14984,7 +14987,7 @@ relationship: overlaps ZFA:0005891 ! epiotic-parietal joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001414 @@ -15046,7 +15049,7 @@ synonym: "dorsal fin support" EXACT [] xref: TAO:0001419 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0001124 ! dorsal fin skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001420 @@ -15078,7 +15081,7 @@ synonym: "hyomandibular cartilage" EXACT [] xref: TAO:0001422 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001423 @@ -15088,11 +15091,11 @@ def: "Rod-shaped paired cartilages on either side of the notochord. They unite, synonym: "parachordal cartilages" EXACT PLURAL [] xref: TAO:0001423 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001424 @@ -15105,7 +15108,7 @@ synonym: "neurocranium" RELATED [] xref: TAO:0001424 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001425 @@ -15125,7 +15128,7 @@ synonym: "excurrent nostril" EXACT [ZFIN:ZDB-PUB-961014-399] synonym: "posterior nares" EXACT PLURAL [] xref: TAO:0001426 is_a: ZFA:0000550 ! naris -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001427 @@ -15136,7 +15139,7 @@ synonym: "anterior nares" EXACT PLURAL [] synonym: "incurrent nostril" EXACT [ZFIN:ZDB-PUB-961014-399] xref: TAO:0001427 is_a: ZFA:0000550 ! naris -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001428 @@ -15148,7 +15151,7 @@ synonym: "olfactory rosettes" EXACT PLURAL [] xref: TAO:0001428 is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001429 @@ -15168,7 +15171,7 @@ def: "A duct connecting the esophagus to the posterior chamber of the swim bladd xref: TAO:0001430 is_a: ZFA:0005171 ! duct relationship: continuous_with ZFA:0000204 ! esophagus -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001431 @@ -15176,9 +15179,9 @@ name: primitive olfactory epithelium namespace: zebrafish_anatomy xref: TAO:0001431 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000048 ! olfactory placode -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001432 @@ -15206,10 +15209,10 @@ def: "Floor plate that is part of the neural tube." [GOC:mh, GOC:ymb, ORCiD:0000 xref: TAO:0001434 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000887 ! floor plate neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001435 @@ -15218,9 +15221,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue on the side of the lumen of the neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001435 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001436 @@ -15229,10 +15232,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001436 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001437 @@ -15271,9 +15274,9 @@ namespace: zebrafish_anatomy def: "The interface between the dorsal neuroepithelium and the roof plate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001440 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001441 @@ -15282,7 +15285,7 @@ namespace: zebrafish_anatomy def: "Posterior portion of the rhombic lip contained within rhombomeres 2-8. Gives rise to several brainstem nuclei and choroid plexus." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001441 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0000822 ! rhombomere 2 @@ -15291,7 +15294,7 @@ relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001440 ! rhombic lip -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001442 @@ -15300,10 +15303,10 @@ namespace: zebrafish_anatomy def: "Anterior-most region of dorsal hindbrain within rhombomere 1, adjacent the midbrain-hindbrain boundary." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001442 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001440 ! rhombic lip -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001443 @@ -15360,7 +15363,7 @@ synonym: "ultimobranchial bodies" EXACT PLURAL [] xref: TAO:0001448 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001449 @@ -15372,7 +15375,7 @@ xref: TAO:0001449 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0001386 ! mesoderm pelvic fin bud relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001450 @@ -15384,7 +15387,7 @@ xref: TAO:0001450 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: develops_from ZFA:0001385 ! apical ectodermal ridge pelvic fin bud relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001451 @@ -15394,9 +15397,9 @@ def: "A small group of mesodermal cells located at the posterior margin of the d synonym: "ZPA" RELATED [] xref: TAO:0001451 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000789 ! mesoderm pectoral fin bud -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001452 @@ -15406,9 +15409,9 @@ def: "A small group of mesodermal cells located at the posterior margin of the d synonym: "ZPA" RELATED [] xref: TAO:0001452 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001386 ! mesoderm pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001453 @@ -15418,9 +15421,9 @@ def: "Embryonic region that develops into the pectoral fin bud." [GOC:mh, ORCiD: synonym: "pectoral fin fields" EXACT PLURAL [] xref: TAO:0001453 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001454 @@ -15430,9 +15433,9 @@ def: "Portion of tissue in the pelvic region that develops into the pelvic fin b synonym: "pelvic fin fields" EXACT PLURAL [] xref: TAO:0001454 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001455 @@ -15443,7 +15446,7 @@ synonym: "coraco-scapular cartilage" EXACT [] synonym: "scapulo-coracoid cartilage" EXACT [] xref: TAO:0001455 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0000407 ! pectoral girdle [Term] @@ -15454,8 +15457,8 @@ def: "A plate-like chondrogenic condensation within the pectoral fin, which subd synonym: "fin plate cartilage" EXACT [] xref: TAO:0001456 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001457 @@ -15516,9 +15519,9 @@ synonym: "somite border cell" EXACT PLURAL [] synonym: "somite boundary" RELATED [] xref: TAO:0001462 is_a: ZFA:0005594 ! anatomical surface -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001463 @@ -15529,7 +15532,7 @@ synonym: "melanophore stripes" EXACT PLURAL [] xref: TAO:0001463 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001464 @@ -15540,7 +15543,7 @@ synonym: "retinal outer nuclear layers" EXACT PLURAL [] xref: TAO:0001464 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001465 @@ -15551,7 +15554,7 @@ synonym: "photoreceptor inner segment layers" EXACT PLURAL [] xref: TAO:0001465 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000143 ! retinal photoreceptor layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001466 @@ -15562,7 +15565,7 @@ synonym: "photoreceptor outer segment layers" EXACT PLURAL [] xref: TAO:0001466 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000143 ! retinal photoreceptor layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001467 @@ -15570,9 +15573,9 @@ name: pharyngeal mesoderm namespace: zebrafish_anatomy xref: TAO:0001467 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001468 @@ -15591,7 +15594,7 @@ synonym: "lateral lines" EXACT PLURAL [] xref: TAO:0001469 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001470 @@ -15621,7 +15624,7 @@ synonym: "neuromast anterior" EXACT [] xref: TAO:0001472 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001473 @@ -15632,7 +15635,7 @@ subset: cell_slim synonym: "deep blastomeres" EXACT PLURAL [] xref: TAO:0001473 is_a: ZFA:0000093 ! blastomere -relationship: start ZFS:0000007 ! Cleavage:64-cell +relationship: start ZFS:0000007 ! cleavage:64-cell [Term] id: ZFA:0001474 @@ -15660,7 +15663,7 @@ def: "Anatomical structure, that consists of similar cells and intercellular mat xref: CARO:0000043 xref: TAO:0001477 is_a: ZFA:0000037 ! anatomical structure -relationship: start ZFS:0000012 ! Blastula:High +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001478 @@ -15670,7 +15673,7 @@ def: "Anatomical group that has its parts adjacent to one another." [GOC:mh, ORC xref: CARO:0000041 xref: TAO:0001478 is_a: ZFA:0001512 ! anatomical group -relationship: start ZFS:0000012 ! Blastula:High +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001479 @@ -15724,7 +15727,7 @@ synonym: "middle lateral line ganglia" EXACT PLURAL [] xref: TAO:0001483 is_a: ZFA:0000120 ! lateral line ganglion relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001484 @@ -15735,7 +15738,7 @@ subset: cell_slim synonym: "superficial blastomeres" EXACT PLURAL [] xref: TAO:0001484 is_a: ZFA:0000093 ! blastomere -relationship: start ZFS:0000007 ! Cleavage:64-cell +relationship: start ZFS:0000007 ! cleavage:64-cell [Term] id: ZFA:0001485 @@ -15746,7 +15749,7 @@ synonym: "basal laminae" EXACT PLURAL [] xref: CARO:0000065 xref: TAO:0001485 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001486 @@ -15756,7 +15759,7 @@ def: "Portion of tissue, that consists of one or more layers of epithelial cells xref: CARO:0000066 xref: TAO:0001486 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001487 @@ -15766,9 +15769,9 @@ def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; xref: CARO:0000004 xref: TAO:0001487 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001488 @@ -15779,7 +15782,7 @@ synonym: "multi-tissue structures" EXACT PLURAL [] xref: CARO:0000055 xref: TAO:0001488 is_a: ZFA:0000037 ! anatomical structure -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001489 @@ -15927,7 +15930,7 @@ def: "Cranial cartilage which is bilaterally paired and develops as a dorsal pla synonym: "laminas orbitonasalis" EXACT PLURAL [] xref: TAO:0001503 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001580 ! neurocranium [Term] @@ -15938,7 +15941,7 @@ def: "Cranial cartilage which is a paired anterodorsal projection of the posteri synonym: "occipital arch cartilages" EXACT PLURAL [] xref: TAO:0001504 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001580 ! neurocranium [Term] @@ -15971,7 +15974,7 @@ synonym: "trabeculae cranii" EXACT PLURAL [] xref: TAO:0001507 is_a: ZFA:0001461 ! chondrocranium cartilage relationship: part_of ZFA:0001321 ! neurocranial trabecula -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001508 @@ -15992,7 +15995,7 @@ synonym: "scleral cartilage" RELATED [] synonym: "sclerotic cartilages" EXACT PLURAL [] xref: TAO:0001509 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001510 @@ -16015,7 +16018,7 @@ synonym: "stylohyal" EXACT [] xref: TAO:0001511 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001512 @@ -16026,7 +16029,7 @@ def: "Anatomical structure consisting of at least two non-overlapping organs, mu xref: CARO:0000054 xref: TAO:0001512 is_a: ZFA:0000037 ! anatomical structure -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001513 @@ -16037,7 +16040,7 @@ synonym: "dermomyotomes" EXACT PLURAL [] xref: TAO:0001513 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000155 ! somite -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001514 @@ -16070,7 +16073,7 @@ synonym: "ceratobranchial cartilages" EXACT PLURAL [] xref: TAO:0001516 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001517 @@ -16079,9 +16082,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001517 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001518 @@ -16090,9 +16093,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001518 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001519 @@ -16101,9 +16104,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001519 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001520 @@ -16112,7 +16115,7 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that forms between hypobranchial 1 and epibranchial 1." [TAO:curator] xref: TAO:0001520 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton [Term] @@ -16133,7 +16136,7 @@ synonym: "hypobranchial cartilages" EXACT PLURAL [] xref: TAO:0001522 is_a: ZFA:0001460 ! pharyngeal arch cartilage relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001523 @@ -16192,7 +16195,7 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone and the medial end of pharyngobranchial 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001528 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton [Term] @@ -16202,7 +16205,7 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone and the medial end of pharyngobranchial 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001529 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton [Term] @@ -16212,7 +16215,7 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone and the medial end of pharyngobranchial 2." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001530 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton [Term] @@ -16222,7 +16225,7 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone and the medial end of pharyngobranchial 4." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001531 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton [Term] @@ -16249,7 +16252,7 @@ def: "Paired elongate cartilages that lie posteromedial to epibranchial 2 and me synonym: "pharyngobranchial 3 cartilages" EXACT PLURAL [] xref: TAO:0001534 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton [Term] @@ -16268,7 +16271,7 @@ def: "Paired disc-like cartilage lying medial to and between the medial tips of synonym: "pharyngobranchial 2 cartilages" EXACT PLURAL [] xref: TAO:0001536 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton [Term] @@ -16279,7 +16282,7 @@ def: "Cartilage that develops initially on the medial side of the coraco-scapula synonym: "mesocorocoid cartilages" EXACT PLURAL [] xref: TAO:0001537 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001538 @@ -16440,7 +16443,7 @@ synonym: "epibranchial ganglia" EXACT PLURAL [] xref: TAO:0001555 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0001294 ! epibranchial placode -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001556 @@ -16451,7 +16454,7 @@ synonym: "paravertebral ganglion" EXACT [] xref: TAO:0001556 is_a: ZFA:0001573 ! trunk ganglion relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001557 @@ -16463,9 +16466,9 @@ synonym: "pronephric glomeruli" EXACT PLURAL [] synonym: "pronephric glomus " EXACT [] xref: TAO:0001557 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001558 @@ -16475,9 +16478,9 @@ def: "Bilaterally paired tubes connecting the pronephric glomeruli to the pronep synonym: "ciliated neck segment" EXACT [] xref: TAO:0001558 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001559 @@ -16502,7 +16505,7 @@ namespace: zebrafish_anatomy def: "Hypural of the caudal fin dorsal to hypural 1. Supports the lower lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001561 is_a: ZFA:0000364 ! hypural -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0001562 @@ -16511,7 +16514,7 @@ namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 2 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001562 is_a: ZFA:0000364 ! hypural -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001563 @@ -16520,7 +16523,7 @@ namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 3 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001563 is_a: ZFA:0000364 ! hypural -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001564 @@ -16529,7 +16532,7 @@ namespace: zebrafish_anatomy def: "Dorsal-most hypural, that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001564 is_a: ZFA:0000364 ! hypural -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001565 @@ -16545,7 +16548,7 @@ synonym: "Stage 2 oocyte" EXACT [] xref: TAO:0001565 is_a: ZFA:0001109 ! oocyte relationship: part_of ZFA:0001265 ! ovarian follicle stage II -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001566 @@ -16561,7 +16564,7 @@ synonym: "vitellogenic oocytes" EXACT [] xref: TAO:0001566 is_a: ZFA:0001109 ! oocyte relationship: part_of ZFA:0001266 ! ovarian follicle stage III -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001567 @@ -16577,7 +16580,7 @@ synonym: "Stage 1 oocyte" EXACT [] xref: TAO:0001567 is_a: ZFA:0001109 ! oocyte relationship: part_of ZFA:0001263 ! ovarian follicle stage I -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001568 @@ -16593,7 +16596,7 @@ synonym: "Stage 4 oocyte" EXACT [] xref: TAO:0001568 is_a: ZFA:0001109 ! oocyte relationship: part_of ZFA:0001264 ! ovarian follicle stage IV -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001569 @@ -16606,7 +16609,7 @@ synonym: "mature egg" EXACT [] synonym: "unactivated egg" EXACT [] xref: TAO:0001569 is_a: ZFA:0001109 ! oocyte -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001570 @@ -16621,8 +16624,8 @@ xref: CL:0000025 xref: TAO:0001570 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001569 ! oocyte stage V -relationship: end ZFS:0000001 ! Zygote:1-cell -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000001 ! zygote:1-cell +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001571 @@ -16643,7 +16646,7 @@ synonym: "superior sympathetic cervical ganglion" EXACT [] xref: TAO:0001572 is_a: ZFA:0001573 ! trunk ganglion relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001573 @@ -16653,7 +16656,7 @@ def: "Ganglion which is located in the trunk." [GOC:mh, ORCiD:0000-0001-9114-873 synonym: "trunk ganglia" EXACT PLURAL [] xref: TAO:0001573 is_a: ZFA:0000190 ! ganglion -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001574 @@ -16834,7 +16837,7 @@ is_a: ZFA:0000461 ! Weberian ossicle is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: develops_from ZFA:0000637 ! claustrum cartilage -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001593 @@ -16845,7 +16848,7 @@ synonym: "quadrate ventral processes" EXACT PLURAL [] xref: TAO:0000224 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000621 ! quadrate -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001594 @@ -16895,7 +16898,7 @@ xref: TAO:0000348 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000661 ! exoccipital relationship: part_of ZFA:0001627 ! lagenar capsule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001598 @@ -16914,7 +16917,7 @@ namespace: zebrafish_anatomy xref: TAO:0002214 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0001171 ! os suspensorium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001600 @@ -16936,7 +16939,7 @@ synonym: "manubrium incudus" EXACT [] xref: TAO:0001553 is_a: ZFA:0001636 ! membrane bone relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001602 @@ -16946,7 +16949,7 @@ def: "Bony process that develops as a dorsally projecting cartilaginous extensi xref: TAO:0001548 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001603 @@ -16957,7 +16960,7 @@ synonym: "articular process" RELATED [] xref: TAO:0001549 is_a: ZFA:0001591 ! endochondral bone relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001604 @@ -16968,7 +16971,7 @@ synonym: "caudal fin dorsal lobe" EXACT [] xref: TAO:0001593 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001605 @@ -16979,7 +16982,7 @@ synonym: "caudal fin ventral lobe" EXACT [] xref: TAO:0001594 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001606 @@ -17110,7 +17113,7 @@ xref: TAO:0001621 is_a: ZFA:0001487 ! portion of organism substance relationship: part_of ZFA:0000051 ! otic vesicle relationship: part_of ZFA:0000559 ! otolith organ -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001618 @@ -17128,7 +17131,7 @@ synonym: "optic fiber layers" EXACT PLURAL [] xref: TAO:0002212 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001620 @@ -17138,7 +17141,7 @@ def: "Most anterior portion of the pronephric duct (or tubule as described by Wi synonym: "PCT" EXACT [] xref: TAO:0002238 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct [Term] @@ -17149,7 +17152,7 @@ def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2 synonym: "proximal straight tubules" EXACT PLURAL [] xref: TAO:0002239 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct [Term] @@ -17160,7 +17163,7 @@ def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2 synonym: "pronephric distal early tubules" EXACT PLURAL [] xref: TAO:0002236 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct [Term] @@ -17171,7 +17174,7 @@ def: "Most posterior portion of the pronephric duct (or tubule as described by W synonym: "posterior pronephric ducts" EXACT PLURAL [] xref: TAO:0002225 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct [Term] @@ -17181,7 +17184,7 @@ namespace: zebrafish_anatomy def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the distal early tubule." [ZFIN:ZDB-PUB-071029-9] synonym: "distal late tubules" EXACT PLURAL [] is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct [Term] @@ -17258,7 +17261,7 @@ def: "Portion of tissue that consists of mesodermally derived cells and intercel xref: TAO:0001641 xref: VSAO:0000017 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001633 @@ -17336,9 +17339,9 @@ def: "Ventral bend in the brain occurring caudal to the adenohypophyseal placode synonym: "ventral flexure" EXACT [] xref: TAO:0002181 is_a: ZFA:0005593 ! neuraxis flexure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001641 @@ -17368,8 +17371,8 @@ synonym: "anatomical spaces" EXACT PLURAL [] xref: CARO:0000005 xref: TAO:0001668 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001644 @@ -17416,8 +17419,8 @@ namespace: zebrafish_anatomy def: "Neural crest that migrates into the pharyngeal arches and heart, forming connective tissue that separates the vessels of the heart." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0002173 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001649 @@ -17427,7 +17430,7 @@ def: "Anatomical cluster that is the series of dermal bones associated with the synonym: "circumorbital series" EXACT [] xref: TAO:0001709 is_a: ZFA:0001478 ! anatomical cluster -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001650 @@ -17436,7 +17439,7 @@ namespace: zebrafish_anatomy synonym: "gill mesenchyme" EXACT [] xref: TAO:0002172 is_a: ZFA:0000113 ! head mesenchyme -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001651 @@ -17451,7 +17454,7 @@ xref: TAO:0000283 xref: TAO:0002200 is_a: ZFA:0000236 ! mandibular muscle relationship: has_developmental_contribution_from ZFA:0005923 ! anterior migratory muscle precursor stream -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001652 @@ -17481,7 +17484,7 @@ def: "Anatomical space which is located beneath the operculum and external to th xref: TAO:0002154 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001655 @@ -17493,7 +17496,7 @@ xref: TAO:0002220 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0001438 ! coelom relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001656 @@ -17507,7 +17510,7 @@ xref: TAO:0002224 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0001438 ! coelom relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001657 @@ -17563,7 +17566,7 @@ def: "The portion of tissue that is the initial segment of one of the cranial ne xref: TAO:0002190 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000641 ! cranial nerve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001665 @@ -17619,7 +17622,7 @@ xref: TAO:0001821 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000135 ! notochord relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001671 @@ -17628,9 +17631,9 @@ namespace: zebrafish_anatomy def: "Epithelium that is the primary epithelium of the developing inner ear and has anterior and posterior maculae as its parts. These maculae later move apart into distinct regions of epithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-383] xref: TAO:0002206 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001672 @@ -17642,7 +17645,7 @@ xref: TAO:0002193 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000262 ! posterior semicircular canal relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001673 @@ -17652,7 +17655,7 @@ def: "Podocyte that is part of the pronephros." [GOC:cvs, ORCiD:0000-0002-2244-7 subset: cell_slim xref: TAO:0002237 is_a: ZFA:0009285 ! podocyte -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus [Term] @@ -17664,7 +17667,7 @@ subset: cell_slim xref: TAO:0002208 is_a: ZFA:0009285 ! podocyte relationship: part_of ZFA:0001288 ! renal glomerulus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001675 @@ -17690,9 +17693,9 @@ namespace: zebrafish_anatomy def: "Floor plate that is part of the midbrain." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002196 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001678 @@ -17702,8 +17705,8 @@ def: "Multi-tissue structure that consists of the structures that develop into t comment: Dbxref for ZFIN changed to match actual database accession number. Old Dbxref ZDB-ANAT-090226-1 correct Dbxref ZDB-ANAT-090227-5. xref: TAO:0002201 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001679 @@ -17718,9 +17721,9 @@ synonym: "presumptive lens" RELATED [] xref: TAO:0002205 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000122 ! lens placode -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001680 @@ -17759,7 +17762,7 @@ xref: TAO:0002142 xref: TAO:0002143 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Melissa Haendel creation_date: 2009-03-23T01:50:38Z @@ -17771,7 +17774,7 @@ def: "Portion of tissue comprised of four to six layers of nonkeratinized, strat xref: TAO:0002187 is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:11:11Z @@ -17785,7 +17788,7 @@ synonym: "anterior limiting membrane" RELATED [] xref: TAO:0002155 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Melissa Haendel creation_date: 2009-03-23T02:11:47Z @@ -17797,7 +17800,7 @@ def: "Portion of tissue that is located basal to Bowman's layer and distal to De xref: TAO:0002189 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:16Z @@ -17810,7 +17813,7 @@ synonym: "posterior limiting membrane" EXACT [] xref: TAO:0002157 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:32Z @@ -17822,7 +17825,7 @@ def: "Epithelium that is the innermost layer of the cornea and is comprised of a xref: TAO:0002186 is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:13:25Z @@ -17833,9 +17836,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002188 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-03-23T04:36:20Z @@ -17847,8 +17850,8 @@ def: "Non-material anatomical entity of one dimension, which forms a boundary of xref: CARO:0000008 xref: TAO:0001837 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell created_by: Melissa Haendel creation_date: 2009-04-30T02:46:34Z @@ -17884,7 +17887,7 @@ def: "CNS white matter that crosses the midline within the hindbrain." [GOC:mh, xref: TAO:0002199 is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-06-18T12:33:21Z @@ -17929,7 +17932,7 @@ def: "Motor nucleus of vagal nerve that is located within the medial portion of synonym: "mmX" EXACT [] xref: TAO:0002207 is_a: ZFA:0000387 ! motor nucleus of vagal nerve -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Melissa Haendel creation_date: 2009-08-04T10:45:00Z @@ -18004,8 +18007,8 @@ namespace: zebrafish_anatomy def: "Proliferative region that is part of the developing fin fold or fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002146 is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-08-05T02:38:05Z @@ -18016,9 +18019,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is a thickening and reshaping of the epidermal basal stratum cells beneath which fibroblasts accumulate to form the scale primordium." [ZFIN:ZDB-PUB-081008-12] xref: TAO:0002195 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001180 ! epidermal basal stratum -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:22:18Z @@ -18031,9 +18034,9 @@ synonym: "scale placode" RELATED [] synonym: "scale primordia " EXACT PLURAL [] xref: TAO:0002242 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:35:05Z @@ -18056,7 +18059,7 @@ def: "Portion of tissue that is part of the corpus cerebelli and contains Purkin xref: TAO:0002240 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-11T09:41:06Z @@ -18091,7 +18094,7 @@ def: "Portion of tissue that is part of the valvula cerebelli and contains Purki xref: TAO:0002241 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:00:08Z @@ -18105,7 +18108,7 @@ xref: TAO:0002210 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:02:35Z @@ -18119,7 +18122,7 @@ xref: TAO:0002185 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:18:48Z @@ -18131,9 +18134,9 @@ def: "Portion of tissue that is part of the heart tube and will become the bulbu xref: TAO:0002230 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000818 ! vagal neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:25:06Z @@ -18147,7 +18150,7 @@ xref: TAO:0002218 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000394 ! molecular layer corpus cerebelli relationship: part_of ZFA:0000913 ! molecular layer valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T04:32:51Z @@ -18158,7 +18161,7 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become ventral mesoderm. Determined by fate mapping." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002235 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield created_by: Melissa Haendel creation_date: 2009-08-24T11:02:45Z @@ -18169,9 +18172,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue within the otic vesicle that consists of a thin layer of otic epithelium covering a finger-shaped core of acellular matrix." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-090330-11] xref: TAO:0002215 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000051 ! otic vesicle -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Melissa Haendel creation_date: 2009-08-25T10:45:23Z @@ -18182,7 +18185,7 @@ namespace: zebrafish_anatomy def: "Otic vesicle protrusion that is initially ventrally located and then fuses with the lateral protrusion, giving rise to the pillar of the lateral semicircular canal." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-090330-11] xref: TAO:0002216 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-08-25T10:53:24Z @@ -18194,7 +18197,7 @@ def: "Portion of tissue around which the semicircular canals flow." [GOC:ymb, OR xref: TAO:0002223 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000431 ! semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Melissa Haendel creation_date: 2009-08-25T10:57:52Z @@ -18206,9 +18209,9 @@ def: "Multi-tissue structure that is part of the heart tube and will become the xref: TAO:0002228 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001721 ! presumptive atrium primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:20:59Z @@ -18221,9 +18224,9 @@ xref: TAO:0002231 xref: ZFA:0002231 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001720 ! presumptive cardiac ventricle primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:21:18Z @@ -18234,9 +18237,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac ventricle." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002232 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:23Z @@ -18247,9 +18250,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac atrium." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002229 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:28Z @@ -18260,9 +18263,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the sinus venosus." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002234 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:40:57Z @@ -18273,9 +18276,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the atrioventricular canal." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002227 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Melissa Haendel creation_date: 2009-08-31T11:57:36Z @@ -18286,9 +18289,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the endocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002233 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T01:21:44Z @@ -18302,9 +18305,9 @@ subset: cell_slim xref: CL:0002377 xref: TAO:0002203 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Melissa Haendel creation_date: 2009-09-08T02:10:35Z @@ -18316,9 +18319,9 @@ def: "Artery that extends horizontally across the brain midline which is fed by synonym: "BCA" EXACT [] xref: TAO:0005000 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005001 @@ -18331,7 +18334,7 @@ synonym: "PCS" EXACT [] synonym: "posterior communicating segment of the basilar artery" EXACT [] xref: TAO:0005001 is_a: ZFA:0000005 ! artery -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005002 @@ -18342,7 +18345,7 @@ synonym: "BA" EXACT [] xref: TAO:0005002 is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005003 @@ -18366,7 +18369,7 @@ synonym: "branchial aortic arches " EXACT PLURAL [ZFIN:ZDB-PUB-080512-6] xref: TAO:0005004 is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005005 @@ -18377,7 +18380,7 @@ synonym: "AA1" EXACT [] synonym: "mandibular aortic arch" EXACT [] xref: TAO:0005005 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001612 ! pharyngeal arch 1 [Term] @@ -18389,7 +18392,7 @@ synonym: "AA2" EXACT [] synonym: "hyoid aortic arch" EXACT [] xref: TAO:0005006 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001611 ! pharyngeal arch 2 [Term] @@ -18401,7 +18404,7 @@ synonym: "AA3" EXACT [] xref: TAO:0005007 is_a: ZFA:0005004 ! aortic arch relationship: part_of ZFA:0001606 ! pharyngeal arch 3 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005008 @@ -18412,7 +18415,7 @@ synonym: "AA4" EXACT [] xref: TAO:0005008 is_a: ZFA:0005004 ! aortic arch relationship: part_of ZFA:0001607 ! pharyngeal arch 4 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005009 @@ -18423,7 +18426,7 @@ synonym: "AA5" EXACT [] xref: TAO:0005009 is_a: ZFA:0005004 ! aortic arch relationship: part_of ZFA:0001608 ! pharyngeal arch 5 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005010 @@ -18436,9 +18439,9 @@ synonym: "mid-cerebral vein" EXACT [] synonym: "middle cerebral vein" EXACT [] xref: TAO:0005010 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005011 @@ -18449,8 +18452,8 @@ synonym: "pseudobranchial arteries" EXACT PLURAL [] xref: TAO:0005011 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005012 @@ -18505,9 +18508,9 @@ def: "Aortic arch that is part of pharyngeal arch 6. Aortic arch 6 artery is pai synonym: "AA6" EXACT [] xref: TAO:0005016 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001609 ! pharyngeal arch 6 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005017 @@ -18517,9 +18520,9 @@ def: "The vessel between the anterior cerebral vein and the mid cerebral vein." synonym: "PMBC" EXACT [] xref: TAO:0005017 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005018 @@ -18552,9 +18555,9 @@ def: "Artery that irrigates the forebrain and midbrain." [ZFIN:ZDB-PUB-010205-5] synonym: "CtA" EXACT [] xref: TAO:0005020 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005021 @@ -18564,7 +18567,7 @@ def: "Extend upward from the PCS, branch to provide an arterial feed to the hind synonym: "CCtA" EXACT [] xref: TAO:0005021 is_a: ZFA:0005020 ! central artery -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005022 @@ -18576,7 +18579,7 @@ synonym: "ORA" EXACT [] xref: TAO:0005022 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005023 @@ -18585,7 +18588,7 @@ namespace: zebrafish_anatomy def: "System responsible for generating hematopoietic cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005023 is_a: ZFA:0001439 ! anatomical system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005024 @@ -18595,7 +18598,7 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th xref: TAO:0005024 is_a: ZFA:0005249 ! vasculature relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005025 @@ -18607,11 +18610,11 @@ synonym: "DLAV" EXACT [] xref: TAO:0005025 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0001285 ! intersegmental vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001073 ! axial vasculature relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005026 @@ -18622,9 +18625,9 @@ synonym: "lateral head vein" EXACT [] synonym: "PHS" EXACT [] xref: TAO:0005026 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005027 @@ -18635,9 +18638,9 @@ synonym: "caudal cerebral vein" EXACT [] synonym: "PCeV" EXACT [] xref: TAO:0005027 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005028 @@ -18654,7 +18657,7 @@ xref: TAO:0005028 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000014 ! dorsal aorta relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0005029 @@ -18666,9 +18669,9 @@ synonym: "RBI" EXACT [] xref: TAO:0005029 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005041 ! anterior lateral plate mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0005030 @@ -18679,9 +18682,9 @@ synonym: "DCV" EXACT [] xref: TAO:0005030 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005031 @@ -18691,9 +18694,9 @@ def: "Vessel that connects to the primitive hindbrain channel and the basilar ar synonym: "DLV" EXACT [] xref: TAO:0005031 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005032 @@ -18703,7 +18706,7 @@ def: "Vein that connects to the hyaloid vein that drains the eye. External to e synonym: "OV" EXACT [] xref: TAO:0005032 is_a: ZFA:0000082 ! vein -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005033 @@ -18713,8 +18716,8 @@ def: "Is an pair of arteries that form from the intersegmental vessels at the le synonym: "vertebral arteries" EXACT PLURAL [] xref: TAO:0005033 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005034 @@ -18726,10 +18729,10 @@ xref: TAO:0005034 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0000477 ! posterior cardinal vein relationship: develops_from ZFA:0001057 ! intersegmental vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005035 @@ -18740,9 +18743,9 @@ synonym: "SIV" EXACT [] synonym: "vitelline vein" EXACT [] xref: TAO:0005035 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005036 @@ -18752,8 +18755,8 @@ def: "A continuation of the anterior mesenteric artery, which branches out from synonym: "SIA" EXACT [] xref: TAO:0005036 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005037 @@ -18773,9 +18776,9 @@ synonym: "" RELATED [] synonym: "supraintestinal veins" EXACT PLURAL [] xref: TAO:0005038 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005039 @@ -18784,9 +18787,9 @@ namespace: zebrafish_anatomy synonym: "ALM" EXACT [] xref: TAO:0005039 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001065 ! lateral mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005040 @@ -18795,9 +18798,9 @@ namespace: zebrafish_anatomy synonym: "PLM" EXACT [] xref: TAO:0005040 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001065 ! lateral mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005041 @@ -18806,9 +18809,9 @@ namespace: zebrafish_anatomy synonym: "ALPM" EXACT [] xref: TAO:0005041 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000121 ! lateral plate mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005042 @@ -18817,9 +18820,9 @@ namespace: zebrafish_anatomy synonym: "PLPM" EXACT [] xref: TAO:0005042 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000121 ! lateral plate mesoderm -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0005043 @@ -18831,7 +18834,7 @@ synonym: "naevus" EXACT [] xref: TAO:0005043 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005044 @@ -18852,7 +18855,7 @@ synonym: "hyaloid arteries" EXACT PLURAL [] xref: TAO:0005045 is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0005046 ! hyaloid vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005046 @@ -18873,7 +18876,7 @@ synonym: "hyaloid veins" EXACT PLURAL [] xref: TAO:0005047 is_a: ZFA:0000082 ! vein relationship: part_of ZFA:0005046 ! hyaloid vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005048 @@ -18883,8 +18886,8 @@ def: "Vessel that branches from cranial division of the internal carotid artery, synonym: "PPrA" EXACT [] xref: TAO:0005048 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005049 @@ -18895,8 +18898,8 @@ synonym: "PrA" EXACT [] xref: TAO:0005049 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005048 ! primitive prosencephalic artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005050 @@ -18906,8 +18909,8 @@ def: "The PLA branches ventrally from the CrDI. It extends rostrally along the synonym: "PLA" EXACT [] xref: TAO:0005050 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005051 @@ -18918,8 +18921,8 @@ synonym: "CMV" EXACT [] synonym: "communicating vessels" EXACT [] xref: TAO:0005051 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005052 @@ -18939,8 +18942,8 @@ def: "Artery that branches off the cranial division of the internal carotid arte synonym: "NCA" EXACT [] xref: TAO:0005053 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005054 @@ -18962,9 +18965,9 @@ def: "Drains the PLA loop proceeds straight caudally along the cranial midline j synonym: "MPLV" EXACT [] xref: TAO:0005055 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005056 @@ -18974,9 +18977,9 @@ def: "Vein that drains the median palatocerebral vein into the optic vein." [GOC synonym: "PLV" EXACT [] xref: TAO:0005056 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005057 @@ -18988,7 +18991,7 @@ xref: TAO:0005057 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005808 ! proepicardial cluster relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005058 @@ -18999,7 +19002,7 @@ xref: TAO:0005058 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0005057 ! epicardium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005059 @@ -19011,7 +19014,7 @@ synonym: "trabecula" RELATED [] xref: TAO:0005059 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005060 @@ -19021,7 +19024,7 @@ xref: TAO:0005060 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005059 ! trabecular layer relationship: part_of ZFA:0005061 ! ventricular myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005061 @@ -19032,7 +19035,7 @@ xref: TAO:0005061 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005062 @@ -19042,7 +19045,7 @@ def: "The outer layer the ventricular myocardium, muscle fibers are arranged in xref: TAO:0005062 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005061 ! ventricular myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005063 @@ -19075,7 +19078,7 @@ synonym: "heart valves" EXACT PLURAL [] xref: TAO:0005065 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005066 @@ -19086,7 +19089,7 @@ synonym: "bulbus arteriosus externa" EXACT [] xref: TAO:0005066 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005067 @@ -19118,7 +19121,7 @@ is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005601 ! sinoatrial ring relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005070 @@ -19132,7 +19135,7 @@ is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005073 ! atrioventricular ring relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005071 @@ -19153,10 +19156,10 @@ namespace: zebrafish_anatomy def: "A portion of endocardial tissue that is part of the atrioventricular ring." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005072 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001320 ! endocardium relationship: part_of ZFA:0005073 ! atrioventricular ring -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005073 @@ -19166,10 +19169,10 @@ def: "A ring of conduction tissue that forms in the atrioventricular canal." [ZF synonym: "AV ring" EXACT [] xref: TAO:0005073 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005074 @@ -19189,7 +19192,7 @@ synonym: "ventricular fast conduction system" EXACT [ZFIN:ZDB-PUB-120927-27] xref: TAO:0005075 is_a: ZFA:0005063 ! cardiac conduction system relationship: part_of ZFA:0000009 ! cardiac ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005076 @@ -19198,9 +19201,9 @@ namespace: zebrafish_anatomy def: "Is a portion of tissue that will develop into vasculature." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005076 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0005077 @@ -19209,7 +19212,7 @@ namespace: zebrafish_anatomy def: "The primordial vasculature that will develop into blood vessels by the process of tubulogenesis. The vascular cord is composed of angioblast or vascular endothelial cells in a solid linear mass called a cord. The cord then undergoes tubulogenesis to form the lumen of the vessels." [ZFIN:ZDB-PUB-040416-1] xref: TAO:0005077 is_a: ZFA:0005076 ! primordial vasculature -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0005078 @@ -19239,8 +19242,8 @@ synonym: "AMA" EXACT [] synonym: "rostral mesenteric artery" EXACT [] xref: TAO:0005080 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005081 @@ -19264,9 +19267,9 @@ synonym: "dorsal branch nasal ciliary arteries" EXACT PLURAL [] xref: TAO:0005082 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005083 @@ -19275,9 +19278,9 @@ namespace: zebrafish_anatomy xref: TAO:0005083 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005084 @@ -19287,8 +19290,8 @@ def: "These arteries branch dorsally from both sides of the posterior communicat synonym: "metencephalic arteries" EXACT PLURAL [] xref: TAO:0005084 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005085 @@ -19298,7 +19301,7 @@ def: "The nasal arteries start at the internal carotid artery and travel rostral synonym: "NA" EXACT [] xref: TAO:0005085 is_a: ZFA:0000005 ! artery -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005086 @@ -19310,7 +19313,7 @@ synonym: "subclavian artery" EXACT [] xref: TAO:0005086 is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0005301 ! pectoral fin blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005087 @@ -19321,7 +19324,7 @@ synonym: "PV" EXACT [] xref: TAO:0005087 is_a: ZFA:0000082 ! vein relationship: part_of ZFA:0005301 ! pectoral fin blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005088 @@ -19332,8 +19335,8 @@ synonym: "caudal mesenteric artery" EXACT [] synonym: "PMA" EXACT [] xref: TAO:0005088 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005089 @@ -19343,7 +19346,7 @@ def: "An elaborate set of vessels that branch off caudally from the anterior mes synonym: "SBA" EXACT [] xref: TAO:0005089 is_a: ZFA:0000005 ! artery -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005090 @@ -19356,7 +19359,7 @@ xref: TAO:0005090 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005035 ! subintestinal vein relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005091 @@ -19378,8 +19381,8 @@ def: "Paired veins that sprout from the dorsal midline junction and dive ventral synonym: "MsV" EXACT [] xref: TAO:0005092 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005093 @@ -19390,7 +19393,7 @@ synonym: "NV" EXACT [] xref: TAO:0005093 is_a: ZFA:0000082 ! vein relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005094 @@ -19404,7 +19407,7 @@ xref: TAO:0005094 is_a: ZFA:0005933 ! mature plexus is_a: ZFA:0007057 ! ocular blood vessel relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005095 @@ -19423,7 +19426,7 @@ def: "Vasculature of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005096 is_a: ZFA:0005095 ! fin vasculature relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005097 @@ -19479,8 +19482,8 @@ namespace: zebrafish_anatomy def: "Stripe of tissue fated to become the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005102 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005103 @@ -19508,7 +19511,7 @@ synonym: "lymph vessels" EXACT PLURAL [] xref: TAO:0005105 is_a: ZFA:0005249 ! vasculature relationship: part_of ZFA:0000385 ! lymphatic system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005106 @@ -19555,7 +19558,7 @@ def: "The thoracic duct is the first perfused lymphatic, located between the dor xref: TAO:0005110 is_a: ZFA:0005296 ! axial lymph vessel relationship: develops_from ZFA:0005605 ! lymphangioblast cord -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005111 @@ -19565,18 +19568,18 @@ def: "Tract that originates in the telencephalon lies medial to the lateral fore synonym: "medial forebrain bundles" EXACT PLURAL [] xref: TAO:0005111 is_a: ZFA:0001682 ! white matter -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005112 name: dorsal lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880] +def: "One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-070907-34] synonym: "dorsal lateral lines" EXACT PLURAL [] xref: TAO:0005112 is_a: ZFA:0001469 ! lateral line relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005113 @@ -19587,7 +19590,7 @@ synonym: "neuromast dorsal" EXACT [] xref: TAO:0005113 is_a: ZFA:0000243 ! neuromast relationship: part_of ZFA:0005112 ! dorsal lateral line -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005114 @@ -19606,7 +19609,7 @@ synonym: "primary posterior lateral line primordia" EXACT PLURAL [] synonym: "primI" EXACT [] xref: TAO:0005115 is_a: ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005116 @@ -19616,8 +19619,8 @@ def: "Second lateral line primordium. These primordia move at 0.2 somites/hour synonym: "secondary posterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005116 is_a: ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005117 @@ -19627,9 +19630,9 @@ def: "A migrating group of cells originating from an anterior lateral line placo synonym: "anterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005117 is_a: ZFA:0000228 ! lateral line primordium -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005118 @@ -19639,9 +19642,9 @@ def: "A migrating group of cells originating from the middle lateral line placod synonym: "middle lateral line primordia" EXACT PLURAL [] xref: TAO:0005118 is_a: ZFA:0000228 ! lateral line primordium -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005119 @@ -19651,8 +19654,8 @@ def: "A surface structure that will eventually grow to form a barbel. The prim synonym: "barbel primordia" EXACT PLURAL [] xref: TAO:0005119 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0005120 @@ -19670,9 +19673,9 @@ def: "Dorsolateral placode that gives rise to the middle lateral line." [GOC:cvs synonym: "middle lateral line placodes" EXACT PLURAL [] xref: TAO:0005121 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005122 @@ -19681,9 +19684,9 @@ namespace: zebrafish_anatomy def: "Dorsal region of the axial hypoblast." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001378 ! axial hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0005123 @@ -19715,7 +19718,7 @@ synonym: "intestinal villi" EXACT PLURAL [] xref: TAO:0005125 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0005126 @@ -19776,7 +19779,7 @@ id: ZFA:0005132 name: visceral peritoneum namespace: zebrafish_anatomy def: "The part of peritoneum that is a serous membrane covers the external surfaces of most abdominal organs." [GOC:cvs, ORCiD:0000-0002-2244-7917] -synonym: "tunica serosa" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] +synonym: "tunica serosa" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0005132 is_a: ZFA:0005425 ! serous membrane relationship: part_of ZFA:0005120 ! peritoneum @@ -19848,7 +19851,7 @@ def: "Mesenchyme enclosed by dental organ." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005139 is_a: ZFA:0000113 ! head mesenchyme relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005140 @@ -19860,7 +19863,7 @@ synonym: "tooth mesenchyme" EXACT [] xref: TAO:0005140 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005139 ! dental mesenchyme -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005141 @@ -19911,7 +19914,7 @@ synonym: "muscles" EXACT PLURAL [] xref: TAO:0005145 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000548 ! musculature system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005146 @@ -19921,7 +19924,7 @@ def: "An area of medulla oblongata, outside the blood-brain barrier. The apical xref: TAO:0005146 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005147 @@ -19931,7 +19934,7 @@ def: "A portion of tissue that is regrowing after damage or amputation." [GOC:cv synonym: "regenerating tissues" EXACT PLURAL [] xref: TAO:0005147 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005148 @@ -20098,7 +20101,7 @@ def: "Ducts that transport enzymes between organs in the digestive system." [GOC xref: TAO:0005162 is_a: ZFA:0005171 ! duct relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Ceri creation_date: 2009-04-20T04:51:36Z @@ -20111,7 +20114,7 @@ comment: Should be located in rather then part_of when we get the appropriate re xref: TAO:0005163 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:33:42Z @@ -20123,7 +20126,7 @@ def: "Digestive system duct that collects bile from the canaliculus and transpor xref: TAO:0005164 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:39:12Z @@ -20135,7 +20138,7 @@ def: "Digestive system duct that collects bile from the hepatic bile duct and th xref: TAO:0005165 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0001100 ! hepatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:43:23Z @@ -20147,7 +20150,7 @@ def: "Duct that connects the gall bladder and the common bile duct." [GOC:cvs, O xref: TAO:0005166 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:56:39Z @@ -20161,7 +20164,7 @@ synonym: "papilla duodeni major" RELATED [] synonym: "papilla Vateri" EXACT [] xref: TAO:0005167 is_a: ZFA:0005162 ! digestive system duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:59:27Z @@ -20184,7 +20187,7 @@ def: "Duct that collects bile from the bile ductules and connects to the extrahe xref: TAO:0005169 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:19:40Z @@ -20196,7 +20199,7 @@ def: "Bile duct that collects from the intrahepatic ducts and feeds into the com xref: TAO:0005170 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0001100 ! hepatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:26:36Z @@ -20220,7 +20223,7 @@ synonym: "first lobe" EXACT [] xref: TAO:0005172 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2009-04-27T05:51:33Z @@ -20235,7 +20238,7 @@ synonym: "second lobe" EXACT [] xref: TAO:0005173 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T05:59:16Z @@ -20249,7 +20252,7 @@ synonym: "third lobe" EXACT [] xref: TAO:0005174 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2009-04-27T06:04:51Z @@ -20263,7 +20266,7 @@ subset: cell_slim synonym: "primary commissural interneuron" EXACT [] xref: TAO:0005175 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T01:41:54Z @@ -20277,7 +20280,7 @@ subset: cell_slim synonym: "secondary commissural interneuron" EXACT [] xref: TAO:0005176 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:07:49Z @@ -20292,7 +20295,7 @@ synonym: "V2b interneuron" RELATED [] synonym: "ventral longitudinal interneuron" EXACT [] xref: TAO:0005177 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:14:18Z @@ -20306,7 +20309,7 @@ subset: cell_slim synonym: "dorsal longitudinal interneuron" EXACT [] xref: TAO:0005178 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:21:58Z @@ -20320,7 +20323,7 @@ subset: cell_slim synonym: "middle primary motoneuron" EXACT [] xref: TAO:0005179 is_a: ZFA:0009244 ! primary motor neuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:02:28Z @@ -20334,7 +20337,7 @@ subset: cell_slim synonym: "rostral primary motoneuron" EXACT [] xref: TAO:0005180 is_a: ZFA:0009244 ! primary motor neuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:05:40Z @@ -20348,7 +20351,7 @@ subset: cell_slim synonym: "variable primary motoneuron" EXACT [] xref: TAO:0005181 is_a: ZFA:0009244 ! primary motor neuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:38:21Z @@ -20855,7 +20858,7 @@ synonym: "CVC" EXACT [] xref: TAO:0005219 is_a: ZFA:0000099 ! brain vasculature relationship: part_of ZFA:0001443 ! choroid plexus -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2009-07-09T02:58:20Z @@ -20866,8 +20869,8 @@ namespace: zebrafish_anatomy def: "A melanophore stripe that forms the immature pigment pattern." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005220 is_a: ZFA:0001463 ! melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-07-09T03:59:45Z @@ -20888,7 +20891,7 @@ namespace: zebrafish_anatomy def: "A larval melanophore stripe that forms a band, of pigmentation extending from the bases of the eyes on each side of the midline to the top of the tail, that underlies the myotomes bilaterally, still is dorsal to the yolk." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005222 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2009-07-09T04:05:57Z @@ -20899,7 +20902,7 @@ namespace: zebrafish_anatomy def: "The larval melanophore stripe that is at the level of the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005223 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2009-07-09T04:29:18Z @@ -20910,7 +20913,7 @@ namespace: zebrafish_anatomy def: "The larval melanophore stripe that forms a band over the ventral surface of the yolk sac." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005224 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-07-09T04:30:34Z @@ -20944,9 +20947,9 @@ synonym: "proto neuromast" RELATED [] synonym: "proto-neuromast" RELATED [] xref: TAO:0005227 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2009-07-09T04:49:53Z @@ -20959,7 +20962,7 @@ synonym: "choroid" EXACT [ISBN:1402070861] xref: TAO:0005229 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-14T02:05:16Z @@ -20996,7 +20999,7 @@ synonym: "larval VeLD" RELATED [] synonym: "multipolar commissural descending interneuron" EXACT [] xref: TAO:0005232 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:46:32Z @@ -21011,7 +21014,7 @@ synonym: "commissural descending interneurons" EXACT [ZFIN:ZDB-PUB-081114-2] synonym: "V2a interneuron" RELATED [] xref: TAO:0005233 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:55:01Z @@ -21024,7 +21027,7 @@ subset: cell_slim synonym: "commissural longitudinal ascending interneuron" EXACT [] xref: TAO:0005234 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:14:51Z @@ -21037,7 +21040,7 @@ subset: cell_slim synonym: "unipolar commissural descending interneuron" RELATED [] xref: TAO:0005235 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:26:07Z @@ -21054,7 +21057,7 @@ synonym: "prorubricyte" EXACT [ZFIN:ZDB-PUB-070221-1] xref: CL:0000549 xref: TAO:0005236 is_a: ZFA:0005237 ! erythroblast -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-08-10T05:29:27Z @@ -21097,7 +21100,7 @@ xref: CL:0007022 xref: TAO:0005239 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2009-08-10T06:26:10Z @@ -21175,7 +21178,7 @@ synonym: "auditory support cell" EXACT [] xref: CL:0005014 xref: TAO:0005244 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:41:03Z @@ -21190,8 +21193,8 @@ xref: CL:0005002 xref: TAO:0002148 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:53:40Z @@ -21219,7 +21222,7 @@ synonym: "circumferential ascending interneuron" EXACT [] synonym: "V1 interneuron" RELATED [] xref: TAO:0005247 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-08-21T04:22:15Z @@ -21233,7 +21236,7 @@ xref: TAO:0005248 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005027 ! posterior cerebral vein relationship: part_of ZFA:0005219 ! choroid plexus vascular circuit -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2009-11-02T04:07:52Z @@ -21246,7 +21249,7 @@ xref: TAO:0001079 xref: TAO:0005249 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-11-10T02:31:54Z @@ -21270,7 +21273,7 @@ synonym: "vasculature" RELATED [] xref: TAO:0005251 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:16:24Z @@ -21294,7 +21297,7 @@ synonym: "parietal epithelial layer" EXACT [] xref: TAO:0005253 is_a: ZFA:0001498 ! simple squamous epithelium relationship: part_of ZFA:0005254 ! renal glomerular capsule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2009-11-11T01:39:19Z @@ -21307,7 +21310,7 @@ synonym: "Bowman's capsule " EXACT [] xref: TAO:0005254 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2009-11-11T01:45:02Z @@ -21330,7 +21333,7 @@ synonym: "intestinal crypt" RELATED [ZFIN:ZDB-PUB-090217-11] xref: TAO:0005256 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-07T12:26:13Z @@ -21500,9 +21503,9 @@ synonym: "juvenile ovary" EXACT [ZFIN:ZDB-PUB-070305-2] xref: TAO:0005272 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001262 ! gonad primordium -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2009-12-09T11:35:20Z @@ -21597,7 +21600,7 @@ synonym: "Malpighian corpuscle" EXACT [] xref: TAO:0005281 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0005282 ! nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T01:11:46Z @@ -21609,7 +21612,7 @@ def: "Functional unit of the kidney that filters waste." [GOC:cvs, ORCiD:0000-00 xref: TAO:0002153 is_a: ZFA:0001478 ! anatomical cluster relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T02:47:46Z @@ -21624,7 +21627,7 @@ synonym: "urinary space" EXACT [] xref: TAO:0005283 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T02:51:01Z @@ -21638,7 +21641,7 @@ is_a: ZFA:0005250 ! capillary relationship: part_of ZFA:0001288 ! renal glomerulus relationship: part_of ZFA:0005305 ! kidney vasculature relationship: part_of ZFA:0005590 ! capillary loop nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:00:45Z @@ -21651,7 +21654,7 @@ synonym: "glomerular filtration membrane" EXACT [] xref: TAO:0005285 is_a: ZFA:0001485 ! basal lamina relationship: part_of ZFA:0001288 ! renal glomerulus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:26:30Z @@ -21663,7 +21666,7 @@ def: "Middle layer of the glomerular basement membrane." [GOC:cvs, ORCiD:0000-00 xref: TAO:0005286 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:52:52Z @@ -21675,7 +21678,7 @@ def: "Layer of the glomerular basement membrane adjacent to the glomerular capil xref: TAO:0005287 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:56:00Z @@ -21687,7 +21690,7 @@ def: "Layer of the glomerular basement membrane adjacent to the podocytes and ca xref: TAO:0005288 is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:56:32Z @@ -21699,7 +21702,7 @@ def: "Tubes in the kidney that collect and transport urine." [GOC:cvs, ORCiD:000 xref: TAO:0005289 is_a: ZFA:0005171 ! duct relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T04:36:59Z @@ -21874,7 +21877,7 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th xref: TAO:0005305 is_a: ZFA:0005249 ! vasculature relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-20T03:02:06Z @@ -21886,7 +21889,7 @@ def: "Blood vessel part of kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005306 is_a: ZFA:0005314 ! blood vessel relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-20T03:02:27Z @@ -21899,7 +21902,7 @@ xref: TAO:0002139 is_a: ZFA:0005255 ! arteriole relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T03:02:56Z @@ -21912,7 +21915,7 @@ xref: TAO:0002140 is_a: ZFA:0005255 ! arteriole relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T03:05:49Z @@ -21923,7 +21926,7 @@ namespace: zebrafish_anatomy def: "Capillary that is part of the pronephric glomerulus. Glomerular capillary endothelial membranes in zebrafish normally have a fenestrated morphology that is visible at the ultrastructural level." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-000824-1] xref: TAO:0005309 is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus created_by: Ceri creation_date: 2010-01-29T11:29:44Z @@ -21936,9 +21939,9 @@ def: "Portion of tissue that encapsulates the glomerulus of the pronephros." [GO synonym: "Bowman's capsule " EXACT [] xref: TAO:0005310 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:39:01Z @@ -21950,7 +21953,7 @@ def: "Simple squamous epithelium that lines the capsule of the pronephric glomer synonym: "pronephric parietal epithelial layer" EXACT [] xref: TAO:0005311 is_a: ZFA:0001498 ! simple squamous epithelium -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0005310 ! pronephric glomerular capsule created_by: Ceri creation_date: 2010-01-29T11:40:01Z @@ -21965,9 +21968,9 @@ synonym: "inter-glomerular space" EXACT [] synonym: "urinary space" EXACT [] xref: TAO:0005312 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:41:05Z @@ -21979,7 +21982,7 @@ def: "Membrane between the pronephric podocytes and the pronephric glomerular ca synonym: "pronephric glomerular filtration membrane" EXACT [] xref: TAO:0005313 is_a: ZFA:0001485 ! basal lamina -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus created_by: Ceri creation_date: 2010-01-29T11:59:03Z @@ -22014,9 +22017,9 @@ synonym: "fin membrane pectoral fin bud" RELATED [] xref: TAO:0005316 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000085 ! apical ectodermal ridge pectoral fin bud -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-02-10T02:37:39Z @@ -22030,7 +22033,7 @@ xref: TAO:0005317 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005316 ! fin fold pectoral fin bud relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-02-10T03:27:29Z @@ -22052,7 +22055,7 @@ def: "Lymph vessel that is located between the somites." [GOC:cvs, ORCiD:0000-00 synonym: "islv" EXACT [] xref: TAO:0005319 is_a: ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:28:00Z @@ -22063,7 +22066,7 @@ namespace: zebrafish_anatomy synonym: "dllv" EXACT [] xref: TAO:0005320 is_a: ZFA:0005296 ! axial lymph vessel -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:29:42Z @@ -22090,7 +22093,7 @@ xref: TAO:0005322 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009374 ! kidney epithelial cell relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-02-10T06:32:34Z @@ -22169,8 +22172,8 @@ xref: CL:0005001 xref: TAO:0005328 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -22184,8 +22187,8 @@ xref: CL:0005003 xref: TAO:0005329 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -22199,8 +22202,8 @@ xref: CL:0005004 xref: TAO:0005331 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -22214,8 +22217,8 @@ xref: CL:0005005 xref: TAO:0005332 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -22249,8 +22252,8 @@ def: "Embryonic structure that forms from the anterior gut epithelium at the lev xref: TAO:0005335 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0005336 ! presumptive swim bladder -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2010-03-18T03:59:33Z @@ -22263,9 +22266,9 @@ synonym: "swim bladder anlage" RELATED [ZFIN:ZDB-PUB-100202-11] xref: TAO:0005336 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-03-18T04:20:42Z @@ -22277,8 +22280,8 @@ def: "Portion of tissue that forms from the swim bladder epithelium at the anter xref: TAO:0002145 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000076 ! swim bladder -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-03-18T04:28:20Z @@ -22292,7 +22295,7 @@ synonym: "recessus posterior " EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0005338 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T05:40:53Z @@ -22368,7 +22371,7 @@ def: "Connective tissue in which fat is stored. All adipose tissue in the zebraf synonym: "white adipose tissue" EXACT [] xref: TAO:0002134 is_a: ZFA:0001477 ! portion of tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-19T10:04:38Z @@ -22380,7 +22383,7 @@ def: "Portion of the pancreatic duct, external to the pancreas body that connect xref: TAO:0005346 is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2010-03-19T03:17:51Z @@ -22813,7 +22816,7 @@ def: "Anatomical space that is an opening in a bone, usually for passage of bloo synonym: "foramina" EXACT PLURAL [] xref: TAO:0001736 is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:01:27Z @@ -22834,7 +22837,7 @@ namespace: zebrafish_anatomy def: "Anatomical space that is a concavity, shallow depression, or groove on a bone." [TAO:curator] xref: TAO:0001743 is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:04:59Z @@ -22845,7 +22848,7 @@ namespace: zebrafish_anatomy def: "Anatomical space that is the external opening of a gill slit connecting the pharyngeal cavity to the exterior. Gill opening is usually paired and located on the lateral or ventral surfaces of the head." [TAO:curator] xref: TAO:0002057 is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:06:34Z @@ -22878,7 +22881,7 @@ def: "Sensory canal associated with the infraorbital bones. Located in close pro xref: TAO:0001811 is_a: ZFA:0005443 ! sensory canal relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2010-04-23T01:44:27Z @@ -22924,7 +22927,7 @@ def: "Sensory canal contained in the nasal and frontal bones. It contains 4 or xref: TAO:0001810 is_a: ZFA:0005443 ! sensory canal relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2010-04-23T02:00:48Z @@ -23039,7 +23042,7 @@ namespace: zebrafish_anatomy def: "Barbel that is associated with the anterior nostril. Anterior nasal barbel is paired." [TAO:curator] xref: TAO:0001937 is_a: ZFA:0000622 ! barbel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T05:12:00Z @@ -23096,7 +23099,7 @@ def: "Duct that crosses the midline connecting the sacculi." [GOC:cvs, GOC:ymb, xref: TAO:0005412 is_a: ZFA:0005171 ! duct relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: ceri creation_date: 2010-05-17T03:08:14Z @@ -23191,7 +23194,7 @@ namespace: zebrafish_anatomy def: "Joint that articulates the autopalatine cartilage or bone and maxilla." [TAO:curator] xref: TAO:0001942 is_a: ZFA:0001596 ! joint -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2010-05-25T05:32:51Z @@ -23234,7 +23237,7 @@ namespace: zebrafish_anatomy def: "A multi-tissue structure that is comprised of a secretory epithelial layer and a connective tissue layer." [http://en.wikipedia.org/wiki/Serous_membrane] xref: TAO:0005425 is_a: ZFA:0001488 ! multi-tissue structure -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-05-26T10:36:36Z @@ -23316,7 +23319,7 @@ namespace: zebrafish_anatomy def: "Barbel that originates on the chin." [TAO:curator] xref: TAO:0002024 is_a: ZFA:0000622 ! barbel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T05:43:41Z @@ -23327,7 +23330,7 @@ namespace: zebrafish_anatomy def: "Acellular anatomical structure that is a natural outgrowth, prominence, or point that is part of the surface of a tooth." [TAO:curator] xref: TAO:0001973 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-05-26T06:11:37Z @@ -23339,7 +23342,7 @@ def: "Skeletal element which is a slender, horny, flexible, unsegmented fibril w synonym: "actinotrichia" EXACT PLURAL [] xref: TAO:0000089 is_a: ZFA:0005494 ! skeletal element -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-06-08T04:31:42Z @@ -23377,8 +23380,8 @@ name: pectoral fin motor nerve 1 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:22:40Z @@ -23388,8 +23391,8 @@ name: pectoral fin motor nerve 2 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:27:40Z @@ -23399,8 +23402,8 @@ name: pectoral fin motor nerve 3 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and 2 and rostral of nerve 4 and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:28:55Z @@ -23473,7 +23476,7 @@ def: "Sensory canal associated with the preopercle bone. It lies in close proxim xref: TAO:0001813 is_a: ZFA:0005443 ! sensory canal relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2010-06-25T10:58:48Z @@ -23484,7 +23487,7 @@ namespace: zebrafish_anatomy def: "An anatomical space that is an opening, usually at the end of a canal or duct, on the surface of the integument or the lining of an internal anatomical space." [TAO:curator] xref: TAO:0001791 is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-28T11:08:35Z @@ -23494,8 +23497,8 @@ name: pectoral fin motor nerve 4 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the ventral side of the fin and innervates the ventral side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-28T01:47:43Z @@ -23507,7 +23510,7 @@ def: "Sensory canal associated with the angular and dentary bones. Located ante xref: TAO:0001814 is_a: ZFA:0005443 ! sensory canal relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2010-06-25T12:27:58Z @@ -23520,7 +23523,7 @@ synonym: "TPC" RELATED [ZFIN:ZDB-PUB-961014-1268] synonym: "tract of the posterior commissure" EXACT [ZFIN:ZDB-PUB-961014-421] is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000320 ! caudal commissure -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-07-21T01:49:43Z @@ -23591,7 +23594,7 @@ namespace: zebrafish_anatomy def: "Space that contains perilymph." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:03:28Z @@ -23628,9 +23631,9 @@ name: oral ectoderm namespace: zebrafish_anatomy def: "Ectoderm of the oral region." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0000016 ! ectoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-07-21T03:22:11Z @@ -23899,9 +23902,9 @@ name: endocardial precursor namespace: zebrafish_anatomy def: "Is a portion of tissue part of the heart primordium which will give rise to the endocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:50:10Z @@ -23911,9 +23914,9 @@ name: myocardial precursor namespace: zebrafish_anatomy def: "Portion of tissue that will develop into the myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:53:48Z @@ -23926,7 +23929,7 @@ synonym: "optic fissure" RELATED [] is_a: ZFA:0001690 ! groove relationship: develops_from ZFA:0001284 ! optic fissure relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2010-07-21T03:00:49Z @@ -23959,7 +23962,7 @@ namespace: zebrafish_anatomy def: "Surface structure that is a portion of skin that projects or hangs from the body." [TAO:curator] xref: TAO:0001951 is_a: ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:21:23Z @@ -23971,7 +23974,7 @@ def: "Surface structure that is the region of the head in front of and between t xref: TAO:0001712 is_a: ZFA:0001308 ! organism subdivision relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:22:07Z @@ -24004,7 +24007,7 @@ synonym: "circuli" EXACT PLURAL [] xref: TAO:0002051 is_a: ZFA:0000037 ! anatomical structure relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:33:11Z @@ -24354,7 +24357,7 @@ namespace: zebrafish_anatomy def: "Scale that is associated with the lateral line sensory canal." [TAO:curator] xref: TAO:0001824 is_a: ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:49:27Z @@ -24417,7 +24420,7 @@ def: "Anatomical space between bones of the neurocranium. Frequently closes dur xref: TAO:0001738 is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:27:16Z @@ -24641,7 +24644,7 @@ namespace: zebrafish_anatomy def: "Anatomical space that is the concavity containing the eye." [TAO:curator] xref: TAO:0001967 is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:17:20Z @@ -24652,9 +24655,9 @@ namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "angiogenic sprout" RELATED [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-09-23T05:54:14Z @@ -24689,7 +24692,7 @@ def: "Acellular anatomical structure that is the innermost layer of the optic ch synonym: "vitreous lamina" EXACT [] is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-10T02:16:43Z @@ -24701,7 +24704,7 @@ def: "Multi-tissue structure that composes the opaque fibrous outer layer of the xref: TAO:0002289 is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-11-11T10:53:23Z @@ -24764,7 +24767,7 @@ namespace: zebrafish_anatomy def: "Portion of the iris which contains bundles of fibers, most of which are oriented radially around the pupil. The stroma is innervated by the iris blood vessels and develops from the periocular mesenchyme." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-12-01T02:28:06Z @@ -24775,7 +24778,7 @@ namespace: zebrafish_anatomy def: "The line where the cornea and the sclera meet." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090309-8] is_a: ZFA:0001689 ! anatomical line relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-12T03:45:32Z @@ -24786,7 +24789,7 @@ namespace: zebrafish_anatomy def: "Duct present in the angle where the cornea meets the ciliary zone that absorbs the aqueous humor." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0005171 ! duct relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-11-12T03:51:50Z @@ -24796,8 +24799,8 @@ name: periocular mesenchyme namespace: zebrafish_anatomy def: "Head mesenchyme surrounding the immature eye that gives rise to specialized structures of the anterior segment of the eye." [ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-12-02T12:29:18Z @@ -24820,7 +24823,7 @@ namespace: zebrafish_anatomy def: "The lens capsule is a modified basement membrane that completely surrounds the ocular lens." [GOC:cvs, ORCiD:0000-0002-2244-7917, PMID:18773892] is_a: ZFA:0000382 ! acellular anatomical structure relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-12-03T11:36:36Z @@ -24832,7 +24835,7 @@ def: "Portion of tissue that are compact accumulations of neurons having roughly synonym: "brain nuclei" EXACT PLURAL [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-01-28T05:31:14Z @@ -24883,9 +24886,9 @@ namespace: zebrafish_anatomy def: "Rostral portion of pars anterior of the adenohypophysis where corticotropes and lactotropes localize." [ZFIN:ZDB-PUB-080616-4] synonym: "rostral pars distalis" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001195 ! pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2011-04-13T11:44:33Z @@ -24896,9 +24899,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of pars anterior of the adenohypophysis where somatotropes, thyrotropes and gonadotropes are localized. The proximal pars anterior has functional homology to the mammalian pars tuberalis, secreting the same hormones." [ZFIN:ZDB-PUB-080616-4] synonym: " proximal pars distalis" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001195 ! pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2011-04-13T02:37:52Z @@ -24959,7 +24962,7 @@ namespace: zebrafish_anatomy def: "Cluster of cells comprising a portion of tissue which gives rise to new mesonephric nephrons. The cluster contains self-renewing stem cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-110131-33] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2011-04-26T04:26:56Z @@ -25023,7 +25026,7 @@ namespace: zebrafish_anatomy def: "An anatomical structure that is regional part of the central nervous system where there is a significant bend of the axis." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0000037 ! anatomical structure relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-05-02T01:03:43Z @@ -25034,8 +25037,8 @@ namespace: zebrafish_anatomy def: "Non-material anatomical entity of two dimensions, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures." [CARO:MAH, ORCiD:0000-0001-9114-8737] xref: CARO:0000010 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ZFIN creation_date: 2011-03-22T10:34:12Z @@ -25059,7 +25062,7 @@ def: "Fin that is one of a pair located ventrally on the organism." [TAO:curator xref: TAO:0002278 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0001383 ! fin bud -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-11-11T11:22:21Z @@ -25071,7 +25074,7 @@ def: "Fin that is an unpaired fin located in the sagittal plane of the organism. xref: TAO:0002276 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0000040 ! median fin fold -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-11T11:33:02Z @@ -25108,10 +25111,10 @@ name: sinoatrial region namespace: zebrafish_anatomy def: "Region at venious pole of heart tube that initiates heart beat." [ZFIN:ZDB-PUB-101115-23] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-22T04:14:44Z @@ -25122,9 +25125,9 @@ namespace: zebrafish_anatomy def: "Ring of cardiac conduction tissue around the sinoatrial region of the heart tube that performs pacemaker function." [ZFIN:ZDB-PUB-101115-23] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005600 ! sinoatrial region -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2011-11-22T04:16:19Z @@ -25143,7 +25146,7 @@ name: lymphangiogenic sprout namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new lymph vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100719-62] is_a: ZFA:0005559 ! vascular sprouts -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-12-27T12:39:43Z @@ -25153,7 +25156,7 @@ name: angiogenic sprout namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new blood vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005559 ! vascular sprouts -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-12-27T12:41:09Z @@ -25165,7 +25168,7 @@ def: "The primordial vasculature that will develop into lymph vessels. The lymp synonym: "parachordal lymphangioblast string" EXACT [ZFIN:ZDB-PUB-110613-5] is_a: ZFA:0005076 ! primordial vasculature relationship: develops_from ZFA:0000477 ! posterior cardinal vein -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2011-12-27T12:45:30Z @@ -25371,8 +25374,8 @@ def: "Space enclosed by the trabeculae cranii. The anterior tip of the notochor synonym: "hypophyseal fenestrae" EXACT PLURAL [] xref: TAO:0005269 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2012-03-15T03:52:38Z @@ -25623,9 +25626,9 @@ name: primitive pectoral fin adductor namespace: zebrafish_anatomy def: "Adductor that originates at the cleithrum the muscle fibers run in sheets along the endoskeletal disk extending dorsally and caudally from its base. Distally, the muscles insert onto the fin membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050920-7] is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2012-05-08T03:51:06Z @@ -25635,7 +25638,7 @@ name: primitive pectoral fin abductor namespace: zebrafish_anatomy def: "Abductor that originates at the cleithrum the muscle fibers run in sheets along the endoskeletal disk extending dorsally and caudally from its base. Distally, the muscles insert onto the fin membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050920-7] is_a: ZFA:0005269 ! abductor muscle -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2012-05-08T03:59:41Z @@ -25677,7 +25680,7 @@ namespace: zebrafish_anatomy def: "Endochondral process of the autopalatine that forms the socket of the autopalatine-preethmoid joint." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001637 ! bony projection relationship: part_of ZFA:0000620 ! autopalatine -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2012-09-25T03:42:27Z @@ -25738,7 +25741,7 @@ def: "Multi-tissue structure part of the olfactory bulb that is roughly sphero is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005668 ! olfactory bulb protoglomerulus relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-03-19T02:15:11Z @@ -25807,9 +25810,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the olfactory bulb comprised of ciliated and microvillous olfactory sensory neurons projections that form specialized neuropilar regions comprised of olfactory sensor axons and the dendrites of olfactory bulb neurons." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120330-2] synonym: "glomerular precursors" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T11:55:43Z @@ -25851,7 +25854,7 @@ namespace: zebrafish_anatomy def: "Single large glomerulus located in the ventral posterior region of the maturing glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "VPG" RELATED [] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:17:00Z @@ -25862,7 +25865,7 @@ namespace: zebrafish_anatomy def: "Central region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:25:20Z @@ -25873,7 +25876,7 @@ namespace: zebrafish_anatomy def: "Dorsal region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:26:28Z @@ -25884,7 +25887,7 @@ namespace: zebrafish_anatomy def: "Lateral region of the glomerular layer of the olfactory bulb. The lateral region of the olfactory bulb consisted of morphologically diverse glomeruli and a diffuse aggregate of OSN axons, the lateral plexus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:27:13Z @@ -25895,7 +25898,7 @@ namespace: zebrafish_anatomy def: "Medial region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:28:47Z @@ -25906,7 +25909,7 @@ namespace: zebrafish_anatomy def: "Ventral region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:29:39Z @@ -26359,7 +26362,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Dorsolateral protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG1" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T03:52:20Z @@ -26370,7 +26373,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Ventromedial protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG2" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:06:52Z @@ -26381,7 +26384,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Dorsomedial protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG3" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:08:18Z @@ -26392,7 +26395,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Ventrolateral protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG4" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:08:37Z @@ -26403,7 +26406,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Most lateral protoglomerulus in the central zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ1" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:13:36Z @@ -26414,7 +26417,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 1." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ2" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:20:35Z @@ -26425,7 +26428,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 2." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ3" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:21:01Z @@ -26436,7 +26439,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 3." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ4" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:35:43Z @@ -26447,7 +26450,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Most medial protoglomerulus in the central zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ5" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:36:02Z @@ -26458,7 +26461,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most posterio-lateral of the medial protoglomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG1 " RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:39:34Z @@ -26469,7 +26472,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most dorsally located medial protoglomerulus and medial to protoglomerulus 1." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG2" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:18Z @@ -26480,7 +26483,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Located between medial glomerulus 2 and medial glomerulus 4 along dorsal-ventral axis of the medial region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG3" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:38Z @@ -26491,7 +26494,7 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most ventral of the medial protoglomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG4" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:57Z @@ -26565,7 +26568,7 @@ namespace: zebrafish_anatomy def: "Anatomical space, part of the lacunocanalicular system that connects lacuna within bone tissue allowing osteocyte projections to connect." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-11518-14] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T12:10:17Z @@ -26576,7 +26579,7 @@ namespace: zebrafish_anatomy def: "Anatomical space a small cavity, in the matrix of bone tissue. Part of the lacunocanalicular system." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T12:19:22Z @@ -26589,8 +26592,8 @@ synonym: "endodermal rod" RELATED [ZFIN:ZDB-PUB-030115-26] synonym: "intestinal anlage" RELATED [ZFIN:ZDB-PUB-050120-6.] is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Ceri creation_date: 2013-07-23T03:03:23Z @@ -26601,8 +26604,8 @@ namespace: zebrafish_anatomy def: "Portion of the intestinal rod that loops to left between 26-30hpf and gives rise to the intestinal bulb and liver and anterior pancreatic primordium. The endoderm at this stage is a compact mass of cells with little to no polarization." [ZFIN:ZDB-PUB-031103-19] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-07-23T03:06:11Z @@ -26615,7 +26618,7 @@ subset: cell_slim xref: CL:0002064 is_a: ZFA:0009277 ! acinar cell relationship: part_of ZFA:0005741 ! pancreatic acinar gland -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:13:45Z @@ -26629,7 +26632,7 @@ synonym: "CAC" EXACT [ZFIN:ZDB-PUB-050623-3] xref: CL:0002080 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: part_of ZFA:0005741 ! pancreatic acinar gland -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:16:32Z @@ -26642,7 +26645,7 @@ synonym: "exocrine glands pancreas" EXACT [] synonym: "pancreatic acini" EXACT [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:42:33Z @@ -26687,9 +26690,9 @@ subset: cell_slim synonym: "notochord sheath cell" RELATED [] xref: CL:0007007 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2013-07-30T04:09:49Z @@ -26701,7 +26704,7 @@ def: "A cell whose primary function is to provide structural support, to provide subset: cell_slim xref: CL:0000293 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-30T04:14:44Z @@ -26713,9 +26716,9 @@ def: "Structural cell of notochord that contain one large fluid-filled intracell subset: cell_slim synonym: "chordocytes" EXACT [] is_a: ZFA:0005745 ! structural cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2013-07-30T04:15:56Z @@ -26727,7 +26730,7 @@ def: "Lymph vessels that are located on either side of the PCV in the posterior synonym: "SIL" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005840 ! intestinal lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2013-07-31T10:44:16Z @@ -26739,7 +26742,7 @@ def: "Digestive duct within the pancreas. The pancreatic duct carries inactive is_a: ZFA:0005162 ! digestive system duct relationship: part_of ZFA:0000140 ! pancreas relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-08-01T02:17:49Z @@ -26749,7 +26752,7 @@ name: intercalated duct pancreas namespace: zebrafish_anatomy def: "The portion of the intrapancreatic duct leading from the pancreatic acinar gland to the intralobular duct." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:44:27Z @@ -26760,7 +26763,7 @@ namespace: zebrafish_anatomy def: "Intrapancreatic duct within a pancreatic lobe that connects all the intercalated duct with an interlobular duct. The intralobular duct is lined with cuboidal cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0005748 ! intrapancreatic duct relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:50:38Z @@ -26779,7 +26782,7 @@ name: main intrapancreatic duct namespace: zebrafish_anatomy def: "Intrapancreatic duct that connects to the interlobular ducts and drains into the extrapancreatic duct. The main duct may not be present in all larva and may develop in a segmented fashion." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3, ZFIN:ZDB-PUB-070310-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:55:07Z @@ -26812,7 +26815,7 @@ namespace: zebrafish_anatomy def: "Portion of tissue composed of a group of cells in the pancreas producing insulin, glucagon and somatostatin. Part of the endocrine pancreas." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001260 ! endocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T04:10:28Z @@ -26823,7 +26826,7 @@ namespace: zebrafish_anatomy def: "Islets that develop after the primary islet. The secondary islets usually form around 7 dpf but can be induced to form as early as 5 dpf." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130710-45, ZFIN:ZDB-PUB-140817-2] comment: Start stage known to be after 3dpf. is_a: ZFA:0005755 ! islet -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2013-08-01T04:10:55Z @@ -26835,9 +26838,9 @@ def: "Portion of tissue composed of the signal-generating cells within the zona synonym: "MDO" EXACT [] synonym: "mid-diencephalic organizer" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001344 ! zona limitans intrathalamica -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-08-02T03:20:09Z @@ -26849,7 +26852,7 @@ def: "Adipose tissue interspersed within the pancreatic acini." [GOC:cvs, ORCiD: comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2013-09-23T10:03:51Z @@ -26862,7 +26865,7 @@ comment: No evidence of septa surrounding fat has been presented so is a fat acc synonym: "visceral fat deposit" RELATED [] is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2013-09-23T10:23:07Z @@ -26874,7 +26877,7 @@ def: "Adipose tissue in the cranium. Cranial adipocytes are located within the v comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T10:26:44Z @@ -26895,7 +26898,7 @@ name: subcutaneous fat namespace: zebrafish_anatomy def: "Adipose tissue between muscle and integument." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111012-7] is_a: ZFA:0005345 ! adipose tissue -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T11:20:54Z @@ -26906,7 +26909,7 @@ namespace: zebrafish_anatomy def: "Adipose tissue surrounding the esophagus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:32:46Z @@ -26918,7 +26921,7 @@ def: "Adipose tissue deposited along the mandible." [GOC:cvs, ORCiD:0000-0002-22 synonym: "jaw fat deposit" EXACT [] is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:33:07Z @@ -26930,7 +26933,7 @@ def: "Adipose tissue surrounding the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917 synonym: "pericardial fat deposit" EXACT [] is_a: ZFA:0005345 ! adipose tissue relationship: part_of ZFA:0000054 ! pericardium -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:41:21Z @@ -26942,7 +26945,7 @@ def: "Adipose tissue that forms at the base of the pectoral fin." [GOC:cvs, ORCi synonym: "pectoral fin plate deposit" EXACT [] is_a: ZFA:0005762 ! subcutaneous fat relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:42:40Z @@ -26954,7 +26957,7 @@ def: "Subcutaneous adipose tissue deposit at the base of the caudal fin." [GOC:c synonym: "tail fin fat" EXACT [] is_a: ZFA:0005762 ! subcutaneous fat relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T12:46:21Z @@ -26963,6 +26966,7 @@ id: ZFA:0005768 name: trigeminal sensory neuron namespace: zebrafish_anatomy def: "Sensory neuron that extends a single axon shaft along the lateral white matter of the hindbrain and spinal cord. Numerous medially projecting branches are later formed and innervate a series of target nuclei along the anteroposterior axis of the hindbrain and spinal cord. The highly branched axons innervate the integument of the head. There are several subtypes with different afferent branching morphologies." [ZFIN:ZDB-PUB-120106-15] +subset: cell_slim is_a: ZFA:0009053 ! sensory neuron created_by: Ceri creation_date: 2013-09-30T03:31:51Z @@ -26977,7 +26981,7 @@ xref: CL:0000018 is_a: ZFA:0009016 ! germ line cell relationship: develops_from ZFA:0009005 ! spermatocyte relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2013-10-04T03:51:27Z @@ -26986,8 +26990,9 @@ id: ZFA:0005770 name: crypt neuron olfactory support cell namespace: zebrafish_anatomy def: "Specialized olfactory support cell that surrounds crypt olfactory sensory neurons. There are one or two support cells for each crypt neuron. The cytoplasm of crypt neuron olfactory support cells is less electron dense then other support cells. They also bear numerous microvilli at their apical rim. When two supporting cells are present, they interdigitate with each other Mitochondria in crypt supporting cells are larger than those in the common supporting cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060724-7] +subset: cell_slim is_a: ZFA:0000688 ! olfactory support cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-11-05T11:05:25Z @@ -26998,8 +27003,8 @@ namespace: zebrafish_anatomy def: "Portion of tissue that develops from the cranial neural crest and which cells populate a series of pharyngeal arches from which develops the support skeleton of the jaw and gills." [ZFIN:ZDB-PUB-110609-14, ZFIN:ZDB-PUB-120517-11] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007087 ! migratory cranial neural crest -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Ceri creation_date: 2013-11-25T12:11:28Z @@ -27011,7 +27016,7 @@ def: "Diploid cell produced by the fusion of sperm cell nucleus and egg cell." [ synonym: "zygote " EXACT [] xref: CL:00000365 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000001 ! zygote:1-cell created_by: Ceri creation_date: 2013-11-25T01:46:49Z @@ -27020,10 +27025,11 @@ id: ZFA:0005773 name: embryonic blood vessel endothelial progenitor cell namespace: zebrafish_anatomy def: "An endothelial progenitor cell that participates in angiogenesis during development." [GOC:tjm] +subset: cell_slim xref: CL:0002546 is_a: ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2013-12-02T02:57:49Z @@ -27034,7 +27040,7 @@ namespace: zebrafish_anatomy def: "The external layer of the atrium bounding the atrial myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100112-31] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005057 ! epicardium -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2013-11-26T04:32:55Z @@ -27043,6 +27049,7 @@ id: ZFA:0005775 name: enteric neuron namespace: zebrafish_anatomy def: "Neuron that is part of the enteric nervous system." [CL:MAH] +subset: cell_slim xref: CL:0007011 is_a: ZFA:0009059 ! autonomic neuron relationship: part_of ZFA:0001155 ! enteric nervous system @@ -27054,6 +27061,7 @@ id: ZFA:0005776 name: parasympathetic neuron namespace: zebrafish_anatomy def: "Parasympathetic neurons are part of the parasympathetic nervous system and the cell bodies lie in the brain and sacral region of the spinal cord. The neurons are mainly cholinergic." [ISBN:0080923437] +subset: cell_slim xref: CL:0011102 is_a: ZFA:0009059 ! autonomic neuron relationship: part_of ZFA:0001575 ! parasympathetic nervous system @@ -27065,6 +27073,7 @@ id: ZFA:0005777 name: sympathetic neuron namespace: zebrafish_anatomy def: "Sympathetic neurons are part of the sympathetic nervous system and are primarily adrenergic producing the neurotransmitter noradrenalin along with other neuropeptides." [ISBN:0080923437] +subset: cell_slim xref: CL:0011103 is_a: ZFA:0009059 ! autonomic neuron relationship: part_of ZFA:0001576 ! sympathetic nervous system @@ -27076,6 +27085,7 @@ id: ZFA:0005778 name: hypocretin-secreting neuron namespace: zebrafish_anatomy def: "A neuron that releases hypocretin as a neurotransmitter." [PMID:23848055] +subset: cell_slim synonym: "orexin secreting neuron " RELATED [] xref: CL:0011109 is_a: ZFA:0009248 ! neuron @@ -27089,7 +27099,7 @@ namespace: zebrafish_anatomy def: "Epithelium within the thymus where lymphocytes mature. Cells of the thymic epithelium have cytoplasm that appear devoid of most membrane bound organelles but contain bundles of cytoplasmic filaments, and frequent desmosomes occur between these epithelial cells. There are also secretory epithelial cells that contain a heterogeneous population of electron-dense, cytoplasmic granules and a well developed Golgi complex. Epithelial cysts are present after 3 weeks." [ZFIN:ZDB-PUB-990414-60] is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0001078 ! thymus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-03-11T03:25:06Z @@ -27099,9 +27109,9 @@ name: immature thymic epithelium namespace: zebrafish_anatomy def: "Epithelium of the thymus primordium composed of cells of immature morphology. The immature thymic epithelium is continuous with the pharyngeal epithelium. The immature thymic epithelium is composed of electron-lucent epithelial cells of irregular or polygonal shape and contain numerous ribosomes, large electron-lucent mitochondria, and rough endoplasmic reticulum. Nascent desmosomes join these primitive epithelial cells together." [ZFIN:ZDB-PUB-990414-60] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001077 ! thymus primordium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2014-03-11T03:28:25Z @@ -27112,7 +27122,7 @@ namespace: zebrafish_anatomy def: "Part of the gut where the pronephric tubules come together with the caudal end of the intestine attaching at 4dpf. The oviduct or sperm duct connect later." [ZFIN:ZDB-PUB-060508-11] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2014-03-12T09:34:37Z @@ -27124,7 +27134,7 @@ def: "The juncture where the intestine empties into the cloaca." [GOC:cvs, ORCi synonym: "gut opening" EXACT [] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0000330 ! cloacal chamber -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-12T09:39:01Z @@ -27136,7 +27146,7 @@ def: "Epithelium lining the cloaca. The epithelium is a simple cuboidal epithel is_a: ZFA:0001486 ! epithelium relationship: part_of ZFA:0005123 ! gut epithelium relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2014-03-12T10:18:40Z @@ -27145,6 +27155,7 @@ id: ZFA:0005784 name: striated muscle cell namespace: zebrafish_anatomy def: "Muscle cell which has as its direct parts myofilaments organized into sarcomeres." [GOC:tfm, ISBN:0721662544] +subset: cell_slim xref: CL:0000737 is_a: ZFA:0009114 ! muscle cell created_by: Ceri @@ -27162,7 +27173,7 @@ relationship: has_developmental_contribution_from ZFA:0000728 ! somite 2 relationship: has_developmental_contribution_from ZFA:0000732 ! somite 3 relationship: has_developmental_contribution_from ZFA:0005923 ! anterior migratory muscle precursor stream relationship: part_of ZFA:0000204 ! esophagus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-03-18T03:37:56Z @@ -27171,10 +27182,11 @@ id: ZFA:0005786 name: cleft cell namespace: zebrafish_anatomy def: "Wedge-shaped epidermal cell positioned along the apex of the developing fin fold. Each cleft cell retains a wedge-shaped form during fold formation and develops a basal cleft-shaped invagination. Invaginations are aligned in neighboring cleft cells so that these cells cap the distal boundary of the subepidermal space where collagenous extracellular fibres called actinotrichia run anteroposteriorly along the length of the fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-195] +subset: cell_slim is_a: ZFA:0009183 ! epidermal cell -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2014-03-25T09:31:29Z @@ -27185,7 +27197,7 @@ namespace: zebrafish_anatomy def: "Artery that runs along the midline from anterior to posterior regions of the hypothalamus and splits into two capillary branches (hyc). The formation of the artery is initiated at the hypophysis itself and extends anteriorly until it connects with the palatocerebral arteries at day 2.5." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111027-47, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0000005 ! artery relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T10:42:12Z @@ -27196,7 +27208,7 @@ namespace: zebrafish_anatomy def: "Vein thats tarts posterior of the hypophysis and drains the hypophyseal capillaries. It empties into the primary head sinus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0000082 ! vein relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T10:47:03Z @@ -27217,7 +27229,7 @@ namespace: zebrafish_anatomy def: "Pair of capillaries that bilaterally encompass the hypophysis starting at the anterior aspect of the hypophysis (pituitary). Directly posterior to the pituitary, the two capillaries fuse with the hypophyseal vein." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0005250 ! capillary relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T11:27:53Z @@ -27228,7 +27240,7 @@ namespace: zebrafish_anatomy def: "Surface structure that is a keratinized epidermal appendages that is a contact organ and secondary sex organ." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-05-15T03:26:12Z @@ -27239,7 +27251,7 @@ namespace: zebrafish_anatomy def: "Surface structure that is a protrusion from the rostral end of the jaw, supported by the mandibular projection." [ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] synonym: "lateral projections lower jaw" EXACT [] is_a: ZFA:0000292 ! surface structure -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:10:53Z @@ -27250,7 +27262,7 @@ namespace: zebrafish_anatomy def: "Layer of smooth cells composing the outer layer of the breeding tubercle. Cells in this layer have a high keratin content, lamellar bodies, and condensed chromosomes. This layer is repeatedly shed and regenerated." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:33:07Z @@ -27261,7 +27273,7 @@ namespace: zebrafish_anatomy def: "Cell layer that lies underneath the superficial layer of the breeding tubercle. Characterized by tight junctions within the layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:46:01Z @@ -27273,7 +27285,7 @@ def: "Intermediate layer of the breeding tubercles characterized by cells with synonym: "spinous keratinocyte layer" EXACT [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:46:51Z @@ -27284,7 +27296,7 @@ namespace: zebrafish_anatomy def: "Layer of breeding tubercle proximal to basal lamina of the integument." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:48:25Z @@ -27296,7 +27308,7 @@ def: "Breeding tubercles along the surface of the pectoral fin lepidotrichium of is_a: ZFA:0005791 ! breeding tubercle relationship: part_of ZFA:0000242 ! male organism relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-04T02:50:54Z @@ -27325,7 +27337,7 @@ namespace: zebrafish_anatomy def: "Portion of organism substance that is located between the cap and second tier layers of the breeding tubercles. The lipid lamellae is composed of lipids." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001487 ! portion of organism substance relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T04:00:53Z @@ -27337,9 +27349,9 @@ def: "The interrenal vessel (IRV) is the blood vessels supplying the interrenal synonym: "IRV" EXACT [] is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0005802 ! interrenal angiogenic sprout -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001345 ! interrenal gland -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-06-06T01:45:08Z @@ -27349,7 +27361,7 @@ name: interrenal angiogenic sprout namespace: zebrafish_anatomy def: "Sprout from the dorsal aorta that develops into the interrenal vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120905-5] is_a: ZFA:0005604 ! angiogenic sprout -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001346 ! interrenal primordium created_by: Ceri creation_date: 2014-06-10T10:26:33Z @@ -27423,9 +27435,9 @@ comment: Appears after cardiac looping ~30hpf. Derived from mesoderm. synonym: "proepicardial organ" EXACT [ZFIN:ZDB-PUB-080218-16] synonym: "proepicardium" EXACT [ZFIN:ZDB-PUB-140603-8] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-28T03:01:42Z @@ -27437,7 +27449,7 @@ def: "Network of heavily branched muscle in the atrium." [GOC:cvs, ORCiD:0000-00 synonym: "pectinate muscles" EXACT PLURAL [] is_a: ZFA:0005280 ! cardiac muscle relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-07-28T04:28:45Z @@ -27449,7 +27461,7 @@ def: "Trabecular layer of the atrial myocardium." [GOC:cvs, ORCiD:0000-0002-2244 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001374 ! atrial myocardium relationship: part_of ZFA:0005059 ! trabecular layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-28T04:35:49Z @@ -27573,7 +27585,7 @@ synonym: "ICV" RELATED [] synonym: "interfilamenti caudalis ventralis" EXACT [] is_a: ZFA:0005277 ! skeletal muscle relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-10-30T10:11:24Z @@ -27586,7 +27598,7 @@ synonym: "ICD" RELATED [] synonym: "interfilamenti caudalis dorsalis " EXACT [] is_a: ZFA:0005277 ! skeletal muscle relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-10-30T10:14:35Z @@ -27633,7 +27645,7 @@ namespace: zebrafish_anatomy def: "Cardiac muscle located in the trabecular layer of the ventricle that is attached to the base of the AV and BV valves. It is similar to the papillary muscle in mammals and birds but, does not attach to the ends of the valve leaflets." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0005280 ! cardiac muscle relationship: part_of ZFA:0005060 ! trabecular layer of ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-02-19T03:45:32Z @@ -27644,7 +27656,7 @@ namespace: zebrafish_anatomy def: "Cardiac muscle located in the trabecular layer of the ventricle that spans the central lumen near the ventricular apex. The transverse muscle band superficially resembles the septomarginal trabecula found in reptilian and mammalian hearts in that it spans the ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0005280 ! cardiac muscle relationship: part_of ZFA:0005060 ! trabecular layer of ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-02-19T03:48:37Z @@ -27681,7 +27693,7 @@ synonym: "haemopoietic cell" RELATED [] synonym: "hemopoietic cell" EXACT [] xref: CL:0000988 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-02-27T09:55:34Z @@ -27707,7 +27719,7 @@ relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0001606 ! pharyngeal arch 3 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-21T04:16:23Z @@ -27722,7 +27734,7 @@ relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0001607 ! pharyngeal arch 4 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-22T10:05:13Z @@ -27737,7 +27749,7 @@ relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0001608 ! pharyngeal arch 5 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-22T10:06:52Z @@ -27752,7 +27764,7 @@ relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0001610 ! pharyngeal arch 7 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-04-22T10:18:37Z @@ -27764,9 +27776,9 @@ def: "Lymphangiogenic sprout that originates from the common cardinal vein and comment: Although a facial lymphatic vessel has previously been described using lymphangiography in 5-week-old zebrafish (Yaniv et al., 2006), we are not sure whether\nthis previously described vessel is connected to, or derived from, the FL network that we have identified (ZDB-PUB-120529-43). synonym: "FLS" EXACT [] is_a: ZFA:0005603 ! lymphangiogenic sprout -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2015-04-22T12:15:12Z @@ -27780,7 +27792,7 @@ synonym: "LFL" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005836 ! facial lymphatic sprout relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-04-22T12:41:36Z @@ -27793,7 +27805,7 @@ synonym: "otolithic lymphatic vessel" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-04-22T02:06:44Z @@ -27807,7 +27819,7 @@ synonym: "MFL " EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-23T01:49:47Z @@ -27819,7 +27831,7 @@ def: "Lymph vasculature surrounding the intestines." [GOC:cvs, ORCID:0000-0002-2 synonym: "" RELATED [] synonym: "intestinal lymphatics" EXACT [] is_a: ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-30T11:15:28Z @@ -27831,7 +27843,7 @@ def: "Lymph vessel that follows the supraintestinal artery." [GOC:CVS, ORCID:000 synonym: "UR-IL" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005843 ! right intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:25:27Z @@ -27843,7 +27855,7 @@ def: "Pair of lymph vessel that follows the right subintestinal vein. At 6 dpf, synonym: "LR-IL" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005843 ! right intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:28:11Z @@ -27875,7 +27887,7 @@ synonym: "LL-IL" EXACT [] synonym: "lower left intestinal lymphatic" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005846 ! left intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:49:08Z @@ -27896,7 +27908,7 @@ def: "Lymph vessel on the left of the intestine that runs parallel to the upper synonym: "UL-IL" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005846 ! left intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T12:28:46Z @@ -27907,7 +27919,7 @@ namespace: zebrafish_anatomy def: "Lymph vessel that connects lymph vessels within the intestinal lymphatic network." [GOC:cvs, ORCID:0000-0002-2244-7917] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005840 ! intestinal lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T01:40:05Z @@ -27917,7 +27929,7 @@ name: ceratobranchial 5 replacement tooth namespace: zebrafish_anatomy def: "Is a multi-tissue structure composed of dentine, enameloid and tooth pulp that develops from the dental organ. These structures successively replace the primary ceratobranchial teeth." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-001208-4] is_a: ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth creation_date: 2015-06-19T12:48:15Z [Term] @@ -27939,7 +27951,7 @@ name: ceratobranchial 5 primary tooth namespace: zebrafish_anatomy def: "Is a multi-tissue structure composed of dentine, enameloid and tooth pulp that develops from the dental organ. These are the first teeth to develop." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-020820-10] is_a: ZFA:0000694 ! ceratobranchial 5 tooth -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-07-01T04:53:58Z @@ -27960,7 +27972,7 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 5V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-07-02T09:04:21Z @@ -27971,7 +27983,7 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 3V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-07-02T09:05:23Z @@ -28011,7 +28023,7 @@ namespace: zebrafish_anatomy def: "Capillaries that branch from the hyaloid artery and drain into the hyaloid vein. The hyaloid capillaries are located behind the lens and may be transient." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-150419-5] is_a: ZFA:0005046 ! hyaloid vessel is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2015-08-17T04:43:51Z @@ -28048,7 +28060,7 @@ name: ovarian lymph vessel namespace: zebrafish_anatomy def: "Lymph vessels within the ovary. These vessels are located in the interstitium between ovarian follicles and appear to envelop arterioles." [GOC:CVS, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-130218-10] is_a: ZFA:0005844 ! lymph vessel -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2015-10-28T12:00:39Z @@ -28070,7 +28082,7 @@ namespace: zebrafish_anatomy def: "Portion of optic tract that innervates the optic tectum." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1095, ZFIN:ZDB-PUB-961014-148] is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000252 ! optic tract -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2016-01-11T03:48:45Z @@ -28079,6 +28091,7 @@ id: ZFA:0005865 name: reticulospinal neuron namespace: zebrafish_anatomy def: "Neuron with the large soma in the brain with an axon projecting caudally to the spinal cord." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-594] +subset: cell_slim is_a: ZFA:0009191 ! CNS interneuron created_by: Ceri creation_date: 2016-01-12T10:33:08Z @@ -28088,6 +28101,7 @@ id: ZFA:0005866 name: vestibulospinal neuron namespace: zebrafish_anatomy def: "CNS interneuron with a soma located in a cluster in the lateral wall of the medulla, with dendrites confined to the neuropil, that has connections to the vestibular and lateral line neurons." [ZFIN:ZDB-PUB-961014-572] +subset: cell_slim synonym: "V" RELATED [] is_a: ZFA:0009191 ! CNS interneuron created_by: Ceri @@ -28101,7 +28115,7 @@ def: "Mesoderm part of the head." [GOC:cvs, ORCiD:0000-0002-2244-7917\,] is_a: ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0000414 ! presumptive cephalic mesoderm relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2016-01-14T02:01:33Z @@ -28112,9 +28126,9 @@ namespace: zebrafish_anatomy def: "Rostral cell mass bordering the pretectum. The cells are stained with the gene nurod and are Hu positive. The region is named for its presumed homology to the avian griseum tectale." [ZFIN:ZDB-PUB-070711-1] synonym: "tectal grey " EXACT [] is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2016-01-22T12:54:41Z @@ -28124,9 +28138,9 @@ name: cerebellar plate namespace: zebrafish_anatomy def: "Multi-tissue structure that is made up of the external granular layer and the ventral proliferative layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2016-02-02T11:33:30Z @@ -28136,9 +28150,9 @@ name: cerebellar plate ventral proliferative layer namespace: zebrafish_anatomy def: "Proliferative zone on the ventral side of the cerebellar plate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005869 ! cerebellar plate -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2016-02-02T11:45:44Z @@ -28148,9 +28162,9 @@ name: region of the nucleus of the medial longitudinal fascicle namespace: zebrafish_anatomy def: "Portion of tissue in the midbrain that will develop into the nucleus of the medial longitudinal fasciculus synencephalon." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2016-02-02T11:47:50Z @@ -28161,9 +28175,9 @@ def: "Proliferative region that forms on peripheral side of the cerebellar plate synonym: "cerebellar plate peripheral proliferative zone" RELATED [] synonym: "EGL" EXACT [] is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005869 ! cerebellar plate -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2016-02-02T11:50:39Z @@ -28184,6 +28198,7 @@ id: ZFA:0005874 name: spiral neuron namespace: zebrafish_anatomy def: "Spiral neurons are excitatory interneurons located in rhombomere 3 and have contralateral projections that cross the midline forming commissures in rhombomere 3. After crossing the midline the two commissures fuse and project caudally synapsing with the Mauthner neuron. As they enter the axon cap, spiral fiber neurons lose their myelin and wrap around the axon hillock in a stereotyped spiral, where they make both electrical and glutamatergic synapses on the M cell axon close to the M-cell soma and with one another. Spiral neurons produced biphasic excitatory postsynaptic potentials (EPSPs) in the contralateral M-cell with a short latency." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010711-2, ZFIN:ZDB-PUB-110110-13, ZFIN:ZDB-PUB-150512-4] +subset: cell_slim is_a: ZFA:0005209 ! hindbrain interneuron relationship: part_of ZFA:0000948 ! rhombomere 3 created_by: Ceri @@ -28199,7 +28214,7 @@ synonym: " TCPT" EXACT [ZFIN:ZDB-PUB-961014-1268] synonym: "tract of the commissure of the posterior tuberculum" EXACT [] is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000491 ! commissure of the caudal tuberculum -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2016-06-07T10:08:17Z @@ -28210,7 +28225,7 @@ namespace: zebrafish_anatomy def: "The space between the cornea and lens in the anterior segment of the eye where the aqueous humor is located." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-10-13T15:42:03Z @@ -28221,7 +28236,7 @@ namespace: zebrafish_anatomy def: "Commissure that is formed by a subset of TCPT axons that cross the midline in the diencephalon. The TCPTc does not appear to cross with other commissures. The initial crossing of the TCPTc occurs at approximately 36 hpf." [GOC:cvs, GOC:dsf, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120419-3.] synonym: "Commissure of the TCPT" EXACT [] is_a: ZFA:0000338 ! diencephalic white matter -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2016-10-18T10:07:14Z @@ -28230,6 +28245,7 @@ id: ZFA:0005878 name: oogonia namespace: zebrafish_anatomy def: "An undifferentiated germ cell that proliferates rapidly and gives rise to oocytes. In zebrafish oogonia are round cells, with centrally located nucleoli, which are strongly basophilic. Oogonia in larva zebrafish fish are often found in clusters of two or four cells, corresponding to the second, or third oogonial divisions, presumably arising from mitotic divisions of primordial germ cells." [GOC:cvs, GOC:tfm, ISBN:0721662544, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120718-30] +subset: cell_slim xref: CL:0000024 is_a: ZFA:0009016 ! germ line cell relationship: part_of ZFA:0000413 ! gonad @@ -28265,7 +28281,7 @@ namespace: zebrafish_anatomy def: "The membranous sheath that surrounding the seminiferous tubule." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:44:18Z @@ -28276,7 +28292,7 @@ namespace: zebrafish_anatomy def: "Structure in the testis formed by cytoplasmic projections of one or two Sertoli cells that surround a single spermatogonium. Sperm production occurs with in the cyst and the spermatogonium divides to generate approximately 1300 mature sperm. A given Sertoli cell is in contact with only one germ cell clone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:48:48Z @@ -28287,7 +28303,7 @@ namespace: zebrafish_anatomy def: "Membranous sheath that surrounds the testis." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:51:24Z @@ -28298,7 +28314,7 @@ namespace: zebrafish_anatomy def: "Lumen of the seminiferous tubule. Mature sperm is stored in the tubular lumen." [GOC:cvs, https://en.wikibooks.org/wiki/The_Zebrafish_in_Toxicology/Spermatogenesis, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2017-05-16T13:18:07Z @@ -28308,8 +28324,8 @@ name: operculohyoid ligament namespace: zebrafish_anatomy def: "Ligament that connects the anterior apex of the opercle to the posterior end of the ceratohyal. The ligament extends orthogonal and anterior to the opercle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-161030-16] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec creation_date: 2017-06-12T13:27:26Z [Term] @@ -28319,9 +28335,9 @@ namespace: zebrafish_anatomy def: "Cartilage that attaches the parachordal cartilage to the auditory capsule anterior to the basicapsular fenestra. The anterior basicapsular commissure are paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "anterior basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2017-10-20T11:38:57Z @@ -28332,9 +28348,9 @@ namespace: zebrafish_anatomy def: "Cartilage that attaches the parachordal cartilage to the auditory capsule posterior of the basicapsular fenestra. The posterior basicapsular commissure are paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "posterior basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2017-10-20T11:42:11Z @@ -28346,9 +28362,9 @@ def: "Cartilage that grows from the auditory capsule medially toward the anterio synonym: " lateral basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] synonym: "lateral commissure " RELATED [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2017-10-20T11:51:14Z @@ -28416,7 +28432,7 @@ namespace: zebrafish_anatomy def: "Chamber in the prootic where the trunks of the trigeminal facial nerve complex pass from the brain to the outside of the cranium. In the adult, a posteromedial extension from the prootic delimits the medial boundary of the trigeminal-facial chamber. The anterior opening of the trigeminal-facial chamber lies between the prootic and the pterosphenoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "trigeminofacialis chamber" EXACT [] is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-27T16:53:59Z @@ -28451,9 +28467,9 @@ namespace: zebrafish_anatomy def: "Tissue that lies between the caudal artery and the caudal vein plexus where definitive hematopoiesis occurs after 48hpf and before the hematopoietic progenitors migrate to the thymus and kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-061227-29, ZFIN:ZDB-PUB-070303-37] synonym: "posterior blood island" RELATED [ZFIN:ZDB-PUB-070303-37] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2018-02-21T12:40:50Z @@ -28464,7 +28480,7 @@ namespace: zebrafish_anatomy def: "The initial growth point of the scale. In zebrafish the focus is on the anterior edge of the scale." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180311-2] is_a: ZFA:0000037 ! anatomical structure relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-08-30T16:47:45Z @@ -28476,7 +28492,7 @@ def: "Grooves on the scale radiating from the focus. Zebrafish have primary radi synonym: "scale radii" EXACT PLURAL [] is_a: ZFA:0001690 ! groove relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-08-30T16:50:48Z @@ -28487,9 +28503,9 @@ namespace: zebrafish_anatomy def: "Transient groove in the dorsal eye lined by basal lamina. The groove extends across the dorsal retina to partially separate the nasal and temporal retinal lobes. The sulcus forms soon after optic cup formation and as the eye develops it becomes broader and shallower until it is undetectable." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180310-10] synonym: "dorsal ocular sulcus" EXACT [] is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Ceri creation_date: 2018-09-05T16:23:34Z @@ -28500,9 +28516,9 @@ namespace: zebrafish_anatomy def: "A medial cartilaginous spur that develops from the dorsomedial edge of the palatoquadrate. It is derived from cells located in the maxillary prominence of the first pharyngeal arch and gives rise to the metapterygoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100726-23, ZFIN:ZDB-PUB-961014-192] synonym: "Ptp" RELATED [] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001399 ! palatoquadrate cartilage -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2018-09-12T09:53:49Z @@ -28521,7 +28537,7 @@ name: retroarticular process namespace: zebrafish_anatomy def: "A protrusion of cartilage at the posteroventral tip of Meckel's cartilage that gives rise to the retroarticular." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-161203-3] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0001205 ! Meckel's cartilage created_by: Ceri creation_date: 2018-09-12T10:37:59Z @@ -28533,7 +28549,7 @@ namespace: zebrafish_anatomy def: "Cartilaginous protrusion on the posterodorsal region of Meckel's cartilage. The coronoid process of Meckel's cartilage forms the dorsal portion of the articulation with the anteroventral corner of the palatoquadrate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060724-1, ZFIN:ZDB-PUB-161203-3] synonym: " coronoid process of Meckel's cartilage" EXACT [] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001205 ! Meckel's cartilage created_by: Ceri creation_date: 2018-09-12T14:26:48Z @@ -28544,9 +28560,9 @@ name: Reissner's fiber namespace: zebrafish_anatomy def: "Thread-like fibrous aggregation of secreted molecules extending from the subcommissural organ (SCO) through the ventricular system and central canal to the end of the spinal cord." [GOC:cvs, ISBN:978-0471888895, ZFIN:ZDB-PUB-980205-16] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000938 ! central canal -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2018-11-29T11:06:47Z @@ -28559,7 +28575,7 @@ synonym: "synaptic neuropil " RELATED [ZFIN:ZDB-PUB-101101-16] synonym: "tectial lamina" RELATED [ZFIN:ZDB-PUB-081218-37] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2019-01-28T17:08:19Z @@ -28570,8 +28586,8 @@ namespace: zebrafish_anatomy def: "Region the larval brain that is a forerunner of the adult central and superficial pretectal regions. This region is non ventricular neural proliferation zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-030115-8, ZFIN:ZDB-PUB-990406-3] synonym: "M1" EXACT [ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2019-01-29T16:22:51Z @@ -28584,8 +28600,8 @@ synonym: "early migrated posterior tubercular region" RELATED [ZFIN:ZDB-PUB-0707 synonym: "M2" RELATED [ZFIN:ZDB-PUB-070711-1] synonym: "preglomerular anlagen " RELATED [ZFIN:ZDB-PUB-020912-2] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2019-01-29T16:37:24Z @@ -28596,8 +28612,8 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is presumed to give rise to the entopenduncular nucleus." [ZFIN:ZDB-PUB-040304-8, ZFIN:ZDB-PUB-090914-27] synonym: "M3" NARROW [] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2019-01-30T13:02:59Z @@ -28609,8 +28625,8 @@ def: "Portion of tissue that gives rise to the lateral nucleus of the ventral te synonym: "lateral nucleus of area ventralis telencepha" RELATED [ZFIN:ZDB-PUB-090814-14] synonym: "M4" RELATED [ZFIN:ZDB-PUB-090814-14] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2019-01-30T13:42:52Z @@ -28622,7 +28638,7 @@ def: "Pouch at the end of the endolymphatic duct that helps regulates pressure o xref: TAO:0002194 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown creation_date: 2019-04-16T14:25:54Z [Term] @@ -28642,7 +28658,7 @@ synonym: "argenta " EXACT PLURAL [] synonym: "iridophore layer iris" EXACT [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2019-05-29T15:43:36Z @@ -28653,7 +28669,7 @@ namespace: zebrafish_anatomy def: "Layer of melanophores that are positioned behind the argenta. The melanophore layer absorbs unfocused light preventing it from reaching the retina." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180822-3] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2019-05-29T15:55:27Z @@ -28665,7 +28681,7 @@ def: "Iridophore layer that forms along the dorsal region of the poster segment synonym: "tapetum cellulosum" RELATED [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2019-05-29T16:15:09Z @@ -28698,7 +28714,7 @@ synonym: "perpendicular posterior lateral line neuromast" EXACT [ZFIN:ZDB-PUB-04 is_a: ZFA:0000940 ! posterior lateral line neuromast is_a: ZFA:0005918 ! dorsal-ventral polarized neuromast relationship: develops_from ZFA:0005116 ! secondary posterior lateral line primordium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: ceriv creation_date: 2020-06-18T10:46:54Z @@ -28723,7 +28739,7 @@ subset: cell_slim synonym: "migratory mesenchymal precursor " EXACT [ZFIN:ZDB-PUB-001205-1] synonym: "MMP" RELATED [] is_a: ZFA:0009291 ! muscle precursor cell -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites creation_date: 2020-07-01T10:51:34Z [Term] @@ -28732,8 +28748,8 @@ name: migratory muscle precursor stream namespace: zebrafish_anatomy def: "Groups of migratory muscle precursor that migrate from a conserved origination in concerted manner along stereotyped path." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: ceriv creation_date: 2020-07-01T11:06:26Z @@ -28744,7 +28760,7 @@ namespace: zebrafish_anatomy def: "Muscle precursor stream that originates from the ventral regions of somites 1-3 and migrates anterior of the pectoral fin bud. Migratory muscle precursor from this stream form the esophageal striated muscle and sternohyoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-130709-61] synonym: "first migratory stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:10:27Z @@ -28755,7 +28771,7 @@ namespace: zebrafish_anatomy def: "Muscle precursor stream that originates from the ventral regions of somites 2-4 and migrates toward the pectoral fin bud. Migratory muscle precursors from this stream contribute to the pectoral fin musculature and make a small contribution to the posterior hypaxial muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-190808-2] synonym: "middle migratory muscle precursor stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:14:03Z @@ -28766,7 +28782,7 @@ namespace: zebrafish_anatomy def: "Migratory muscle precursor stream that originates from the ventral regions of somites 5-7 that migrates posterior to the pectoral fin bud. Migratory muscle precursors from this stream form the posterior hypaxial muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-190427-4] synonym: "third migratory stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:17:29Z @@ -28780,10 +28796,10 @@ synonym: "inferior obliquus muscle" BROAD [ZFIN:ZDB-PUB-020913-1] synonym: "PHM" RELATED [] synonym: "ventral-most hypaxial muscle " EXACT [ZFIN:ZDB-PUB-010924-1] is_a: ZFA:0000362 ! hypaxialis -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: has_developmental_contribution_from ZFA:0005924 ! middle migratory muscle precursor stream relationship: has_developmental_contribution_from ZFA:0005925 ! posterior migratory muscle precursor stream -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: ceriv creation_date: 2020-07-01T11:21:03Z @@ -28793,7 +28809,7 @@ name: endothelial blood brain barrier namespace: zebrafish_anatomy def: "Blood vessel endothelium that restricts the passage of circulating substances from the blood to the brain parenchyma while actively facilitating the passage of nutrients and removal of waste products. The developing blood brain barrier undergoes a period of transcytosis and leaks that decrease as the mature form is established. The barrier matures in a posterior to anterior direction." [GOC:cvs, ORCID:000-0002-2244-7917, ZFIN:ZDB-PUB-190821-6] is_a: ZFA:0005259 ! continuous blood vessel endothelium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth creation_date: 2020-07-30T10:25:52Z [Term] @@ -28824,7 +28840,7 @@ name: lumen namespace: zebrafish_anatomy def: "Anatomical space within a tubular organ, duct, or vessel." [GOC:cvs, https:en.org/wiki/Lumen_(anatomy), ORCID:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown creation_date: 2020-11-20T13:39:11Z [Term] @@ -28842,7 +28858,7 @@ name: developmental vascular plexus namespace: zebrafish_anatomy def: "Transient plexus formed by vasculogenesis that results in the formation of an intermediate network of similar sized vessels with polygonal-shaped avascular spaces. As the vasculature matures it is remodeled into a hierarchical vascular tree." [GOC:cvs, ORCID:0000-0002-2244-7917, PMID:23799579, ZFIN:ZDB-PUB-150418-3] is_a: ZFA:0005931 ! vascular plexus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-11-20T14:29:48Z @@ -28864,7 +28880,7 @@ namespace: zebrafish_anatomy def: "Non stereotyped venous plexus derived from specialised angioblast that originate in the floor of the posterior cardinal vein. Emerges from the duct of Cuvier at 2dpf as a reticular structure that spreads bilaterally over the surface of the yolk and gut." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-150418-3, ZFIN:ZDB-PUB-151021-20, ZFIN:ZDB-PUB-151104-9] synonym: "subintestinal plexus" EXACT [] is_a: ZFA:0005931 ! vascular plexus -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T14:35:56Z @@ -28876,7 +28892,7 @@ def: "Subintestinal venous plexus that wraps the yolk. Anterior vessels connecte synonym: "yolk plexus" RELATED [] is_a: ZFA:0005932 ! developmental vascular plexus is_a: ZFA:0005934 ! subintestinal venous plexus -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 created_by: ceriv creation_date: 2020-11-20T14:41:40Z @@ -28887,7 +28903,7 @@ namespace: zebrafish_anatomy def: "Plexus that wraps the anterior digestive system. These vessels form the permanent, superficial vessels of the digestive system. The left subintestinal vein regresses and empties into the right subintestinal vein." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-151021-20] is_a: ZFA:0005933 ! mature plexus is_a: ZFA:0005934 ! subintestinal venous plexus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: ceriv creation_date: 2020-11-20T14:43:36Z @@ -28898,9 +28914,9 @@ namespace: zebrafish_anatomy def: "Vessels that form connections between the sub intestinal vein and the supraintestinal artery. There are fewer ICVs on the right side of the fish due to the asymmetrical development of the subintestinal veins." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-151104-9] synonym: "ICV" RELATED [] is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005934 ! subintestinal venous plexus -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T15:14:22Z @@ -28943,12 +28959,21 @@ creation_date: 2021-01-27T10:38:07Z id: ZFA:0005942 name: lysosome-rich enterocyte namespace: zebrafish_anatomy -def: "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes ." [GOC:cvs, ORCID:0000-0002-1009-339X, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190903-3] +def: "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes ." [GOC:cvs, ORCID:0000-0002-1009-339X, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190903-3] subset: cell_slim is_a: ZFA:0009269 ! enterocyte created_by: ceriv creation_date: 2021-01-27T10:44:40Z +[Term] +id: ZFA:0005943 +name: perivitelline fluid +namespace: zebrafish_anatomy +def: "Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance." [ZFIN:ZDB-PUB-200910-2] +is_a: ZFA:0000020 ! extraembryonic structure +created_by: ceriv +creation_date: 2021-03-25T15:52:05Z + [Term] id: ZFA:0005944 name: mural cell @@ -28958,10 +28983,152 @@ subset: cell_slim xref: CL:0008034 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: ceriv creation_date: 2021-01-27T11:37:04Z +[Term] +id: ZFA:0005945 +name: long double cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "red-sensitive cone cell" EXACT [ZFIN:ZDB-PUB-990520-1] +synonym: "unequal double cone cell" RELATED [ZFIN:ZDB-PUB-961014-677] +is_a: ZFA:0009262 ! retinal cone cell +relationship: start ZFS:0000033 ! hatching:long-pec +creation_date: 2021-07-09T09:06:25Z + +[Term] +id: ZFA:0005946 +name: short double cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "green-sensitive cone" EXACT [ZFIN:ZDB-PUB-990520-1] +synonym: "unequal double cone cell" RELATED [ZFIN:ZDB-PUB-961014-677] +is_a: ZFA:0009262 ! retinal cone cell +relationship: start ZFS:0000033 ! hatching:long-pec +created_by: ceriv +creation_date: 2021-07-09T10:53:10Z + +[Term] +id: ZFA:0005947 +name: long single cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "blue-sensitive cone cell" EXACT [ZFIN:ZDB-PUB-990520-1] +is_a: ZFA:0009262 ! retinal cone cell +created_by: ceriv +creation_date: 2021-07-09T11:01:04Z + +[Term] +id: ZFA:0005948 +name: short single cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "ultraviolet-sensitive cone" EXACT [] +synonym: "UV-sensitive cone" EXACT [ZFIN:ZDB-PUB-990520-1] +is_a: ZFA:0009262 ! retinal cone cell +created_by: ceriv +creation_date: 2021-07-09T11:10:25Z + +[Term] +id: ZFA:0005949 +name: heart lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the heart." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0005844 ! lymph vessel +relationship: part_of ZFA:0005952 ! heart lymphatic system +relationship: start ZFS:0000041 ! larval:days 21-29 +creation_date: 2021-08-13T11:47:35Z + +[Term] +id: ZFA:0005950 +name: bulbus arteriosus lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +synonym: "outflow tract lymph vessel" EXACT [] +is_a: ZFA:0005949 ! heart lymph vessel +relationship: part_of ZFA:0000173 ! bulbus arteriosus +created_by: ceriv +creation_date: 2021-08-13T11:53:55Z + +[Term] +id: ZFA:0005951 +name: cardiac ventricle lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0005949 ! heart lymph vessel +relationship: part_of ZFA:0000009 ! cardiac ventricle +relationship: start ZFS:0000043 ! juvenile:days 45-89 +created_by: ceriv +creation_date: 2021-08-13T11:58:24Z + +[Term] +id: ZFA:0005952 +name: heart lymphatic system +namespace: zebrafish_anatomy +def: "Lymphatic system of the heart." [GOC:CVS, ORCID:0000-0002-2244-7917] +is_a: ZFA:0005811 ! heart vasculature +created_by: ceriv +creation_date: 2021-08-13T12:23:44Z + +[Term] +id: ZFA:0005953 +name: coronary capillary plexus +namespace: zebrafish_anatomy +def: "Capillary plexus that is located in the heart." [GOC:cvs, ORCID:0000-0002-2244-7917] +is_a: ZFA:0005811 ! heart vasculature +created_by: ceriv +creation_date: 2021-08-13T12:26:17Z + +[Term] +id: ZFA:0005954 +name: cardiac lymphatic endothelial cluster +namespace: zebrafish_anatomy +def: "Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +synonym: "isolated lymph endothelial cells" EXACT [] +is_a: ZFA:0005955 ! lymphatic endothelial cluster +relationship: part_of ZFA:0005952 ! heart lymphatic system +relationship: start ZFS:0000043 ! juvenile:days 45-89 +created_by: ceriv +creation_date: 2021-08-13T12:30:04Z + +[Term] +id: ZFA:0005955 +name: lymphatic endothelial cluster +namespace: zebrafish_anatomy +def: "Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0000385 ! lymphatic system +created_by: ceriv +creation_date: 2021-08-13T12:53:02Z + +[Term] +id: ZFA:0005956 +name: germline stem cell +namespace: zebrafish_anatomy +def: "A stem cell that can give rise to cell types of the germ-line." [ORCID:0000-0002-4142-7153] +subset: cell_slim +xref: CL:0000014 +is_a: ZFA:0005957 ! stem cell +created_by: ceriv +creation_date: 2021-08-13T13:44:39Z + +[Term] +id: ZFA:0005957 +name: stem cell +namespace: zebrafish_anatomy +def: "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells." [GOC:tfm] +subset: cell_slim +xref: CL:0000034 +is_a: ZFA:0009000 ! cell +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T13:47:16Z + [Term] id: ZFA:0006000 name: intermediate hypothalamus @@ -28970,9 +29137,9 @@ def: "Brain structure that lies perpendicular to the longitudinal axis of the em synonym: "Hi" EXACT [] xref: TAO:0006000 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: giles creation_date: 2009-03-26T02:23:30Z @@ -28986,7 +29153,7 @@ xref: TAO:0007000 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula relationship: part_of ZFA:0000428 ! saccule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007001 @@ -28998,9 +29165,9 @@ synonym: "dorsorostral cluster" EXACT [] synonym: "drc" EXACT [] xref: TAO:0007001 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0007002 @@ -29012,9 +29179,9 @@ synonym: "ventrorostral cluster" EXACT [] synonym: "vrc" EXACT [] xref: TAO:0007002 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007003 @@ -29026,9 +29193,9 @@ synonym: "ventral caudal cluster" EXACT [] synonym: "ventrocaudal cluster" EXACT [] xref: TAO:0007003 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007004 @@ -29038,9 +29205,9 @@ def: "Early-developing neuronal cluster of the epiphysis. By 24 hpf the pioneer synonym: "ec" EXACT [] xref: TAO:0007004 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000019 ! epiphysis -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007005 @@ -29063,7 +29230,7 @@ synonym: "lips" EXACT PLURAL [] xref: TAO:0007006 is_a: ZFA:0000292 ! surface structure relationship: part_of ZFA:0000547 ! mouth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007008 @@ -29075,7 +29242,7 @@ synonym: "ventral intermandibulari anterior" EXACT PLURAL [] xref: TAO:0007008 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007009 @@ -29086,7 +29253,7 @@ synonym: "nerves" EXACT PLURAL [] xref: TAO:0007009 is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007010 @@ -29119,7 +29286,7 @@ synonym: "lateral forebrain bundles" EXACT PLURAL [] xref: TAO:0007012 is_a: ZFA:0001682 ! white matter relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007013 @@ -29129,7 +29296,7 @@ def: "Non neural ectoderm that surrounds the presumptive neural plate and gives synonym: "panplacodal ectoderm" EXACT [ZFIN:ZDB-PUB-070122-31] xref: TAO:0007013 is_a: ZFA:0001178 ! non neural ectoderm -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007014 @@ -29138,9 +29305,9 @@ namespace: zebrafish_anatomy def: "Rostral portion of embryonic tissue that gives rise to the anterior neural plate." [GOC:mh, GOC:ymb, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-9900-7880] xref: TAO:0007014 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0007015 @@ -29149,9 +29316,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of embryonic tissue that gives rise to the posterior neural plate." [GOC:mh, GOC:ymb, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-9900-7880] xref: TAO:0007015 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0007016 @@ -29161,9 +29328,9 @@ def: "Rostral portion of the neural plate. Develops into the anterior neural ke xref: TAO:0007016 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007014 ! anterior presumptive neural plate -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0007017 @@ -29173,9 +29340,9 @@ def: "Posterior portion of the neural plate that gives rise to the posterior ne xref: TAO:0007017 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007015 ! posterior presumptive neural plate -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007018 @@ -29185,9 +29352,9 @@ def: "Anterior portion of anterior neural plate that gives rise to the forebrain xref: TAO:0007018 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000062 ! presumptive forebrain -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007019 @@ -29197,9 +29364,9 @@ def: "Portion of neural plate that gives rise to the midbrain neural keel." [GO xref: TAO:0007019 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000148 ! presumptive midbrain -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007020 @@ -29210,9 +29377,9 @@ synonym: "diencephalic-mesencephalic boundary neural plate" EXACT [] xref: TAO:0007020 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001368 ! presumptive forebrain midbrain boundary -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007021 @@ -29222,9 +29389,9 @@ def: "Portion of the posterior neural plate that gives rise to the spinal cord n xref: TAO:0007021 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000417 ! presumptive spinal cord -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007022 @@ -29234,9 +29401,9 @@ def: "Portion of posterior neural plate that gives rise to the hindbrain neural xref: TAO:0007022 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000569 ! presumptive hindbrain -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007023 @@ -29246,9 +29413,9 @@ def: "Posterior portion of the neural keel that gives rise to the posterior neur xref: TAO:0007023 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007017 ! posterior neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007024 @@ -29258,9 +29425,9 @@ def: "Rostral portion of the neural keel. Develops into the anterior neural rod xref: TAO:0007024 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007016 ! anterior neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007025 @@ -29270,9 +29437,9 @@ def: "Portion of neural keel that gives rise to the midbrain neural rod." [GOC: xref: TAO:0007025 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007019 ! midbrain neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007026 @@ -29282,9 +29449,9 @@ def: "Anterior portion of anterior neural keel that gives rise to the forebrain xref: TAO:0007026 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007018 ! forebrain neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007027 @@ -29295,9 +29462,9 @@ synonym: "diencephalic-mesencephalic boundary neural keel" EXACT [] xref: TAO:0007027 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007020 ! forebrain midbrain boundary neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007028 @@ -29306,9 +29473,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural keel that gives rise to the spinal cord neural rod." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007028 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007029 @@ -29318,9 +29485,9 @@ def: "Portion of posterior neural keel that gives rise to the hindbrain neural r xref: TAO:0007029 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007022 ! hindbrain neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007030 @@ -29330,9 +29497,9 @@ def: "Posterior portion of the neural rod that gives rise to the posterior neura xref: TAO:0007030 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007023 ! posterior neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007031 @@ -29342,9 +29509,9 @@ def: "Rostral portion of the neural rod. Develops into the anterior neural tube xref: TAO:0007031 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007024 ! anterior neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007032 @@ -29354,9 +29521,9 @@ def: "Portion of neural rod that gives rise to the midbrain neural tube." [GOC xref: TAO:0007032 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007025 ! midbrain neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007033 @@ -29367,9 +29534,9 @@ synonym: "diencephalic-mesencephalic boundary neural rod" EXACT [] xref: TAO:0007033 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007027 ! forebrain midbrain boundary neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007034 @@ -29379,9 +29546,9 @@ def: "Anterior portion of anterior neural rod that gives rise to the forebrain n xref: TAO:0007034 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007026 ! forebrain neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007035 @@ -29390,9 +29557,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural rod that gives rise to the spinal cord neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007035 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007036 @@ -29402,9 +29569,9 @@ def: "Portion of posterior neural rod that gives rise to the hindbrain neural tu xref: TAO:0007036 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007029 ! hindbrain neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007037 @@ -29414,9 +29581,9 @@ def: "Posterior portion of the neural tube that gives rise to the hindbrain and xref: TAO:0007037 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007030 ! posterior neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007038 @@ -29426,9 +29593,9 @@ def: "Rostral portion of the neural tube." [GOC:mh, GOC:ymb, ORCiD:0000-0001-911 xref: TAO:0007038 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007031 ! anterior neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007039 @@ -29438,9 +29605,9 @@ def: "Portion of neural tube that gives rise to the midbrain." [GOC:mh, GOC:ymb xref: TAO:0007039 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007032 ! midbrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007040 @@ -29451,9 +29618,9 @@ synonym: "diencephalic-mesencephalic boundary neural tube" EXACT [] xref: TAO:0007040 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007033 ! forebrain midbrain boundary neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007041 @@ -29463,9 +29630,9 @@ def: "Anterior portion of anterior neural rod that gives rise to the forebrain." xref: TAO:0007041 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007034 ! forebrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007042 @@ -29474,9 +29641,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural tube that gives rise to the spinal cord." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007042 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007043 @@ -29486,9 +29653,9 @@ def: "Portion of posterior neural tube that gives rise to the hindbrain." [GOC:m xref: TAO:0007043 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007036 ! hindbrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007044 @@ -29499,9 +29666,9 @@ synonym: "midbrain-hindbrain boundary neural plate" EXACT [] xref: TAO:0007044 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001187 ! presumptive midbrain hindbrain boundary -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007045 @@ -29512,9 +29679,9 @@ synonym: "midbrain-hindbrain boundary neural keel" EXACT [] xref: TAO:0007045 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007044 ! midbrain hindbrain boundary neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007046 @@ -29525,9 +29692,9 @@ synonym: "midbrain-hindbrain boundary neural rod" EXACT [] xref: TAO:0007046 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007045 ! midbrain hindbrain boundary neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007047 @@ -29538,9 +29705,9 @@ synonym: "midbrain-hindbrain boundary neural tube" EXACT [] xref: TAO:0007047 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007046 ! midbrain hindbrain boundary neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007048 @@ -29552,7 +29719,7 @@ synonym: "ventral intermandibulari posterior" EXACT PLURAL [] xref: TAO:0007048 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007049 @@ -29562,8 +29729,8 @@ def: "Is a mandibular muscle that forms along the palatoquadrates and inserts on synonym: "dorsal adductor mandibulae" EXACT [] xref: TAO:0007049 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000041 ! Larval:Days 21-29 -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000041 ! larval:days 21-29 +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0007050 @@ -29573,7 +29740,7 @@ def: "Dorsal subdivision of the putative mandibular muscle plate. Splits into th synonym: "constrictors dorsalis" EXACT PLURAL [] xref: TAO:0007050 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0007051 @@ -29585,7 +29752,7 @@ synonym: "ventral interhyoidei" EXACT PLURAL [] synonym: "ventral interhyoideus" EXACT [] xref: TAO:0007051 is_a: ZFA:0000521 ! hyoid muscle -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007052 @@ -29595,7 +29762,7 @@ def: "Is a ventral,paired hyoid muscle that inserts at the most anterior basibra synonym: "hyohyal" EXACT [] xref: TAO:0007052 is_a: ZFA:0000521 ! hyoid muscle -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007053 @@ -29606,7 +29773,7 @@ synonym: "dorsal adductor hyomandibulae" EXACT [] synonym: "dorsal adductors hyomandibulae" EXACT PLURAL [] xref: TAO:0007053 is_a: ZFA:0000521 ! hyoid muscle -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007054 @@ -29661,7 +29828,7 @@ synonym: "ocular vasculature" RELATED [] synonym: "optic vasculature" EXACT [] xref: TAO:0007057 is_a: ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0007058 @@ -29670,9 +29837,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the dorsal-most aspect of the developing neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0007058 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007059 @@ -29683,8 +29850,8 @@ synonym: "neurogenic fields" EXACT PLURAL [] xref: TAO:0007059 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007013 ! preplacodal ectoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007060 @@ -29694,8 +29861,8 @@ def: "Neurogenic field fated to develop into a dorsolateral placode." [GOC:ymb, synonym: "dorsolateral fields" EXACT PLURAL [] xref: TAO:0007060 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007061 @@ -29705,7 +29872,7 @@ def: "Neurogenic field fated to develop into an epibranchial placode." [GOC:ymb, synonym: "epibranchial fields" EXACT PLURAL [] xref: TAO:0007061 is_a: ZFA:0007059 ! neurogenic field -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007062 @@ -29715,8 +29882,8 @@ def: "Neurogenic field fated to develop into the olfactory placode." [GOC:ymb, O synonym: "olfactory fields" EXACT PLURAL [] xref: TAO:0007062 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000025 ! Segmentation:10-13 somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000025 ! segmentation:10-13 somites +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007063 @@ -29726,8 +29893,8 @@ def: "Cranial neural crest that is part of the hindbrain." [GOC:ymb, ORCiD:0000- synonym: "rhombencephalic neural crest" EXACT [] xref: TAO:0007063 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:51:35Z @@ -29738,9 +29905,9 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the mandibular arch." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-061108-6] xref: TAO:0007064 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:53:53Z @@ -29751,9 +29918,9 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the hyoid arch." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-061108-6] xref: TAO:0007065 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:56:12Z @@ -29764,8 +29931,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the glossopharyngeal ganglion." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0007066 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-11-04T03:39:42Z @@ -29813,7 +29980,7 @@ namespace: zebrafish_anatomy def: "Is a portion of tissue that is the most anterior portion of the notochord. The flexural organ secretes Reissner's fiber-related proteins, including F-spondin." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-120709-5] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2012-07-18T02:12:26Z @@ -29835,7 +30002,7 @@ def: "An enlarged chamber in the blood sinus capable of accumulating a large vol synonym: "blood sinus lumen" EXACT [] is_a: ZFA:0001643 ! anatomical space relationship: part_of ZFA:0007072 ! blood sinus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2014-10-24T02:14:28Z @@ -29846,7 +30013,7 @@ namespace: zebrafish_anatomy def: "Is a three-chambered blood sinus found at the base of the maxillary barbel. Responsible, in part, for the movement of the maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140816-6] is_a: ZFA:0007072 ! blood sinus relationship: part_of ZFA:0001267 ! cranial vasculature -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:18:03Z @@ -29857,7 +30024,7 @@ namespace: zebrafish_anatomy def: "Is a multi-tissue structure forming the smallest chamber of the maxillary barbel blood sinus. It projects into the barbel shaft and has a blood filled lumen, into which extend irregular septa of vascular smooth muscle cells. Additional smooth muscle cells surround the lumen and attach the bulb to the barbel core. Circumferential to the core, there is a thin band of dermal tissue through with run several smaller capillaries and the barbel branch of the of the facial nerve (cranial nerve VII). The entire structure is wrapped by a glandular, stratified epithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:22:04Z @@ -29868,7 +30035,7 @@ namespace: zebrafish_anatomy def: "Is a multi-tissue structure that is located outside the maxillary barbel proper and is positioned on the lateral surface of the maxilla, medially attached to the lateral surface of the maxillary bone and is laterally is attached to a hemispheric capsule of dense connective tissue of the distal bulb. It connects with the smaller accessory chamber through a slight isthmus. It has a smooth muscle tunic from which extend luminally projecting muscular septa." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:27:58Z @@ -29879,7 +30046,7 @@ namespace: zebrafish_anatomy def: "Is a multi-tissue structure part of the maxillary barbel blood sinus which is connected to the central chamber of the maxillary blood sinus by a slight isthmus. It is not muscularized, has no dense connective tissue capsule and is not attached to adjacent bone. Is composed of dark tunica intima wrapped by thick, light tunica adventitia; cells within the adventitia are widely separated, with extended cytoplasmic veils. External to the adventitia, a branch of the facial nerve and several smaller nerve bundles appear in cross section just lateral to the isthmus. These nerves are in the dermis, but outside the sinus." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:34:40Z @@ -29891,7 +30058,7 @@ def: "A blind end lymph vessel that emerges from the maxilla, wraps around the s synonym: "dorsal maxillary barbel lymph vessel" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:41:22Z @@ -29903,7 +30070,7 @@ def: "Blood vessel that emerges from the maxilla, wraps around the sinus isthmus synonym: "ventral maxillary barbel blood vessel" EXACT [] is_a: ZFA:0005314 ! blood vessel relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:46:19Z @@ -29914,7 +30081,7 @@ namespace: zebrafish_anatomy def: "Is a vasculature that delivers fluid to the maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1] is_a: ZFA:0005249 ! vasculature relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:52:05Z @@ -29933,9 +30100,9 @@ name: neural plate border namespace: zebrafish_anatomy def: "Region of the neural plate that will give rise to the neural crest. The neural plate border includes progenitors for the dorsal neural tube, the neural crest, and placodes. It is a broad competence domain, established between neural and non-neural ectoderm within which subtle and sequential cell autonomous and non-cell autonomous molecular interactions will progressively define the neural crest fate from adjacent dorsal neural fates." [GOC:ymb, ORCiD:0000-0002-9900-7880, PMID:22305800] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly created_by: yvonne creation_date: 2016-01-28T08:43:28Z @@ -29945,7 +30112,7 @@ name: premigratory neural crest namespace: zebrafish_anatomy def: "Premigratory neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-01-28T09:06:50Z @@ -29954,10 +30121,11 @@ id: ZFA:0007084 name: premigratory neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory neural crest cells" EXACT PLURAL [] xref: CL:0007004 is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0007083 ! premigratory neural crest created_by: yvonne creation_date: 2016-01-28T09:29:06Z @@ -29969,8 +30137,8 @@ namespace: zebrafish_anatomy def: "Migratory neural crest population that develops from premigratory neural crest. This group of neural crest has undergone ectomesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000045 ! neural crest relationship: develops_from ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-01-28T12:04:14Z @@ -29979,13 +30147,14 @@ id: ZFA:0007086 name: migratory neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory neural crest population. Migratory neural crest cells develop from premigratory neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory neural crest cells" EXACT PLURAL [] xref: CL:0000333 is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0007084 ! premigratory neural crest cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0007085 ! migratory neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-01-28T01:35:09Z @@ -30007,8 +30176,8 @@ namespace: zebrafish_anatomy def: "Premigratory cranial neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001194 ! cranial neural crest is_a: ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-07T03:27:33Z @@ -30017,9 +30186,10 @@ id: ZFA:0007089 name: embryonic cell namespace: zebrafish_anatomy def: "A cell of the embryo." [CL:curator] +subset: cell_slim xref: CL:0002321 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin created_by: yvonne creation_date: 2016-03-30T01:24:36Z @@ -30028,10 +30198,11 @@ id: ZFA:0007090 name: premigratory cranial neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory cranial neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory cranial neural crest cells" EXACT PLURAL [] is_a: ZFA:0007084 ! premigratory neural crest cell is_a: ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007088 ! premigratory cranial neural crest created_by: yvonne creation_date: 2016-03-31T12:37:58Z @@ -30041,11 +30212,12 @@ id: ZFA:0007091 name: migratory cranial neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory cranial neural crest population. Migratory cranial neural crest cells develop from premigratory cranial neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory cranial neural crest cells" EXACT PLURAL [] xref: CL:0000008 is_a: ZFA:0007086 ! migratory neural crest cell relationship: develops_from ZFA:0007090 ! premigratory cranial neural crest cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007087 ! migratory cranial neural crest created_by: yvonne creation_date: 2016-03-31T12:43:55Z @@ -30057,8 +30229,8 @@ namespace: zebrafish_anatomy def: "Premigratory trunk neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001024 ! trunk neural crest is_a: ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000030 ! pharyngula:prim-15 +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:03:25Z @@ -30070,7 +30242,7 @@ def: "Migratory trunk neural crest population that develops from premigratory tr is_a: ZFA:0001024 ! trunk neural crest is_a: ZFA:0007085 ! migratory neural crest relationship: develops_from ZFA:0007092 ! premigratory trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:11:09Z @@ -30079,10 +30251,11 @@ id: ZFA:0007094 name: premigratory trunk neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory trunk neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory trunk neural crest cells" EXACT PLURAL [] is_a: ZFA:0007084 ! premigratory neural crest cell is_a: ZFA:0009004 ! trunk neural crest cell -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0007092 ! premigratory trunk neural crest created_by: yvonne creation_date: 2016-03-31T01:18:04Z @@ -30092,11 +30265,12 @@ id: ZFA:0007095 name: migratory trunk neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory trunk neural crest population. Migratory trunk neural crest cells develop from premigratory trunk neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory trunk neural crest cells" EXACT PLURAL [] xref: CL:0000011 is_a: ZFA:0007086 ! migratory neural crest cell relationship: develops_from ZFA:0007094 ! premigratory trunk neural crest cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0007093 ! migratory trunk neural crest created_by: yvonne creation_date: 2016-03-31T01:22:09Z @@ -30269,7 +30443,7 @@ name: anatomical conduit namespace: zebrafish_anatomy def: "An anatomical structure that is an opening or tube that connects two distinct anatomical spaces." [GOC:ymb, ORCid:0000-0002-9900-7880] is_a: ZFA:0000037 ! anatomical structure -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2018-03-23T11:46:06Z @@ -30298,8 +30472,8 @@ namespace: zebrafish_anatomy def: "Joint between Meckel's cartilage and palatoquadrate cartilage." [GOC:ymb, ORCid:0000-0002-9900-7880, ZFIN:ZDB-PUB-151122-6] synonym: "jaw joint" EXACT [] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Yvonne creation_date: 2019-04-05T15:06:57Z @@ -30311,7 +30485,7 @@ def: "The vertebral body end plate is part of the autocentrum. The anterior and synonym: "vertebral body endplate" EXACT [] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000126 ! centrum -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Yvonne creation_date: 2019-04-08T12:21:06Z @@ -30323,7 +30497,7 @@ def: "Ligament that connects adjacent vertebra. The intervertebral ligament (IVL synonym: "IVL" EXACT [] is_a: ZFA:0001675 ! ligament relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Yvonne creation_date: 2019-04-08T13:27:22Z @@ -30332,6 +30506,7 @@ id: ZFA:0007120 name: cerebrospinal fluid contacting neuron namespace: zebrafish_anatomy def: "Spinal cord interneuron located along the central canal that extends a microvilliated apical process into the cerebrospinal fluid and extends ascending axonal projections ventrally and ipsilaterally. CSF-cNs are GABAergic neurons that express PKD2L1 (TRPP3) channels and have been shown to be chemosensory and mechanosensory, responding to pH and osmolarity changes as well as mechanical stimuli associated with tail bending. CSF-cNs originate from two distinct progenitor domains, p3 and pMN. CSF-cNs project onto caudal primary (CaP motor neurons) and commissural primary ascending (CoPA) sensory interneurons within the escape circuit as well as onto V0-v interneurons within the slow swimming circuit." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-170409-2] +subset: cell_slim synonym: "CSF-cN" EXACT [ZFIN:ZDB-PUB-170409-2] synonym: "CSF-cNs" EXACT PLURAL [ZFIN:ZDB-PUB-170409-2] is_a: ZFA:0000778 ! spinal cord interneuron @@ -30345,6 +30520,7 @@ id: ZFA:0007121 name: ventral cerebrospinal fluid contacting neuron namespace: zebrafish_anatomy def: "A cerebrospinal fluid contacting neuron that originates form p3 progenitor domain. The apical extension of ventral CSF-cNs are more compact than that of dorsal CSF-cNs. Ventral CSF-cNs synapse with CaP motor neurons and project onto CoPA sensory interneurons. Ventral CSF-cNs respond to longitudinal contractions of the spinal cord. Frequently called KA\" neurons." [GOC:ymb, ORDiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-170409-2] +subset: cell_slim synonym: "KA 2" RELATED [] synonym: "ventral CSF-cN" EXACT [ZFIN:ZDB-PUB-170409-2] synonym: "ventral CSF-cNs" EXACT PLURAL [ZFIN:ZDB-PUB-170409-2] @@ -30357,6 +30533,7 @@ id: ZFA:0007122 name: epidermal stem cell namespace: zebrafish_anatomy def: "A stem cell that gives rise to several epidermal cell types, including ionocytes and keratinocytes." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "" RELATED [] xref: CL:1000428 is_a: ZFA:0009020 ! multi fate stem cell @@ -30368,10 +30545,11 @@ id: ZFA:0007123 name: ionocyte progenitor cell namespace: zebrafish_anatomy def: "A cell that will become an ionocyte. Ionocyte progenitor cells develop from epidermal stem cells in the ventral ectoderm that are DeltaC and Tp63 positive." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-190402-19] +subset: cell_slim synonym: "ionocyte progenitor cells" EXACT PLURAL [] is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0007122 ! epidermal stem cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T14:01:21Z @@ -30380,10 +30558,11 @@ id: ZFA:0007124 name: keratinocyte progenitor cell namespace: zebrafish_anatomy def: "A cell that will become a keratinocyte. Keratinocyte progenitor cells develop from epidermal stem cells in the ventral ectoderm that are DeltaC negative and Tp63 positive." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-190402-19] +subset: cell_slim synonym: "keratinocyte progenitor cells" EXACT PLURAL [] is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0007122 ! epidermal stem cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T14:12:30Z @@ -30395,7 +30574,7 @@ def: "A portion of tissue that is the deepest point of the fold of the midbrain synonym: "MHBC" EXACT [ZFIN:ZDB-PUB-080825-24] is_a: ZFA:0001477 ! portion of tissue relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Yvonne creation_date: 2020-03-04T12:35:25Z @@ -30432,7 +30611,7 @@ synonym: "early embryonic cells" EXACT PLURAL [] xref: CL:0000007 xref: TAO:0009002 is_a: ZFA:0007089 ! embryonic cell -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0009003 @@ -30442,9 +30621,9 @@ def: "A cell of the cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] subset: cell_slim synonym: "cranial neural crest cells" EXACT PLURAL [] is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001194 ! cranial neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009004 @@ -30455,7 +30634,7 @@ subset: cell_slim synonym: "trunk neural crest cells" EXACT PLURAL [] is_a: ZFA:0009165 ! neural crest cell relationship: part_of ZFA:0001024 ! trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009005 @@ -30469,7 +30648,7 @@ xref: TAO:0009005 is_a: ZFA:0009016 ! germ line cell relationship: develops_from ZFA:0009007 ! spermatogonium relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0009006 @@ -30507,7 +30686,7 @@ xref: CL:0000029 xref: TAO:0009009 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009010 @@ -30520,8 +30699,8 @@ xref: TAO:0009010 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009011 @@ -30542,7 +30721,7 @@ synonym: "neuroplacodal cells" EXACT PLURAL [] xref: CL:0000032 xref: TAO:0009012 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009013 @@ -30570,7 +30749,7 @@ xref: TAO:0009014 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009258 ! angioblastic mesenchymal cell relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009015 @@ -30599,7 +30778,7 @@ synonym: "germ line cells" EXACT PLURAL [] xref: CL:0000039 xref: TAO:0009016 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009017 @@ -30694,7 +30873,7 @@ xref: CL:0000051 xref: TAO:0009023 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009024 @@ -30718,8 +30897,8 @@ xref: CL:0000056 xref: TAO:0009025 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009179 ! muscle stem cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009026 @@ -30733,7 +30912,7 @@ xref: CL:0000057 xref: TAO:0009026 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009027 @@ -30747,9 +30926,9 @@ xref: TAO:0009027 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001501 ! cartilage element -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009028 @@ -30762,7 +30941,7 @@ xref: CL:0000059 xref: TAO:0009028 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0005134 ! dental epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009029 @@ -30776,7 +30955,7 @@ xref: TAO:0009029 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: part_of ZFA:0005141 ! tooth pulp -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009030 @@ -30789,7 +30968,7 @@ xref: CL:0000061 xref: TAO:0009030 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009031 @@ -30803,7 +30982,7 @@ xref: TAO:0009031 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: develops_from ZFA:0009184 ! osteoprogenitor cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009032 @@ -30814,7 +30993,7 @@ synonym: "ciliated cells" EXACT PLURAL [] xref: CL:0000064 xref: TAO:0009032 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009033 @@ -30840,7 +31019,7 @@ xref: CL:0000066 xref: TAO:0009034 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0001486 ! epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009035 @@ -30876,7 +31055,7 @@ synonym: "barrier epithelial cells" EXACT PLURAL [] xref: CL:0000073 xref: TAO:0009037 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009038 @@ -30941,7 +31120,7 @@ synonym: "circulating cells" EXACT PLURAL [] xref: CL:0000080 xref: TAO:0009043 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009044 @@ -30954,7 +31133,7 @@ xref: CL:0000081 xref: TAO:0009044 is_a: ZFA:0005830 ! hematopoietic cell relationship: part_of ZFA:0000007 ! blood -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009045 @@ -31006,7 +31185,7 @@ xref: CL:0000092 xref: TAO:0009047 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009265 ! monocyte -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009048 @@ -31222,9 +31401,9 @@ subset: cell_slim xref: CL:0000116 xref: TAO:0009066 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000048 ! olfactory placode -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009067 @@ -31305,7 +31484,7 @@ xref: TAO:0009073 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009010 ! glioblast relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009074 @@ -31362,7 +31541,7 @@ is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009139 ! endodermal cell relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009079 @@ -31388,7 +31567,7 @@ xref: CL:0000133 xref: TAO:0009080 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009137 ! ectodermal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009081 @@ -31401,7 +31580,7 @@ xref: CL:0000134 xref: TAO:0009081 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009082 @@ -31420,7 +31599,7 @@ xref: TAO:0009208 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: part_of ZFA:0005345 ! adipose tissue -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0009083 @@ -31434,7 +31613,7 @@ xref: TAO:0009083 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009031 ! osteoblast relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009084 @@ -31473,7 +31652,7 @@ xref: TAO:0009086 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009029 ! odontoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009087 @@ -31488,7 +31667,7 @@ is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009030 ! cementoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009088 @@ -31523,7 +31702,7 @@ synonym: "chromatophore" EXACT [] xref: CL:0000147 xref: TAO:0009090 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009091 @@ -31539,7 +31718,7 @@ is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0009249 ! melanoblast relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0005915 ! iris melanophore layer -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009092 @@ -31551,7 +31730,7 @@ synonym: "exocrine cells" EXACT PLURAL [] xref: CL:0000152 xref: TAO:0009092 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009093 @@ -31574,7 +31753,7 @@ xref: CL:0000160 xref: TAO:0009094 is_a: ZFA:0009159 ! mucus secreting cell relationship: part_of ZFA:0001486 ! epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009095 @@ -31585,7 +31764,7 @@ synonym: "acid secreting cells" EXACT PLURAL [] xref: CL:0000161 xref: TAO:0009095 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009096 @@ -31598,7 +31777,7 @@ xref: CL:0000163 xref: TAO:0009096 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009097 @@ -31610,7 +31789,7 @@ synonym: "enteroendocrine cells" EXACT PLURAL [] xref: CL:0000164 xref: TAO:0009097 is_a: ZFA:0009096 ! endocrine cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009098 @@ -31645,7 +31824,7 @@ synonym: "peptide hormone secreting cells" EXACT PLURAL [] xref: CL:0000167 xref: TAO:0009100 is_a: ZFA:0009096 ! endocrine cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009101 @@ -31708,7 +31887,7 @@ synonym: "steroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000174 xref: TAO:0009106 is_a: ZFA:0009096 ! endocrine cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009107 @@ -31776,7 +31955,7 @@ synonym: "perivascular cells" EXACT [] xref: CL:0000669 xref: TAO:0009112 is_a: ZFA:0005944 ! mural cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009113 @@ -31802,7 +31981,7 @@ xref: TAO:0009114 is_a: ZFA:0009190 ! electrically responsive cell relationship: develops_from ZFA:0009025 ! myoblast relationship: part_of ZFA:0005145 ! muscle -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009115 @@ -31845,7 +32024,7 @@ xref: CL:0000190 xref: TAO:0009117 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0009369 ! fast muscle myoblast -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0009118 @@ -31936,7 +32115,7 @@ xref: CL:0000207 xref: TAO:0009125 is_a: ZFA:0009124 ! chemoreceptor cell relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009126 @@ -31970,7 +32149,7 @@ synonym: "electrically active cells" EXACT PLURAL [] xref: CL:0000211 xref: TAO:0009128 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009129 @@ -31982,7 +32161,7 @@ synonym: "absorptive cells" EXACT PLURAL [] xref: CL:0000212 xref: TAO:0009129 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009130 @@ -32017,7 +32196,7 @@ synonym: "barrier cells" EXACT PLURAL [] xref: CL:0000215 xref: TAO:0009132 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009133 @@ -32030,7 +32209,7 @@ xref: CL:0000216 xref: TAO:0009133 is_a: ZFA:0009132 ! barrier cell relationship: part_of ZFA:0005882 ! spermatogenic cyst -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0009134 @@ -32056,7 +32235,7 @@ is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) is_a: ZFA:0009163 ! myelin accumulating cell relationship: develops_from ZFA:0001725 ! immature Schwann cell relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009136 @@ -32068,7 +32247,7 @@ synonym: "motile cells" EXACT PLURAL [] xref: CL:0000219 xref: TAO:0009136 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009137 @@ -32080,9 +32259,9 @@ synonym: "ectoderm cell" EXACT [] xref: CL:0000221 xref: TAO:0009137 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009138 @@ -32095,9 +32274,9 @@ synonym: "mesoderm cell" EXACT [] xref: CL:0000222 xref: TAO:0009138 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009139 @@ -32109,9 +32288,9 @@ synonym: "endoderm cell" EXACT [] xref: CL:0000223 xref: TAO:0009139 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000017 ! endoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009140 @@ -32136,7 +32315,7 @@ xref: TAO:0009141 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009265 ! monocyte -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009142 @@ -32192,7 +32371,7 @@ synonym: "Merkel cells" EXACT PLURAL [] xref: CL:0000242 xref: TAO:0009146 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009147 @@ -32205,7 +32384,7 @@ xref: CL:0000243 xref: TAO:0009147 is_a: ZFA:0009073 ! glial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009148 @@ -32229,10 +32408,10 @@ xref: CL:0000246 xref: TAO:0009149 is_a: ZFA:0005865 ! reticulospinal neuron is_a: ZFA:0009194 ! CNS short range interneuron -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009150 @@ -32247,7 +32426,7 @@ synonym: "Rohon-Beard neurons" EXACT PLURAL [] xref: CL:0000247 xref: TAO:0009150 is_a: ZFA:0009053 ! sensory neuron -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0009151 @@ -32258,7 +32437,7 @@ synonym: "hatching gland cells" EXACT PLURAL [] xref: CL:0000249 xref: TAO:0009151 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009152 @@ -32309,7 +32488,7 @@ xref: CL:0000295 xref: TAO:0009155 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009156 @@ -32322,7 +32501,7 @@ xref: CL:0000300 xref: TAO:0009156 is_a: ZFA:0009016 ! germ line cell relationship: part_of ZFA:0000413 ! gonad -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0009157 @@ -32333,7 +32512,7 @@ synonym: "keratin accumulating cells" EXACT PLURAL [] xref: CL:0000311 xref: TAO:0009157 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009158 @@ -32359,7 +32538,7 @@ xref: TAO:0009159 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009160 @@ -32370,7 +32549,7 @@ synonym: "seminal fluid secreting cells" EXACT PLURAL [] xref: CL:0000321 xref: TAO:0009160 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009161 @@ -32402,7 +32581,7 @@ synonym: "myelin accumulating cells" EXACT PLURAL [] xref: CL:0000328 xref: TAO:0009163 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009164 @@ -32413,7 +32592,7 @@ synonym: "oxygen accumulating cells" EXACT PLURAL [] xref: CL:0000329 xref: TAO:0009164 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009165 @@ -32423,9 +32602,9 @@ def: "A cell of the neural crest. The neural crest is a strip of specialized ect subset: cell_slim synonym: "neural crest cells" EXACT PLURAL [] is_a: ZFA:0007089 ! embryonic cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000045 ! neural crest -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009166 @@ -32437,7 +32616,7 @@ xref: CL:0000335 xref: TAO:0009166 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009167 @@ -32449,7 +32628,7 @@ xref: CL:0000336 xref: TAO:0009167 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009168 @@ -32469,7 +32648,7 @@ synonym: "glioblasts (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000339 xref: TAO:0009169 is_a: ZFA:0009010 ! glioblast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009170 @@ -32480,7 +32659,7 @@ synonym: "pigment cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000342 xref: TAO:0009170 is_a: ZFA:0009090 ! pigment cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009171 @@ -32492,7 +32671,7 @@ xref: CL:0000343 xref: TAO:0009171 is_a: ZFA:0009170 ! pigment cell (sensu Vertebrata) relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009172 @@ -32516,7 +32695,7 @@ xref: TAO:0009173 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: part_of ZFA:0005140 ! dental papilla -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009174 @@ -32530,7 +32709,7 @@ xref: TAO:0009174 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: part_of ZFA:0005563 ! sclera -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009175 @@ -32543,7 +32722,7 @@ xref: CL:0000348 xref: TAO:0009175 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009176 @@ -32554,7 +32733,7 @@ synonym: "extraembryonic cells" EXACT PLURAL [] xref: CL:0000349 xref: TAO:0009176 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009177 @@ -32567,7 +32746,7 @@ xref: CL:0000353 xref: TAO:0009177 is_a: ZFA:0009002 ! early embryonic cell relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0009178 @@ -32589,7 +32768,7 @@ xref: CL:0000355 xref: TAO:0009179 is_a: ZFA:0009013 ! single fate stem cell is_a: ZFA:0009291 ! muscle precursor cell -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009180 @@ -32600,7 +32779,7 @@ synonym: "stratified epithelial stem cells" EXACT PLURAL [] xref: CL:0000357 xref: TAO:0009180 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009181 @@ -32623,8 +32802,8 @@ synonym: "gastrula cells" EXACT PLURAL [] xref: CL:0000361 xref: TAO:0009182 is_a: ZFA:0009002 ! early embryonic cell -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0009183 @@ -32689,7 +32868,7 @@ xref: CL:0000384 xref: TAO:0009188 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0001675 ! ligament -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009189 @@ -32700,7 +32879,7 @@ synonym: "muscle attachment cell" EXACT [] xref: CL:0000388 xref: TAO:0009189 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009190 @@ -32778,7 +32957,7 @@ xref: TAO:0009198 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005245 ! xanthoblast relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0009199 @@ -32796,7 +32975,7 @@ relationship: develops_from ZFA:0005328 ! iridoblast relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0005914 ! argentum relationship: part_of ZFA:0005916 ! tapetum lucidum -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0009200 @@ -32817,7 +32996,7 @@ synonym: "alkali secreting cells" EXACT PLURAL [] xref: CL:0000435 xref: TAO:0009201 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009202 @@ -32863,7 +33042,7 @@ xref: CL:0000439 xref: TAO:0009204 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: part_of ZFA:0005580 ! rostral pars anterior -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009205 @@ -32877,7 +33056,7 @@ xref: CL:0000440 xref: TAO:0009205 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: part_of ZFA:0001197 ! pars intermedia -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009206 @@ -32919,7 +33098,7 @@ synonym: "thyroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000452 xref: TAO:0009210 is_a: ZFA:0009096 ! endocrine cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009211 @@ -32940,7 +33119,7 @@ synonym: "biogenic amine secreting cells" EXACT PLURAL [] xref: CL:0000457 xref: TAO:0009212 is_a: ZFA:0009096 ! endocrine cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009213 @@ -32989,7 +33168,7 @@ xref: CL:0000467 xref: TAO:0009216 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: part_of ZFA:0005580 ! rostral pars anterior -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009217 @@ -33001,7 +33180,7 @@ xref: CL:0000470 xref: TAO:0009217 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009218 @@ -33016,7 +33195,7 @@ xref: CL:0000476 xref: TAO:0009218 is_a: ZFA:0009100 ! peptide hormone secreting cell relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009219 @@ -33099,7 +33278,7 @@ xref: CL:0000499 xref: TAO:0009226 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009227 @@ -33176,7 +33355,7 @@ synonym: "paracrine cells" EXACT PLURAL [] xref: CL:0000512 xref: TAO:0009233 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009234 @@ -33188,7 +33367,7 @@ synonym: "cardioblast" RELATED [] xref: CL:0000513 xref: TAO:0009234 is_a: ZFA:0009025 ! myoblast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009235 @@ -33200,7 +33379,7 @@ synonym: "satellite cell" RELATED [] xref: CL:0000514 xref: TAO:0009235 is_a: ZFA:0009025 ! myoblast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009236 @@ -33212,7 +33391,7 @@ synonym: "skeletal muscle myoblasts" EXACT PLURAL [] xref: CL:0000515 xref: TAO:0009236 is_a: ZFA:0009025 ! myoblast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009237 @@ -33280,7 +33459,7 @@ subset: cell_slim xref: CL:0000530 xref: TAO:0009242 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001120 ! neuroectoderm [Term] @@ -33307,7 +33486,7 @@ xref: CL:0000533 xref: TAO:0009244 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown [Term] id: ZFA:0009245 @@ -33319,8 +33498,8 @@ xref: CL:0000534 xref: TAO:0009245 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009246 @@ -33344,8 +33523,8 @@ xref: CL:0000536 xref: TAO:0009247 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009246 ! secondary neuron -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009248 @@ -33360,7 +33539,7 @@ is_a: ZFA:0009190 ! electrically responsive cell is_a: ZFA:0009193 ! electrically signaling cell relationship: develops_from ZFA:0009011 ! neuroblast relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009249 @@ -33373,8 +33552,8 @@ xref: CL:0000541 xref: TAO:0009249 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009250 @@ -33480,7 +33659,7 @@ xref: CL:0000564 xref: TAO:0009257 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009018 ! neutrophilic myeloblast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009258 @@ -33505,7 +33684,7 @@ xref: TAO:0009259 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009260 @@ -33517,7 +33696,7 @@ xref: CL:0000570 xref: TAO:0009260 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009261 @@ -33532,7 +33711,7 @@ xref: TAO:0009261 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005329 ! leucoblast relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009262 @@ -33557,7 +33736,7 @@ xref: TAO:0009263 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005331 ! pigment erythroblast relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009264 @@ -33714,7 +33893,7 @@ synonym: "acinar cells" EXACT PLURAL [] xref: CL:0000622 xref: TAO:0009277 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009278 @@ -33766,7 +33945,7 @@ xref: CL:0000642 xref: TAO:0009281 is_a: ZFA:0009096 ! endocrine cell relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009282 @@ -33788,7 +33967,7 @@ xref: CL:0000650 xref: TAO:0009283 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009284 @@ -33811,7 +33990,7 @@ xref: CL:0000653 xref: TAO:0009285 is_a: ZFA:0009034 ! epithelial cell relationship: part_of ZFA:0000163 ! renal system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009286 @@ -33845,9 +34024,9 @@ xref: CL:0000670 xref: TAO:0009288 is_a: ZFA:0009016 ! germ line cell is_a: ZFA:0009136 ! motile cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0009289 @@ -33860,7 +34039,7 @@ xref: CL:0000677 xref: TAO:0009289 is_a: ZFA:0009129 ! absorptive cell relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009290 @@ -33883,8 +34062,8 @@ xref: TAO:0009291 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009292 @@ -33898,8 +34077,8 @@ xref: TAO:0009292 is_a: ZFA:0009168 ! neuroblast (sensu Vertebrata) relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009293 @@ -33967,7 +34146,7 @@ xref: TAO:0009298 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009073 ! glial cell relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009299 @@ -34012,7 +34191,7 @@ synonym: "sustentacular cells" EXACT PLURAL [] xref: CL:0000703 xref: TAO:0009302 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009303 @@ -34059,20 +34238,19 @@ xref: CL:0000710 xref: TAO:0009306 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009307 name: somatic stem cell namespace: zebrafish_anatomy -def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:CJM] +def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:cjm] comment: Definition originally referred to GO:0048103. Changed to GOC: CJM to match other references. subset: cell_slim synonym: "somatic stem cells" EXACT PLURAL [] xref: CL:0000723 xref: TAO:0009307 -is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +is_a: ZFA:0005957 ! stem cell [Term] id: ZFA:0009308 @@ -34195,7 +34373,7 @@ xref: TAO:0009317 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005332 ! cyanoblast relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009318 @@ -34611,7 +34789,7 @@ xref: TAO:0009350 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor relationship: part_of ZFA:0001078 ! thymus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009351 @@ -34764,7 +34942,7 @@ xref: CL:0000851 xref: TAO:0009362 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009363 @@ -34777,7 +34955,7 @@ xref: CL:0000852 xref: TAO:0009363 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009364 @@ -34789,7 +34967,7 @@ synonym: "olfactory sustentacular cell" EXACT [] xref: CL:0000853 xref: TAO:0009364 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009365 @@ -34802,9 +34980,9 @@ xref: CL:0000854 xref: TAO:0009365 is_a: ZFA:0009080 ! neurectodermal cell relationship: develops_from ZFA:0009012 ! neuroplacodal cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009366 @@ -34928,7 +35106,7 @@ subset: cell_slim xref: CL:0002538 is_a: ZFA:0009372 ! duct epithelial cell relationship: part_of ZFA:0005169 ! intrahepatic bile duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-07-29T05:21:19Z @@ -34941,7 +35119,7 @@ subset: cell_slim xref: CL:0002079 is_a: ZFA:0009372 ! duct epithelial cell relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2013-07-29T05:23:07Z @@ -34989,7 +35167,7 @@ def: "A cell of an organism that does not pass on its genetic material to the or subset: cell_slim xref: CL:0002371 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009387 @@ -34999,7 +35177,7 @@ def: "A cell whose primary function is to support other cell types." [FB:ma, GOC subset: cell_slim xref: CL:0000630 is_a: ZFA:0009000 ! cell -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009388 @@ -35022,7 +35200,7 @@ subset: cell_slim xref: CL:1000497 is_a: ZFA:0009386 ! somatic cell relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0009390 @@ -35117,8 +35295,8 @@ def: "Multi fate stem cell that gives rise to both hepatocytes and cholangiocyte subset: cell_slim is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0000124 ! liver primordium -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-08-02T12:13:12Z @@ -35131,7 +35309,7 @@ subset: cell_slim xref: CL:0002563 is_a: ZFA:0009383 ! endo-epithelial cell relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2013-08-02T04:26:27Z @@ -35144,7 +35322,7 @@ subset: cell_slim xref: CL:0002252 is_a: ZFA:0009383 ! endo-epithelial cell relationship: part_of ZFA:0000204 ! esophagus -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2013-08-02T04:32:14Z @@ -35153,10 +35331,11 @@ id: ZFA:0009401 name: lens fiber cell namespace: zebrafish_anatomy def: "A vertebrate lens cell that is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye." [GOC:nv] +subset: cell_slim xref: CL:0011004 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-09-01T15:46:37Z @@ -35169,7 +35348,7 @@ subset: cell_slim xref: CL:1000147 is_a: ZFA:0009000 ! cell relationship: part_of ZFA:0005065 ! heart valve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-08T09:32:56Z @@ -35186,10 +35365,11 @@ creation_date: 2020-12-08T09:43:48Z [Term] id: ZFA:0009404 -name: heart valve endothelial cells +name: heart valve endothelial cell namespace: zebrafish_anatomy def: "Endothelial cells that surround the heart valve extracellular matrix." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191202-2] subset: cell_slim +synonym: "heart valve endocardial cell" EXACT [ZFIN:ZDB-PUB-200221-32] synonym: "VEC" RELATED [ZFIN:ZDB-PUB-191202-2] is_a: ZFA:0009402 ! heart valve cell created_by: ceriv @@ -35202,367 +35382,466 @@ namespace: zebrafish_anatomy [Term] id: ZFS:0000000 -name: Unknown +name: unknown namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-050211-1 xref: ZFIN:ZDB-TERM-100331-2430 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage [Term] id: ZFS:0000001 -name: Zygote:1-cell +name: zygote:1-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-4 xref: ZFIN:ZDB-TERM-100331-2431 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage [Term] id: ZFS:0000002 -name: Cleavage:2-cell +name: cleavage:2-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-15 xref: ZFIN:ZDB-TERM-100331-2432 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000003 -name: Cleavage:4-cell +name: cleavage:4-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-11 xref: ZFIN:ZDB-TERM-100331-2433 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000004 -name: Cleavage:8-cell +name: cleavage:8-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-33 xref: ZFIN:ZDB-TERM-100331-2434 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000005 -name: Cleavage:16-cell +name: cleavage:16-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-20 xref: ZFIN:ZDB-TERM-100331-2435 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000006 -name: Cleavage:32-cell +name: cleavage:32-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-25 xref: ZFIN:ZDB-TERM-100331-2436 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000007 -name: Cleavage:64-cell +name: cleavage:64-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-28 xref: ZFIN:ZDB-TERM-100331-2437 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000008 -name: Blastula:128-cell +name: blastula:128-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-7 xref: ZFIN:ZDB-TERM-100331-2438 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000009 -name: Blastula:256-cell +name: blastula:256-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-1 xref: ZFIN:ZDB-TERM-100331-2439 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000010 -name: Blastula:512-cell +name: blastula:512-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-14 xref: ZFIN:ZDB-TERM-100331-2440 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000011 -name: Blastula:1k-cell +name: blastula:1k-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-22 xref: ZFIN:ZDB-TERM-100331-2441 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000012 -name: Blastula:High +name: blastula:high namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-27 xref: ZFIN:ZDB-TERM-100331-2442 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000013 -name: Blastula:Oblong +name: blastula:oblong namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-24 xref: ZFIN:ZDB-TERM-100331-2443 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000014 -name: Blastula:Sphere +name: blastula:sphere namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-21 xref: ZFIN:ZDB-TERM-100331-2444 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000015 -name: Blastula:Dome +name: blastula:dome namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-19 xref: ZFIN:ZDB-TERM-100331-2445 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000016 -name: Blastula:30%-epiboly +name: blastula:30%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-17 xref: ZFIN:ZDB-TERM-100331-2446 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000017 -name: Gastrula:50%-epiboly +name: gastrula:50%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-6 xref: ZFIN:ZDB-TERM-100331-2447 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000018 -name: Gastrula:Germ-ring +name: gastrula:germ-ring namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-3 xref: ZFIN:ZDB-TERM-100331-2448 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000019 -name: Gastrula:Shield +name: gastrula:shield namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-2 xref: ZFIN:ZDB-TERM-100331-2449 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000020 -name: Gastrula:75%-epiboly +name: gastrula:75%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-18 xref: ZFIN:ZDB-TERM-100331-2450 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000021 -name: Gastrula:90%-epiboly +name: gastrula:90%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-29 xref: ZFIN:ZDB-TERM-100331-2451 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000022 -name: Gastrula:Bud +name: gastrula:bud namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-12 xref: ZFIN:ZDB-TERM-100331-2452 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000023 -name: Segmentation:1-4 somites +name: segmentation:1-4 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-23 xref: ZFIN:ZDB-TERM-100331-2453 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000024 -name: Segmentation:5-9 somites +name: segmentation:5-9 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-5 xref: ZFIN:ZDB-TERM-100331-2454 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000025 -name: Segmentation:10-13 somites +name: segmentation:10-13 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-020626-1 xref: ZFIN:ZDB-TERM-100331-2455 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000026 -name: Segmentation:14-19 somites +name: segmentation:14-19 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-30 xref: ZFIN:ZDB-TERM-100331-2456 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000027 -name: Segmentation:20-25 somites +name: segmentation:20-25 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-16 xref: ZFIN:ZDB-TERM-100331-2457 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000028 -name: Segmentation:26+ somites +name: segmentation:26+ somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-34 xref: ZFIN:ZDB-TERM-100331-2458 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000029 -name: Pharyngula:Prim-5 +name: pharyngula:prim-5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-10 xref: ZFIN:ZDB-TERM-100331-2439 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000030 -name: Pharyngula:Prim-15 +name: pharyngula:prim-15 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-32 xref: ZFIN:ZDB-TERM-100331-2460 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000031 -name: Pharyngula:Prim-25 +name: pharyngula:prim-25 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-13 xref: ZFIN:ZDB-TERM-100331-2461 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000032 -name: Pharyngula:High-pec +name: pharyngula:high-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-31 xref: ZFIN:ZDB-TERM-100331-2462 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000033 -name: Hatching:Long-pec +name: hatching:long-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-9 xref: ZFIN:ZDB-TERM-100331-2463 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0007000 ! hatching [Term] id: ZFS:0000034 -name: Hatching:Pec-fin +name: hatching:pec-fin namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-26 xref: ZFIN:ZDB-TERM-100331-2464 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0007000 ! hatching [Term] id: ZFS:0000035 -name: Larval:Protruding-mouth +name: larval:protruding-mouth namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-8 xref: ZFIN:ZDB-TERM-100331-2465 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000036 -name: Larval:Day 4 +name: larval:day 4 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-35 xref: ZFIN:ZDB-TERM-100331-2466 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000037 -name: Larval:Day 5 +name: larval:day 5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-36 xref: ZFIN:ZDB-TERM-100331-2467 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000038 -name: Larval:Day 6 +name: larval:day 6 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-37 xref: ZFIN:ZDB-TERM-100331-2468 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000039 -name: Larval:Days 7-13 +name: larval:days 7-13 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-47 xref: ZFIN:ZDB-TERM-100331-2469 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000040 -name: Larval:Days 14-20 +name: larval:days 14-20 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-48 xref: ZFIN:ZDB-TERM-100331-2470 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000041 -name: Larval:Days 21-29 +name: larval:days 21-29 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-49 xref: ZFIN:ZDB-TERM-100331-2471 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000042 -name: Juvenile:Days 30-44 +name: juvenile:days 30-44 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-51 xref: ZFIN:ZDB-TERM-100331-2472 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000051 ! juvenile [Term] id: ZFS:0000043 -name: Juvenile:Days 45-89 +name: juvenile:days 45-89 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-52 xref: ZFIN:ZDB-TERM-100331-2473 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000051 ! juvenile [Term] id: ZFS:0000044 -name: Adult +name: adult namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-39 xref: ZFIN:ZDB-TERM-100331-2474 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage + +[Term] +id: ZFS:0000045 +name: blastula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000046 ! cleavage + +[Term] +id: ZFS:0000046 +name: cleavage +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage + +[Term] +id: ZFS:0000047 +name: gastrula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000045 ! blastula + +[Term] +id: ZFS:0000048 +name: larva +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0007000 ! hatching + +[Term] +id: ZFS:0000049 +name: segmentation +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000047 ! gastrula + +[Term] +id: ZFS:0000050 +name: pharyngula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000049 ! segmentation + +[Term] +id: ZFS:0000051 +name: juvenile +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000048 ! larva + +[Term] +id: ZFS:0007000 +name: hatching +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000050 ! pharyngula +created_by: yvonne +creation_date: 2014-11-05T08:33:09Z [Term] id: ZFS:0100000 -name: Stages +name: zebrafish stage namespace: zebrafish_stages [Typedef] @@ -35604,6 +35883,13 @@ xref: BFO:0000051 is_transitive: true is_a: overlaps ! overlaps +[Typedef] +id: immediately_preceded_by +name: immediately_preceded_by +def: "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y)." [goc:cjm] +xref: RO:0002087 +is_a: preceded_by ! preceded_by + [Typedef] id: overlaps name: overlaps @@ -35617,6 +35903,13 @@ is_transitive: true is_a: overlaps ! overlaps inverse_of: has_part ! has_part +[Typedef] +id: preceded_by +name: preceded_by +def: "X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X)." [goc:cjm] +xref: BFO:0000062 +is_transitive: true + [Typedef] id: start name: start stage diff --git a/zfa-simple.owl b/zfa-simple.owl index e8071b2..a9a5b9e 100644 --- a/zfa-simple.owl +++ b/zfa-simple.owl @@ -12,21 +12,22 @@ xmlns:terms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + + + ZFA description. Zebrafish Anatomy Ontology (ZFA) - OBO-Edit 2.3.1 - 08:03:2021 11:16 + OBO-Edit 2.3-beta5 + 29:11:2022 16:29 zebrafish_anatomical_ontology 1.2 - ceriv + zfinf CARO part_of NCBITaxon:7955 CL part_of NCBITaxon:7955 TAO part_of NCBITaxon:7955 VSAO part_of NCBITaxon:7955 - SVN version: $Revision: 1.100$ - 2022-03-15 + 2022-12-09 @@ -302,6 +303,46 @@ + + + + + X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X). + BFO:0000062 + zebrafish_anatomical_ontology + preceded_by + preceded_by + preceded_by + + + + + X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X). + goc:cjm + + + + + + + + + X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y). + RO:0002087 + zebrafish_anatomical_ontology + immediately_preceded_by + immediately_preceded_by + immediately_preceded_by + + + + + X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y). + goc:cjm + + + + @@ -1196,7 +1237,7 @@ Multi-tissue structure that is the ventral-most aspect of the developing neural tube. The floor plate is a specialized glial structure with secretory function that spans the rostral-caudal axis from the midbrain to the tail regions. The floor plate is one of first structures that differentiate in the developing nervous system. GOC:mh ORCiD:0000-0001-9114-8737 - ZFIN:ZDB-PUB-980205-16 + ZFIN:ZDB-PUB-980205-16 @@ -5435,7 +5476,7 @@ The layer within the retina where the photoreceptor cell receptor segments reside. This layer is closest to the sclera. GOC:mh ORCiD:0000-0001-9114-8737 - ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-961014-677 @@ -7002,7 +7043,7 @@ Brain structure which is one of three parts of the cerebellum and is the entry point for a posterior cerebellar tract that carries cerebellar afferents from many brain stem nuclei. From Neuroanatomy of the Zebrafish Brain. TAO:0000188 cerebellar corpus - corpus cerebelli granular layer + corpus cerebelli granular layer corpus cerebellum zebrafish_anatomy ZFA:0000188 @@ -7019,7 +7060,7 @@ - corpus cerebelli granular layer + corpus cerebelli granular layer ZFIN:ZDB-PUB-961014-1280 @@ -7517,7 +7558,7 @@ GOC:ymb ORCiD:0000-0002-2244-7917 ORCiD:0000-0002-9900-7880 - ZFIN:ZDB-PUB-030312-8 + ZFIN:ZDB-PUB-030312-8 @@ -8931,7 +8972,7 @@ cochleovestibular nerve - ZFIN:ZDB-PUB-190924-19 + ZFIN:ZDB-PUB-190924-19 @@ -9349,7 +9390,7 @@ One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -10190,7 +10231,7 @@ Paired, deep caudal fin muscles that originate from the 30th vertebra and extend toward the dorsal base of the caudal fin where they insert broadly on fin rays. TAO:0000287 - flexor caudalis dorsalis superioris + flexor caudalis dorsalis superioris superior dorsal flexor zebrafish_anatomy CDS @@ -11902,7 +11943,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -12193,7 +12234,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Compound organ that consists of gill filaments, gill lamellae, gill rakers and pharyngeal arches 3-7. The gills are responsible for primary gas exchange between the blood and the surrounding water. - http:http://www.briancoad.com/Dictionary/DicPics/gill.htm + http:http://www.briancoad.com/Dictionary/DicPics/gill.htm @@ -13022,7 +13063,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. The lymphatic system consists of blind-ended vessels, fluid and macromolecules collected from interstitial tissue space that serve as a conduit for the development and transport of lymphoid cells. - ZFIN:ZDB-PUB-130322-28 + ZFIN:ZDB-PUB-130322-28 @@ -13473,7 +13514,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -14299,7 +14340,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -14875,7 +14916,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:JCN 421-:189-198 + ZFIN:ZDB-PUB-000523-3 @@ -15119,7 +15160,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Portion of tissue, located on the upper jaw that defines the caudal extent of the labial cavity. The oral valves control the flow of water into the mouth during routine respiration. TAO:0000451 maxillary valve - upper semilunar valve + upper semilunar valve zebrafish_anatomy breathing valve buccal valve @@ -15136,7 +15177,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. - upper semilunar valve + upper semilunar valve ZFIN:ZDB-PUB-060921-12 @@ -15510,7 +15551,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -16608,7 +16649,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Mandibular muscle that inserts along the dorsolateral faces of the opercles. Responsible for opercular abduction. TAO:0000498 - dilatator opercula + dilatator opercula zebrafish_anatomy dilator opercula dilators operculi @@ -17004,7 +17045,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. LVII lobus facialis zebrafish_anatomy - tuberculum impar of Herrick + tuberculum impar of Herrick ZFA:0000512 facial lobe @@ -17423,7 +17464,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -18174,7 +18215,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000549 postemporal zebrafish_anatomy - post-temporal + post-temporal ZFA:0000549 posttemporal @@ -19627,7 +19668,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000588 auditory ganglion gVIII - octaval ganglion + octaval ganglion sag statoacoustic ganglia zebrafish_anatomy @@ -19979,7 +20020,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Multi-tissue structure that is part of the midbrain and develops from the alar plate. The torus semicircularis is located dorsal to the lateral tegmentum where it extends into the medial tectal ventricle and receives ascending sensory octavolateralis input. TAO:0000599 - semicircular torus + semicircular torus zebrafish_anatomy ZFA:0000599 torus semicircularis @@ -20224,7 +20265,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000608 transverse ventralis - transversus ventralis + transversus ventralis zebrafish_anatomy ZFA:0000608 ventral transverse @@ -27114,7 +27155,7 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - Portion of somite 16 that gives rise to body wall muscle masses. + Portion of somite 26 that gives rise to body wall muscle masses. TAO:0000807 zebrafish_anatomy ZFA:0000807 @@ -27124,7 +27165,7 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - Portion of somite 16 that gives rise to body wall muscle masses. + Portion of somite 26 that gives rise to body wall muscle masses. GOC:ymb ORCiD:0000-0002-9900-7880 ZFIN:ZDB-PUB-961014-576 @@ -32187,19 +32228,22 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) TAO:0000944 pll zebrafish_anatomy + midbody lateral line + midtrunk line ZFA:0000944 posterior lateral line - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 + ZFIN:ZDB-PUB-110811-14 @@ -45017,7 +45061,7 @@ The ciliary "body" does not contain processes or a cumferential band o tunica muscularis - http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html + http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html @@ -53541,7 +53585,7 @@ The epithelium exists before becoming folded into the rosette. The propterygium is the lateralmost or anteriormost basal cartilage that originates from the pectoral fin endoskeletal disc. The bases of the pectoral lepidotrichium 1 plus the propterygium articulates with the scapula. - TAO:Curator + TAO:Curator @@ -56104,7 +56148,7 @@ The epithelium exists before becoming folded into the rosette. Ligament that is in the eye and is located at the angle between the cornea and the iris. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-070629-16 + ZFIN:ZDB-PUB-070629-16 @@ -57989,7 +58033,7 @@ The epithelium exists before becoming folded into the rosette. Artery that runs along the ventral keel of the hindbrain. It lies between the primordial hindbrain channels(PHBC). It irrigates the hindbrain and is connected, through the hindbrain, to the PHBC by the central arteries. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-110426-11 + ZFIN:ZDB-PUB-110426-11 @@ -58070,7 +58114,7 @@ The epithelium exists before becoming folded into the rosette. branchial aortic arches - ZFIN:ZDB-PUB-080512-6 + ZFIN:ZDB-PUB-080512-6 @@ -60622,14 +60666,14 @@ The epithelium exists before becoming folded into the rosette. Portion of the cardiac conduction system, with rapid impulse propagation. In the zebrafish fast conduction takes place in the trabecular layer. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-120927-27 + ZFIN:ZDB-PUB-120927-27 ZFIN:ZDB-PUB-120928-25 ventricular fast conduction system - ZFIN:ZDB-PUB-120927-27 + ZFIN:ZDB-PUB-120927-27 @@ -61154,7 +61198,7 @@ The epithelium exists before becoming folded into the rosette. Wide thin-walled blood vessels in the liver. The terminal branches of the hepatic portal vein and hepatic artery empty into the sinusoids where the blood mixes. In mammals they have neither venous or arterial markers. Sinusoids are scattered throughout the parenchyma and appear small and round. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-090422-17 + ZFIN:ZDB-PUB-090422-17 @@ -61377,7 +61421,7 @@ The epithelium exists before becoming folded into the rosette. Artery that is positioned in the intraray mesenchyme between the hemirays of the lepidotrichia. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-031119-3 + ZFIN:ZDB-PUB-031119-3 @@ -61411,7 +61455,7 @@ The epithelium exists before becoming folded into the rosette. Vein that flanks and is just lateral to the fin ray, in the interray mesenchyme. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-031119-3 + ZFIN:ZDB-PUB-031119-3 @@ -61579,7 +61623,7 @@ The epithelium exists before becoming folded into the rosette. GOC:cvs ORCiD:0000-0002-2244-7917 ZFIN:ZDB-PUB-120529-43 - ZFIN:ZDB-PUB-130218-10 + ZFIN:ZDB-PUB-130218-10 @@ -61719,7 +61763,7 @@ The epithelium exists before becoming folded into the rosette. Tract that originates in the telencephalon lies medial to the lateral forebrain bundle and extends into the diencephalon approaching the posterior tuberal nucleus. In embryos the tract connects cells in the ventral olfactory bulb to those in the septal area. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-071219-12 + ZFIN:ZDB-PUB-071219-12 ZFIN:ZDB-PUB-961014-1280 @@ -61747,7 +61791,7 @@ The epithelium exists before becoming folded into the rosette. - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) TAO:0005112 dorsal lateral lines zebrafish_anatomy @@ -61757,9 +61801,10 @@ The epithelium exists before becoming folded into the rosette. - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 + ZFIN:ZDB-PUB-070907-34 @@ -62432,7 +62477,7 @@ The epithelium exists before becoming folded into the rosette. tunica serosa - http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html + http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html @@ -65613,7 +65658,7 @@ This may be the same as CoBL. Is a specialized pore forming cell of the follicle, located adjacent to the animal pole of the oocyte. The micropylar cell makes the single micropyle (pore) through the chorion through which the sperm fertilizes the egg. - ZFIN:ZDB-PUB-080630-14 + ZFIN:ZDB-PUB-080630-14 @@ -65724,7 +65769,7 @@ This may be the same as CoBL. A ciliated epithelial cell with many cilia. - CL:Curator + CL:Curator @@ -80354,6 +80399,7 @@ This may be the same as CoBL. 2013-09-30T03:31:51Z zebrafish_anatomy ZFA:0005768 + trigeminal sensory neuron @@ -80400,7 +80446,7 @@ This may be the same as CoBL. A male germ cell that develops from the haploid secondary spermatocytes. Without further division, spermatids undergo structural changes and give rise to spermatozoa. - CL:editor + CL:editor @@ -80420,6 +80466,7 @@ This may be the same as CoBL. 2013-11-05T11:05:25Z zebrafish_anatomy ZFA:0005770 + crypt neuron olfactory support cell @@ -80522,6 +80569,7 @@ This may be the same as CoBL. CL:0002546 zebrafish_anatomy ZFA:0005773 + embryonic blood vessel endothelial progenitor cell @@ -80583,6 +80631,7 @@ This may be the same as CoBL. CL:0007011 zebrafish_anatomy ZFA:0005775 + enteric neuron @@ -80610,6 +80659,7 @@ This may be the same as CoBL. CL:0011102 zebrafish_anatomy ZFA:0005776 + parasympathetic neuron @@ -80637,6 +80687,7 @@ This may be the same as CoBL. CL:0011103 zebrafish_anatomy ZFA:0005777 + sympathetic neuron @@ -80659,6 +80710,7 @@ This may be the same as CoBL. zebrafish_anatomy orexin secreting neuron ZFA:0005778 + hypocretin-secreting neuron @@ -80854,6 +80906,7 @@ This may be the same as CoBL. CL:0000737 zebrafish_anatomy ZFA:0005784 + striated muscle cell @@ -80956,6 +81009,7 @@ This may be the same as CoBL. 2014-03-25T09:31:29Z zebrafish_anatomy ZFA:0005786 + cleft cell @@ -83488,7 +83542,7 @@ this previously described vessel is connected to, or derived from, the FL networ Lymph vessels within the ovary. These vessels are located in the interstitium between ovarian follicles and appear to envelop arterioles. GOC:CVS ORCID:0000-0002-2244-7917 - ZFIN:ZDB-PUB-130218-10 + ZFIN:ZDB-PUB-130218-10 @@ -83572,6 +83626,7 @@ this previously described vessel is connected to, or derived from, the FL networ 2016-01-12T10:33:08Z zebrafish_anatomy ZFA:0005865 + reticulospinal neuron @@ -83595,6 +83650,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy V ZFA:0005866 + vestibulospinal neuron @@ -83865,7 +83921,7 @@ this previously described vessel is connected to, or derived from, the FL networ A neuron that releases norephinephrine (noradrenaline) as a neurotransmitter. - CL:Curator + CL:Curator @@ -83885,6 +83941,7 @@ this previously described vessel is connected to, or derived from, the FL networ 2016-03-23T01:14:15Z zebrafish_anatomy ZFA:0005874 + spiral neuron @@ -84023,6 +84080,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0000024 zebrafish_anatomy ZFA:0005878 + oogonia @@ -84753,7 +84811,7 @@ this previously described vessel is connected to, or derived from, the FL networ The initial growth point of the scale. In zebrafish the focus is on the anterior edge of the scale. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-180311-2 + ZFIN:ZDB-PUB-180311-2 @@ -84788,7 +84846,7 @@ this previously described vessel is connected to, or derived from, the FL networ Grooves on the scale radiating from the focus. Zebrafish have primary radii that start at the focus and extend to the posterior margin of the scale. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-180311-2 + ZFIN:ZDB-PUB-180311-2 @@ -84967,7 +85025,7 @@ this previously described vessel is connected to, or derived from, the FL networ Cartilaginous protrusion on the posterodorsal region of Meckel's cartilage. The coronoid process of Meckel's cartilage forms the dorsal portion of the articulation with the anteroventral corner of the palatoquadrate. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-060724-1 + ZFIN:ZDB-PUB-060724-1 ZFIN:ZDB-PUB-161203-3 @@ -85008,7 +85066,7 @@ this previously described vessel is connected to, or derived from, the FL networ Thread-like fibrous aggregation of secreted molecules extending from the subcommissural organ (SCO) through the ventricular system and central canal to the end of the spinal cord. GOC:cvs ISBN:978-0471888895 - ZFIN:ZDB-PUB-980205-16 + ZFIN:ZDB-PUB-980205-16 @@ -85091,8 +85149,8 @@ this previously described vessel is connected to, or derived from, the FL networ Region the larval brain that is a forerunner of the adult central and superficial pretectal regions. This region is non ventricular neural proliferation zone. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-030115-8 - ZFIN:ZDB-PUB-990406-3 + ZFIN:ZDB-PUB-030115-8 + ZFIN:ZDB-PUB-990406-3 @@ -85135,8 +85193,8 @@ this previously described vessel is connected to, or derived from, the FL networ Region that gives rise to various caudal tubercular structures in the preglomerular region This region is non ventricular neural proliferation zone and doesn't express GABA. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-020912-2 - ZFIN:ZDB-PUB-030115-8 + ZFIN:ZDB-PUB-020912-2 + ZFIN:ZDB-PUB-030115-8 @@ -85154,7 +85212,7 @@ this previously described vessel is connected to, or derived from, the FL networ preglomerular anlagen - ZFIN:ZDB-PUB-020912-2 + ZFIN:ZDB-PUB-020912-2 @@ -85187,7 +85245,7 @@ this previously described vessel is connected to, or derived from, the FL networ Portion of tissue that is presumed to give rise to the entopenduncular nucleus. - ZFIN:ZDB-PUB-040304-8 + ZFIN:ZDB-PUB-040304-8 ZFIN:ZDB-PUB-090914-27 @@ -85368,7 +85426,7 @@ this previously described vessel is connected to, or derived from, the FL networ Layer of melanophores that are positioned behind the argenta. The melanophore layer absorbs unfocused light preventing it from reaching the retina. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-180822-3 + ZFIN:ZDB-PUB-180822-3 @@ -85403,7 +85461,7 @@ this previously described vessel is connected to, or derived from, the FL networ Iridophore layer that forms along the dorsal region of the poster segment of the eye. The tapetum is formed by a single layer of Iridophores and is proximal to the photoreceptors and is located in the choroid. The tapetum reflects photons back to the photoreceptors if they were not initially absorbed by the photoreceptors. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-180822-3 + ZFIN:ZDB-PUB-180822-3 @@ -85449,7 +85507,7 @@ this previously described vessel is connected to, or derived from, the FL networ Neuromast where the paired hair cells are polarized along the dorsal-ventral body axis. GOC:cvs ORCiD:0000-0002-2244-7917 - ZFIN:ZDB-PUB-061205-16 + ZFIN:ZDB-PUB-061205-16 @@ -85894,7 +85952,7 @@ this previously described vessel is connected to, or derived from, the FL networ Nonhierarchical network of interconnected vessels. May be the primitive state of a mature vascular structure. GOC:cvs ORCID:0000-0002-2244-7917 - ZFIN:ZDB-PUB-150418-3 + ZFIN:ZDB-PUB-150418-3 @@ -85923,7 +85981,7 @@ this previously described vessel is connected to, or derived from, the FL networ GOC:cvs ORCID:0000-0002-2244-7917 PMID:23799579 - ZFIN:ZDB-PUB-150418-3 + ZFIN:ZDB-PUB-150418-3 @@ -85948,7 +86006,7 @@ this previously described vessel is connected to, or derived from, the FL networ GOC:cvs ORCID:0000-0002-2244-7917 PMID:23799579 - ZFIN:ZDB-PUB-150418-3 + ZFIN:ZDB-PUB-150418-3 @@ -85977,8 +86035,8 @@ this previously described vessel is connected to, or derived from, the FL networ Non stereotyped venous plexus derived from specialised angioblast that originate in the floor of the posterior cardinal vein. Emerges from the duct of Cuvier at 2dpf as a reticular structure that spreads bilaterally over the surface of the yolk and gut. GOC:cvs ORCID:0000-0002-2244-7917 - ZFIN:ZDB-PUB-150418-3 - ZFIN:ZDB-PUB-151021-20 + ZFIN:ZDB-PUB-150418-3 + ZFIN:ZDB-PUB-151021-20 ZFIN:ZDB-PUB-151104-9 @@ -86009,7 +86067,7 @@ this previously described vessel is connected to, or derived from, the FL networ Subintestinal venous plexus that wraps the yolk. Anterior vessels connected to both the left and right subintestinal vein drain into the liver. These vessels are reabsorbed after the yolk is depleted. GOC:cvs ORCID:0000-0002-2244-7917 - ZFIN:ZDB-PUB-150418-3 + ZFIN:ZDB-PUB-150418-3 @@ -86038,7 +86096,7 @@ this previously described vessel is connected to, or derived from, the FL networ Plexus that wraps the anterior digestive system. These vessels form the permanent, superficial vessels of the digestive system. The left subintestinal vein regresses and empties into the right subintestinal vein. GOC:cvs ORCID:0000-0002-2244-7917 - ZFIN:ZDB-PUB-151021-20 + ZFIN:ZDB-PUB-151021-20 @@ -86100,7 +86158,7 @@ this previously described vessel is connected to, or derived from, the FL networ Blood vessel that bridge between organs. GOC:cvs ORCID:0000-0002-2244-7917 - ZFIN:ZDB-PUB-130710-65 + ZFIN:ZDB-PUB-130710-65 @@ -86122,7 +86180,7 @@ this previously described vessel is connected to, or derived from, the FL networ Blood vessels that bridge between the liver and pancreas. Four of these vessels have been described, called V1 LP-V4LP. The vessels may be transient or permanent and may make direct or indirect connections between the organ vasculature. GOC:cvs ORCID:0000-0002-2244-7917 - ZFIN:ZDB-PUB-130710-65 + ZFIN:ZDB-PUB-130710-65 @@ -86143,7 +86201,7 @@ this previously described vessel is connected to, or derived from, the FL networ Temporary regenerating structure composed of chondrocytes and fibroblast that stabilizes the bone ends at a fracture site. The fibrocartilagionous callus surrounds the bone ends. GOC:cvs ORCID:0000-0002-2244-7917 - ZFIN:ZDB-PUB-190807-16 + ZFIN:ZDB-PUB-190807-16 @@ -86180,7 +86238,7 @@ this previously described vessel is connected to, or derived from, the FL networ - Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes . + Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes . ceriv 2021-01-27T10:44:40Z zebrafish_anatomy @@ -86191,7 +86249,7 @@ this previously described vessel is connected to, or derived from, the FL networ - Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes . + Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes . GOC:cvs ORCID:0000-0002-1009-339X ORCID:0000-0002-2244-7917 @@ -86200,6 +86258,26 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance. + ceriv + 2021-03-25T15:52:05Z + zebrafish_anatomy + ZFA:0005943 + perivitelline fluid + + + + + Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance. + ZFIN:ZDB-PUB-200910-2 + + + + @@ -86236,6 +86314,401 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + + + + + + Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus. + 2021-07-09T09:06:25Z + red-sensitive cone cell + zebrafish_anatomy + unequal double cone cell + ZFA:0005945 + + long double cone cell + + + + + Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + red-sensitive cone cell + ZFIN:ZDB-PUB-990520-1 + + + + + unequal double cone cell + ZFIN:ZDB-PUB-961014-677 + + + + + + + + + + + + + + + Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus. + ceriv + 2021-07-09T10:53:10Z + green-sensitive cone + zebrafish_anatomy + unequal double cone cell + ZFA:0005946 + + short double cone cell + + + + + Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + green-sensitive cone + ZFIN:ZDB-PUB-990520-1 + + + + + unequal double cone cell + ZFIN:ZDB-PUB-961014-677 + + + + + + + + + Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells. + ceriv + 2021-07-09T11:01:04Z + blue-sensitive cone cell + zebrafish_anatomy + ZFA:0005947 + + long single cone cell + + + + + Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + blue-sensitive cone cell + ZFIN:ZDB-PUB-990520-1 + + + + + + + + + Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs. + ceriv + 2021-07-09T11:10:25Z + UV-sensitive cone + ultraviolet-sensitive cone + zebrafish_anatomy + ZFA:0005948 + + short single cone cell + + + + + Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + UV-sensitive cone + ZFIN:ZDB-PUB-990520-1 + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the heart. + 2021-08-13T11:47:35Z + zebrafish_anatomy + ZFA:0005949 + heart lymph vessel + + + + + Lymph vessel located in the heart. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition. + ceriv + 2021-08-13T11:53:55Z + outflow tract lymph vessel + zebrafish_anatomy + ZFA:0005950 + bulbus arteriosus lymph vessel + + + + + Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels. + ceriv + 2021-08-13T11:58:24Z + zebrafish_anatomy + ZFA:0005951 + cardiac ventricle lymph vessel + + + + + Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + Lymphatic system of the heart. + ceriv + 2021-08-13T12:23:44Z + zebrafish_anatomy + ZFA:0005952 + heart lymphatic system + + + + + Lymphatic system of the heart. + GOC:CVS + ORCID:0000-0002-2244-7917 + + + + + + + + + Capillary plexus that is located in the heart. + ceriv + 2021-08-13T12:26:17Z + zebrafish_anatomy + ZFA:0005953 + coronary capillary plexus + + + + + Capillary plexus that is located in the heart. + GOC:cvs + ORCID:0000-0002-2244-7917 + + + + + + + + + + + + + + + + + + + + + Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network. + ceriv + 2021-08-13T12:30:04Z + isolated lymph endothelial cells + zebrafish_anatomy + ZFA:0005954 + cardiac lymphatic endothelial cluster + + + + + Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage. + ceriv + 2021-08-13T12:53:02Z + zebrafish_anatomy + ZFA:0005955 + lymphatic endothelial cluster + + + + + Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + A stem cell that can give rise to cell types of the germ-line. + ceriv + 2021-08-13T13:44:39Z + CL:0000014 + zebrafish_anatomy + ZFA:0005956 + + germline stem cell + + + + + A stem cell that can give rise to cell types of the germ-line. + ORCID:0000-0002-4142-7153 + + + + + + + + + + + + + + + A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. + ceriv + 2021-08-13T13:47:16Z + CL:0000034 + zebrafish_anatomy + ZFA:0005957 + + stem cell + + + + + A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. + GOC:tfm + + + + @@ -89563,6 +90036,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory neural crest cells zebrafish_anatomy ZFA:0007084 + premigratory neural crest cell @@ -89655,6 +90129,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory neural crest cells zebrafish_anatomy ZFA:0007086 + migratory neural crest cell @@ -89751,6 +90226,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0002321 zebrafish_anatomy ZFA:0007089 + embryonic cell @@ -89785,6 +90261,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory cranial neural crest cells zebrafish_anatomy ZFA:0007090 + premigratory cranial neural crest cell @@ -89832,6 +90309,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory cranial neural crest cells zebrafish_anatomy ZFA:0007091 + migratory cranial neural crest cell @@ -89941,6 +90419,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory trunk neural crest cells zebrafish_anatomy ZFA:0007094 + premigratory trunk neural crest cell @@ -89988,6 +90467,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory trunk neural crest cells zebrafish_anatomy ZFA:0007095 + migratory trunk neural crest cell @@ -90571,6 +91051,7 @@ this previously described vessel is connected to, or derived from, the FL networ CSF-cNs zebrafish_anatomy ZFA:0007120 + cerebrospinal fluid contacting neuron @@ -90609,6 +91090,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy KA 2 ZFA:0007121 + ventral cerebrospinal fluid contacting neuron @@ -90646,6 +91128,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy <new synonym> ZFA:0007122 + epidermal stem cell @@ -90680,6 +91163,7 @@ this previously described vessel is connected to, or derived from, the FL networ ionocyte progenitor cells zebrafish_anatomy ZFA:0007123 + ionocyte progenitor cell @@ -90721,6 +91205,7 @@ this previously described vessel is connected to, or derived from, the FL networ keratinocyte progenitor cells zebrafish_anatomy ZFA:0007124 + keratinocyte progenitor cell @@ -99968,13 +100453,7 @@ this previously described vessel is connected to, or derived from, the FL networ - - - - - - - + A stem cell that can give rise to cell types of the body other than those of the germ-line. CL:0000723 TAO:0009307 @@ -99989,7 +100468,7 @@ this previously described vessel is connected to, or derived from, the FL networ A stem cell that can give rise to cell types of the body other than those of the germ-line. - GO:CJM + GO:cjm @@ -102575,6 +103054,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0011004 zebrafish_anatomy ZFA:0009401 + lens fiber cell @@ -102615,7 +103095,7 @@ this previously described vessel is connected to, or derived from, the FL networ Cell that is part of the heart valve. - CL:editor + CL:editor @@ -102657,11 +103137,12 @@ this previously described vessel is connected to, or derived from, the FL networ Endothelial cells that surround the heart valve extracellular matrix. ceriv 2020-12-08T09:48:24Z + heart valve endocardial cell zebrafish_anatomy VEC ZFA:0009404 - heart valve endothelial cells + heart valve endothelial cell @@ -102671,6 +103152,12 @@ this previously described vessel is connected to, or derived from, the FL networ ORCID:0000-0002-2244-7917 ZFIN:ZDB-PUB-191202-2 + + + + heart valve endocardial cell + ZFIN:ZDB-PUB-200221-32 + @@ -102698,7 +103185,7 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2430 zebrafish_stages ZFS:0000000 - Unknown + unknown @@ -102711,7 +103198,7 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2431 zebrafish_stages ZFS:0000001 - Zygote:1-cell + zygote:1-cell @@ -102720,11 +103207,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-15 ZFIN:ZDB-TERM-100331-2432 zebrafish_stages ZFS:0000002 - Cleavage:2-cell + cleavage:2-cell @@ -102733,11 +103226,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-11 ZFIN:ZDB-TERM-100331-2433 zebrafish_stages ZFS:0000003 - Cleavage:4-cell + cleavage:4-cell @@ -102746,11 +103245,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-33 ZFIN:ZDB-TERM-100331-2434 zebrafish_stages ZFS:0000004 - Cleavage:8-cell + cleavage:8-cell @@ -102759,11 +103264,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-20 ZFIN:ZDB-TERM-100331-2435 zebrafish_stages ZFS:0000005 - Cleavage:16-cell + cleavage:16-cell @@ -102772,11 +103283,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-25 ZFIN:ZDB-TERM-100331-2436 zebrafish_stages ZFS:0000006 - Cleavage:32-cell + cleavage:32-cell @@ -102785,11 +103302,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-28 ZFIN:ZDB-TERM-100331-2437 zebrafish_stages ZFS:0000007 - Cleavage:64-cell + cleavage:64-cell @@ -102798,11 +103321,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-7 ZFIN:ZDB-TERM-100331-2438 zebrafish_stages ZFS:0000008 - Blastula:128-cell + blastula:128-cell @@ -102811,11 +103340,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-1 ZFIN:ZDB-TERM-100331-2439 zebrafish_stages ZFS:0000009 - Blastula:256-cell + blastula:256-cell @@ -102824,11 +103359,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-14 ZFIN:ZDB-TERM-100331-2440 zebrafish_stages ZFS:0000010 - Blastula:512-cell + blastula:512-cell @@ -102837,11 +103378,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-22 ZFIN:ZDB-TERM-100331-2441 zebrafish_stages ZFS:0000011 - Blastula:1k-cell + blastula:1k-cell @@ -102850,11 +103397,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-27 ZFIN:ZDB-TERM-100331-2442 zebrafish_stages ZFS:0000012 - Blastula:High + blastula:high @@ -102863,11 +103416,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-24 ZFIN:ZDB-TERM-100331-2443 zebrafish_stages ZFS:0000013 - Blastula:Oblong + blastula:oblong @@ -102876,11 +103435,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-21 ZFIN:ZDB-TERM-100331-2444 zebrafish_stages ZFS:0000014 - Blastula:Sphere + blastula:sphere @@ -102889,11 +103454,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-19 ZFIN:ZDB-TERM-100331-2445 zebrafish_stages ZFS:0000015 - Blastula:Dome + blastula:dome @@ -102902,11 +103473,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-17 ZFIN:ZDB-TERM-100331-2446 zebrafish_stages ZFS:0000016 - Blastula:30%-epiboly + blastula:30%-epiboly @@ -102915,11 +103492,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-6 ZFIN:ZDB-TERM-100331-2447 zebrafish_stages ZFS:0000017 - Gastrula:50%-epiboly + gastrula:50%-epiboly @@ -102928,11 +103511,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-3 ZFIN:ZDB-TERM-100331-2448 zebrafish_stages ZFS:0000018 - Gastrula:Germ-ring + gastrula:germ-ring @@ -102941,11 +103530,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-2 ZFIN:ZDB-TERM-100331-2449 zebrafish_stages ZFS:0000019 - Gastrula:Shield + gastrula:shield @@ -102954,11 +103549,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-18 ZFIN:ZDB-TERM-100331-2450 zebrafish_stages ZFS:0000020 - Gastrula:75%-epiboly + gastrula:75%-epiboly @@ -102967,11 +103568,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-29 ZFIN:ZDB-TERM-100331-2451 zebrafish_stages ZFS:0000021 - Gastrula:90%-epiboly + gastrula:90%-epiboly @@ -102980,11 +103587,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-12 ZFIN:ZDB-TERM-100331-2452 zebrafish_stages ZFS:0000022 - Gastrula:Bud + gastrula:bud @@ -102993,11 +103606,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-23 ZFIN:ZDB-TERM-100331-2453 zebrafish_stages ZFS:0000023 - Segmentation:1-4 somites + segmentation:1-4 somites @@ -103006,11 +103625,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-5 ZFIN:ZDB-TERM-100331-2454 zebrafish_stages ZFS:0000024 - Segmentation:5-9 somites + segmentation:5-9 somites @@ -103019,11 +103644,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-020626-1 ZFIN:ZDB-TERM-100331-2455 zebrafish_stages ZFS:0000025 - Segmentation:10-13 somites + segmentation:10-13 somites @@ -103032,11 +103663,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-30 ZFIN:ZDB-TERM-100331-2456 zebrafish_stages ZFS:0000026 - Segmentation:14-19 somites + segmentation:14-19 somites @@ -103045,11 +103682,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-16 ZFIN:ZDB-TERM-100331-2457 zebrafish_stages ZFS:0000027 - Segmentation:20-25 somites + segmentation:20-25 somites @@ -103058,11 +103701,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-34 ZFIN:ZDB-TERM-100331-2458 zebrafish_stages ZFS:0000028 - Segmentation:26+ somites + segmentation:26+ somites @@ -103071,11 +103720,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-10 ZFIN:ZDB-TERM-100331-2439 zebrafish_stages ZFS:0000029 - Pharyngula:Prim-5 + pharyngula:prim-5 @@ -103084,11 +103739,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-32 ZFIN:ZDB-TERM-100331-2460 zebrafish_stages ZFS:0000030 - Pharyngula:Prim-15 + pharyngula:prim-15 @@ -103097,11 +103758,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-13 ZFIN:ZDB-TERM-100331-2461 zebrafish_stages ZFS:0000031 - Pharyngula:Prim-25 + pharyngula:prim-25 @@ -103110,11 +103777,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-31 ZFIN:ZDB-TERM-100331-2462 zebrafish_stages ZFS:0000032 - Pharyngula:High-pec + pharyngula:high-pec @@ -103123,11 +103796,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-9 ZFIN:ZDB-TERM-100331-2463 zebrafish_stages ZFS:0000033 - Hatching:Long-pec + hatching:long-pec @@ -103136,11 +103815,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-26 ZFIN:ZDB-TERM-100331-2464 zebrafish_stages ZFS:0000034 - Hatching:Pec-fin + hatching:pec-fin @@ -103149,11 +103834,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-8 ZFIN:ZDB-TERM-100331-2465 zebrafish_stages ZFS:0000035 - Larval:Protruding-mouth + larval:protruding-mouth @@ -103162,11 +103853,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-35 ZFIN:ZDB-TERM-100331-2466 zebrafish_stages ZFS:0000036 - Larval:Day 4 + larval:day 4 @@ -103175,11 +103872,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-36 ZFIN:ZDB-TERM-100331-2467 zebrafish_stages ZFS:0000037 - Larval:Day 5 + larval:day 5 @@ -103188,11 +103891,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-37 ZFIN:ZDB-TERM-100331-2468 zebrafish_stages ZFS:0000038 - Larval:Day 6 + larval:day 6 @@ -103201,11 +103910,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-47 ZFIN:ZDB-TERM-100331-2469 zebrafish_stages ZFS:0000039 - Larval:Days 7-13 + larval:days 7-13 @@ -103214,11 +103929,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-48 ZFIN:ZDB-TERM-100331-2470 zebrafish_stages ZFS:0000040 - Larval:Days 14-20 + larval:days 14-20 @@ -103227,11 +103948,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-49 ZFIN:ZDB-TERM-100331-2471 zebrafish_stages ZFS:0000041 - Larval:Days 21-29 + larval:days 21-29 @@ -103240,11 +103967,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-51 ZFIN:ZDB-TERM-100331-2472 zebrafish_stages ZFS:0000042 - Juvenile:Days 30-44 + juvenile:days 30-44 @@ -103253,11 +103986,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-52 ZFIN:ZDB-TERM-100331-2473 zebrafish_stages ZFS:0000043 - Juvenile:Days 45-89 + juvenile:days 45-89 @@ -103270,7 +104009,139 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2474 zebrafish_stages ZFS:0000044 - Adult + adult + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000045 + blastula + + + + + + + + + zebrafish_stages + ZFS:0000046 + cleavage + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000047 + gastrula + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000048 + larva + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000049 + segmentation + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000050 + pharyngula + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000051 + juvenile + + + + + + + + + + + + + + + yvonne + 2014-11-05T08:33:09Z + zebrafish_stages + ZFS:0007000 + hatching @@ -103280,7 +104151,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_stages ZFS:0100000 - Stages + zebrafish stage diff --git a/zfa-zfin.json b/zfa-zfin.json index 180d507..144f0f9 100644 --- a/zfa-zfin.json +++ b/zfa-zfin.json @@ -8,6 +8,11 @@ "pred": "inverseOf", "sub": "http://purl.obolibrary.org/obo/BFO_0000050" }, + { + "obj": "http://purl.obolibrary.org/obo/BFO_0000062", + "pred": "subPropertyOf", + "sub": "http://purl.obolibrary.org/obo/RO_0002087" + }, { "obj": "http://purl.obolibrary.org/obo/RO_0002131", "pred": "subPropertyOf", @@ -398,6 +403,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005075" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000009", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000010", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -628,6 +638,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0000329" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000020", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005943" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000022", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -3608,6 +3623,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005068" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000173", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000175", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -5238,6 +5258,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005658" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000385", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005955" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000386", "pred": "is_a", @@ -24503,6 +24528,16 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005814" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005811", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005952" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005811", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005953" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0005818", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -24833,6 +24868,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005862" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005844", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0005844", "pred": "is_a", @@ -25353,6 +25393,41 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0009181" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005949", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005949", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005952", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005952", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005955", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005957", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005956" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005957", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0006000", "pred": "http://purl.obolibrary.org/obo/RO_0002202", @@ -26333,6 +26408,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005944" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", "pred": "is_a", @@ -26668,11 +26748,6 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0009306" }, - { - "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", - "pred": "is_a", - "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" - }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", "pred": "is_a", @@ -29113,6 +29188,26 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005929" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005947" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005948" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009265", "pred": "http://purl.obolibrary.org/obo/RO_0002202", @@ -35708,6 +35803,46 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005941" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005942" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005947" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005948" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005952" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005953" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005955" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005956" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -38628,6 +38763,11 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005772" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000001", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005943" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000001", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -44593,6 +44733,11 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0005738" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000032", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005943" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -45058,6 +45203,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005926" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -48818,6 +48973,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005800" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -49108,6 +49273,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005769" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -58323,11 +58498,81 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0005941" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005942" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0005944" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005947" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005948" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005952" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005953" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005955" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005956" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", "pred": "http://purl.obolibrary.org/obo/RO_0002497", @@ -60453,6 +60698,251 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0009404" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000008" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000009" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000010" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000011" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000012" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000013" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000014" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000015" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000016" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000045", + "pred": 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"http://purl.obolibrary.org/obo/ZFS_0000020" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000021" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000022" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000047", + "pred": "http://purl.obolibrary.org/obo/RO_0002087", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000049" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000048", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000035" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000048", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000036" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000048", + "pred": 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"http://purl.obolibrary.org/obo/ZFS_0000028" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000049", + "pred": "http://purl.obolibrary.org/obo/RO_0002087", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000050" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000050", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000029" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000050", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000030" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000050", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000031" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000050", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000032" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000050", + "pred": "http://purl.obolibrary.org/obo/RO_0002087", + "sub": "http://purl.obolibrary.org/obo/ZFS_0007000" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000051", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000042" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000051", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000043" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0007000", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000033" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0007000", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000034" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0007000", + "pred": "http://purl.obolibrary.org/obo/RO_0002087", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000048" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", "pred": "is_a", @@ -60677,6 +61167,46 @@ "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFS_0000044" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000045" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000046" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000047" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000048" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000049" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000050" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000051" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0007000" } ], "equivalentNodesSets": [], @@ -60684,6 +61214,14 @@ "logicalDefinitionAxioms": [], "meta": { "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/IAO_0000700", + "val": "http://purl.obolibrary.org/obo/ZFA_0100000" + }, + { + "pred": "http://purl.obolibrary.org/obo/IAO_0000700", + "val": "http://purl.obolibrary.org/obo/ZFS_0100000" + }, { "pred": "http://purl.org/dc/elements/1.1/description", "val": "ZFA description." @@ -60698,11 +61236,11 @@ }, { "pred": "http://www.geneontology.org/formats/oboInOwl#auto-generated-by", - "val": "OBO-Edit 2.3.1" + "val": "OBO-Edit 2.3-beta5" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#date", - "val": "08:03:2021 11:16" + "val": "29:11:2022 16:29" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#default-namespace", @@ -60714,7 +61252,7 @@ }, { "pred": "http://www.geneontology.org/formats/oboInOwl#saved-by", - "val": "ceriv" + "val": "zfinf" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-genus-differentia", @@ -60732,17 +61270,13 @@ "pred": "http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-genus-differentia", "val": "VSAO part_of NCBITaxon:7955" }, - { - "pred": "http://www.w3.org/2000/01/rdf-schema#comment", - "val": "SVN version: $Revision: 1.100$" - }, { "pred": "http://www.w3.org/2002/07/owl#versionInfo", - "val": "2022-03-15" + "val": "2022-12-09" } ], "subsets": [], - "version": "http://purl.obolibrary.org/obo/zfa/releases/2022-03-15/zfa-zfin.json", + "version": "http://purl.obolibrary.org/obo/zfa/releases/2022-12-09/zfa-zfin.json", "xrefs": [] }, "nodes": [ @@ -60790,6 +61324,62 @@ }, "type": "PROPERTY" }, + { + "id": "http://purl.obolibrary.org/obo/BFO_0000062", + "lbl": "preceded_by", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomical_ontology" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val": "preceded_by" + } + ], + "definition": { + "val": "X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X).", + "xrefs": [ + "goc:cjm" + ] + }, + "xrefs": [ + { + "val": "BFO:0000062" + } + ] + }, + "type": "PROPERTY" + }, + { + "id": "http://purl.obolibrary.org/obo/RO_0002087", + "lbl": "immediately_preceded_by", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomical_ontology" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val": "immediately_preceded_by" + } + ], + "definition": { + "val": "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y).", + "xrefs": [ + "goc:cjm" + ] + }, + "xrefs": [ + { + "val": "RO:0002087" + } + ] + }, + "type": "PROPERTY" + }, { "id": "http://purl.obolibrary.org/obo/RO_0002131", "lbl": "overlaps", @@ -66860,7 +67450,7 @@ }, { "pred": "hasExactSynonym", - "val": "corpus cerebelli granular layer ", + "val": "corpus cerebelli granular layer", "xrefs": [ "ZFIN:ZDB-PUB-961014-1280" ] @@ -69197,7 +69787,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -70077,7 +70667,7 @@ "synonyms": [ { "pred": "hasExactSynonym", - "val": "flexor caudalis dorsalis superioris ", + "val": "flexor caudalis dorsalis superioris", "xrefs": [] }, { @@ -71955,7 +72545,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -73584,7 +74174,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -74344,7 +74934,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -74939,7 +75529,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:JCN 421-:189-198" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -75223,7 +75813,7 @@ }, { "pred": "hasExactSynonym", - "val": "upper semilunar valve ", + "val": "upper semilunar valve", "xrefs": [ "ZFIN:ZDB-PUB-060921-12" ] @@ -75653,7 +76243,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -76721,7 +77311,7 @@ }, { "pred": "hasExactSynonym", - "val": " dilatator opercula", + "val": "dilatator opercula", "xrefs": [] }, { @@ -77202,7 +77792,7 @@ }, { "pred": "hasRelatedSynonym", - "val": "tuberculum impar of Herrick ", + "val": "tuberculum impar of Herrick", "xrefs": [] } ], @@ -77587,7 +78177,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -78422,7 +79012,7 @@ }, { "pred": "hasRelatedSynonym", - "val": "post-temporal ", + "val": "post-temporal", "xrefs": [] } ], @@ -79695,7 +80285,7 @@ }, { "pred": "hasExactSynonym", - "val": "octaval ganglion ", + "val": "octaval ganglion", "xrefs": [] }, { @@ -80016,7 +80606,7 @@ "synonyms": [ { "pred": "hasExactSynonym", - "val": "semicircular torus ", + "val": "semicircular torus", "xrefs": [] } ], @@ -80303,7 +80893,7 @@ }, { "pred": "hasExactSynonym", - "val": "transversus ventralis ", + "val": "transversus ventralis", "xrefs": [] } ], @@ -86629,7 +87219,7 @@ } ], "definition": { - "val": "Portion of somite 16 that gives rise to body wall muscle masses.", + "val": "Portion of somite 26 that gives rise to body wall muscle masses.", "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", @@ -90899,10 +91489,11 @@ } ], "definition": { - "val": "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", + "val": "One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", "xrefs": [ "GOC:ymb", - "ORCiD:0000-0002-9900-7880" + "ORCiD:0000-0002-9900-7880", + "ZFIN:ZDB-PUB-110811-14" ] }, "synonyms": [ @@ -90910,6 +91501,16 @@ "pred": "hasExactSynonym", "val": "pll", "xrefs": [] + }, + { + "pred": "hasRelatedSynonym", + "val": "midbody lateral line", + "xrefs": [] + }, + { + "pred": "hasRelatedSynonym", + "val": "midtrunk line", + "xrefs": [] } ], "xrefs": [ @@ -102193,7 +102794,7 @@ "pred": "hasRelatedSynonym", "val": "tunica muscularis", "xrefs": [ - "http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" + "http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" ] } ], @@ -118512,10 +119113,11 @@ } ], "definition": { - "val": "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", + "val": "One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", "xrefs": [ "GOC:ymb", - "ORCiD:0000-0002-9900-7880" + "ORCiD:0000-0002-9900-7880", + "ZFIN:ZDB-PUB-070907-34" ] }, "synonyms": [ @@ -119128,7 +119730,7 @@ "pred": "hasRelatedSynonym", "val": "tunica serosa", "xrefs": [ - "http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" + "http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" ] } ], @@ -141775,7 +142377,10 @@ "xrefs": [ "ZFIN:ZDB-PUB-120106-15" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -141839,7 +142444,10 @@ "ORCiD:0000-0002-2244-7917", "ZFIN:ZDB-PUB-060724-7" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -141934,6 +142542,9 @@ "GOC:tjm" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0002546" @@ -141995,6 +142606,9 @@ "CL:MAH" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0007011" @@ -142027,6 +142641,9 @@ "ISBN:0080923437" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011102" @@ -142059,6 +142676,9 @@ "ISBN:0080923437" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011103" @@ -142091,6 +142711,9 @@ "PMID:23848055" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -142274,6 +142897,9 @@ "ISBN:0721662544" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0000737" @@ -142343,7 +142969,10 @@ "ORCiD:0000-0002-2244-7917", "ZFIN:ZDB-PUB-961014-195" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -145057,7 +145686,10 @@ "ORCID:0000-0002-2244-7917", "ZFIN:ZDB-PUB-961014-594" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -145085,6 +145717,9 @@ "ZFIN:ZDB-PUB-961014-572" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -145348,7 +145983,10 @@ "ZFIN:ZDB-PUB-110110-13", "ZFIN:ZDB-PUB-150512-4" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -145492,6 +146130,9 @@ "ZFIN:ZDB-PUB-120718-30" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0000024" @@ -147712,7 +148353,7 @@ } ], "definition": { - "val": "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes .", + "val": "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes .", "xrefs": [ "GOC:cvs", "ORCID:0000-0002-1009-339X", @@ -147726,6 +148367,33 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005943", + "lbl": "perivitelline fluid", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-03-25T15:52:05Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Extraembryonic fluid that fills the space between the embryo and the chorion. 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The double cone cells have membrane projections at the level of the lobed nucleus.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "red-sensitive cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasRelatedSynonym", + "val": "unequal double cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-961014-677" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005946", + "lbl": "short double cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T10:53:10Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. 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The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "UV-sensitive cone", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasExactSynonym", + "val": "ultraviolet-sensitive cone", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005949", + "lbl": "heart lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:47:35Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the heart.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005950", + "lbl": "bulbus arteriosus lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:53:55Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the bulbus arteriosus (outflow tract). 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The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005952", + "lbl": "heart lymphatic system", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:23:44Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymphatic system of the heart.", + "xrefs": [ + "GOC:CVS", + "ORCID:0000-0002-2244-7917" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005953", + "lbl": "coronary capillary plexus", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:26:17Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Capillary plexus that is located in the heart.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005954", + "lbl": "cardiac lymphatic endothelial cluster", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:30:04Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + }, + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "isolated lymph endothelial cells", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005955", + "lbl": "lymphatic endothelial cluster", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:53:02Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005956", + "lbl": "germline stem cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T13:44:39Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "A stem cell that can give rise to cell types of the germ-line.", + "xrefs": [ + "ORCID:0000-0002-4142-7153" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "xrefs": [ + { + "val": "CL:0000014" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005957", + "lbl": "stem cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T13:47:16Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.", + "xrefs": [ + "GOC:tfm" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "xrefs": [ + { + "val": "CL:0000034" + } + ] + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFA_0006000", "lbl": "intermediate hypothalamus", @@ -150516,6 +151648,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150585,6 +151720,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150681,6 +151819,9 @@ "CL:curator" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0002321" @@ -150714,6 +151855,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150750,6 +151894,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150847,6 +151994,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150883,6 +152033,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151621,6 +152774,9 @@ "ZFIN:ZDB-PUB-170409-2" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151667,6 +152823,9 @@ "ZFIN:ZDB-PUB-170409-2" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151717,6 +152876,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -151758,6 +152920,9 @@ "ZFIN:ZDB-PUB-190402-19" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151795,6 +152960,9 @@ "ZFIN:ZDB-PUB-190402-19" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -163076,7 +164244,7 @@ "definition": { "val": "A stem cell that can give rise to cell types of the body other than those of the germ-line.", "xrefs": [ - "GO:CJM" + "GO:cjm" ] }, "subsets": [ @@ -166608,6 +167776,9 @@ "GOC:nv" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011004" @@ -166694,7 +167865,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFA_0009404", - "lbl": "heart valve endothelial cells", + "lbl": "heart valve endothelial cell", "meta": { "basicPropertyValues": [ { @@ -166722,6 +167893,13 @@ "http://purl.obolibrary.org/obo/zfa#cell_slim" ], "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "heart valve endocardial cell", + "xrefs": [ + "ZFIN:ZDB-PUB-200221-32" + ] + }, { "pred": "hasRelatedSynonym", "val": "VEC", @@ -166748,7 +167926,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000000", - "lbl": "Unknown", + "lbl": "unknown", "meta": { "basicPropertyValues": [ { @@ -166769,7 +167947,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000001", - "lbl": "Zygote:1-cell", + "lbl": "zygote:1-cell", "meta": { "basicPropertyValues": [ { @@ -166790,7 +167968,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000002", - "lbl": "Cleavage:2-cell", + "lbl": "cleavage:2-cell", "meta": { "basicPropertyValues": [ { @@ -166811,7 +167989,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000003", - "lbl": "Cleavage:4-cell", + "lbl": "cleavage:4-cell", "meta": { "basicPropertyValues": [ { @@ -166832,7 +168010,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000004", - "lbl": "Cleavage:8-cell", + "lbl": "cleavage:8-cell", "meta": { "basicPropertyValues": [ { @@ -166853,7 +168031,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000005", - "lbl": "Cleavage:16-cell", + "lbl": "cleavage:16-cell", "meta": { "basicPropertyValues": [ { @@ -166874,7 +168052,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000006", - "lbl": "Cleavage:32-cell", + "lbl": "cleavage:32-cell", "meta": { "basicPropertyValues": [ { @@ -166895,7 +168073,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000007", - "lbl": "Cleavage:64-cell", + "lbl": "cleavage:64-cell", "meta": { "basicPropertyValues": [ { @@ -166916,7 +168094,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000008", - "lbl": "Blastula:128-cell", + "lbl": "blastula:128-cell", "meta": { "basicPropertyValues": [ { @@ -166937,7 +168115,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000009", - "lbl": "Blastula:256-cell", + "lbl": "blastula:256-cell", "meta": { "basicPropertyValues": [ { @@ -166958,7 +168136,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000010", - "lbl": "Blastula:512-cell", + "lbl": "blastula:512-cell", "meta": { "basicPropertyValues": [ { @@ -166979,7 +168157,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000011", - "lbl": "Blastula:1k-cell", + "lbl": "blastula:1k-cell", "meta": { "basicPropertyValues": [ { @@ -167000,7 +168178,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000012", - "lbl": "Blastula:High", + "lbl": "blastula:high", "meta": { "basicPropertyValues": [ { @@ -167021,7 +168199,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000013", - "lbl": "Blastula:Oblong", + "lbl": "blastula:oblong", "meta": { "basicPropertyValues": [ { @@ -167042,7 +168220,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000014", - "lbl": "Blastula:Sphere", + "lbl": "blastula:sphere", "meta": { "basicPropertyValues": [ { @@ -167063,7 +168241,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000015", - "lbl": "Blastula:Dome", + "lbl": "blastula:dome", "meta": { "basicPropertyValues": [ { @@ -167084,7 +168262,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000016", - "lbl": "Blastula:30%-epiboly", + "lbl": "blastula:30%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167105,7 +168283,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000017", - "lbl": "Gastrula:50%-epiboly", + "lbl": "gastrula:50%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167126,7 +168304,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000018", - "lbl": "Gastrula:Germ-ring", + "lbl": "gastrula:germ-ring", "meta": { "basicPropertyValues": [ { @@ -167147,7 +168325,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000019", - "lbl": "Gastrula:Shield", + "lbl": "gastrula:shield", "meta": { "basicPropertyValues": [ { @@ -167168,7 +168346,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000020", - "lbl": "Gastrula:75%-epiboly", + "lbl": "gastrula:75%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167189,7 +168367,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000021", - "lbl": "Gastrula:90%-epiboly", + "lbl": "gastrula:90%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167210,7 +168388,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000022", - "lbl": "Gastrula:Bud", + "lbl": "gastrula:bud", "meta": { "basicPropertyValues": [ { @@ -167231,7 +168409,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000023", - "lbl": "Segmentation:1-4 somites", + "lbl": "segmentation:1-4 somites", "meta": { "basicPropertyValues": [ { @@ -167252,7 +168430,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000024", - "lbl": "Segmentation:5-9 somites", + "lbl": "segmentation:5-9 somites", "meta": { "basicPropertyValues": [ { @@ -167273,7 +168451,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000025", - "lbl": "Segmentation:10-13 somites", + "lbl": "segmentation:10-13 somites", "meta": { "basicPropertyValues": [ { @@ -167294,7 +168472,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000026", - "lbl": "Segmentation:14-19 somites", + "lbl": "segmentation:14-19 somites", "meta": { "basicPropertyValues": [ { @@ -167315,7 +168493,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000027", - "lbl": "Segmentation:20-25 somites", + "lbl": "segmentation:20-25 somites", "meta": { "basicPropertyValues": [ { @@ -167336,7 +168514,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000028", - "lbl": "Segmentation:26+ somites", + "lbl": "segmentation:26+ somites", "meta": { "basicPropertyValues": [ { @@ -167357,7 +168535,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000029", - "lbl": "Pharyngula:Prim-5", + "lbl": "pharyngula:prim-5", "meta": { "basicPropertyValues": [ { @@ -167378,7 +168556,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000030", - "lbl": "Pharyngula:Prim-15", + "lbl": "pharyngula:prim-15", "meta": { "basicPropertyValues": [ { @@ -167399,7 +168577,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000031", - "lbl": "Pharyngula:Prim-25", + "lbl": "pharyngula:prim-25", "meta": { "basicPropertyValues": [ { @@ -167420,7 +168598,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000032", - "lbl": "Pharyngula:High-pec", + "lbl": "pharyngula:high-pec", "meta": { "basicPropertyValues": [ { @@ -167441,7 +168619,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000033", - "lbl": "Hatching:Long-pec", + "lbl": "hatching:long-pec", "meta": { "basicPropertyValues": [ { @@ -167462,7 +168640,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000034", - "lbl": "Hatching:Pec-fin", + "lbl": "hatching:pec-fin", "meta": { "basicPropertyValues": [ { @@ -167483,7 +168661,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000035", - "lbl": "Larval:Protruding-mouth", + "lbl": "larval:protruding-mouth", "meta": { "basicPropertyValues": [ { @@ -167504,7 +168682,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000036", - "lbl": "Larval:Day 4", + "lbl": "larval:day 4", "meta": { "basicPropertyValues": [ { @@ -167525,7 +168703,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000037", - "lbl": "Larval:Day 5", + "lbl": "larval:day 5", "meta": { "basicPropertyValues": [ { @@ -167546,7 +168724,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000038", - "lbl": "Larval:Day 6", + "lbl": "larval:day 6", "meta": { "basicPropertyValues": [ { @@ -167567,7 +168745,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000039", - "lbl": "Larval:Days 7-13", + "lbl": "larval:days 7-13", "meta": { "basicPropertyValues": [ { @@ -167588,7 +168766,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000040", - "lbl": "Larval:Days 14-20", + "lbl": "larval:days 14-20", "meta": { "basicPropertyValues": [ { @@ -167609,7 +168787,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000041", - "lbl": "Larval:Days 21-29", + "lbl": "larval:days 21-29", "meta": { "basicPropertyValues": [ { @@ -167630,7 +168808,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000042", - "lbl": "Juvenile:Days 30-44", + "lbl": "juvenile:days 30-44", "meta": { "basicPropertyValues": [ { @@ -167651,7 +168829,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000043", - "lbl": "Juvenile:Days 45-89", + "lbl": "juvenile:days 45-89", "meta": { "basicPropertyValues": [ { @@ -167672,7 +168850,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000044", - "lbl": "Adult", + "lbl": "adult", "meta": { "basicPropertyValues": [ { @@ -167691,9 +168869,121 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000045", + "lbl": "blastula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000046", + "lbl": "cleavage", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000047", + "lbl": "gastrula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000048", + "lbl": "larva", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000049", + "lbl": "segmentation", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000050", + "lbl": "pharyngula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000051", + "lbl": "juvenile", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0007000", + "lbl": "hatching", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "yvonne" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2014-11-05T08:33:09Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFS_0100000", - "lbl": "Stages", + "lbl": "zebrafish stage", "meta": { "basicPropertyValues": [ { diff --git a/zfa-zfin.obo b/zfa-zfin.obo index 74493c5..eb53226 100644 --- a/zfa-zfin.obo +++ b/zfa-zfin.obo @@ -1,8 +1,8 @@ format-version: 1.2 -data-version: zfa/releases/2022-03-15/zfa-zfin.owl -date: 08:03:2021 11:16 -saved-by: ceriv -auto-generated-by: OBO-Edit 2.3.1 +data-version: zfa/releases/2022-12-09/zfa-zfin.owl +date: 29:11:2022 16:29 +saved-by: zfinf +auto-generated-by: OBO-Edit 2.3-beta5 subsetdef: cell_slim "cell_slim" synonymtypedef: PLURAL "PLURAL" default-namespace: zebrafish_anatomical_ontology @@ -10,12 +10,13 @@ treat-xrefs-as-genus-differentia: CARO part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: CL part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: TAO part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: VSAO part_of NCBITaxon:7955 -remark: SVN version: $Revision: 1.100$ ontology: zfa/zfa-zfin property_value: http://purl.org/dc/elements/1.1/description "ZFA description." xsd:string property_value: http://purl.org/dc/elements/1.1/title "Zebrafish Anatomy Ontology (ZFA)" xsd:string property_value: http://purl.org/dc/terms/license https://creativecommons.org/licenses/by/3.0/ -property_value: owl:versionInfo "2022-03-15" xsd:string +property_value: IAO:0000700 ZFA:0100000 +property_value: IAO:0000700 ZFS:0100000 +property_value: owl:versionInfo "2022-12-09" xsd:string [Term] id: ZFA:0000000 @@ -24,8 +25,8 @@ namespace: zebrafish_anatomy def: "The visible division between epiblast and hypoblast in the gastrula." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000000 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000001 @@ -36,9 +37,9 @@ synonym: "ciliated organ of asymmetry" EXACT [ZFIN:ZDB-PUB-050221-4] xref: TAO:0000001 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000023 ! forerunner cell group -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000077 ! tail bud -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000003 @@ -50,9 +51,9 @@ synonym: "adaxial cells" EXACT PLURAL [] xref: CL:0007016 xref: TAO:0000003 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000279 ! segmental plate -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000004 @@ -62,9 +63,9 @@ def: "Anterior portion of the axial hypoblast." [GOC:cvs, GOC:ymb, ORCiD:0000-00 synonym: "pre-polster" EXACT [ZFIN:ZDB-PUB-051019-5] xref: TAO:0000004 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001378 ! axial hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000005 @@ -74,9 +75,9 @@ def: "Blood vessels that carry blood away from the heart." [GOC:cvs, ORCiD:0000- synonym: "arterial system" RELATED [] xref: TAO:0000005 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000006 @@ -86,9 +87,9 @@ def: "The anterior round region of the yolk cell present after the yolk extensio synonym: "yolk ball" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000006 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000084 ! yolk -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000007 @@ -97,9 +98,9 @@ namespace: zebrafish_anatomy def: "A complex mixture of cells suspended in a liquid matrix that delivers nutrients to cells and removes wastes." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000007 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000008 @@ -111,9 +112,9 @@ synonym: "brain structure" RELATED [] xref: TAO:0000008 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001135 ! neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000009 @@ -124,9 +125,9 @@ synonym: "ventricle" EXACT [] xref: TAO:0000009 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001719 ! presumptive cardiac ventricle heart tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000010 @@ -135,8 +136,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that functions in circulation and has as its parts the heart and vasculature. The lymphatic system is considered part of the cardiovascular system." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000010 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000011 @@ -146,10 +147,10 @@ def: "Extension of the dorsal aorta in the post-vent region." [GOC:cvs, ORCiD:00 synonym: "CA" EXACT [] xref: TAO:0000011 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000012 @@ -160,8 +161,8 @@ synonym: "cns" EXACT [] xref: TAO:0000012 is_a: ZFA:0000396 ! nervous system relationship: develops_from ZFA:0000063 ! presumptive neural plate -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000013 @@ -172,8 +173,8 @@ synonym: "cranial ganglia" EXACT PLURAL [] synonym: "presumptive cranial ganglia" RELATED [] xref: TAO:0000013 is_a: ZFA:0000190 ! ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000014 @@ -185,10 +186,10 @@ synonym: "dorsal aortic root" EXACT [] xref: TAO:0000014 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005077 ! vascular cord -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000015 @@ -205,8 +206,8 @@ def: "The outer layer of the embryo derived from the epiblast. The definitive ec xref: TAO:0000016 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0000018 ! epiblast -relationship: end ZFS:0000038 ! Larval:Day 6 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000038 ! larval:day 6 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000017 @@ -215,8 +216,8 @@ namespace: zebrafish_anatomy xref: TAO:0000017 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0000416 ! presumptive endoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000035 ! larval:protruding-mouth +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000018 @@ -226,9 +227,9 @@ def: "The outer of the two layers of the blastoderm that form during gastrulatio xref: TAO:0000018 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000019 @@ -240,11 +241,11 @@ synonym: "pineal gland" EXACT [] synonym: "pineal organ" EXACT [] xref: TAO:0000019 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001127 ! visual system relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000020 @@ -255,8 +256,8 @@ synonym: "extraembryonic structures" EXACT PLURAL [] xref: CARO:0000042 xref: TAO:0000020 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000022 @@ -269,9 +270,9 @@ synonym: "fp" EXACT [] xref: TAO:0000022 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001218 ! presumptive floor plate -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000023 @@ -284,8 +285,8 @@ synonym: "forerunner cells" EXACT PLURAL [] xref: TAO:0000023 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001126 ! noninvoluting endocytic marginal cell cluster -relationship: end ZFS:0000023 ! Segmentation:1-4 somites -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000023 ! segmentation:1-4 somites +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0000024 @@ -295,9 +296,9 @@ def: "Layer of the retina that contains the ganglion cell bodies." [GOC:mh, ORCi synonym: "ganglion cell layer" EXACT [] xref: TAO:0000024 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000026 @@ -308,8 +309,8 @@ synonym: "hgg" EXACT [] xref: TAO:0000026 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000058 ! polster -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000027 @@ -319,9 +320,9 @@ def: "Skeletal system of paired fins." [GOC:mh, ORCiD:0000-0001-9114-8737] synonym: "appendicular skeleton" EXACT [] xref: TAO:0000027 is_a: ZFA:0000434 ! skeletal system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005596 ! paired fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000028 @@ -333,9 +334,9 @@ synonym: "heart primordia" EXACT PLURAL [] xref: TAO:0000028 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001065 ! lateral mesoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000029 @@ -346,9 +347,9 @@ synonym: "rhombencephalon" EXACT [] xref: TAO:0000029 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007043 ! hindbrain neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000030 @@ -359,9 +360,9 @@ synonym: "maculae utricle" EXACT PLURAL [] xref: TAO:0000030 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000168 ! anterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000700 ! utricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000031 @@ -371,9 +372,9 @@ def: "Portion of tissue that arises from the arise from the lateral edges of the xref: TAO:0000031 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001217 ! presumptive hypochord -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000017 ! endoderm -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000032 @@ -382,9 +383,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure which is the largest portion of diencephalon and is ventrally located. The hypothalamus arises near the end of the segmentation period and the embryonic hypothalamic region gives rise to the neurohypophysis and other diencephalic nuclei." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000032 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000033 @@ -397,9 +398,9 @@ xref: TAO:0000033 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000121 ! lateral plate mesoderm relationship: develops_from ZFA:0001201 ! ventral lateral mesoderm -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000034 @@ -409,9 +410,9 @@ def: "A sensory system on the surface of the fish, consisting of small sensory p synonym: "ll" EXACT [] xref: TAO:0000034 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000035 @@ -422,9 +423,9 @@ synonym: "lenses" EXACT PLURAL [] xref: TAO:0000035 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001679 ! solid lens vesicle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000036 @@ -433,8 +434,8 @@ namespace: zebrafish_anatomy def: "System responsible for the production and movement of bile." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000036 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000037 @@ -445,8 +446,8 @@ synonym: "anatomical structures" EXACT PLURAL [] xref: CARO:0000003 xref: TAO:0000037 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000038 @@ -455,8 +456,8 @@ namespace: zebrafish_anatomy def: "Embryonic structure, the edge of the blastoderm." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000038 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000039 @@ -464,8 +465,8 @@ name: median axial vein namespace: zebrafish_anatomy xref: TAO:0000039 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000040 @@ -475,8 +476,8 @@ def: "Surface structure that will develop into one of the median fins. Extends synonym: "median fin" RELATED [] xref: TAO:0000040 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000041 @@ -485,8 +486,8 @@ namespace: zebrafish_anatomy xref: TAO:0000041 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000042 @@ -499,9 +500,9 @@ synonym: "midbrain-hindbrain boundary" EXACT [] xref: TAO:0000042 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007047 ! midbrain hindbrain boundary neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000043 @@ -512,9 +513,9 @@ subset: cell_slim synonym: "muscle pioneers somite 1" EXACT PLURAL [] xref: TAO:0000043 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000072 ! somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000044 @@ -524,9 +525,9 @@ def: "Portion of somite 14 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000044 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000045 @@ -536,8 +537,8 @@ def: "A cell population arising from the dorsolateral aspect of the central nerv xref: TAO:0000045 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007082 ! neural plate border -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000046 @@ -549,9 +550,9 @@ synonym: "neuroretina" EXACT [] xref: TAO:0000046 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001071 ! presumptive neural retina -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000047 @@ -563,9 +564,9 @@ synonym: "nose" RELATED [] xref: TAO:0000047 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000048 ! olfactory placode -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000048 @@ -576,9 +577,9 @@ synonym: "olfactory placodes" EXACT PLURAL [] xref: TAO:0000048 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007062 ! olfactory field -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000049 @@ -588,9 +589,9 @@ def: "Lumen of optic stalk." [ZFIN:ZDB-PUB-101008-1] synonym: "optic recesses" EXACT PLURAL [] xref: TAO:0000049 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000050 @@ -601,9 +602,9 @@ synonym: "optic vesicles" EXACT PLURAL [] xref: TAO:0000050 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000570 ! optic primordium -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000051 @@ -616,8 +617,8 @@ synonym: "ov" EXACT [] xref: TAO:0000051 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000138 ! otic placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000052 @@ -627,9 +628,9 @@ def: "Actinotrichium which is part of the dorsal fin fold." [GOC:cvs, ORCiD:0000 synonym: "dorsal actinotrichia" EXACT PLURAL [] xref: TAO:0000052 is_a: ZFA:0000089 ! fin fold actinotrichium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000102 ! dorsal fin fold -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000053 @@ -639,9 +640,9 @@ def: "Embryonic structure part of the mesoderm fated to become segmental plate." synonym: "presumptive segmental plates" EXACT PLURAL [] xref: TAO:0000053 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000054 @@ -651,9 +652,9 @@ def: "Serous membrane that surrounds the heart." [GOC:cvs, ORCiD:0000-0002-2244- synonym: "pericardial sac" EXACT [] xref: TAO:0000054 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000056 @@ -662,9 +663,9 @@ namespace: zebrafish_anatomy def: "Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000056 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000058 @@ -675,9 +676,9 @@ synonym: "pillow" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000058 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000004 ! anterior axial hypoblast -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000060 ! prechordal plate -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000059 @@ -688,8 +689,8 @@ synonym: "post optic commissure" EXACT [] synonym: "post-optic commissure" EXACT [] xref: TAO:0000059 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000060 @@ -698,9 +699,9 @@ namespace: zebrafish_anatomy def: "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000060 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001204 ! axial mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000062 @@ -710,10 +711,10 @@ def: "Embryonic structure that gives rise to the forebrain." [GOC:mh, ORCiD:0000 synonym: "presumptive prosencephalon" EXACT [] xref: TAO:0000062 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000063 @@ -727,8 +728,8 @@ synonym: "prospective neuroectoderm" EXACT [] synonym: "prospective vegetal ectoderm" EXACT [] xref: TAO:0000063 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000021 ! gastrula:90%-epiboly +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000064 @@ -739,9 +740,9 @@ synonym: "outer layer optic cup" EXACT [] synonym: "presumptive pigmented epithelia" EXACT PLURAL [] xref: TAO:0000064 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000066 @@ -751,9 +752,9 @@ def: "An inward fold on the surface of the embryonic ectoderm that develops into synonym: "anus" RELATED [] xref: TAO:0000066 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000067 @@ -763,9 +764,9 @@ def: "Intermediate mesoderm that is located beneath the anterior somites and giv synonym: "pronephric primordium" EXACT [ZFIN:ZDB-PUB-000606-4] xref: TAO:0000067 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0001206 ! intermediate mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000068 @@ -775,9 +776,9 @@ def: "Cluster of cells in the neural plate that have the potential to become neu synonym: "proneural clusters" EXACT PLURAL [] xref: TAO:0000068 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000069 @@ -788,8 +789,8 @@ synonym: "r6" EXACT [] xref: TAO:0000069 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001210 ! presumptive rhombomere 6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000070 @@ -810,9 +811,9 @@ synonym: "Spemann Mangold organizer" EXACT [] synonym: "Spemann's organizer" EXACT [] xref: TAO:0000071 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000072 @@ -821,8 +822,8 @@ namespace: zebrafish_anatomy def: "Anteriormost undifferentiated mesodermal component of early trunk segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000072 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000073 @@ -831,8 +832,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 5 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000073 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000074 @@ -841,8 +842,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 26 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000074 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000075 @@ -854,9 +855,9 @@ synonym: "spinal cord structure" RELATED [] xref: TAO:0000075 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0007042 ! spinal cord neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000076 @@ -867,9 +868,9 @@ synonym: "gas bladder" EXACT [] xref: TAO:0000076 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005335 ! swim bladder bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000077 @@ -880,8 +881,8 @@ synonym: "tailbud" EXACT [] xref: TAO:0000077 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000078 @@ -891,9 +892,9 @@ def: "Actinotrichium which is part of the ventral fin fold." [GOC:mh, ORCiD:0000 synonym: "ventral actinotrichia" EXACT PLURAL [] xref: TAO:0000078 is_a: ZFA:0000089 ! fin fold actinotrichium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001069 ! ventral fin fold -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000079 @@ -903,9 +904,9 @@ def: "The anterior and dorsal forebrain neuromere. In ray-finned fishes and most xref: TAO:0000079 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000571 ! presumptive telencephalon -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000080 @@ -914,8 +915,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the trigeminal ganglion." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000080 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000081 @@ -923,8 +924,8 @@ name: trunk mesenchyme namespace: zebrafish_anatomy xref: TAO:0000081 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000082 @@ -934,9 +935,9 @@ def: "Vessels that carry blood to the heart." [GOC:cvs, ORCiD:0000-0002-2244-791 synonym: "venous system" RELATED [] xref: TAO:0000082 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000083 @@ -944,8 +945,8 @@ name: ventral mesoderm namespace: zebrafish_anatomy xref: TAO:0000083 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000084 @@ -958,8 +959,8 @@ synonym: "yolk cell" EXACT [] xref: CL:0000428 xref: TAO:0000084 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000085 @@ -975,9 +976,9 @@ synonym: "apical fold pectoral fin" EXACT [] xref: TAO:0000085 xref: TAO:0000736 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000086 @@ -988,9 +989,9 @@ synonym: "enveloping layer" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000086 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001484 ! superficial blastomere -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000088 @@ -1004,8 +1005,8 @@ xref: TAO:0000088 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000084 ! yolk relationship: develops_from ZFA:0000541 ! marginal blastomere -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000011 ! Blastula:1k-cell +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000011 ! blastula:1k-cell [Term] id: ZFA:0000089 @@ -1016,9 +1017,9 @@ synonym: "fin fold actinotrichia" EXACT PLURAL [] synonym: "median fin fold actinotrichium" EXACT [] xref: TAO:0000089 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000090 @@ -1027,9 +1028,9 @@ namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000090 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000091 @@ -1043,9 +1044,9 @@ synonym: "presumptive notochord" EXACT [] xref: TAO:0000091 xref: TAO:0001219 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001204 ! axial mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000092 @@ -1055,8 +1056,8 @@ def: "Organism subdivision running along the rostral-caudal axis of the early em synonym: "midline" EXACT [] xref: TAO:0000092 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0000093 @@ -1067,9 +1068,9 @@ subset: cell_slim synonym: "blastomeres" EXACT PLURAL [] xref: TAO:0000093 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000015 ! Blastula:Dome +relationship: end ZFS:0000015 ! blastula:dome relationship: part_of ZFA:0001175 ! blastodisc -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000094 @@ -1082,9 +1083,9 @@ synonym: "posterior blood island" RELATED [] synonym: "posterior ICM" EXACT [] xref: TAO:0000094 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000033 ! intermediate cell mass of mesoderm -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000095 @@ -1095,10 +1096,10 @@ synonym: "branchial arch skeleton" EXACT [] synonym: "gill arches 1-5 skeleton" EXACT [] xref: TAO:0000095 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000096 @@ -1107,8 +1108,8 @@ namespace: zebrafish_anatomy def: "Blood vasculature comprised of the cardinal veins." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000096 is_a: ZFA:0001079 ! blood vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000097 @@ -1117,8 +1118,8 @@ namespace: zebrafish_anatomy def: "Artery originating at the junction of the first two aortic arches and supplying the anterior brain." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000097 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000098 @@ -1130,8 +1131,8 @@ synonym: "cell division" RELATED [] synonym: "proliferation" RELATED [] xref: TAO:0000098 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000012 ! Blastula:High +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0000099 @@ -1140,9 +1141,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the brain." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000099 is_a: ZFA:0001267 ! cranial vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000100 @@ -1152,9 +1153,9 @@ def: "Brain structure derived from the anterior hindbrain, and perhaps including xref: TAO:0000100 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001442 ! upper rhombic lip -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000101 @@ -1164,9 +1165,9 @@ def: "The more posterior and ventral of two forebrain neuromeres, the other bein xref: TAO:0000101 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000574 ! presumptive diencephalon -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000102 @@ -1175,9 +1176,9 @@ namespace: zebrafish_anatomy def: "Region of the median fin fold that develops into the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000102 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000103 @@ -1230,9 +1231,9 @@ def: "A cellular, multilayered epithelium derived from the ectoderm. Zebrafish e xref: TAO:0000105 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000016 ! ectoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000106 @@ -1242,9 +1243,9 @@ def: "The posterior elongated region of the yolk cell that forms during the segm synonym: "yolk extension" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000106 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000084 ! yolk -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000107 @@ -1255,10 +1256,10 @@ synonym: "eyes" EXACT PLURAL [] xref: TAO:0000107 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001678 ! immature eye -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head relationship: part_of ZFA:0001127 ! visual system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000108 @@ -1268,8 +1269,8 @@ def: "Surface structure involved in locomotion." [TAO:WD] synonym: "fins" EXACT PLURAL [] xref: TAO:0000108 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000109 @@ -1280,9 +1281,9 @@ synonym: "prosencephalon" EXACT [] xref: TAO:0000109 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007041 ! forebrain neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000110 @@ -1297,10 +1298,10 @@ synonym: "ventricle IV" EXACT [] synonym: "ventriculus rhombencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000110 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000111 @@ -1310,8 +1311,8 @@ def: "Embryonic structure that forms as a thickened annulus at the blastoderm ri xref: TAO:0000111 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000112 @@ -1324,9 +1325,9 @@ synonym: "gut tube" EXACT [] xref: TAO:0000112 is_a: ZFA:0001512 ! anatomical group relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000113 @@ -1335,8 +1336,8 @@ namespace: zebrafish_anatomy def: "Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head." [http://www.Biology-Text.com] xref: TAO:0000113 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000114 @@ -1346,10 +1347,10 @@ def: "Blood pumping organ composed of four components: sinus venosus, atrium, ca xref: TAO:0000114 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000360 ! heart tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000115 @@ -1361,9 +1362,9 @@ synonym: "rudimentary heart" EXACT [] xref: TAO:0000115 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000028 ! heart primordium -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000116 @@ -1374,9 +1375,9 @@ synonym: "maculae lagena" EXACT PLURAL [] xref: TAO:0000116 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000374 ! lagena -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000117 @@ -1387,9 +1388,9 @@ synonym: "mesendoderm" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000117 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000118 @@ -1399,10 +1400,10 @@ def: "A compound organ which is an endocrine gland located ventral to the dience synonym: "pituitary" EXACT [] xref: TAO:0000118 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000119 @@ -1413,9 +1414,9 @@ synonym: "inner nuclear layer" EXACT PLURAL [] synonym: "intermediate cell layer" EXACT [] xref: TAO:0000119 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000120 @@ -1426,9 +1427,9 @@ synonym: "lateral line ganglia" EXACT PLURAL [] synonym: "llg" EXACT [] xref: TAO:0000120 is_a: ZFA:0000013 ! cranial ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000121 @@ -1438,8 +1439,8 @@ synonym: "lateral plate" EXACT [] synonym: "LPM" EXACT [] xref: TAO:0000121 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000122 @@ -1449,10 +1450,10 @@ def: "Ectodermal primordium of the lens of the eye." [ZFIN:ZDB-PUB-961014-576] synonym: "lens placodes" EXACT PLURAL [] xref: TAO:0000122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000016 ! ectoderm relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000123 @@ -1462,10 +1463,10 @@ def: "Solid compound organ with three lobes that has many functions including bi xref: TAO:0000123 is_a: ZFA:0001491 ! solid compound organ relationship: develops_from ZFA:0000124 ! liver primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000124 @@ -1476,9 +1477,9 @@ synonym: "liver bud" EXACT [] xref: TAO:0000124 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000125 @@ -1489,9 +1490,9 @@ synonym: "neuromast mandibular" EXACT [] synonym: "neuromasts mandibular" EXACT PLURAL [] xref: TAO:0000125 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000259 ! mandibular lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000126 @@ -1501,9 +1502,9 @@ def: "Centra are represented by mineralized, calcified, or ossified portions tha synonym: "autocentrum" EXACT [] xref: TAO:0000126 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001189 ! vertebra -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000127 @@ -1520,9 +1521,9 @@ synonym: "mesencephalon" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000128 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007039 ! midbrain neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000130 @@ -1534,9 +1535,9 @@ synonym: "nasal pit" EXACT [] synonym: "olfactory cavity" EXACT [] xref: TAO:0000130 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000131 @@ -1547,8 +1548,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000131 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000132 ! neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000025 ! segmentation:10-13 somites +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000132 @@ -1559,8 +1560,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000132 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000063 ! presumptive neural plate -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000133 @@ -1571,8 +1572,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000133 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000131 ! neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000135 @@ -1583,8 +1584,8 @@ synonym: "notocord" EXACT [] xref: TAO:0000135 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000091 ! axial chorda mesoderm -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000136 @@ -1595,9 +1596,9 @@ synonym: "neuromast otic" EXACT [] synonym: "neuromasts otic" EXACT PLURAL [] xref: TAO:0000136 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000464 ! otic lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000137 @@ -1608,9 +1609,9 @@ synonym: "optic stalks" EXACT PLURAL [] xref: TAO:0000137 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007031 ! anterior neural rod -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000138 @@ -1619,9 +1620,9 @@ namespace: zebrafish_anatomy def: "Primordium of the ear epithelium before it hollows into the otic vesicle, present beside the hindbrain rudiment in the mid-segmentation period. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000138 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000140 @@ -1631,10 +1632,10 @@ def: "The pancreas is an organ composed of endocrine and exocrine glandular tiss xref: TAO:0000140 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001390 ! pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000141 @@ -1645,8 +1646,8 @@ synonym: "pectoral fin buds" EXACT PLURAL [] xref: TAO:0000141 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001453 ! pectoral fin field -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000142 @@ -1656,8 +1657,8 @@ def: "Nervous structures including ganglia outside of the central nervous system synonym: "pns" EXACT [] xref: TAO:0000142 is_a: ZFA:0000396 ! nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000143 @@ -1667,9 +1668,9 @@ def: "The layer within the retina where the photoreceptor cell receptor segments synonym: "retinal photoreceptor layers" EXACT PLURAL [] xref: TAO:0000143 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000144 @@ -1684,9 +1685,9 @@ synonym: "RPE" EXACT [] xref: TAO:0000144 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000064 ! presumptive retinal pigmented epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000146 @@ -1696,9 +1697,9 @@ def: "Embryonic structure that gives rise to the brain." [GOC:mh, ORCiD:0000-000 synonym: "brain rudiment" EXACT [] xref: TAO:0000146 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000148 @@ -1708,10 +1709,10 @@ def: "Embryonic structure that gives rise to the midbrain." [GOC:mh, ORCiD:0000- synonym: "presumptive mesencephalon" EXACT [] xref: TAO:0000148 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000149 @@ -1721,10 +1722,10 @@ def: "Multi-tissue structure that arises from the heart rudiment and will become xref: TAO:0000149 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000115 ! heart rudiment -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000150 @@ -1735,9 +1736,9 @@ synonym: "pronephric ducts" EXACT PLURAL [] xref: TAO:0000150 is_a: ZFA:0005171 ! duct relationship: develops_from ZFA:0000067 ! pronephric mesoderm -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000151 @@ -1749,10 +1750,10 @@ synonym: "pronephric nephron" EXACT [] xref: TAO:0000151 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000067 ! pronephric mesoderm -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000152 @@ -1763,9 +1764,9 @@ synonym: "retinas" EXACT PLURAL [] xref: TAO:0000152 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001202 ! optic cup -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000153 @@ -1776,8 +1777,8 @@ synonym: "r8" EXACT [] xref: TAO:0000153 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001214 ! presumptive rhombomere 8 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000154 @@ -1788,9 +1789,9 @@ synonym: "inflow tract" EXACT [] xref: TAO:0000154 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001722 ! presumptive sinus venosus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000155 @@ -1801,9 +1802,9 @@ synonym: "somitic mesoderm" RELATED [] xref: TAO:0000155 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000279 ! segmental plate -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000156 @@ -1812,8 +1813,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 20 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000156 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000157 @@ -1822,8 +1823,8 @@ namespace: zebrafish_anatomy def: "Posteriormost undifferentiated mesodermal component of early tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000157 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000158 @@ -1837,9 +1838,9 @@ xref: TAO:0000158 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001581 ! ural centrum 2 relationship: develops_from ZFA:0001583 ! preural centrum 1+ ural centrum 1 -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000159 @@ -1853,10 +1854,10 @@ synonym: "midbrain ventricle" EXACT [] synonym: "ventriculus mesencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000159 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000160 @@ -1869,10 +1870,10 @@ synonym: "midbrain tegmentum" EXACT [] xref: TAO:0000160 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000761 ! basal plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000161 @@ -1886,10 +1887,10 @@ synonym: "ventriculus diencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000161 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001259 ! forebrain ventricle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000162 @@ -1899,8 +1900,8 @@ def: "The ectodermal rudiment of the trigeminal ganglion, distinguishable during synonym: "trigeminal placodes" EXACT PLURAL [] xref: TAO:0000162 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000163 @@ -1910,8 +1911,8 @@ def: "System that removes and collects metabolic waste from the blood while main synonym: "urinary system" RELATED [] xref: TAO:0000163 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000164 @@ -1919,8 +1920,8 @@ name: ventral mesenchyme namespace: zebrafish_anatomy xref: TAO:0000164 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000165 @@ -1933,9 +1934,9 @@ synonym: "lateral lobe of hypothalamus" EXACT [] synonym: "lobus inferior hypothalami" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000165 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000347 ! dorsal hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000166 @@ -1952,9 +1953,9 @@ synonym: "medial crista" RELATED [ZFIN:ZDB-PUB-051116-3] xref: TAO:0000166 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000225 ! lateral crista primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000167 @@ -1963,9 +1964,9 @@ namespace: zebrafish_anatomy def: "Median fin skeleton that is located posterior to the anus." [TAO:curator] xref: TAO:0000167 is_a: ZFA:0001123 ! axial fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001162 ! anal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000168 @@ -1976,9 +1977,9 @@ synonym: "am" EXACT [] synonym: "anterior sensory patch" EXACT [] xref: TAO:0000168 is_a: ZFA:0000386 ! macula -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001671 ! macula communis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000169 @@ -1996,9 +1997,9 @@ synonym: "basibranchials" EXACT PLURAL [] xref: TAO:0000170 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001220 ! copula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000171 @@ -2015,10 +2016,10 @@ def: "Muscle that is part of pharyngeal arches 3-7 which are also known as the b synonym: "branchial muscles" EXACT PLURAL [] xref: TAO:0000172 is_a: ZFA:0001652 ! head muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000173 @@ -2031,9 +2032,9 @@ synonym: "truncus" EXACT [] xref: TAO:0000173 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001712 ! presumptive bulbus arteriosus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000174 @@ -2045,9 +2046,9 @@ synonym: "caudal cerebellar tracts" EXACT PLURAL [] synonym: "cerebellovestibular tracts" EXACT PLURAL [] xref: TAO:0000174 is_a: ZFA:0001708 ! cerebellar white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000175 @@ -2058,9 +2059,9 @@ synonym: "caudal lateral line nerve" EXACT [] xref: TAO:0000175 is_a: ZFA:0000641 ! cranial nerve is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000176 @@ -2071,8 +2072,8 @@ synonym: "area ventralis telencephali, nucleus lateralis" EXACT [] xref: TAO:0002204 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon relationship: develops_from ZFA:0005911 ! presumptive lateral nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000177 @@ -2081,8 +2082,8 @@ namespace: zebrafish_anatomy synonym: "caudal obliques" EXACT PLURAL [] xref: TAO:0000177 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000178 @@ -2091,9 +2092,9 @@ namespace: zebrafish_anatomy def: "Portion of the fish's body that is posterior to the vent and anterior to the caudal fin." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000178 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000179 @@ -2103,10 +2104,10 @@ def: "Cranial nerve root which is part of the abducens nerve (CN-VI) and is loca synonym: "radix caudalis nervi abducentis" EXACT [] xref: TAO:0000179 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000310 ! cranial nerve VI relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000180 @@ -2117,10 +2118,10 @@ synonym: "CV" EXACT [] xref: TAO:0000180 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0001286 ! caudal vein plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000181 @@ -2133,9 +2134,9 @@ synonym: "Dp" EXACT [ZFIN:ZDB-PUB-150226-6] synonym: "posterior zone of dorsal telencephalic area" EXACT [] xref: TAO:0000181 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000182 @@ -2146,9 +2147,9 @@ synonym: "central posterior thalamic nucleus" EXACT [] synonym: "nucleus centralis posterior thalami" EXACT [] xref: TAO:0000182 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000653 ! dorsal thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000183 @@ -2158,9 +2159,9 @@ def: "Multi-tissue structure that is the central part of the pretectum." [GOC:mh xref: TAO:0000183 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005908 ! presumptive pretectum proliferative zone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000418 ! pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000184 @@ -2170,9 +2171,9 @@ def: "Transversely oriented bone connecting the occipital region of the skull do synonym: "cleithra" EXACT PLURAL [] xref: TAO:0000184 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000185 @@ -2182,8 +2183,8 @@ def: "Anterior commissure which abuts the preoptic region dorsally. From Neuroan synonym: "commissura anterior, pars ventralis" EXACT [] xref: TAO:0000185 is_a: ZFA:0001108 ! anterior commissure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000186 @@ -2193,10 +2194,10 @@ def: "Bilaterally paired longitudinal vein; the anterior cardinal returns blood synonym: "duct of Cuvier" EXACT [] xref: TAO:0000186 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000188 @@ -2204,13 +2205,13 @@ name: corpus cerebelli namespace: zebrafish_anatomy def: "Brain structure which is one of three parts of the cerebellum and is the entry point for a posterior cerebellar tract that carries cerebellar afferents from many brain stem nuclei. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] synonym: "cerebellar corpus" EXACT [] -synonym: "corpus cerebelli granular layer " EXACT [ZFIN:ZDB-PUB-961014-1280] +synonym: "corpus cerebelli granular layer" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "corpus cerebellum" EXACT PLURAL [] xref: TAO:0000188 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000189 @@ -2220,9 +2221,9 @@ def: "Anatomical cluster of skeletal elements that is a posterolateral part of t synonym: "cranial vault" RELATED [] xref: TAO:0000189 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000190 @@ -2232,9 +2233,9 @@ def: "Structures containing a collection of nerve cell bodies." [GOC:mh, ORCiD:0 synonym: "ganglia" EXACT PLURAL [] xref: TAO:0000190 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000191 @@ -2244,11 +2245,11 @@ def: "Dermal bone that forms the antero-lateral part of the lower jaw. It first synonym: "dentary bone" EXACT [] xref: TAO:0000191 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005488 ! mandibular symphysis relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000192 @@ -2258,9 +2259,9 @@ def: "The bundle of the sensory root of the trigeminal nerve that descends in th synonym: "radix descendens nervi trigemini" EXACT [] xref: TAO:0000192 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000193 @@ -2271,9 +2272,9 @@ synonym: "diffuse nuclei" EXACT PLURAL [] synonym: "DIL" EXACT [] xref: TAO:0000193 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000165 ! inferior lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000194 @@ -2283,9 +2284,9 @@ def: "Diencephalic nucleus that is part of the central pretectum and is ventral synonym: "nucleus opticus accessorius dorsalis" EXACT [] xref: TAO:0000194 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000195 @@ -2296,9 +2297,9 @@ synonym: "depressor dorsalis" EXACT [] synonym: "dorsal depressors" EXACT PLURAL [] xref: TAO:0000195 is_a: ZFA:0005270 ! depressor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000196 @@ -2308,11 +2309,11 @@ def: "The dorsal hypohyal is a small cartilage replacement bone ossifying from t synonym: "dorsal hypohyals" EXACT PLURAL [] xref: TAO:0000196 is_a: ZFA:0001381 ! hypohyal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005457 ! dorsal hypohyal-urohyal joint relationship: overlaps ZFA:0005458 ! dorsal hypohyal-ventral hypohyal joint relationship: overlaps ZFA:0005467 ! ceratohyal-dorsal hypohyal joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000197 @@ -2323,9 +2324,9 @@ synonym: "dorsal habenular nuclei" EXACT PLURAL [] synonym: "dorsal nuclei" EXACT PLURAL [] xref: TAO:0000197 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000213 ! habenula -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000199 @@ -2334,9 +2335,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the dorsal hypothalamic zone and is located periventricularly. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000199 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000347 ! dorsal hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000200 @@ -2348,8 +2349,8 @@ synonym: "DRG" EXACT [] xref: TAO:0000200 is_a: ZFA:0001573 ! trunk ganglion relationship: develops_from ZFA:0001024 ! trunk neural crest -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000201 @@ -2357,8 +2358,8 @@ name: dorsal transverse namespace: zebrafish_anatomy xref: TAO:0000201 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000202 @@ -2369,10 +2370,10 @@ synonym: "EBA" EXACT [] xref: TAO:0000202 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000203 @@ -2390,9 +2391,9 @@ synonym: "oesophagus" EXACT [] xref: TAO:0000204 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000205 @@ -2404,9 +2405,9 @@ synonym: "lateralis superficialis ventralis" EXACT [] synonym: "LSV" RELATED [] xref: TAO:0000205 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000206 @@ -2418,9 +2419,9 @@ synonym: "nucleus motorius nervi facialis" EXACT [] synonym: "nVII" EXACT [] xref: TAO:0000206 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000207 @@ -2429,8 +2430,8 @@ namespace: zebrafish_anatomy def: "Musculature part of fin." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000207 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000208 @@ -2439,11 +2440,11 @@ namespace: zebrafish_anatomy def: "The compound organ that stores bile." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000208 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000209 @@ -2453,8 +2454,8 @@ def: "Preglomerular nucleus which is located between the rostral and medial preg synonym: "lateral preglomerular nuclei" EXACT PLURAL [] xref: TAO:0000209 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000210 @@ -2464,9 +2465,9 @@ def: "Portion of tissue that is the caudal gigantocellular portion of the magnoc synonym: "nucleus praeopticus magnocellularis, pars gigantocellularis" EXACT [] xref: TAO:0000210 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000248 ! magnocellular preoptic nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000211 @@ -2476,9 +2477,9 @@ def: "Multi-tissue structure that is the transverse vertical platelet on the gil synonym: "gill lamellae" EXACT PLURAL [] xref: TAO:0000211 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000212 @@ -2491,9 +2492,9 @@ synonym: "eminentia granularis" EXACT [] synonym: "lateral granular eminence" EXACT [] xref: TAO:0000212 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000307 ! vestibulolateralis lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000213 @@ -2504,9 +2505,9 @@ synonym: "habenulae" EXACT PLURAL [] synonym: "habenular nucleus" EXACT [] xref: TAO:0000213 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000214 @@ -2525,9 +2526,9 @@ namespace: zebrafish_anatomy def: "Hindbrain nucleus where climbing fibers originate. The neurons in the inferior olive are capable of prolonged oscillatory activity. The inferior olive is called a precerebellar nucleus since virtually all of the efferent axons terminate in the cerebellum." [GOC:mh, ISBN:0471888893, ORCiD:0000-0001-9114-8737] xref: TAO:0000215 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000216 @@ -2536,9 +2537,9 @@ namespace: zebrafish_anatomy comment: This may need to be treated as a waypoint in the development of the various muscles or as a group of muscles. xref: TAO:0000216 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000217 @@ -2551,9 +2552,9 @@ synonym: "otocyst" RELATED [] xref: TAO:0000217 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0000051 ! otic vesicle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000219 @@ -2562,9 +2563,9 @@ namespace: zebrafish_anatomy synonym: "intermediate reticular formations" EXACT PLURAL [] xref: TAO:0000219 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000542 ! medial column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000220 @@ -2577,8 +2578,8 @@ synonym: "lateral semicircular canals" EXACT PLURAL [] synonym: "lateral semicircular duct" EXACT [] xref: TAO:0000220 is_a: ZFA:0000431 ! semicircular canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000221 @@ -2587,8 +2588,8 @@ namespace: zebrafish_anatomy synonym: "internal levators" EXACT PLURAL [] xref: TAO:0000221 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000222 @@ -2599,8 +2600,8 @@ synonym: "isthmic primary nuclei" EXACT PLURAL [] synonym: "isthmic primary sensory trigeminal nucleus" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000222 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000223 @@ -2612,9 +2613,9 @@ synonym: "lacrimal" EXACT [] synonym: "lacrymal bone" EXACT [] xref: TAO:0000223 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000224 @@ -2637,9 +2638,9 @@ def: "Is an otic epithelium that will mature into the lateral crista." [GOC:ymb, synonym: "lateral crista primordia" EXACT PLURAL [] xref: TAO:0000225 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000226 @@ -2650,12 +2651,12 @@ synonym: "lateral ethmoids" EXACT PLURAL [] xref: TAO:0000226 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001503 ! lamina orbitonasalis -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005420 ! autopalatine-lateral ethmoid joint relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000227 @@ -2667,9 +2668,9 @@ synonym: "lateral hypothalamic nuclei" EXACT PLURAL [] synonym: "lateral tuberal nucleus" EXACT [] xref: TAO:0000227 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000228 @@ -2680,9 +2681,9 @@ synonym: "lateral line primordia" EXACT PLURAL [] synonym: "llp" EXACT [] xref: TAO:0000228 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000229 @@ -2692,8 +2693,8 @@ def: "Telencephalic white matter which extends between the olfactory bulb and th synonym: "tractus olfactorius lateralis" EXACT [] xref: TAO:0000229 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000230 @@ -2703,9 +2704,9 @@ def: "Muscle that attaches to the parhypurpophyses. The muscle inserts on the up synonym: "hypochordal longitudinalis" EXACT [] xref: TAO:0000230 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000628 ! caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000231 @@ -2719,9 +2720,9 @@ synonym: "recessus lateralis" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000231 xref: TAO:0001799 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000232 @@ -2732,8 +2733,8 @@ synonym: "lateral semicircular canal primordia" RELATED PLURAL [] synonym: "lateral semicircular canal primordium" RELATED [] xref: TAO:0000232 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000233 @@ -2747,9 +2748,9 @@ synonym: "lower semilunar valve" EXACT [ZFIN:ZDB-PUB-060921-12] synonym: "mandibular valve" EXACT [] xref: TAO:0000233 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000234 @@ -2760,9 +2761,9 @@ synonym: "maculae neglecta" EXACT PLURAL [] xref: TAO:0000234 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000235 @@ -2772,9 +2773,9 @@ def: "Diencephalic nucleus that is part of the superficial pretectum and is caud synonym: "magnocellular superficial pretectal nuclei" EXACT PLURAL [] xref: TAO:0000235 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000687 ! superficial pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000236 @@ -2784,10 +2785,10 @@ def: "Muscle that are part of the mandibular arch (pharyngeal arch 1)." [GOC:cv synonym: "mandibular muscles" EXACT PLURAL [] xref: TAO:0000236 is_a: ZFA:0001652 ! head muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001612 ! pharyngeal arch 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000237 @@ -2796,9 +2797,9 @@ namespace: zebrafish_anatomy synonym: "medial forebrain bundles diencephalon" EXACT PLURAL [] xref: TAO:0000237 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005111 ! medial forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000238 @@ -2808,8 +2809,8 @@ def: "Telencephalic white matter which extends between the olfactory bulb and th synonym: "tractus olfactorius medialis" EXACT [] xref: TAO:0000238 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000239 @@ -2820,9 +2821,9 @@ synonym: "mesocoracoid bones" EXACT PLURAL [] xref: TAO:0000239 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001537 ! mesocoracoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000240 @@ -2833,12 +2834,12 @@ synonym: "metapterygoids" EXACT PLURAL [] xref: TAO:0000240 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0005902 ! pterygoid process -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005469 ! hyomandibula-metapterygoid joint relationship: overlaps ZFA:0005486 ! quadrate-metapterygoid joint relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000241 @@ -2846,9 +2847,9 @@ name: midline column namespace: zebrafish_anatomy xref: TAO:0000241 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000421 ! reticular formation -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000242 @@ -2858,8 +2859,8 @@ def: "Gonochoristic organism that can produce male gametes." [GOC:mh, ORCiD:0000 xref: CARO:0000027 xref: TAO:0000242 is_a: ZFA:0001094 ! whole organism -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000243 @@ -2872,9 +2873,9 @@ synonym: "neuromasts" EXACT PLURAL [] xref: TAO:0000243 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0005227 ! protoneuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000244 @@ -2883,9 +2884,9 @@ namespace: zebrafish_anatomy synonym: "Edinger-Westphal nucleus" EXACT [] xref: TAO:0000244 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000245 @@ -2895,8 +2896,8 @@ def: "Sensory trigeminal nucleus that lies at the mediodorsal edge of the descen synonym: "sensory nucleus of the descending trigeminal root" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000245 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000246 @@ -2905,9 +2906,9 @@ namespace: zebrafish_anatomy def: "Telencephalic nucleus which is located immediately ventral to the caudal zone of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000246 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000247 @@ -2920,8 +2921,8 @@ synonym: "octaval nerve" EXACT [] synonym: "statoacoustic nerve" EXACT [] xref: TAO:0000247 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000248 @@ -2931,9 +2932,9 @@ def: "Diencephalic nucleus that is dorsal to the caudal parvocellular preoptic n synonym: "magnocellular preoptic nuclei" EXACT PLURAL [] xref: TAO:0000248 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000249 @@ -2943,9 +2944,9 @@ synonym: "CN-I" EXACT [] synonym: "olfactory nerve" EXACT [] xref: TAO:0000249 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000250 @@ -2955,12 +2956,12 @@ def: "Dermal bone that articulates anteriorly with the hyomandibula. The opercle synonym: "opercles" EXACT PLURAL [] xref: TAO:0000250 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005885 ! operculohyoid ligament relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000251 @@ -2979,8 +2980,8 @@ synonym: "optic tracts" EXACT PLURAL [] synonym: "tractus opticus" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000252 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000253 @@ -2991,12 +2992,12 @@ synonym: "orbitosphenoids" EXACT PLURAL [] xref: TAO:0000253 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001505 ! taenia marginalis anterior -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000254 @@ -3007,9 +3008,9 @@ comment: During normal development, the exocrine anlage arises from bilateral se synonym: "pancreatic anlage" EXACT [ZFIN:ZDB-PUB-050623-3] xref: TAO:0000254 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000255 @@ -3022,8 +3023,8 @@ xref: TAO:0000255 is_a: ZFA:0000041 ! mesoderm is_a: ZFA:0000081 ! trunk mesenchyme relationship: develops_from ZFA:0000591 ! presumptive paraxial mesoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000256 @@ -3032,9 +3033,9 @@ namespace: zebrafish_anatomy synonym: "pars subcommissuralis of V" EXACT [] xref: TAO:0000256 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000304 ! ventral telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000257 @@ -3044,9 +3045,9 @@ def: "Cartilage which is part of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-22 synonym: "pectoral fin cartilages" EXACT PLURAL [] xref: TAO:0000257 is_a: ZFA:0001543 ! paired fin cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000258 @@ -3056,22 +3057,22 @@ def: "Musculature that is part of the pelvic fin." [GOC:mh, ORCiD:0000-0001-9114 xref: TAO:0000258 is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001449 ! mesenchyme pelvic fin -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000259 name: mandibular lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "mandibular lateral lines" EXACT PLURAL [] synonym: "mandibular line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000259 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000260 @@ -3082,9 +3083,9 @@ synonym: "periventricular nuclei" EXACT PLURAL [] synonym: "ventral zone of periventricular hypothalamus" EXACT [] xref: TAO:0000260 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000261 @@ -3092,8 +3093,8 @@ name: pharyngohyoid namespace: zebrafish_anatomy xref: TAO:0000261 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000262 @@ -3106,8 +3107,8 @@ synonym: "posterior semicircular canals" EXACT PLURAL [] synonym: "posterior semicircular duct" EXACT [] xref: TAO:0000262 is_a: ZFA:0000431 ! semicircular canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000263 @@ -3119,9 +3120,9 @@ synonym: "precaudal vertebrae" EXACT PLURAL [] synonym: "trunk vertebra" RELATED [] xref: TAO:0000263 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000264 @@ -3131,11 +3132,11 @@ def: "Dermal bone that is part of the opercular flap and bears the preopercular synonym: "preopercles" EXACT PLURAL [] xref: TAO:0000264 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000265 @@ -3144,8 +3145,8 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become dorsal mesoderm. Determined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000265 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000266 @@ -3157,8 +3158,8 @@ synonym: "pretectomamillary tract" EXACT [] synonym: "TPp" RELATED [] xref: TAO:0000266 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000267 @@ -3169,9 +3170,9 @@ synonym: "olfactory nerve layer" EXACT [ZFIN:ZDB-PUB-050523-2] synonym: "stratum nervosum bulbi olfactorii" EXACT [] xref: TAO:0000267 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000268 @@ -3181,9 +3182,9 @@ def: "Rod-like internal median skeletal support bones of the anal fin, which art synonym: "anal fin proximal radials" EXACT PLURAL [] xref: TAO:0000268 is_a: ZFA:0001646 ! anal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001420 ! anal fin pterygiophore -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000269 @@ -3195,9 +3196,9 @@ synonym: "flexor caudalis ventralis inferioris" EXACT [] synonym: "inferior ventral flexor" EXACT [] xref: TAO:0000269 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000270 @@ -3207,11 +3208,11 @@ def: "The dermal maxilla forms part of the upper jaw. It is first visible as a s synonym: "maxillae" EXACT PLURAL [] xref: TAO:0000270 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005421 ! autopalatine-maxillary joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000271 @@ -3221,8 +3222,8 @@ def: "The internal skeletal supports of the median and paired fins." [TAO:curat synonym: "radials" EXACT PLURAL [] xref: TAO:0000271 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000272 @@ -3231,8 +3232,8 @@ namespace: zebrafish_anatomy def: "System responsible for the exchange of gases across the gill membranes." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000272 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000274 @@ -3243,8 +3244,8 @@ synonym: "anterior octaval nucleus" EXACT [] synonym: "nucleus octavus anterior" EXACT [] xref: TAO:0000274 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000275 @@ -3252,9 +3253,9 @@ name: rostral tegmental nucleus namespace: zebrafish_anatomy xref: TAO:0000275 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000276 @@ -3262,9 +3263,9 @@ name: rostrolateral thalamic nucleus of Butler & Saidel namespace: zebrafish_anatomy xref: TAO:0000276 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000277 @@ -3275,9 +3276,9 @@ synonym: "scales" EXACT PLURAL [] xref: TAO:0000277 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001704 ! scale primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001183 ! dermal superficial region -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000278 @@ -3285,10 +3286,10 @@ name: secondary gustatory nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000278 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000279 @@ -3299,9 +3300,9 @@ synonym: "presomitic mesoderm" EXACT [] synonym: "PSM" EXACT [] xref: TAO:0000279 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000255 ! paraxial mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000280 @@ -3312,9 +3313,9 @@ synonym: "medial division" EXACT [] synonym: "valvula cerebelli, pars medialis" EXACT [] xref: TAO:0000280 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000281 @@ -3326,9 +3327,9 @@ synonym: "sensory hair cells posterior macula" EXACT PLURAL [] xref: TAO:0000281 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001099 ! immature hair cell posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000558 ! posterior macula -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000282 @@ -3338,9 +3339,9 @@ def: "Nervous system responsible for transmitting sensory stimuli." [GOC:mh, ORC synonym: "sensory systems" EXACT PLURAL [] xref: TAO:0000282 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000284 @@ -3350,11 +3351,11 @@ def: "Dermal bone lying below the opercle. The subopercle is a paired bone." [GO synonym: "subopercles" EXACT PLURAL [] xref: TAO:0000284 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000285 @@ -3366,9 +3367,9 @@ synonym: "superficial adductors" EXACT PLURAL [] xref: TAO:0000285 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000286 @@ -3379,9 +3380,9 @@ synonym: "lateral superficial muscle" RELATED [] synonym: "lateralis superficialis" EXACT [] xref: TAO:0000286 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000287 @@ -3389,13 +3390,13 @@ name: superior caudal dorsal flexor namespace: zebrafish_anatomy def: "Paired, deep caudal fin muscles that originate from the 30th vertebra and extend toward the dorsal base of the caudal fin where they insert broadly on fin rays." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] synonym: "CDS" RELATED [] -synonym: "flexor caudalis dorsalis superioris " EXACT [] +synonym: "flexor caudalis dorsalis superioris" EXACT [] synonym: "superior dorsal flexor" EXACT [] xref: TAO:0000287 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000288 @@ -3403,9 +3404,9 @@ name: supracarinalis namespace: zebrafish_anatomy xref: TAO:0000288 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000289 @@ -3421,9 +3422,9 @@ namespace: zebrafish_anatomy def: "Anatomical cluster that forms the floor and sidewalls of the middle part of the cranium." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000290 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000291 @@ -3435,9 +3436,9 @@ synonym: "medial octavolateralis nuclei" EXACT PLURAL [] synonym: "MON" RELATED [] xref: TAO:0000291 is_a: ZFA:0000381 ! lateral line sensory nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000292 @@ -3447,8 +3448,8 @@ def: "Organism subdivision which is the collection of anatomical structures on t synonym: "surface structures" EXACT PLURAL [] xref: TAO:0000292 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000293 @@ -3457,9 +3458,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is located between the dorsal diencephalon and the mesencephalon and contains the caudal commissure. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000293 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000294 @@ -3469,9 +3470,9 @@ def: "Diencephalic nucleus which is part of the caudal tuberculum. In goldfish synonym: "lateral torus" EXACT [] xref: TAO:0000294 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000295 @@ -3486,8 +3487,8 @@ xref: TAO:0000295 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000080 ! trigeminal neural crest relationship: develops_from ZFA:0000162 ! trigeminal placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000296 @@ -3495,8 +3496,8 @@ name: uncrossed tecto-bulbar tract namespace: zebrafish_anatomy xref: TAO:0000296 is_a: ZFA:0000446 ! tecto-bulbar tract -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000297 @@ -3505,9 +3506,9 @@ namespace: zebrafish_anatomy def: "The multi-tissue, vagal lobe is a large, paired brain stem structure flanking the unpaired facial lobe laterally. The vagal lobe contains motor and gustatory neurons. While some degree of histological segregation is apparent within the vagal lobe, a clear lamination, as seen in goldfish or carp is absent." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-1280] synonym: "LX" EXACT [ZFIN:ZDB-PUB-961014-1280] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000298 @@ -3519,9 +3520,9 @@ synonym: "cloacal vent" EXACT [] xref: TAO:0000298 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0000066 ! proctodeum -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000299 @@ -3537,8 +3538,8 @@ synonym: "ventral entopeduncular nucleus V" EXACT [] xref: TAO:0000299 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon relationship: develops_from ZFA:0005910 ! presumptive ventral entopeduncular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000300 @@ -3549,11 +3550,11 @@ synonym: "lower hypohyal" EXACT [] synonym: "ventrohyal" EXACT [] xref: TAO:0000300 is_a: ZFA:0001381 ! hypohyal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005458 ! dorsal hypohyal-ventral hypohyal joint relationship: overlaps ZFA:0005466 ! ceratohyal-ventral hypohyal joint relationship: overlaps ZFA:0005476 ! inter-ventral hypohyal joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000301 @@ -3564,9 +3565,9 @@ comment: Mature form at Hatching:Long-pec. synonym: "medial recti" EXACT PLURAL [] xref: TAO:0000301 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000302 @@ -3575,9 +3576,9 @@ namespace: zebrafish_anatomy def: "Habenular nucleus positioned ventromedially to the dorsal habenular nuclei. The ventral habenular nuclei are paired and symmetrical, each have a conical shape defined by a wide rostral end, occupying the entire anterior region of the habenula, and a narrow caudal end. The axons of the ventral habenular nucleus passed laterally through the interpeduncular nucleus and projected to the ventral part of the median raphe. The ventral habenular nucleus is homolog mammalian lateral habenular nucleus." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100202-7, ZFIN:ZDB-PUB-120709-5] xref: TAO:0000302 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000213 ! habenula -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000303 @@ -3587,8 +3588,8 @@ def: "Gonochoristic organism that can produce female gametes." [GOC:mh, ORCiD:00 xref: CARO:0000028 xref: TAO:0000303 is_a: ZFA:0001094 ! whole organism -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000304 @@ -3599,9 +3600,9 @@ synonym: "area ventralis telencephali" EXACT [] synonym: "subpallium" EXACT [] xref: TAO:0000304 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000305 @@ -3611,9 +3612,9 @@ def: "Groove that separates the paired inferior (or lateral) lobes of the hypoth synonym: "hypothalamic sulcus" RELATED [] xref: TAO:0000305 is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000306 @@ -3621,9 +3622,9 @@ name: ventrolateral thalamic nucleus namespace: zebrafish_anatomy xref: TAO:0000306 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000307 @@ -3632,9 +3633,9 @@ namespace: zebrafish_anatomy def: "Brain structure which is part of the cerebellum consists of the paired granular eminentia and the medial caudal lobe. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000307 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000308 @@ -3644,11 +3645,11 @@ def: "A thin medial unpaired dermal bone that is kite or paddle-shape. Underlyin synonym: "vomer" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0000308 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000309 @@ -3658,9 +3659,9 @@ def: "The portion of the YSL that is outside of the blastoderm margin during epi synonym: "E-YSL" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000309 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000013 ! Blastula:Oblong +relationship: start ZFS:0000013 ! blastula:oblong [Term] id: ZFA:0000310 @@ -3672,8 +3673,8 @@ synonym: "CN-VI" EXACT [] synonym: "nervus abducens" EXACT [] xref: TAO:0000310 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000311 @@ -3683,8 +3684,8 @@ def: "Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. xref: TAO:0000311 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0007049 ! adductor mandibulae -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000312 @@ -3694,8 +3695,8 @@ def: "Sensory trigeminal nucleus located at the tectal ventricle near the synenc synonym: "mesencephalic nuclei of trigeminal nerves" EXACT PLURAL [] xref: TAO:0000312 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000313 @@ -3706,9 +3707,9 @@ synonym: "anal inclinators" EXACT PLURAL [] synonym: "inclinatores anales" EXACT [ZFIN:ZDB-PUB-171118-8] xref: TAO:0000313 is_a: ZFA:0005276 ! inclinator muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000314 @@ -3721,8 +3722,8 @@ synonym: "anterior semicircular duct" EXACT [] synonym: "rostral vertical semicircular canal" EXACT [] xref: TAO:0000314 is_a: ZFA:0000431 ! semicircular canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000315 @@ -3733,9 +3734,9 @@ synonym: "lagenar otolith" EXACT [] synonym: "lagenolith" EXACT [] xref: TAO:0000315 is_a: ZFA:0001617 ! otolith -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000374 ! lagena -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000316 @@ -3748,9 +3749,9 @@ synonym: "glossohyal" EXACT [] xref: TAO:0000316 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001510 ! basihyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000317 @@ -3761,8 +3762,8 @@ synonym: "axial skeleton" EXACT [] xref: TAO:0000317 is_a: ZFA:0000434 ! skeletal system relationship: develops_from ZFA:0001080 ! sclerotome -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000318 @@ -3773,9 +3774,9 @@ synonym: "brain stem and spinal tract/commissure" EXACT [] synonym: "brain stem/spinal tracts and commissures" EXACT PLURAL [] xref: TAO:0000318 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000319 @@ -3785,9 +3786,9 @@ def: "The portion of tissue forming the membrane connecting the branchiostegals synonym: "branchiostegal membranes" EXACT PLURAL [] xref: TAO:0000319 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000320 @@ -3798,9 +3799,9 @@ synonym: "PC" RELATED [] synonym: "posterior commissure" EXACT [] xref: TAO:0000320 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000321 @@ -3809,8 +3810,8 @@ namespace: zebrafish_anatomy synonym: "caudal levators" EXACT PLURAL [] xref: TAO:0000321 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000322 @@ -3819,8 +3820,8 @@ namespace: zebrafish_anatomy synonym: "caudal octaval nuclei" EXACT PLURAL [] xref: TAO:0000322 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000323 @@ -3832,11 +3833,11 @@ xref: TAO:0000323 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001321 ! neurocranial trabecula relationship: develops_from ZFA:0001405 ! ethmoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000324 @@ -3847,9 +3848,9 @@ synonym: "caudal zone of periventricular hypothalamus" EXACT [] synonym: "nucleus periventricularis hypothalami, zona caudalis" EXACT [] xref: TAO:0000324 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000634 ! caudal hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000325 @@ -3859,9 +3860,9 @@ def: "Diencephalic nucleus which is part of the caudal tuberculum. It is target synonym: "posterior thalamic nucleus" EXACT [] xref: TAO:0000325 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000326 @@ -3871,8 +3872,8 @@ def: "Vertebra bearing a hemal arch and spine. The most posterior caudal vertebr synonym: "caudal vertebrae" EXACT PLURAL [] xref: TAO:0000326 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000327 @@ -3880,9 +3881,9 @@ name: central zone of the optic tectum namespace: zebrafish_anatomy xref: TAO:0000327 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000328 @@ -3892,8 +3893,8 @@ def: "Musculature system of the pharyngeal and head regions." [GOC:cvs, ORCiD:00 synonym: "head muscles" RELATED [] xref: TAO:0000328 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000329 @@ -3902,8 +3903,8 @@ namespace: zebrafish_anatomy def: "The egg shell." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000329 is_a: ZFA:0000020 ! extraembryonic structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000330 @@ -3913,9 +3914,9 @@ def: "Space proximal to the urogenital pore where the pronephric duct, intestine synonym: "cloaca lumen" EXACT [] xref: TAO:0000330 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000331 @@ -3925,8 +3926,8 @@ synonym: "commissura infima Halleri" EXACT [] synonym: "commissura infima of Haller" EXACT [] xref: TAO:0000331 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000332 @@ -3938,10 +3939,10 @@ synonym: "scapulocoracoid" RELATED [] xref: TAO:0000332 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005470 ! inter-coracoid joint relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000333 @@ -3949,9 +3950,9 @@ name: mesovarium namespace: zebrafish_anatomy xref: TAO:0000333 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000403 ! ovary -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000334 @@ -3961,9 +3962,9 @@ def: "Brain structure which is located ventrolaterally to the caudal preglomerul synonym: "mammillary body" EXACT [] xref: TAO:0000334 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000335 @@ -3972,8 +3973,8 @@ namespace: zebrafish_anatomy synonym: "tractus tectobulbaris cruciatus" EXACT [] xref: TAO:0000335 is_a: ZFA:0000446 ! tecto-bulbar tract -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000336 @@ -3997,9 +3998,9 @@ def: "CNS white matter that is part of the diencephalon." [GOC:mh, ORCiD:0000-00 synonym: "diencephalic tract/commissure" EXACT [] xref: TAO:0000338 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000339 @@ -4008,8 +4009,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that processes ingested substances." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000339 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000340 @@ -4022,8 +4023,8 @@ synonym: "entopeduncular nucleus, dorsal part" EXACT [] synonym: "nucleus entopeduncularis, pars dorsalis" EXACT [] xref: TAO:0000340 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000341 @@ -4036,9 +4037,9 @@ synonym: "dorsal flexors" EXACT PLURAL [] synonym: "flexor caudalis dorsalis inferioris" EXACT [] xref: TAO:0000341 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000342 @@ -4049,9 +4050,9 @@ synonym: "dorsal inclinators" EXACT PLURAL [] synonym: "inclinator dorsalis" EXACT [] xref: TAO:0000342 is_a: ZFA:0005276 ! inclinator muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000343 @@ -4064,22 +4065,22 @@ synonym: "dorsal nucleus of V" EXACT [] synonym: "Vd" RELATED [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000343 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000344 name: middle lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "middle lateral lines" EXACT PLURAL [] xref: TAO:0000344 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005118 ! middle lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000345 @@ -4091,9 +4092,9 @@ synonym: "dorsal recti" EXACT PLURAL [] synonym: "superior rectus" EXACT [ZFIN:ZDB-PUB-110512-18] xref: TAO:0000345 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000346 @@ -4104,9 +4105,9 @@ synonym: "DTN" RELATED [] synonym: "nucleus tegmentalis dorsalis" EXACT [] xref: TAO:0000346 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000347 @@ -4116,9 +4117,9 @@ def: "Brain structure which is the dorsal most region of the hypothalamus and ex xref: TAO:0000347 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0006000 ! intermediate hypothalamus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000348 @@ -4133,9 +4134,9 @@ namespace: zebrafish_anatomy def: "Skeletal muscle that is the dorsal-most component of the body musculature. The anterior region attaches to the back of the cranial vault and the dorsal region of the pectoral girdle. The epaxialis is bound to the skin by fibrous connective tissue and internally it inserts over the dorsal portion of the vertebral centra and fin pterygiophores and the neural spines. Posteriorly the epaxialis overlies the modified muscle of the caudal fin and inserts onto the dorsal ray bases of the fin. The anterior epaxial plays a role in feeding and the posterior region is central to locomotion." [GOC:cvs, ISBN:0125296509, ORCiD:0000-0002-2244-7917] xref: TAO:0000349 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000350 @@ -4145,8 +4146,8 @@ def: "Epipleurals lie below the horizontal septum and are posteroventrally direc synonym: "epipleurals" EXACT PLURAL [] xref: TAO:0000350 is_a: ZFA:0000526 ! intermuscular bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000351 @@ -4156,9 +4157,9 @@ def: "Anatomical cluster that is located in the anterior region of the cranium a synonym: "ethmoid region" EXACT [] xref: TAO:0000351 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000352 @@ -4168,9 +4169,9 @@ def: "Portion of tissue which is located between the glomerular layer and intern synonym: "stratum cellulare externum bulbi olfactorii" EXACT [] xref: TAO:0000352 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000353 @@ -4183,8 +4184,8 @@ synonym: "habenulointerpeduncular tract" EXACT [] synonym: "tractus habenulo-interpeduncularis" EXACT [] xref: TAO:0000353 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000354 @@ -4195,9 +4196,9 @@ synonym: "gills" EXACT PLURAL [] xref: TAO:0000354 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001107 ! internal gill bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000272 ! respiratory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000355 @@ -4206,9 +4207,9 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the midbrain." [GOC:CVS, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000355 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000356 @@ -4218,9 +4219,9 @@ def: "Dermal bone that is a small anterior projection present on all of pharynge synonym: "gill rakers" EXACT PLURAL [] xref: TAO:0000356 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000357 @@ -4230,9 +4231,9 @@ def: "Multi-tissue structure which is located in between the primary olfactory f synonym: "stratum glomerulosum bulbi olfactorii" EXACT [] xref: TAO:0000357 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000358 @@ -4241,9 +4242,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is the innermost layer of the corpus cerebelli and consists of small granule cells and larger Golgi cells. The granule cell receive excitatory input from the mossy fibers, and send parallel fibers to the molecular layer where they synapse with Purkinje cell dendrites." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000358 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000359 @@ -4252,8 +4253,8 @@ namespace: zebrafish_anatomy synonym: "commissura habenularum" EXACT [] xref: TAO:0000359 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000360 @@ -4263,10 +4264,10 @@ def: "Cavitated compound organ that will become the adult heart following loopin xref: TAO:0000360 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000149 ! primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000362 @@ -4275,9 +4276,9 @@ namespace: zebrafish_anatomy def: "The hypaxialis consists of that part of the body musculature lying ventral to the midlateral horizontal septum." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-151106-17] xref: TAO:0000362 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000363 @@ -4288,9 +4289,9 @@ synonym: "hypobranchial bones" EXACT PLURAL [] xref: TAO:0000363 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000364 @@ -4302,8 +4303,8 @@ synonym: "hypuralia" EXACT [] synonym: "hypurals" EXACT PLURAL [] xref: TAO:0000364 is_a: ZFA:0000859 ! specialized hemal arch and spine -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000365 @@ -4313,10 +4314,10 @@ def: "Paired dermal bones, likened to a bone tube, positioned lateral to the sup synonym: "nasal bones" EXACT PLURAL [] xref: TAO:0000365 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000366 @@ -4326,9 +4327,9 @@ def: "Hindbrain nucleus that provides descending innervation to the brainstem an synonym: "posterior raphe nucleus" EXACT [] xref: TAO:0000366 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001429 ! raphe nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000367 @@ -4345,8 +4346,8 @@ def: "The outer protective barrier that separates the animal from its aquatic en synonym: "skin" EXACT [] xref: TAO:0000368 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000369 @@ -4356,8 +4357,8 @@ def: "Is a mandibular muscle that develops into the ventral intermandibularis an synonym: "intermandibular muscle" RELATED [ZFIN:ZDB-PUB-060921-12] xref: TAO:0000369 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000370 @@ -4366,9 +4367,9 @@ namespace: zebrafish_anatomy synonym: "intermediate thalamic nuclei" EXACT PLURAL [] xref: TAO:0000370 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000371 @@ -4377,8 +4378,8 @@ namespace: zebrafish_anatomy synonym: "internal pharyngoclavicularae" EXACT PLURAL [] xref: TAO:0000371 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000372 @@ -4386,9 +4387,9 @@ name: interpeduncular nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000372 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000373 @@ -4406,10 +4407,10 @@ def: "Otolith organ comprised of the macula lagena and asteriscus. The lagena i synonym: "lagenas" EXACT PLURAL [] xref: TAO:0000374 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005410 ! pars inferior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000375 @@ -4428,10 +4429,10 @@ alt_id: ZFA:0000489 def: "Dermal bone that is situated under or posterior to the eye and associated with the infraorbital sensory canal." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000376 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000379 @@ -4441,9 +4442,9 @@ def: "Portion of the lateral forebrain bundle that lies in the diencephalon." [G synonym: "lateral forebrain bundles diencephalon" EXACT PLURAL [] xref: TAO:0000379 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007012 ! lateral forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000380 @@ -4452,9 +4453,9 @@ namespace: zebrafish_anatomy synonym: "lateral lemniscus nuclei" EXACT PLURAL [] xref: TAO:0000380 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000381 @@ -4463,9 +4464,9 @@ namespace: zebrafish_anatomy synonym: "lateral line sensory nuclei" EXACT PLURAL [] xref: TAO:0000381 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000382 @@ -4476,8 +4477,8 @@ synonym: "acellular anatomical structures" EXACT PLURAL [] xref: CARO:0000040 xref: TAO:0000382 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000383 @@ -4489,9 +4490,9 @@ synonym: "lateral recti" EXACT PLURAL [] synonym: "posterior rectus" EXACT [ZFIN:ZDB-PUB-970121-6] xref: TAO:0000383 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000384 @@ -4502,8 +4503,8 @@ synonym: "levators arcus palatini" EXACT PLURAL [] xref: TAO:0000384 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000385 @@ -4512,9 +4513,9 @@ namespace: zebrafish_anatomy def: "The lymphatic system consists of blind-ended vessels, fluid and macromolecules collected from interstitial tissue space that serve as a conduit for the development and transport of lymphoid cells." [ZFIN:ZDB-PUB-130322-28] xref: TAO:0000385 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000386 @@ -4526,9 +4527,9 @@ synonym: "sensory macula" EXACT [] synonym: "sensory patch" EXACT [] xref: TAO:0000386 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000387 @@ -4541,9 +4542,9 @@ synonym: "nucleus motorius of nervi vagi" EXACT [] synonym: "nX" EXACT [] synonym: "vagal lobe" RELATED [] is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000297 ! vagal lobe -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000388 @@ -4554,9 +4555,9 @@ synonym: "caudal lobe of cerebellum" EXACT [] synonym: "lobus caudalis cerebelli" EXACT [] xref: TAO:0000388 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000307 ! vestibulolateralis lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000389 @@ -4564,9 +4565,9 @@ name: medial funicular nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000389 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000390 @@ -4576,8 +4577,8 @@ def: "Preglomerular nucleus which is located between the lateral and caudal preg synonym: "medial preglomerular nuclei" EXACT PLURAL [] xref: TAO:0000390 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000391 @@ -4590,9 +4591,9 @@ synonym: "medial zone of D" EXACT [] synonym: "medial zone of dorsal telencephalic area" EXACT [] xref: TAO:0000391 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000392 @@ -4601,9 +4602,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure which is part of the hypothalamus and consists of caudal and ventral zones, and is separated from the dorsal hypothalamic zone by a deep ventral sulcus. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000392 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000393 @@ -4612,8 +4613,8 @@ namespace: zebrafish_anatomy def: "A mesh-like cell arrangement, less compact than an epithelium." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000393 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000394 @@ -4622,9 +4623,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is the outermost layer of the corpus cerebelli and consists largely of axons and dendrites. Other cell types such as stellate and basket neurons are also found in the molecular layer." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000394 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000395 @@ -4635,9 +4636,9 @@ subset: cell_slim synonym: "muscle pioneers somite 2" EXACT PLURAL [] xref: TAO:0000395 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000396 @@ -4646,8 +4647,8 @@ namespace: zebrafish_anatomy def: "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000396 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000397 @@ -4656,9 +4657,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the caudal tuberculum. In trout the nucleus subglomerulosis receives gustatory information." [GOC:cvs, GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-2244-7917, PMID:11923003] xref: TAO:0000397 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000398 @@ -4667,9 +4668,9 @@ namespace: zebrafish_anatomy def: "The nucleus isthmi is a hindbrain nucleus located in the tegmentum of rhombomere 1 close to the secondary gustatory nucleus. It projects to and receives excitatory visual input from the ipsilateral optic tectum and the parvocellular and/or magnocellular superficial pretectal nucleus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100601-20] xref: TAO:0000398 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000399 @@ -4679,21 +4680,21 @@ def: "Nucleus that lies rostral to the isthmic primary nucleus." [ZFIN:ZDB-PUB-9 synonym: "secondary gustatory nucleus trigeminal nuclei" EXACT PLURAL [] xref: TAO:0000399 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000400 name: occipital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "supratemporal lateral line" EXACT [] xref: TAO:0000400 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000401 @@ -4703,9 +4704,9 @@ synonym: "cranial nerve VIII sensory nucleus" EXACT [] synonym: "octaval nerve sensory nuclei" EXACT PLURAL [] xref: TAO:0000401 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000402 @@ -4716,10 +4717,10 @@ synonym: "bulbus olfactorius" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "olfactory lobe" EXACT [] xref: TAO:0000402 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000403 @@ -4729,10 +4730,10 @@ def: "Female reproductive organ. The ovary is a bilobed cavitated organ located synonym: "ovaries" EXACT PLURAL [] xref: TAO:0000403 is_a: ZFA:0000413 ! gonad -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000303 ! female organism relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000404 @@ -4741,9 +4742,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the synencephalon and is located adjacent to the caudal commissure. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000404 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000405 @@ -4755,9 +4756,9 @@ synonym: "occulomotor" EXACT [] synonym: "oculomotor nerve" EXACT [] xref: TAO:0000405 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000406 @@ -4767,9 +4768,9 @@ def: "Diencephalic nucleus that is part of the superficial pretectum. From Neuro synonym: "parvocellular superficial pretectal nuclei" EXACT PLURAL [] xref: TAO:0000406 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000687 ! superficial pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000407 @@ -4779,9 +4780,9 @@ def: "Anatomical cluster of paired dermal and endochondral bones that attaches t synonym: "pectoral girdles" EXACT PLURAL [] xref: TAO:0000407 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000408 @@ -4791,9 +4792,9 @@ def: "Diencephalic nucleus which is located between the ventral thalamus and the synonym: "periventricular nucleus of posterior tuberculum" EXACT [] xref: TAO:0000408 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000410 @@ -4803,9 +4804,9 @@ def: "Dermal bone that is part of the pectoral girdle and located ventral to the synonym: "postcleithra" EXACT PLURAL [] xref: TAO:0000410 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000411 @@ -4815,9 +4816,9 @@ def: "Is an otic epithelium that will mature into the posterior crista." [GOC:ym synonym: "posterior crista primordia" EXACT PLURAL [] xref: TAO:0000411 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000412 @@ -4828,8 +4829,8 @@ synonym: "posterior semicircular canal primordia" RELATED PLURAL [] synonym: "posterior semicircular canal primordium" RELATED [] xref: TAO:0000412 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000413 @@ -4841,10 +4842,10 @@ synonym: "mature gonad" RELATED [] xref: TAO:0000413 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005272 ! immature gonad -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000632 ! reproductive system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000414 @@ -4853,9 +4854,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that is fated to become cephalic mesoderm." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000414 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000415 @@ -4865,8 +4866,8 @@ def: "Sphincter at the junction of the esophagus and pneumatic duct." [GOC:cvs, synonym: "oesophagial sphincter" EXACT [] xref: TAO:0000415 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000416 @@ -4875,8 +4876,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become endoderm. Determined by fate mapping." [ZFIN:ZDB-PUB-961014-608] xref: TAO:0000416 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000417 @@ -4888,9 +4889,9 @@ synonym: "presumptive spinal cord neural plate" EXACT [] synonym: "presumptive spinal cord neural rod" EXACT [] xref: TAO:0000417 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0007015 ! posterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000418 @@ -4899,9 +4900,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the dorsal part of the diencephalon, caudal to the telencephalon, rostral to the midbrain optic tectum; the major sensory input to the pretectum is visual. From The Laboratory Fish." [GOC:mh, ISBN:0125296509, ORCiD:0000-0001-9114-8737] xref: TAO:0000418 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000419 @@ -4912,12 +4913,12 @@ synonym: "pterosphenoids" EXACT PLURAL [] xref: TAO:0000419 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001515 ! taenia marginalis posterior -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005482 ! prootic-pterosphenoid joint relationship: overlaps ZFA:0005560 ! parasphenoid-basioccipital joint relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000420 @@ -4926,8 +4927,8 @@ namespace: zebrafish_anatomy synonym: "renal arteries" EXACT PLURAL [] xref: TAO:0000420 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000421 @@ -4936,9 +4937,9 @@ namespace: zebrafish_anatomy def: "Reticular formation is a complex network of neurons and diffuse nuclei that extends from the spinal cord centrally along the length of the brain to the mesencephalon. It s a dense, almost impenetrable network of seemingly random scattered nerve cells. The reticular formation integrates sensory inputs." [ISBN:0865777101] xref: TAO:0000421 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000422 @@ -4949,10 +4950,10 @@ synonym: "retroarticulars" EXACT PLURAL [] xref: TAO:0000422 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0005904 ! retroarticular process -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005618 ! anguloarticular-retroarticular joint relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000423 @@ -4963,21 +4964,21 @@ synonym: "ACV" EXACT [] synonym: "rostral cardinal vein" EXACT [] xref: TAO:0000423 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000096 ! cardinal system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000424 name: opercular lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "opercular lateral lines" EXACT PLURAL [] xref: TAO:0000424 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000425 @@ -4990,9 +4991,9 @@ synonym: "rostral lateral line nerve" EXACT [] xref: TAO:0000425 is_a: ZFA:0000641 ! cranial nerve is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000426 @@ -5003,9 +5004,9 @@ synonym: "anterior parvocellular preoptic nucleus" EXACT [] synonym: "rostral parvocellular preoptic nuclei" EXACT PLURAL [] xref: TAO:0000426 is_a: ZFA:0001680 ! parvocellular preoptic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000427 @@ -5016,9 +5017,9 @@ synonym: "anterior thalamic nucleus" EXACT [] synonym: "nucleus anterior thalami" EXACT [] xref: TAO:0000427 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000653 ! dorsal thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000428 @@ -5028,10 +5029,10 @@ def: "Otolith organ comprised of the macula saccule and sagitta. The lagena is p synonym: "sacculus" EXACT [] xref: TAO:0000428 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005410 ! pars inferior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000429 @@ -5040,10 +5041,10 @@ namespace: zebrafish_anatomy def: "The scaphium is a modification of NA 1 in which the neural arch is reduced and fused to a cup-shaped ossification of membrane bone, the concha. The second Weberian ossicle, consisting of three parts: the concha, the ascending process, and the articulating process." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000429 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001167 ! vertebra 1 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000430 @@ -5052,10 +5053,10 @@ namespace: zebrafish_anatomy def: "White matter connecting the primary gustatory nuclei to the secondary gustatory nucleus in the isthmus." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000430 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000431 @@ -5067,9 +5068,9 @@ synonym: "semicircular canals" EXACT PLURAL [] synonym: "semicircular duct" EXACT [] xref: TAO:0000431 is_a: ZFA:0007114 ! anatomical conduit -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005409 ! pars superior ear -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000433 @@ -5079,9 +5080,9 @@ synonym: "NVs" RELATED [] synonym: "sensory trigeminal nuclei" EXACT PLURAL [] xref: TAO:0000433 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000434 @@ -5089,8 +5090,8 @@ name: skeletal system namespace: zebrafish_anatomy xref: TAO:0000434 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000435 @@ -5102,9 +5103,9 @@ synonym: "optic" EXACT [] synonym: "optic nerve" EXACT [] xref: TAO:0000435 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000338 ! diencephalic white matter -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000436 @@ -5113,11 +5114,11 @@ namespace: zebrafish_anatomy def: "Organ that filters the blood removing defective blood cells. The spleen is a dark red organ, located in the peritoneal cavity, adjacent to one of the liver lobes. The spleen consists of red pulp composed of erythrocytes and thrombocytes and white pulp, composed of macrophages, reticular cells and reticulin fibers." [ZFIN:ZDB-PUB-110609-55] xref: TAO:0000436 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0005023 ! hematopoietic system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000437 @@ -5137,9 +5138,9 @@ synonym: "parhyural" EXACT [] synonym: "phy" EXACT [] xref: TAO:0000438 is_a: ZFA:0000859 ! specialized hemal arch and spine -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000557 ! preural 1 vertebra -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000439 @@ -5150,9 +5151,9 @@ synonym: "abductor superficialis pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "superficial pelvic abductors" EXACT PLURAL [] xref: TAO:0000439 is_a: ZFA:0005269 ! abductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000440 @@ -5164,9 +5165,9 @@ synonym: "anterior raphe nucleus" EXACT [] synonym: "dorsal raphe nucleus" RELATED [] xref: TAO:0000440 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001429 ! raphe nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000441 @@ -5175,9 +5176,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the preoptic area and is ventrolateral to the caudal parvocellular preoptic nucleus. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000441 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000442 @@ -5187,22 +5188,22 @@ def: "Supraneurals independent, median, elongate, rod-like cartilages or bones i synonym: "sn" EXACT [] xref: TAO:0000442 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000443 name: supraorbital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:JCN 421-\:189-198] +def: "One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "supraorbital lateral lines" EXACT PLURAL [] synonym: "supraorbital line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000443 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000444 @@ -5212,9 +5213,9 @@ synonym: "hyopalatine" EXACT [] synonym: "suspensoria" EXACT [] xref: TAO:0000444 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000445 @@ -5230,9 +5231,9 @@ synonym: "tectum opticum" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000445 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000446 @@ -5240,8 +5241,8 @@ name: tecto-bulbar tract namespace: zebrafish_anatomy xref: TAO:0000446 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000447 @@ -5251,9 +5252,9 @@ def: "Portion of tissue that is part of the primitive meninx which forms a fold, synonym: "tela choroidea" RELATED [] xref: TAO:0000447 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001355 ! primitive meninx -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000448 @@ -5262,10 +5263,10 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located ventral to the medial preglomerular nucleus in the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000448 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000449 @@ -5277,9 +5278,9 @@ synonym: "tori longitudinalis" EXACT PLURAL [] xref: TAO:0000449 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000450 @@ -5289,9 +5290,9 @@ synonym: "motor nucleus IV" EXACT [] synonym: "nIV" EXACT [] xref: TAO:0000450 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000451 @@ -5302,12 +5303,12 @@ synonym: "breathing valve" RELATED [] synonym: "buccal valve" RELATED [] synonym: "maxillary valve" EXACT [] synonym: "upper internal lip" RELATED [ZFIN:ZDB-PUB-060921-12] -synonym: "upper semilunar valve " EXACT [ZFIN:ZDB-PUB-060921-12] +synonym: "upper semilunar valve" EXACT [ZFIN:ZDB-PUB-060921-12] xref: TAO:0000451 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000452 @@ -5316,11 +5317,11 @@ namespace: zebrafish_anatomy def: "The urohyal is a median dermal bone that ossifies in the membrane between the paired sternohyoideus muscles ventral to the anterior end of copula 1. It is an unpaired ossification of the tendon of the sternohyoideos muscles in basal teleosts, and it is paired in catfishes (Arratia and Schultze, 1990)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000452 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005457 ! dorsal hypohyal-urohyal joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000453 @@ -5332,9 +5333,9 @@ synonym: "vagal nerve" EXACT [] synonym: "vagus nerve" EXACT [] xref: TAO:0000453 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000454 @@ -5343,9 +5344,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the central pretectum and is ventromedial to the magnocellular superficial pretectal nucleus and the caudal pretectal nucleus. The ventral accessory optic nucleus is very large in zebrafish as compared to other cyprinids. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000454 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000455 @@ -5357,9 +5358,9 @@ synonym: "flexor caudalis ventralis superioris" EXACT [] synonym: "ventral flexor" RELATED [] xref: TAO:0000455 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000456 @@ -5371,8 +5372,8 @@ synonym: "ventral division of ventral telencephalic area" RELATED [] synonym: "ventral nucleus of V" EXACT [] xref: TAO:0000456 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000457 @@ -5384,9 +5385,9 @@ synonym: "inferior rectus" EXACT [ZFIN:ZDB-PUB-110512-18] synonym: "ventral recti" EXACT PLURAL [] xref: TAO:0000457 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000458 @@ -5395,9 +5396,9 @@ namespace: zebrafish_anatomy synonym: "prethalamus" EXACT [ZFIN:ZDB-PUB-060207-11] xref: TAO:0000458 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001215 ! thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000459 @@ -5405,9 +5406,9 @@ name: ventromedial thalamic nucleus namespace: zebrafish_anatomy xref: TAO:0000459 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000460 @@ -5424,9 +5425,9 @@ def: "A group of modified neural arches and spines of the first four vertebrae. synonym: "Weberian ossicles" EXACT PLURAL [] xref: TAO:0000461 is_a: ZFA:0001491 ! solid compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000462 @@ -5437,9 +5438,9 @@ synonym: "abductors hyohyoid" EXACT PLURAL [] synonym: "hyohyoideus abductor" EXACT [] xref: TAO:0000462 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007052 ! hyohyoideus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000463 @@ -5448,20 +5449,20 @@ namespace: zebrafish_anatomy synonym: "adductors" EXACT PLURAL [] xref: TAO:0000463 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000464 name: otic lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "otic lateral lines" EXACT PLURAL [] xref: TAO:0000464 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000465 @@ -5472,8 +5473,8 @@ synonym: "adductor opercula" EXACT [] synonym: "adductor operculae" EXACT PLURAL [] xref: TAO:0000465 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000466 @@ -5484,9 +5485,9 @@ synonym: "anal depressors" EXACT PLURAL [] synonym: "depressores anales" RELATED [ZFIN:ZDB-PUB-171118-8] xref: TAO:0000466 is_a: ZFA:0005270 ! depressor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000467 @@ -5499,11 +5500,11 @@ is_a: ZFA:0001590 ! dermal bone is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001644 ! articular cartilage relationship: develops_from ZFA:0001645 ! angular bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005618 ! anguloarticular-retroarticular joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000468 @@ -5513,9 +5514,9 @@ def: "Is an otic epithelium that will mature into the anterior crista." [GOC:ymb synonym: "anterior crista primordia" EXACT PLURAL [] xref: TAO:0000468 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000469 @@ -5526,8 +5527,8 @@ synonym: "anterior semicircular canal primordia" RELATED PLURAL [] synonym: "anterior semicircular canal primordium" RELATED [] xref: TAO:0000469 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000470 @@ -5539,9 +5540,9 @@ synonym: "area preoptica" EXACT [] synonym: "preoptic region" EXACT [] xref: TAO:0000470 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000471 @@ -5551,9 +5552,9 @@ def: "Cavitated compound organ that receives inflow of deoxygenated blood and de xref: TAO:0000471 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001718 ! presumptive atrium heart tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000472 @@ -5563,14 +5564,14 @@ def: "Large median unpaired cartilage bone that contacts the exoccipital, epioti xref: TAO:0000472 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005423 ! basioccipital-exoccipital joint relationship: overlaps ZFA:0005560 ! parasphenoid-basioccipital joint relationship: overlaps ZFA:0005613 ! basioccipital-prootic joint relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000473 @@ -5580,8 +5581,8 @@ def: "Muscle system in the trunk." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "body musculature" EXACT [] xref: TAO:0000473 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000474 @@ -5591,9 +5592,9 @@ def: "Small membrane bone homologous with a cartilage bone in more basal fishes synonym: "opisthotic" EXACT [] xref: TAO:0000474 is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000189 ! otic region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000475 @@ -5603,9 +5604,9 @@ def: "Diencephalic nucleus which is located anterior to the caudal tuberal nucle synonym: "PVO" EXACT [] xref: TAO:0000475 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000476 @@ -5615,12 +5616,12 @@ def: "Dermal bone that is a bilaterally paired and flattened element that suppor synonym: "branchiostegal rays" EXACT PLURAL [] xref: TAO:0000476 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005465 ! ceratohyal-branchiostegal ray joint relationship: overlaps ZFA:0005498 ! epihyal-branchiostegal ray joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000477 @@ -5634,11 +5635,11 @@ synonym: "postcardinal vein" EXACT [] xref: TAO:0000477 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005077 ! vascular cord -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000479 @@ -5648,10 +5649,10 @@ def: "Brainstem tract which carries cerebellar afferents from the dorsal tegment synonym: "posterior mesencephalo-cerebellar tract" EXACT [] xref: TAO:0000479 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000643 ! rostral cerebellar tract relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000480 @@ -5661,8 +5662,8 @@ def: "Hindbrain nucleus which is part of the medulla oblongata and is a mechanor synonym: "nucleus octavolateralis caudalis" EXACT [] xref: TAO:0000480 is_a: ZFA:0000381 ! lateral line sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000481 @@ -5672,8 +5673,8 @@ def: "Preglomerular nucleus which is the most caudomedial of the preglomerular n synonym: "nucleus praeglomerulosus caudalis" EXACT [] xref: TAO:0000481 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000482 @@ -5683,9 +5684,9 @@ def: "Diencephalic nucleus which is located posterior to the paraventricular org synonym: "posterior tuberal nucleus" EXACT [] xref: TAO:0000482 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000484 @@ -5694,8 +5695,8 @@ namespace: zebrafish_anatomy synonym: "coeliac-mesenteric artery" EXACT [] xref: TAO:0000484 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000485 @@ -5707,9 +5708,9 @@ synonym: "central nucleus of the inferior lobe" EXACT [] synonym: "nucleus centralis lobi inferioris hypothalami" EXACT [] xref: TAO:0000485 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000165 ! inferior lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000486 @@ -5719,7 +5720,7 @@ def: "Paired dermal bone that covers the hind part of the cranium, overlapping t synonym: "post parietal" EXACT [] xref: TAO:0000486 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005607 ! inter-parietal joint relationship: overlaps ZFA:0005608 ! frontal-parietal joint relationship: overlaps ZFA:0005609 ! supraoccipital-parietal joint @@ -5728,7 +5729,7 @@ relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000487 @@ -5740,9 +5741,9 @@ synonym: "central zone of D" EXACT [] synonym: "Dc" EXACT [ZFIN:ZDB-PUB-150226-6] xref: TAO:0000487 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000488 @@ -5752,9 +5753,9 @@ def: "Endochondral bone that is bilaterally paired and forms part of the ventral synonym: "ceratobranchial bones" EXACT PLURAL [] xref: TAO:0000488 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000490 @@ -5764,8 +5765,8 @@ def: "Cerebellar commissure which is located within the ventral boundary zone be synonym: "cerebellar commissure" EXACT [] xref: TAO:0000490 is_a: ZFA:0001708 ! cerebellar white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000491 @@ -5778,8 +5779,8 @@ synonym: "CPT" RELATED [ZFIN:ZDB-PUB-961014-1268] synonym: "Ctub" RELATED [ZFIN:ZDB-PUB-120424-30] xref: TAO:0000491 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000492 @@ -5787,9 +5788,9 @@ name: coracoradialis namespace: zebrafish_anatomy xref: TAO:0000492 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000493 @@ -5797,9 +5798,9 @@ name: decussation of medial funicular nucleus namespace: zebrafish_anatomy xref: TAO:0000493 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000494 @@ -5808,9 +5809,9 @@ namespace: zebrafish_anatomy synonym: "deep white zones" EXACT PLURAL [] xref: TAO:0000494 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000495 @@ -5820,9 +5821,9 @@ def: "Plate like dermal bone with usually only one neuromast pore (Nelson, 1969) synonym: "dermosphenotic" EXACT [] xref: TAO:0000495 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000496 @@ -5833,9 +5834,9 @@ synonym: "organ" EXACT [] xref: CARO:0000024 xref: TAO:0000496 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000497 @@ -5846,23 +5847,23 @@ synonym: "adductor profundus pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "pelvic adductors profundus" EXACT PLURAL [] xref: TAO:0000497 is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000498 name: dilatator operculi namespace: zebrafish_anatomy def: "Mandibular muscle that inserts along the dorsolateral faces of the opercles. Responsible for opercular abduction." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-020703-2, ZFIN:ZDB-PUB-080306-33] -synonym: " dilatator opercula" EXACT [] +synonym: "dilatator opercula" EXACT [] synonym: "dilator opercula" RELATED [] synonym: "dilators operculi" RELATED PLURAL [] xref: TAO:0000498 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000499 @@ -5875,8 +5876,8 @@ synonym: "dorsal arrectors" EXACT PLURAL [] xref: TAO:0000499 is_a: ZFA:0005275 ! arrector muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000500 @@ -5887,9 +5888,9 @@ synonym: "dorsal erectors" EXACT PLURAL [] synonym: "erector dorsalis" EXACT [] xref: TAO:0000500 is_a: ZFA:0005267 ! erector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000501 @@ -5898,9 +5899,9 @@ namespace: zebrafish_anatomy synonym: "funiculus dorsalis" EXACT [] xref: TAO:0000501 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000502 @@ -5909,8 +5910,8 @@ namespace: zebrafish_anatomy def: "Trigeminal motor nucleus that is located dorsal to the lateral longitudinal fascicle." [ISBN:3764351209] xref: TAO:0000502 is_a: ZFA:0001365 ! trigeminal motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000503 @@ -5919,8 +5920,8 @@ namespace: zebrafish_anatomy synonym: "dorsal oblique branchial muscles" EXACT PLURAL [] xref: TAO:0000503 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000504 @@ -5929,8 +5930,8 @@ namespace: zebrafish_anatomy synonym: "dorsal retractors" EXACT PLURAL [] xref: TAO:0000504 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000505 @@ -5943,9 +5944,9 @@ synonym: "dorsal telencephalic area" EXACT [] synonym: "pallium" EXACT [] xref: TAO:0000505 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000506 @@ -5958,9 +5959,9 @@ synonym: "dorsal zone of D" EXACT [] synonym: "dorsal zone of dorsal telencephalic area" EXACT [] xref: TAO:0000506 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000507 @@ -5970,8 +5971,8 @@ def: "Some or all epineural bones ossify free from the neural arches in most tel synonym: "epineurals" EXACT PLURAL [] xref: TAO:0000507 is_a: ZFA:0000526 ! intermuscular bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000508 @@ -5981,9 +5982,9 @@ def: "Internal skeletal supports of the pelvic fin." [TAO:curator] synonym: "pelvic radials" EXACT PLURAL [] xref: TAO:0000508 is_a: ZFA:0000271 ! radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000509 @@ -5992,9 +5993,9 @@ namespace: zebrafish_anatomy def: "Brain structure which is part of the diencephalon and consists of the dorsal and ventral nuclei of the habenula, and two dorsal outgrowths, the epiphysis and the saccus dorsalis. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] xref: TAO:0000509 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000510 @@ -6003,8 +6004,8 @@ namespace: zebrafish_anatomy synonym: "external levators" EXACT PLURAL [] xref: TAO:0000510 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000511 @@ -6014,8 +6015,8 @@ def: "Muscle system surrounding the eye. The extraocular musculature is derived synonym: "ocular musculature" RELATED [] xref: TAO:0000511 is_a: ZFA:0000328 ! cephalic musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000512 @@ -6024,12 +6025,12 @@ namespace: zebrafish_anatomy def: "Hindbrain nucleus that doesn't project to the spinal cord." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-970218-12] synonym: "lobus facialis" EXACT [] synonym: "LVII" EXACT [ZFIN:ZDB-PUB-961014-1280] -synonym: "tuberculum impar of Herrick " RELATED [] +synonym: "tuberculum impar of Herrick" RELATED [] xref: TAO:0000512 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000513 @@ -6041,9 +6042,9 @@ synonym: "fast muscle cells somite 1" EXACT PLURAL [] synonym: "fast muscle fiber somite 1" EXACT [] xref: TAO:0000513 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000514 @@ -6052,7 +6053,7 @@ namespace: zebrafish_anatomy def: "Large elongated paired dermal bones that roof the cranium and bear part of the supraorbital canal. The frontal bones cover the upper edge of the lateral ethmoid, orbitosphenoid and pterosphenoids and overlaps the parietal bone posteriorly." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000514 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005468 ! frontal-pterotic joint relationship: overlaps ZFA:0005472 ! inter-frontal joint relationship: overlaps ZFA:0005608 ! frontal-parietal joint @@ -6060,7 +6061,7 @@ relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000516 @@ -6080,9 +6081,9 @@ xref: TAO:0000516 xref: TAO:0001352 is_a: ZFA:0001477 ! portion of tissue is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000517 @@ -6091,9 +6092,9 @@ namespace: zebrafish_anatomy synonym: "lobus glossopharyngei" EXACT [] xref: TAO:0000517 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000518 @@ -6104,9 +6105,9 @@ synonym: "central gray" EXACT [] synonym: "central grey" EXACT [] xref: TAO:0000518 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000519 @@ -6118,9 +6119,9 @@ synonym: "ventral arcocentrum" EXACT [] xref: TAO:0000519 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001361 ! basiventral -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000326 ! caudal vertebra -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000520 @@ -6128,8 +6129,8 @@ name: horizontal commissure namespace: zebrafish_anatomy xref: TAO:0000520 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000521 @@ -6139,10 +6140,10 @@ def: "Muscles that insert into skeletal elements of pharyngeal arch 2 (hyoid arc synonym: "hyoid muscles" EXACT PLURAL [] xref: TAO:0000521 is_a: ZFA:0001652 ! head muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001611 ! pharyngeal arch 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000522 @@ -6153,9 +6154,9 @@ synonym: "hyohyoideus inferior" RELATED [] synonym: "inferior hyohyoids" EXACT PLURAL [] xref: TAO:0000522 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007052 ! hyohyoideus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000523 @@ -6163,21 +6164,21 @@ name: inferior reticular formation namespace: zebrafish_anatomy xref: TAO:0000523 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000542 ! medial column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000524 name: infraorbital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "infraorbital line" EXACT [] xref: TAO:0000524 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000525 @@ -6186,10 +6187,10 @@ namespace: zebrafish_anatomy def: "Third Weberian ossicle. The intercalarium is a Y- or T-shaped modification of neural arch 2 in which an anteriolateral process (the manubrium) is embedded in the interossicular ligament; other parts include the ascending and articulating processes." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0000525 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001168 ! vertebra 2 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000526 @@ -6199,9 +6200,9 @@ def: "Axial bone which is a segmental ossification that forms in the myoseptum; synonym: "intermuscular bones" EXACT PLURAL [] xref: TAO:0000526 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000527 @@ -6212,9 +6213,9 @@ synonym: "infrapharyngobranchial" EXACT [] synonym: "pharyngobranchials" EXACT [] xref: TAO:0000527 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000528 @@ -6226,9 +6227,9 @@ synonym: "interradiali" EXACT PLURAL [] synonym: "interradialis" EXACT [] xref: TAO:0000528 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000628 ! caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000529 @@ -6238,11 +6239,11 @@ def: "Cavitated compound organ located in the pleuroperitoneal cavity where hema synonym: "mesonephros" EXACT [] xref: TAO:0000529 is_a: ZFA:0001490 ! cavitated compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000530 @@ -6255,9 +6256,9 @@ synonym: "utricular otolith" EXACT [] synonym: "utriculith" EXACT [] xref: TAO:0000530 is_a: ZFA:0001617 ! otolith -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000700 ! utricle -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000531 @@ -6266,9 +6267,9 @@ namespace: zebrafish_anatomy synonym: "lateral columns" EXACT PLURAL [] xref: TAO:0000531 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000421 ! reticular formation -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000532 @@ -6279,9 +6280,9 @@ synonym: "lateral division" EXACT [] synonym: "valvula cerebelli, pars lateralis" EXACT [] xref: TAO:0000532 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000533 @@ -6290,9 +6291,9 @@ namespace: zebrafish_anatomy synonym: "lateral funiculi" EXACT PLURAL [] xref: TAO:0000533 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000534 @@ -6306,9 +6307,9 @@ synonym: "lateral longitundinal fasciculus" EXACT [] synonym: "LLF" RELATED [] xref: TAO:0000534 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000535 @@ -6317,9 +6318,9 @@ namespace: zebrafish_anatomy synonym: "lateral reticular nuclei" EXACT PLURAL [] xref: TAO:0000535 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000531 ! lateral column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000536 @@ -6332,9 +6333,9 @@ synonym: "lateral zone of D" EXACT [] synonym: "lateral zone of dorsal telencephalic area" EXACT [] xref: TAO:0000536 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000537 @@ -6344,8 +6345,8 @@ def: "Hyoid muscle that originates at the ventrolateral margin of the pterotic a synonym: "levator operculae" EXACT [] xref: TAO:0000537 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000538 @@ -6356,9 +6357,9 @@ synonym: "dorsal rib" EXACT [] synonym: "pleural rib" EXACT [] xref: TAO:0000538 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000539 @@ -6369,9 +6370,9 @@ comment: Sometimes considered part of the reticular formation. synonym: "loci coeruleus" EXACT PLURAL [] xref: TAO:0000539 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000540 @@ -6380,8 +6381,8 @@ namespace: zebrafish_anatomy synonym: "magnocellular octaval nuclei" EXACT PLURAL [] xref: TAO:0000540 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000541 @@ -6392,8 +6393,8 @@ subset: cell_slim synonym: "marginal blastomeres" EXACT PLURAL [] xref: TAO:0000541 is_a: ZFA:0000093 ! blastomere -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000005 ! Cleavage:16-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000005 ! cleavage:16-cell [Term] id: ZFA:0000542 @@ -6403,9 +6404,9 @@ synonym: "medial column of the reticular formation" EXACT [] synonym: "medial columns" EXACT PLURAL [] xref: TAO:0000542 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000421 ! reticular formation -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000543 @@ -6415,8 +6416,8 @@ def: "The medial longitudinal fasciculus (MLF) is a pair of crossed fiber tracts synonym: "MLF" RELATED [] xref: TAO:0000543 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000544 @@ -6432,10 +6433,10 @@ namespace: zebrafish_anatomy def: "Brain structure that is located ventrocaudal to the cerebellum and just anterior to the spinal cord and contains the sensory and motor nuclei of six cranial nerves. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata." [ISBN:3764351209] xref: TAO:0000545 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000546 @@ -6446,9 +6447,9 @@ synonym: "renal duct" RELATED [] synonym: "Wolffian duct" RELATED [] xref: TAO:0000546 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000163 ! renal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000547 @@ -6457,10 +6458,10 @@ namespace: zebrafish_anatomy xref: TAO:0000547 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001290 ! stomodeum -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000548 @@ -6469,24 +6470,24 @@ namespace: zebrafish_anatomy def: "Anatomical system consisting of the cardiac, skeletal and smooth muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000548 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000549 name: posttemporal namespace: zebrafish_anatomy def: "Paired fin bone that attaches the pectoral girdle to the skull via two projections contacting the epiotic and intercalar bones, and carry the main laterosensory canal." [GOC:mh, ORCiD:0000-0001-9114-8737] -synonym: "post-temporal " RELATED [] +synonym: "post-temporal" RELATED [] synonym: "postemporal" EXACT [] xref: TAO:0000549 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005889 ! epiotic-posttemporal joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000407 ! pectoral girdle relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000550 @@ -6497,10 +6498,10 @@ synonym: "nares" EXACT PLURAL [] synonym: "nostril" EXACT [] xref: TAO:0000550 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000551 @@ -6509,9 +6510,9 @@ namespace: zebrafish_anatomy def: "Hindbrain nucleus in the tegmental region of rhombomere 1. The cells of the nucleus are granular and lie at the ventral border of the cerebellum and brain stem." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100601-20, ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000551 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000552 @@ -6521,9 +6522,9 @@ def: "Nucleus located in the midbrain tegmentum that controls motor coordination synonym: "red nucleus" EXACT [] xref: TAO:0000552 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000553 @@ -6533,9 +6534,9 @@ synonym: "motor nucleus III" EXACT [] synonym: "nIII" EXACT [] xref: TAO:0000553 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000554 @@ -6547,9 +6548,9 @@ synonym: "nasal sensory epithelium" EXACT [] xref: TAO:0000554 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0001431 ! primitive olfactory epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000555 @@ -6563,8 +6564,8 @@ synonym: "opercular cover" RELATED [ZFIN:ZDB-PUB-030304-18] synonym: "operculum" EXACT [] xref: TAO:0000555 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000556 @@ -6575,8 +6576,8 @@ synonym: "chiasma opticum" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "optic commissure" EXACT [] xref: TAO:0000556 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000557 @@ -6589,8 +6590,8 @@ synonym: "pu1" EXACT [] synonym: "second last vertebra" EXACT [] xref: TAO:0000557 is_a: ZFA:0000734 ! preural vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000558 @@ -6602,9 +6603,9 @@ synonym: "posterior sensory patch" EXACT [] synonym: "posteromedial macula" EXACT [] xref: TAO:0000558 is_a: ZFA:0000386 ! macula -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001671 ! macula communis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000559 @@ -6614,9 +6615,9 @@ def: "Cavitated compound organ that is a fluid filed chamber with a maculae on synonym: "otolith organs" EXACT PLURAL [] xref: TAO:0000559 is_a: ZFA:0001490 ! cavitated compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000560 @@ -6626,10 +6627,10 @@ def: "Duct that connects ovary with cloacal chamber. In zebrafish the oviduct i synonym: "oviducts" EXACT PLURAL [] xref: TAO:0000560 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000303 ! female organism relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000561 @@ -6638,14 +6639,14 @@ namespace: zebrafish_anatomy def: "Long, unpaired median dermal bone that runs almost the entire length of the cranium. Contacts the prevomer anteriorly, and the prootic and basioccipital posteriorly. Anteriorly the parasphenoid is a long, thin bone that widens abruptly at the point of contact with the prootic." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000561 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000563 @@ -6656,10 +6657,10 @@ synonym: "pectoral fin muscle" RELATED [] xref: TAO:0000563 is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001000 ! mesenchyme pectoral fin -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005924 ! middle migratory muscle precursor stream relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000564 @@ -6670,9 +6671,9 @@ synonym: "abductor profundus pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "pelvic abductors profundus" EXACT PLURAL [] xref: TAO:0000564 is_a: ZFA:0005269 ! abductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000565 @@ -6682,9 +6683,9 @@ def: "Anatomical cluster that consists of the paired basipterygia which support synonym: "pelvic girdles" EXACT PLURAL [] xref: TAO:0000565 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000566 @@ -6701,9 +6702,9 @@ synonym: "posterior semicircular canal sensory patches" EXACT PLURAL [] xref: TAO:0000566 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000411 ! posterior crista primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000567 @@ -6713,11 +6714,11 @@ def: "The premaxilla is a bone of the upper jaw. It is an L-shaped bone first vi synonym: "premaxillae" EXACT PLURAL [] xref: TAO:0000567 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005475 ! inter-premaxillary joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000568 @@ -6726,8 +6727,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become blood. Determined by marker expression." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000568 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000569 @@ -6737,10 +6738,10 @@ def: "Embryonic structure that gives rise to the hindbrain." [GOC:mh, ORCiD:0000 synonym: "presumptive rhombencephalon" EXACT [] xref: TAO:0000569 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007015 ! posterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000570 @@ -6751,9 +6752,9 @@ def: "Portion of tissue that is part of the anterior neural keel and will form t synonym: "eye field" EXACT [] xref: TAO:0000570 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000571 @@ -6762,9 +6763,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the telencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000571 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000573 @@ -6774,9 +6775,9 @@ def: "Portion of tissue which is the innermost layer of the olfactory bulb. From synonym: "stratum cellulare internum bulbi olfactorii" EXACT [] xref: TAO:0000573 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000574 @@ -6785,9 +6786,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the diencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000574 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000575 @@ -6800,14 +6801,14 @@ is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: develops_from ZFA:0001425 ! basal plate cartilage relationship: develops_from ZFA:0001500 ! auditory capsule -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005887 ! posterior basicapsular commissure relationship: overlaps ZFA:0005482 ! prootic-pterosphenoid joint relationship: overlaps ZFA:0005613 ! basioccipital-prootic joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000576 @@ -6818,13 +6819,13 @@ synonym: "autopterotic" EXACT [] xref: TAO:0000576 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001500 ! auditory capsule -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005468 ! frontal-pterotic joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000577 @@ -6834,9 +6835,9 @@ def: "Afferent vein that supplies the kidney." [GOC:cvs, ISBN:9781118222942, ORC synonym: "renal portal veins" EXACT PLURAL [] xref: TAO:0000577 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000578 @@ -6849,14 +6850,14 @@ synonym: "rostral ceratohyal" EXACT [] xref: TAO:0000578 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005465 ! ceratohyal-branchiostegal ray joint relationship: overlaps ZFA:0005466 ! ceratohyal-ventral hypohyal joint relationship: overlaps ZFA:0005467 ! ceratohyal-dorsal hypohyal joint relationship: overlaps ZFA:0005497 ! epihyal-ceratohyal joint relationship: overlaps ZFA:0005859 ! ceratohyal-interhyal joint relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000579 @@ -6866,10 +6867,10 @@ def: "Brainstem tract which carries cerebellar afferents from the pretectum and synonym: "anterior mesencephalo-cerebellar tract" EXACT [] xref: TAO:0000579 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000643 ! rostral cerebellar tract relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000580 @@ -6880,8 +6881,8 @@ synonym: "anterior preglomerular nucleus" EXACT [] synonym: "nucleus praeglomerulosus anterior" EXACT [] xref: TAO:0000580 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000581 @@ -6892,9 +6893,9 @@ synonym: "anterior tuberal nucleus" EXACT [] synonym: "nucleus tuberis anterior" EXACT [] xref: TAO:0000581 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000582 @@ -6902,9 +6903,9 @@ name: saccus dorsalis namespace: zebrafish_anatomy xref: TAO:0000582 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000583 @@ -6915,9 +6916,9 @@ synonym: "scapulae" EXACT PLURAL [] xref: TAO:0000583 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000585 @@ -6926,8 +6927,8 @@ namespace: zebrafish_anatomy def: "Cranial cartilage which is a small median cartilage located between the premaxillae and anterodorsal to the ethmoid." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000585 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000586 @@ -6940,8 +6941,8 @@ synonym: "pu2" EXACT [] synonym: "third last vertebra" EXACT [] xref: TAO:0000586 is_a: ZFA:0000734 ! preural vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000587 @@ -6953,11 +6954,11 @@ xref: TAO:0000587 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001506 ! tectum synoticum relationship: develops_from ZFA:0001515 ! taenia marginalis posterior -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000588 @@ -6966,16 +6967,16 @@ namespace: zebrafish_anatomy def: "The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)" [GOC:mh, ORCiD:0000-0001-9114-8737] synonym: "auditory ganglion" EXACT [] synonym: "gVIII" EXACT [] -synonym: "octaval ganglion " EXACT [] +synonym: "octaval ganglion" EXACT [] synonym: "sag" EXACT [] synonym: "statoacoustic ganglia" EXACT PLURAL [] xref: TAO:0000588 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000138 ! otic placode relationship: develops_from ZFA:0000762 ! facio-acoustic neural crest -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000589 @@ -6984,9 +6985,9 @@ namespace: zebrafish_anatomy def: "Anatomical groove which separates the dorsal and medial zones of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [GOC:cvs, GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-2244-7917] xref: TAO:0000589 is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000590 @@ -6995,9 +6996,9 @@ namespace: zebrafish_anatomy def: "Region of the head where the mouth and oral structures are located." [GOC:ymb, ORCid:0000-0002-9900-7880] xref: TAO:0000590 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000591 @@ -7006,8 +7007,8 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become paraxial mesoderm. Determined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000591 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000021 ! gastrula:90%-epiboly +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000592 @@ -7018,9 +7019,9 @@ synonym: "adductor superficialis pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "superficial pelvic adductors" EXACT PLURAL [] xref: TAO:0000592 is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000593 @@ -7029,9 +7030,9 @@ namespace: zebrafish_anatomy comment: There may be a cholinergic nucleus called the superior reticular nucleus rostral to the locus coeruleus, ZDB-PUB-040526-6. xref: TAO:0000593 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000542 ! medial column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000594 @@ -7041,9 +7042,9 @@ def: "Dermal bone that articulates dorsally with the posttemporal and ventrally synonym: "supracleithra" EXACT PLURAL [] xref: TAO:0000594 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000595 @@ -7053,13 +7054,13 @@ def: "Large shield-shaped unpaired median cartilage bone that contact the pariet xref: TAO:0000595 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001506 ! tectum synoticum -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005609 ! supraoccipital-parietal joint relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000596 @@ -7076,9 +7077,9 @@ def: "CNS white matter that is part of the telencephalon." [GOC:mh, ORCiD:0000-0 synonym: "telencephalic tract/commissure" EXACT [] xref: TAO:0000597 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000598 @@ -7088,23 +7089,23 @@ def: "Male reproductive organ. Adult zebrafish testes are paired organs forming synonym: "testes" EXACT PLURAL [] xref: TAO:0000598 is_a: ZFA:0000413 ! gonad -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000242 ! male organism relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000599 name: torus semicircularis namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the midbrain and develops from the alar plate. The torus semicircularis is located dorsal to the lateral tegmentum where it extends into the medial tectal ventricle and receives ascending sensory octavolateralis input." [GOC:mh, ORCiD:0000-0001-9114-8737] -synonym: "semicircular torus " EXACT [] +synonym: "semicircular torus" EXACT [] xref: TAO:0000599 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000600 @@ -7116,9 +7117,9 @@ synonym: "trochlear" EXACT [] synonym: "trochlear nerve" EXACT [] xref: TAO:0000600 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000601 @@ -7129,10 +7130,10 @@ synonym: "periventricular pretectum" EXACT [] synonym: "pretectal periventricular nuclei" EXACT PLURAL [] xref: TAO:0000601 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon relationship: part_of ZFA:0000418 ! pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000602 @@ -7142,9 +7143,9 @@ def: "Neural arch that extends along the dorso-lateral surface of the last preur synonym: "uroneurals" EXACT PLURAL [] xref: TAO:0000602 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000603 @@ -7155,9 +7156,9 @@ synonym: "valvula" RELATED [] synonym: "valvula cerebellum" EXACT PLURAL [] xref: TAO:0000603 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000604 @@ -7166,8 +7167,8 @@ namespace: zebrafish_anatomy def: "Outflow artery from the heart to the aortic arches." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000604 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000605 @@ -7176,9 +7177,9 @@ namespace: zebrafish_anatomy synonym: "ventral funiculi" EXACT PLURAL [] xref: TAO:0000605 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000606 @@ -7187,8 +7188,8 @@ namespace: zebrafish_anatomy synonym: "ventral oblique branchial muscles" EXACT PLURAL [] xref: TAO:0000606 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000607 @@ -7197,19 +7198,19 @@ namespace: zebrafish_anatomy def: "Brainstem commissure that intersects the medial longitudinal fasciculus." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000607 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000608 name: ventral transverse namespace: zebrafish_anatomy synonym: "transverse ventralis" EXACT [] -synonym: "transversus ventralis " EXACT [] +synonym: "transversus ventralis" EXACT [] xref: TAO:0000608 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000609 @@ -7218,9 +7219,9 @@ namespace: zebrafish_anatomy def: "Midbrain nucleus which is part of the torus semicircularis and is the target of ascending octavolateralis systems related to mechanoreception. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000609 is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000599 ! torus semicircularis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000610 @@ -7230,8 +7231,8 @@ def: "Connective tissue partitions developing between the myotomes." [GOC:mh, OR synonym: "transverse myoseptum" EXACT [] xref: TAO:0000610 is_a: ZFA:0001089 ! myoseptum -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000611 @@ -7240,9 +7241,9 @@ namespace: zebrafish_anatomy def: "Collection of the visceromotor nuclei and their fiber tracts in the medulla oblongata." [ISBN:3540560130] xref: TAO:0000611 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000612 @@ -7254,8 +7255,8 @@ synonym: "protractor hyoideus" EXACT PLURAL [] synonym: "protractors hyoidei" EXACT PLURAL [] xref: TAO:0000612 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000614 @@ -7266,9 +7267,9 @@ synonym: "abductors profundus" EXACT PLURAL [] xref: TAO:0000614 is_a: ZFA:0005269 ! abductor muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000615 @@ -7278,8 +7279,8 @@ def: "Hyoid muscle that originates at the parasphenoid and inserts into the mesi synonym: "adductors arcus palatini" EXACT PLURAL [] xref: TAO:0000615 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000616 @@ -7290,9 +7291,9 @@ synonym: "adductors profundus" EXACT PLURAL [] xref: TAO:0000616 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000617 @@ -7303,9 +7304,9 @@ synonym: "anal erectors" EXACT PLURAL [] synonym: "erectores anales" EXACT [ZFIN:ZDB-PUB-171118-8] xref: TAO:0000617 is_a: ZFA:0005267 ! erector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000618 @@ -7317,8 +7318,8 @@ synonym: "commissura ansulata" EXACT [] synonym: "ventral tegmental commissure" EXACT [] xref: TAO:0000618 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000619 @@ -7335,9 +7336,9 @@ synonym: "rostral crista" EXACT [] xref: TAO:0000619 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000468 ! anterior crista primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000620 @@ -7348,12 +7349,12 @@ synonym: "palatine" EXACT [] xref: TAO:0000620 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005420 ! autopalatine-lateral ethmoid joint relationship: overlaps ZFA:0005421 ! autopalatine-maxillary joint relationship: overlaps ZFA:0005422 ! autopalatine-vomer joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000621 @@ -7364,11 +7365,11 @@ synonym: "quadrates" EXACT PLURAL [] xref: TAO:0000621 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005486 ! quadrate-metapterygoid joint relationship: overlaps ZFA:0005616 ! quadrate-entopterygoid joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000622 @@ -7379,10 +7380,10 @@ synonym: "barble" EXACT [] xref: TAO:0000622 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0005119 ! barbel primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0000623 @@ -7394,10 +7395,10 @@ synonym: "pelvic girdle" RELATED [] xref: TAO:0000623 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001539 ! basipterygium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005471 ! inter-basipterygium joint relationship: part_of ZFA:0000565 ! pelvic girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000624 @@ -7415,8 +7416,8 @@ def: "Brainstem and spinal tract which emerges medial to the caudal intermediate synonym: "tractus bulbospinalis" EXACT [] xref: TAO:0000626 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000627 @@ -7428,11 +7429,11 @@ synonym: "posterior ceratohyal" EXACT [] xref: TAO:0000627 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005497 ! epihyal-ceratohyal joint relationship: overlaps ZFA:0005498 ! epihyal-branchiostegal ray joint relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000628 @@ -7441,9 +7442,9 @@ namespace: zebrafish_anatomy def: "Fin musculature that is part of the caudal fin. The musculature is composed of 12 muscles that are arranged in a superficial and a deep muscle layer. Nerve roots of spinal segments 27-31 supply the caudal fin muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-011008-1] xref: TAO:0000628 is_a: ZFA:0000207 ! fin musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000629 @@ -7454,8 +7455,8 @@ synonym: "nucleus nervi abducentis, pars caudalis" EXACT [] synonym: "nVIc" EXACT [] xref: TAO:0000629 is_a: ZFA:0000713 ! abducens motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000630 @@ -7466,9 +7467,9 @@ synonym: "caudal parvocellular preoptic nuclei" EXACT PLURAL [] synonym: "posterior parvocellular preoptic nucleus" EXACT [] xref: TAO:0000630 is_a: ZFA:0001680 ! parvocellular preoptic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000631 @@ -7479,9 +7480,9 @@ synonym: "caudal pretectal nuclei" EXACT PLURAL [] synonym: "posterior pretectal nucleus" EXACT [] xref: TAO:0000631 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000687 ! superficial pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000632 @@ -7490,8 +7491,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that has as its parts the organs concerned with reproduction." [UBERON:curator] xref: TAO:0000632 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000633 @@ -7502,10 +7503,10 @@ synonym: "posterior tubercle" EXACT [] synonym: "posterior tuberculum" EXACT [] xref: TAO:0000633 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005909 ! presumptive preglomerular region relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000634 @@ -7515,9 +7516,9 @@ def: "Multi-tissue structure which forms most of the median tuberal portion of t synonym: "hypothalamus pars tuberalis " EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "tuberal hypothalamus" EXACT [ZFIN:ZDB-PUB-961014-1280] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000392 ! median tuberal portion -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000635 @@ -7527,9 +7528,9 @@ def: "Diencephalic nucleus that is part of the central pretectum and is dorsal t synonym: "nucleus praetectalis centralis" EXACT [] xref: TAO:0000635 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000636 @@ -7540,9 +7541,9 @@ comment: Not sure how much of the molecular layer is cerebellar crest. synonym: "crista cerebellaris molecular layer" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000636 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000291 ! medial octavolateralis nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000637 @@ -7551,9 +7552,9 @@ namespace: zebrafish_anatomy def: "Postcranial axial cartilage and Weberian ossicle that is located dorsal to the scaphium. The claustrum is bilaterally paired." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000637 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000638 @@ -7563,8 +7564,8 @@ def: "Anterior commissure which is located immediately ventral to the supracommi synonym: "commissura anterior, pars dorsalis" EXACT [] xref: TAO:0000638 is_a: ZFA:0001108 ! anterior commissure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000639 @@ -7575,9 +7576,9 @@ synonym: "commissura nucleorum gustatoriorum secundariorum" EXACT [] synonym: "commissure of the secondary gustatory nuclei" RELATED [] xref: TAO:0000639 is_a: ZFA:0001708 ! cerebellar white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000640 @@ -7588,9 +7589,9 @@ synonym: "corneas" EXACT PLURAL [] xref: TAO:0000640 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001688 ! corneal primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000641 @@ -7600,8 +7601,8 @@ def: "Twelve pairs of cranial nerves exit/enter the cranium through openings in synonym: "cranial nerves" EXACT PLURAL [] xref: TAO:0000641 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000642 @@ -7609,9 +7610,9 @@ name: decussation of the medial octavolateralis nucleus namespace: zebrafish_anatomy xref: TAO:0000642 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000381 ! lateral line sensory nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000643 @@ -7622,9 +7623,9 @@ synonym: "anterior cerebellar tract" EXACT [] synonym: "tractus cerebellaris anterior" EXACT [] xref: TAO:0000643 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000644 @@ -7642,8 +7643,8 @@ namespace: zebrafish_anatomy synonym: "nucleus octavus descendens" EXACT [] xref: TAO:0000645 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000646 @@ -7653,9 +7654,9 @@ def: "Rod-like internal median skeletal support bones of the anal fin, which art synonym: "anal fin distal radials" EXACT PLURAL [] xref: TAO:0000646 is_a: ZFA:0001646 ! anal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001420 ! anal fin pterygiophore -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000647 @@ -7666,9 +7667,9 @@ synonym: "dorsal posterior thalamic nucleus" EXACT [] synonym: "nucleus dorsalis posterior thalami" EXACT [] xref: TAO:0000647 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000653 ! dorsal thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000648 @@ -7677,9 +7678,9 @@ namespace: zebrafish_anatomy def: "Musculature that is part of the dorsal fin. The dorsal fin musculature is composed of one unit per fin ray that are arranged in series on each side of the body. Each unit is composed of one fin ray, three supporting pterygophores, and a set of paired depressor, erector, and inclinator muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] xref: TAO:0000648 is_a: ZFA:0000207 ! fin musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000649 @@ -7689,9 +7690,9 @@ synonym: "cornu dorsale" EXACT [] synonym: "dorsal horn" EXACT [] xref: TAO:0000649 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000650 @@ -7700,9 +7701,9 @@ namespace: zebrafish_anatomy synonym: "dorsal motor roots of V" EXACT PLURAL [] xref: TAO:0000650 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000651 @@ -7713,9 +7714,9 @@ synonym: "arrector dorsalis pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "dorsal pelvic arrectors" EXACT PLURAL [] xref: TAO:0000651 is_a: ZFA:0005275 ! arrector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000652 @@ -7725,9 +7726,9 @@ def: "The afferent sensory portion of the spinal nerve root." [http://en.wikiped synonym: "radix dorsalis" EXACT [] xref: TAO:0000652 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005578 ! spinal nerve root -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000653 @@ -7738,9 +7739,9 @@ synonym: "thalamus" RELATED [ZFIN:ZDB-PUB-100621-4] synonym: "thalamus, pars dorsalis" EXACT [] xref: TAO:0000653 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001215 ! thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000654 @@ -7749,8 +7750,8 @@ namespace: zebrafish_anatomy def: "Abducens motor nucleus which is located at the level of the superior reticular formation." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000654 is_a: ZFA:0000713 ! abducens motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000655 @@ -7759,9 +7760,9 @@ namespace: zebrafish_anatomy synonym: "tractus opticus dorsomedialis" EXACT [] xref: TAO:0000655 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000252 ! optic tract -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000656 @@ -7771,10 +7772,10 @@ def: "The ectopterygoid is dermal bone located at the anterior part of the palat synonym: "ectopterygoids" EXACT PLURAL [] xref: TAO:0000656 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000657 @@ -7785,11 +7786,11 @@ synonym: "endopterygoid" EXACT [] synonym: "mesopterygoid" EXACT [] xref: TAO:0000657 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005616 ! quadrate-entopterygoid joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000658 @@ -7800,9 +7801,9 @@ synonym: "epibranchial bones" EXACT PLURAL [] xref: TAO:0000658 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000660 @@ -7811,9 +7812,9 @@ namespace: zebrafish_anatomy def: "A free, modified neural spine of a preural or a ural vertebra that is placed between the last developed neural spine of a preural centrum and the dorsal axis (= anterior margin of first uroneural) of the caudal skeleton . An epural commonly supports one or more dorsal procurrent rays. An epural is an unpaired median perichondrally ossified bone." [TAO:curator] xref: TAO:0000660 is_a: ZFA:0001336 ! neural spine -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000661 @@ -7825,12 +7826,12 @@ xref: TAO:0000661 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: develops_from ZFA:0001504 ! occipital arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005423 ! basioccipital-exoccipital joint relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000662 @@ -7839,8 +7840,8 @@ namespace: zebrafish_anatomy synonym: "external pharyngoclavicularae" EXACT PLURAL [] xref: TAO:0000662 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000663 @@ -7852,9 +7853,9 @@ synonym: "supratemporal" EXACT [] synonym: "tabular" EXACT [] xref: TAO:0000663 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000664 @@ -7866,9 +7867,9 @@ synonym: "facial nerve" EXACT [] synonym: "nervus facialis" EXACT [] xref: TAO:0000664 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000665 @@ -7876,10 +7877,10 @@ name: rostral root of abducens nerve namespace: zebrafish_anatomy xref: TAO:0000665 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000310 ! cranial nerve VI relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000666 @@ -7889,10 +7890,10 @@ def: "Artery of the gill filament." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "filamental arteries" EXACT PLURAL [] xref: TAO:0000666 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000667 ! gill filament relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000667 @@ -7902,9 +7903,9 @@ def: "Portion of tissue that projects outward from the gill and is a thread-like synonym: "gill filaments" EXACT PLURAL [] xref: TAO:0000667 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000668 @@ -7916,9 +7917,9 @@ synonym: "glossopharyngeal nerve" EXACT [] synonym: "nervus glossopharyngeus" EXACT [] xref: TAO:0000668 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000669 @@ -7929,11 +7930,11 @@ synonym: "anterior kidney" EXACT [] synonym: "kidney marrow" EXACT [] xref: TAO:0000669 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000670 @@ -7943,9 +7944,9 @@ def: "Vein that carries blood away from the liver." [GOC:cvs, ORCiD:0000-0002-22 synonym: "hepatic veins" EXACT PLURAL [] xref: TAO:0000670 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000671 @@ -7955,8 +7956,8 @@ def: "A connective tissue partition developing at the apex of the chevron-shaped synonym: "horizontal septum" EXACT [] xref: TAO:0000671 is_a: ZFA:0001089 ! myoseptum -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000672 @@ -7967,11 +7968,11 @@ synonym: "hyomandibular" EXACT [] xref: TAO:0000672 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005469 ! hyomandibula-metapterygoid joint relationship: overlaps ZFA:0005632 ! preopercle vertical limb-hyomandibula joint relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000673 @@ -7982,8 +7983,8 @@ synonym: "HA" EXACT [] xref: TAO:0000673 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000674 @@ -7993,11 +7994,11 @@ def: "Dermal bone that is located anterior to the subopercle and lying below and synonym: "interopercles" EXACT PLURAL [] xref: TAO:0000674 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000676 @@ -8010,9 +8011,9 @@ synonym: "saccular otolith" EXACT [] synonym: "sacculith" EXACT [] xref: TAO:0000676 is_a: ZFA:0001617 ! otolith -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000428 ! saccule -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000677 @@ -8021,8 +8022,8 @@ namespace: zebrafish_anatomy synonym: "segmental intercostal arteries" EXACT PLURAL [] xref: TAO:0000677 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000678 @@ -8034,9 +8035,9 @@ synonym: "sensory hair cells anterior macula" EXACT PLURAL [] xref: TAO:0000678 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001098 ! immature hair cell anterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000168 ! anterior macula -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000679 @@ -8045,9 +8046,9 @@ namespace: zebrafish_anatomy synonym: "sensory roots of facial nerves" EXACT PLURAL [] xref: TAO:0000679 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000680 @@ -8058,10 +8059,10 @@ synonym: "sinoatrial valves" EXACT PLURAL [] xref: TAO:0000680 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000154 ! sinus venosus relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000681 @@ -8072,9 +8073,9 @@ synonym: "neural postzygapophyses" EXACT PLURAL [] synonym: "neural postzygopophysis" EXACT [] xref: TAO:0000681 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000682 @@ -8083,8 +8084,8 @@ namespace: zebrafish_anatomy synonym: "spinal arteries" EXACT PLURAL [] xref: TAO:0000682 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000683 @@ -8094,9 +8095,9 @@ def: "Diencephalic nucleus that is part of the synencephalon, is located adjacen synonym: "SCO" EXACT [] xref: TAO:0000683 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000684 @@ -8105,9 +8106,9 @@ namespace: zebrafish_anatomy def: "CNS white matter (commissure) that runs between the optic tectal hemispheres." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000684 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000685 @@ -8119,9 +8120,9 @@ synonym: "superficial abductors" EXACT PLURAL [] xref: TAO:0000685 is_a: ZFA:0005269 ! abductor muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000686 @@ -8131,9 +8132,9 @@ synonym: "superficial gray and white zone" EXACT [] synonym: "superficial grey and white zones" EXACT PLURAL [] xref: TAO:0000686 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000687 @@ -8143,9 +8144,9 @@ def: "Multi-tissue structure that is the superficial part of the pretectum and i xref: TAO:0000687 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005908 ! presumptive pretectum proliferative zone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000418 ! pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000688 @@ -8157,9 +8158,9 @@ subset: cell_slim synonym: "support cells" RELATED PLURAL [] xref: TAO:0000688 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0000689 @@ -8170,8 +8171,8 @@ synonym: "area ventralis telencephali, nucleus supracommissuralis" EXACT [] synonym: "supracommissural nucleus of V" EXACT [] xref: TAO:0000689 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000690 @@ -8179,8 +8180,8 @@ name: supraoptic commissure namespace: zebrafish_anatomy xref: TAO:0000690 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000691 @@ -8190,10 +8191,10 @@ def: "Paired dermal bones that form the anterodorsal margin of the orbit." [GOC: synonym: "supraorbital bones" EXACT PLURAL [] xref: TAO:0000691 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000692 @@ -8204,10 +8205,10 @@ synonym: "symplectics" EXACT PLURAL [] xref: TAO:0000692 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005631 ! preopercle horizontal limb-symplectic joint relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000693 @@ -8216,8 +8217,8 @@ namespace: zebrafish_anatomy def: "The tangential nucleus is located in rhombomere 5 and receives a dense utricular input. Tangential nucleus neurons project contralaterally to extraocular motoneurons and to multiple sites within the reticulospinal complex; unlike other classes of vestibular neuron, they modulate their firing in response to static head displacements." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120702-13, ZFIN:ZDB-PUB-160324-18] xref: TAO:0000693 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000694 @@ -8230,10 +8231,10 @@ synonym: "tooth" EXACT [] xref: TAO:0000694 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005138 ! dental organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001239 ! ceratobranchial 5 bone -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000695 @@ -8243,9 +8244,9 @@ def: "The anatomical space located between the lips and the oral valves." [GOC:m synonym: "labial cavities" EXACT PLURAL [] xref: TAO:0000695 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000696 @@ -8257,9 +8258,9 @@ synonym: "ventriculi telencephali " EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000696 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001259 ! forebrain ventricle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000697 @@ -8271,8 +8272,8 @@ synonym: "CN-V" EXACT [] synonym: "trigeminal nerve" EXACT [] xref: TAO:0000697 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000698 @@ -8282,10 +8283,10 @@ def: "The fourth Weberian ossicle. The tripus is a complex modification of the p xref: TAO:0000698 is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001169 ! vertebra 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000699 @@ -8302,10 +8303,10 @@ def: "Otolith organ comprised of the macula utricle and lapillus. The lagena is synonym: "utriculus" EXACT [] xref: TAO:0000700 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005409 ! pars superior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000701 @@ -8318,9 +8319,9 @@ synonym: "ventral arrectors" EXACT PLURAL [] xref: TAO:0000701 is_a: ZFA:0005275 ! arrector muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000702 @@ -8329,9 +8330,9 @@ namespace: zebrafish_anatomy synonym: "ventral horns spinal cord" EXACT PLURAL [] xref: TAO:0000702 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000703 @@ -8340,8 +8341,8 @@ namespace: zebrafish_anatomy def: "Trigeminal motor nucleus that is located at the ventrolateral edge of the lateral longitudinal fascicle." [ISBN:3764351209] xref: TAO:0000703 is_a: ZFA:0001365 ! trigeminal motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000704 @@ -8351,9 +8352,9 @@ def: "Deep, narrow muscle that arises anteriorly and laterally of the pelvic abd synonym: "ventral pelvic arrectors" EXACT PLURAL [] xref: TAO:0000704 is_a: ZFA:0005275 ! arrector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000705 @@ -8363,9 +8364,9 @@ def: "The efferent motor portion of the spinal nerve root." [http://en.wikipedia synonym: "ventral roots" EXACT PLURAL [] xref: TAO:0000705 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005578 ! spinal nerve root -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000706 @@ -8375,9 +8376,9 @@ def: "The posterior intestine has short longitudinally arranged epithelial folds xref: TAO:0000706 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000707 @@ -8386,9 +8387,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure which is the ventral region of the median tuberal portion of the hypothalamus and is the most rostral region of the hypothalamus. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000707 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000392 ! median tuberal portion -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000708 @@ -8397,9 +8398,9 @@ namespace: zebrafish_anatomy synonym: "ventrolateral optic tracts" EXACT PLURAL [] xref: TAO:0000708 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000252 ! optic tract -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000709 @@ -8408,8 +8409,8 @@ namespace: zebrafish_anatomy synonym: "vestibulo-spinal tracts" EXACT PLURAL [] xref: TAO:0000709 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000710 @@ -8419,9 +8420,9 @@ synonym: "commissural nucleus of Cajal" EXACT [] synonym: "nucleus commissuralis Cajal" EXACT [] xref: TAO:0000710 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000711 @@ -8433,9 +8434,9 @@ synonym: "DEL cells" EXACT PLURAL [] xref: TAO:0000711 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001473 ! deep blastomere -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000712 @@ -8445,9 +8446,9 @@ def: "The portion of the YSL that lies deep to the blastoderm during epiboly." [ synonym: "I-YSL" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000712 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000013 ! Blastula:Oblong +relationship: start ZFS:0000013 ! blastula:oblong [Term] id: ZFA:0000713 @@ -8460,9 +8461,9 @@ synonym: "motor nucleus VI" EXACT [] synonym: "nVI" EXACT [] xref: TAO:0000713 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000714 @@ -8473,9 +8474,9 @@ synonym: "APN" EXACT [] synonym: "nucleus praetectalis accessorius" EXACT [] xref: TAO:0000714 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000715 @@ -8486,9 +8487,9 @@ synonym: "adductors hyohyoid" EXACT PLURAL [] synonym: "hyohyoidei adductores" EXACT [] xref: TAO:0000715 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007052 ! hyohyoideus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000716 @@ -8498,10 +8499,10 @@ def: "Artery that is part of the pharyngeal arches 3-5, and forms the afferent p synonym: "ABA" EXACT [] xref: TAO:0000716 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000717 @@ -8510,9 +8511,9 @@ namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000717 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000718 @@ -8521,9 +8522,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 27 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000718 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000719 @@ -8534,9 +8535,9 @@ subset: cell_slim synonym: "slow muscle cells somite 21" EXACT PLURAL [] xref: TAO:0000719 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000720 @@ -8547,9 +8548,9 @@ subset: cell_slim synonym: "slow muscle cells somite 24" EXACT PLURAL [] xref: TAO:0000720 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000721 @@ -8560,9 +8561,9 @@ subset: cell_slim synonym: "slow muscle cells somite 27" EXACT PLURAL [] xref: TAO:0000721 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000722 @@ -8573,9 +8574,9 @@ subset: cell_slim synonym: "slow muscle cells somite 3" EXACT PLURAL [] xref: TAO:0000722 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000723 @@ -8586,9 +8587,9 @@ subset: cell_slim synonym: "slow muscle cells somite 5" EXACT PLURAL [] xref: TAO:0000723 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000724 @@ -8599,9 +8600,9 @@ subset: cell_slim synonym: "slow muscle cells somite 8" EXACT PLURAL [] xref: TAO:0000724 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000725 @@ -8610,8 +8611,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 11 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000725 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000726 @@ -8620,8 +8621,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 14 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000726 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000727 @@ -8630,8 +8631,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 17 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000727 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000728 @@ -8640,8 +8641,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 2 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000728 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000729 @@ -8650,9 +8651,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 3 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000729 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000730 @@ -8661,8 +8662,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 23 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000730 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000731 @@ -8671,8 +8672,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 27 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000731 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000732 @@ -8681,8 +8682,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 3 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000732 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000733 @@ -8691,8 +8692,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 7 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000733 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000734 @@ -8703,9 +8704,9 @@ synonym: "caudal fin vertebra" EXACT [] synonym: "specialized centra/vertebrae" EXACT PLURAL [] xref: TAO:0000734 is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000735 @@ -8717,9 +8718,9 @@ synonym: "hemal postzygapophyses" EXACT PLURAL [] synonym: "hemal postzygopophysis" EXACT [] xref: TAO:0000735 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000519 ! hemal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000737 @@ -8729,9 +8730,9 @@ def: "Skeletal system that is part of the head, including the splanchnocranium, synonym: "cranial skeleton" EXACT [] xref: TAO:0000737 is_a: ZFA:0000434 ! skeletal system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000738 @@ -8743,9 +8744,9 @@ synonym: "dorsal oblique extraocular muscles" EXACT PLURAL [] synonym: "superior oblique muscle" EXACT [ZFIN:ZDB-PUB-110512-18] xref: TAO:0000738 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000739 @@ -8754,9 +8755,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 11 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000739 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000740 @@ -8765,9 +8766,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 5 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000740 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000741 @@ -8776,9 +8777,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 14 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000741 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000742 @@ -8787,9 +8788,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 17 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000742 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000743 @@ -8798,9 +8799,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 2 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000743 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000744 @@ -8809,9 +8810,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 22 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000744 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000745 @@ -8820,9 +8821,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 25 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000745 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000746 @@ -8831,9 +8832,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 28 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000746 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000747 @@ -8842,9 +8843,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 30 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000747 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000748 @@ -8853,9 +8854,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 6 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000748 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000749 @@ -8864,9 +8865,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 9 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000749 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000750 @@ -8878,9 +8879,9 @@ synonym: "fast muscle cells somite 10" EXACT PLURAL [] synonym: "fast muscle fiber somite 10" EXACT [] xref: TAO:0000750 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000751 @@ -8889,9 +8890,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 8 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000751 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000752 @@ -8903,9 +8904,9 @@ synonym: "fast muscle cells somite 13" EXACT PLURAL [] synonym: "fast muscle fiber somite 13" EXACT [] xref: TAO:0000752 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000753 @@ -8917,9 +8918,9 @@ synonym: "fast muscle cells somite 16" EXACT PLURAL [] synonym: "fast muscle fiber somite 16" EXACT [] xref: TAO:0000753 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000754 @@ -8931,9 +8932,9 @@ synonym: "fast muscle cells somite 19" EXACT PLURAL [] synonym: "fast muscle fiber somite 19" EXACT [] xref: TAO:0000754 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000755 @@ -8945,9 +8946,9 @@ synonym: "fast muscle cells somite 21" EXACT PLURAL [] synonym: "fast muscle fiber somite 21" EXACT [] xref: TAO:0000755 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000756 @@ -8959,9 +8960,9 @@ synonym: "fast muscle cells somite 24" EXACT PLURAL [] synonym: "fast muscle fiber somite 24" EXACT [] xref: TAO:0000756 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000757 @@ -8973,9 +8974,9 @@ synonym: "fast muscle cells somite 27" EXACT PLURAL [] synonym: "fast muscle fiber somite 27" EXACT [] xref: TAO:0000757 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000758 @@ -8987,9 +8988,9 @@ synonym: "fast muscle cells somite 3" EXACT PLURAL [] synonym: "fast muscle fiber somite 3" EXACT [] xref: TAO:0000758 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000759 @@ -9001,9 +9002,9 @@ synonym: "fast muscle cells somite 5" EXACT PLURAL [] synonym: "fast muscle fiber somite 5" EXACT [] xref: TAO:0000759 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000760 @@ -9015,9 +9016,9 @@ synonym: "fast muscle cells somite 8" EXACT PLURAL [] synonym: "fast muscle fiber somite 8" EXACT [] xref: TAO:0000760 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000761 @@ -9028,9 +9029,9 @@ synonym: "floor plate midbrain" RELATED [] synonym: "floorplate midbrain" RELATED [] xref: TAO:0000761 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000762 @@ -9040,8 +9041,8 @@ def: "Cranial neural crest that gives rise to the facio-acoustic ganglion." [GOC synonym: "facio acoustic neural crest" EXACT [] xref: TAO:0000762 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000763 @@ -9052,10 +9053,10 @@ synonym: "floor plate r2" EXACT [] synonym: "floorplate r2" EXACT [] xref: TAO:0000763 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000764 @@ -9066,10 +9067,10 @@ synonym: "floor plate r5" EXACT [] synonym: "floorplate r5" EXACT [] xref: TAO:0000764 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000765 @@ -9080,10 +9081,10 @@ synonym: "floor plate r8" EXACT [] synonym: "floorplate r8" EXACT [] xref: TAO:0000765 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000766 @@ -9092,9 +9093,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is part of the valvula cerebelli and consists largely of axons and dendrites." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000766 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000767 @@ -9103,9 +9104,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 11 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000767 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000768 @@ -9114,9 +9115,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 14 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000768 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000769 @@ -9125,9 +9126,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 17 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000769 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000770 @@ -9136,9 +9137,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 2 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000770 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000771 @@ -9147,9 +9148,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 22 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000771 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000772 @@ -9158,9 +9159,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 25 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000772 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000773 @@ -9172,9 +9173,9 @@ synonym: "fast muscle cells somite 12" EXACT PLURAL [] synonym: "fast muscle fiber somite 12" EXACT [] xref: TAO:0000773 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000774 @@ -9184,9 +9185,9 @@ def: "The hypaxial region of somite 28 derived body wall muscle. The hypaxial re subset: cell_slim xref: TAO:0000774 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000775 @@ -9196,9 +9197,9 @@ def: "The hypaxial region of somite 30 derived body wall muscle. The hypaxial re subset: cell_slim xref: TAO:0000775 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000776 @@ -9207,9 +9208,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 6 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000776 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000777 @@ -9218,9 +9219,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 9 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000777 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000778 @@ -9232,9 +9233,9 @@ synonym: "interneurons spinal cord" EXACT PLURAL [] xref: CL:0005000 xref: TAO:0000778 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000779 @@ -9244,9 +9245,9 @@ def: "Portion of the lateral forebrain bundle that lies in the telencephalon." [ synonym: "lateral forebrain bundles telencephalon" EXACT PLURAL [] xref: TAO:0000779 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007012 ! lateral forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000780 @@ -9256,9 +9257,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the diencephalic synonym: "lateral wall diencephalon" EXACT [] xref: TAO:0000780 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000781 @@ -9267,9 +9268,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 1." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000781 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000782 @@ -9278,9 +9279,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000782 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000783 @@ -9289,9 +9290,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000783 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000949 ! rhombomere 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000784 @@ -9303,9 +9304,9 @@ synonym: "fast muscle cells somite 15" EXACT PLURAL [] synonym: "fast muscle fiber somite 15" EXACT [] xref: TAO:0000784 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000785 @@ -9315,9 +9316,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the telencephalic synonym: "lateral wall telencephalon" EXACT [] xref: TAO:0000785 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000786 @@ -9325,9 +9326,9 @@ name: medial migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000786 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000787 @@ -9335,8 +9336,8 @@ name: mesenchyme derived from head neural crest namespace: zebrafish_anatomy xref: TAO:0000787 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000788 @@ -9345,9 +9346,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme part of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000788 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000789 @@ -9357,9 +9358,9 @@ def: "Mesoderm that is part of the pectoral fin bud." [GOC:mh, ORCiD:0000-0001-9 synonym: "mesoderm pectoral fin buds" EXACT PLURAL [] xref: TAO:0000789 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000790 @@ -9370,9 +9371,9 @@ subset: cell_slim synonym: "muscle pioneers somite 10" EXACT PLURAL [] xref: TAO:0000790 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000791 @@ -9383,9 +9384,9 @@ subset: cell_slim synonym: "muscle pioneers somite 13" EXACT PLURAL [] xref: TAO:0000791 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000792 @@ -9396,9 +9397,9 @@ subset: cell_slim synonym: "muscle pioneers somite 16" EXACT PLURAL [] xref: TAO:0000792 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000793 @@ -9409,9 +9410,9 @@ subset: cell_slim synonym: "muscle pioneers somite 19" EXACT PLURAL [] xref: TAO:0000793 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000794 @@ -9422,9 +9423,9 @@ subset: cell_slim synonym: "muscle pioneers somite 22" EXACT PLURAL [] xref: TAO:0000794 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000795 @@ -9436,9 +9437,9 @@ synonym: "fast muscle cells somite 18" EXACT PLURAL [] synonym: "fast muscle fiber somite 18" EXACT [] xref: TAO:0000795 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000796 @@ -9449,9 +9450,9 @@ subset: cell_slim synonym: "muscle pioneers somite 25" EXACT PLURAL [] xref: TAO:0000796 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000797 @@ -9462,9 +9463,9 @@ subset: cell_slim synonym: "muscle pioneers somite 28" EXACT PLURAL [] xref: TAO:0000797 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000798 @@ -9475,9 +9476,9 @@ subset: cell_slim synonym: "muscle pioneers somite 30" EXACT PLURAL [] xref: TAO:0000798 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000799 @@ -9488,9 +9489,9 @@ subset: cell_slim synonym: "muscle pioneers somite 6" EXACT PLURAL [] xref: TAO:0000799 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000800 @@ -9501,9 +9502,9 @@ subset: cell_slim synonym: "muscle pioneers somite 9" EXACT PLURAL [] xref: TAO:0000800 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000801 @@ -9513,9 +9514,9 @@ def: "Portion of somite 11 that gives rise to body wall muscle masses." [ZFIN:ZD subset: cell_slim xref: TAO:0000801 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000802 @@ -9525,9 +9526,9 @@ def: "Portion of somite 15 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000802 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000803 @@ -9537,9 +9538,9 @@ def: "Portion of somite 18 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000803 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000804 @@ -9549,9 +9550,9 @@ def: "Portion of somite 20 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000804 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000805 @@ -9561,9 +9562,9 @@ def: "Portion of somite 23 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000805 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000806 @@ -9575,21 +9576,21 @@ synonym: "fast muscle cells somite 20" EXACT PLURAL [] synonym: "fast muscle fiber somite 20" EXACT [] xref: TAO:0000806 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000807 name: myotome somite 26 namespace: zebrafish_anatomy -def: "Portion of somite 16 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] +def: "Portion of somite 26 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] subset: cell_slim xref: TAO:0000807 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000808 @@ -9599,9 +9600,9 @@ def: "Portion of somite 29 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000808 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000809 @@ -9611,9 +9612,9 @@ def: "Portion of somite 4 that gives rise to body wall muscle masses." [GOC:ymb, subset: cell_slim xref: TAO:0000809 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000810 @@ -9623,9 +9624,9 @@ def: "Portion of somite 7 that gives rise to body wall muscle masses." [GOC:ymb, subset: cell_slim xref: TAO:0000810 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000811 @@ -9635,8 +9636,8 @@ def: "Cranial neural crest that is part of the diencephalon." [GOC:ymb, ORCiD:00 synonym: "diencephalic neural crest" EXACT [] xref: TAO:0000811 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000812 @@ -9645,8 +9646,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that is part of the telencephalon." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0000812 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000813 @@ -9657,9 +9658,9 @@ synonym: "neuromast infraorbital" EXACT [] synonym: "neuromasts infraorbital" EXACT PLURAL [] xref: TAO:0000813 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000524 ! infraorbital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000814 @@ -9670,9 +9671,9 @@ synonym: "neuromast opercular" EXACT [] synonym: "neuromasts opercular" EXACT PLURAL [] xref: TAO:0000814 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000424 ! opercular lateral line -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000815 @@ -9680,9 +9681,9 @@ name: nucleus of the medial longitudinal fasciculus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000815 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000816 @@ -9691,9 +9692,9 @@ namespace: zebrafish_anatomy def: "The epithelium that lines the oral cavity. The oral epithelium epithelial cells with many short microvilli as well as mucous cells, rodlet cells and taste buds." [ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24] xref: TAO:0000816 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000817 @@ -9705,9 +9706,9 @@ synonym: "fast muscle cells somite 23" EXACT PLURAL [] synonym: "fast muscle fiber somite 23" EXACT [] xref: TAO:0000817 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000818 @@ -9717,8 +9718,8 @@ def: "Vagal neural crest is adjacent to the first seven somites gives rise to bo synonym: "post-otic neural crest" EXACT [] xref: TAO:0000818 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000819 @@ -9729,8 +9730,8 @@ synonym: "area ventralis telencephali, nucleus postcommissuralis" EXACT [] synonym: "postcommissural nucleus of V" EXACT [] xref: TAO:0000819 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000820 @@ -9749,8 +9750,8 @@ subset: cell_slim synonym: "primary neurons hindbrain" EXACT PLURAL [] xref: TAO:0000821 is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000822 @@ -9761,8 +9762,8 @@ synonym: "r2" EXACT [] xref: TAO:0000822 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001208 ! presumptive rhombomere 2 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000823 @@ -9773,8 +9774,8 @@ synonym: "r5" EXACT [] xref: TAO:0000823 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001211 ! presumptive rhombomere 5 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000824 @@ -9783,10 +9784,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 2." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000824 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000825 @@ -9795,10 +9796,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000825 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000826 @@ -9809,9 +9810,9 @@ synonym: "central nucleus of semicircular torus" EXACT [] synonym: "nucleus centralis tori semicircularis" EXACT [] xref: TAO:0000826 is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000599 ! torus semicircularis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000827 @@ -9823,9 +9824,9 @@ synonym: "fast muscle cells somite 26" EXACT PLURAL [] synonym: "fast muscle fiber somite 26" EXACT [] xref: TAO:0000827 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000828 @@ -9834,10 +9835,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000828 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000829 @@ -9846,9 +9847,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 11 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000829 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000830 @@ -9857,9 +9858,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 14 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000830 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000831 @@ -9868,9 +9869,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 17 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000831 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000832 @@ -9879,9 +9880,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 2 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000832 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000833 @@ -9890,9 +9891,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 22 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000833 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000834 @@ -9901,9 +9902,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 25 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000834 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000835 @@ -9912,9 +9913,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 28 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000835 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000836 @@ -9923,9 +9924,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 30 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000836 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000837 @@ -9934,9 +9935,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 6 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000837 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000838 @@ -9948,9 +9949,9 @@ synonym: "fast muscle cells somite 29" EXACT PLURAL [] synonym: "fast muscle fiber somite 29" EXACT [] xref: TAO:0000838 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000839 @@ -9959,9 +9960,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 9 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000839 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000840 @@ -9972,9 +9973,9 @@ subset: cell_slim synonym: "slow muscle cells somite 11" EXACT PLURAL [] xref: TAO:0000840 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000841 @@ -9985,9 +9986,9 @@ subset: cell_slim synonym: "slow muscle cells somite 14" EXACT PLURAL [] xref: TAO:0000841 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000842 @@ -9998,9 +9999,9 @@ subset: cell_slim synonym: "slow muscle cells somite 17" EXACT PLURAL [] xref: TAO:0000842 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000843 @@ -10011,9 +10012,9 @@ subset: cell_slim synonym: "slow muscle cells somite 2" EXACT PLURAL [] xref: TAO:0000843 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000844 @@ -10024,9 +10025,9 @@ subset: cell_slim synonym: "slow muscle cells somite 22" EXACT PLURAL [] xref: TAO:0000844 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000845 @@ -10037,9 +10038,9 @@ subset: cell_slim synonym: "slow muscle cells somite 25" EXACT PLURAL [] xref: TAO:0000845 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000846 @@ -10050,9 +10051,9 @@ subset: cell_slim synonym: "slow muscle cells somite 28" EXACT PLURAL [] xref: TAO:0000846 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000847 @@ -10063,9 +10064,9 @@ subset: cell_slim synonym: "slow muscle cells somite 30" EXACT PLURAL [] xref: TAO:0000847 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000848 @@ -10076,9 +10077,9 @@ subset: cell_slim synonym: "slow muscle cells somite 6" EXACT PLURAL [] xref: TAO:0000848 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000849 @@ -10090,9 +10091,9 @@ synonym: "fast muscle cells somite 4" EXACT PLURAL [] synonym: "fast muscle fiber somite 4" EXACT [] xref: TAO:0000849 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000850 @@ -10103,9 +10104,9 @@ subset: cell_slim synonym: "slow muscle cells somite 9" EXACT PLURAL [] xref: TAO:0000850 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000851 @@ -10114,8 +10115,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 12 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000851 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000852 @@ -10124,8 +10125,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 15 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000852 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000853 @@ -10134,8 +10135,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 18 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000853 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000854 @@ -10144,8 +10145,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail 21 segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000854 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000855 @@ -10154,8 +10155,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 24 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000855 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000856 @@ -10164,8 +10165,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 28 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000856 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000857 @@ -10174,8 +10175,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 4 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000857 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000858 @@ -10184,8 +10185,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 8 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000858 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000859 @@ -10198,9 +10199,9 @@ synonym: "specialized haemal arch and spine" EXACT [] synonym: "specialized hemal arches and spines" EXACT PLURAL [] xref: TAO:0000859 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000860 @@ -10212,9 +10213,9 @@ synonym: "fast muscle cells somite 7" EXACT PLURAL [] synonym: "fast muscle fiber somite 7" EXACT [] xref: TAO:0000860 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000861 @@ -10226,9 +10227,9 @@ synonym: "inferior oblique muscle" EXACT [ZFIN:ZDB-PUB-110512-18] synonym: "ventral oblique extraocular muscles" EXACT PLURAL [] xref: TAO:0000861 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000862 @@ -10237,9 +10238,9 @@ namespace: zebrafish_anatomy def: "Median fin skeleton supporting the caudal fin." [TAO:curator] xref: TAO:0000862 is_a: ZFA:0001123 ! axial fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000863 @@ -10249,9 +10250,9 @@ def: "Anatomical cluster that is part of the cranium and composed of dermally de synonym: "dermal bone cranium" EXACT [] xref: TAO:0000863 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000864 @@ -10260,9 +10261,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 1 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000864 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000865 @@ -10271,9 +10272,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 12 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000865 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000866 @@ -10282,9 +10283,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 15 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000866 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000867 @@ -10293,9 +10294,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 18 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000867 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000868 @@ -10304,9 +10305,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 20 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000868 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000869 @@ -10315,9 +10316,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 23 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000869 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000870 @@ -10326,9 +10327,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 26 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000870 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000871 @@ -10338,10 +10339,10 @@ def: "Floor plate that is part of the diencephalon." [GOC:mh, ORCiD:0000-0001-91 synonym: "floorplate diencephalon" EXACT [] xref: TAO:0000871 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000872 @@ -10350,9 +10351,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 29 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000872 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000873 @@ -10361,9 +10362,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 4 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000873 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000874 @@ -10372,9 +10373,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 7 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000874 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000875 @@ -10395,9 +10396,9 @@ synonym: "fast muscle cells somite 11" EXACT PLURAL [] synonym: "fast muscle fiber somite 11" EXACT [] xref: TAO:0000876 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000877 @@ -10409,9 +10410,9 @@ synonym: "fast muscle cells somite 14" EXACT PLURAL [] synonym: "fast muscle fiber somite 14" EXACT [] xref: TAO:0000877 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000878 @@ -10423,9 +10424,9 @@ synonym: "fast muscle cells somite 17" EXACT PLURAL [] synonym: "fast muscle fiber somite 17" EXACT [] xref: TAO:0000878 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000879 @@ -10437,9 +10438,9 @@ synonym: "fast muscle cells somite 2" EXACT PLURAL [] synonym: "fast muscle fiber somite 2" EXACT [] xref: TAO:0000879 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000880 @@ -10451,9 +10452,9 @@ synonym: "fast muscle cells somite 22" EXACT PLURAL [] synonym: "fast muscle fiber somite 22" EXACT [] xref: TAO:0000880 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000881 @@ -10465,9 +10466,9 @@ synonym: "fast muscle cells somite 25" EXACT PLURAL [] synonym: "fast muscle fiber somite 25" EXACT [] xref: TAO:0000881 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000882 @@ -10477,10 +10478,10 @@ def: "Floor plate that is part of the rhombomere 1." [GOC:mh, ORCiD:0000-0001-91 synonym: "floor plate r1" EXACT [] xref: TAO:0000882 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000883 @@ -10492,9 +10493,9 @@ synonym: "fast muscle cells somite 28" EXACT PLURAL [] synonym: "fast muscle fiber somite 28" EXACT [] xref: TAO:0000883 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000884 @@ -10506,9 +10507,9 @@ synonym: "fast muscle cells somite 30" EXACT PLURAL [] synonym: "fast muscle fiber somite 30" EXACT [] xref: TAO:0000884 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000885 @@ -10520,9 +10521,9 @@ synonym: "fast muscle cells somite 6" EXACT PLURAL [] synonym: "fast muscle fiber somite 6" EXACT [] xref: TAO:0000885 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000886 @@ -10534,9 +10535,9 @@ synonym: "fast muscle cells somite 9" EXACT PLURAL [] synonym: "fast muscle fiber somite 9" EXACT [] xref: TAO:0000886 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000887 @@ -10546,10 +10547,10 @@ def: "Floor plate that is part of the neural rod." [GOC:mh, GOC:ymb, ORCiD:0000- synonym: "floorplate neural rod" EXACT [] xref: TAO:0000887 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000888 @@ -10560,10 +10561,10 @@ synonym: "floor plate r3" EXACT [] synonym: "floorplate r3" EXACT [] xref: TAO:0000888 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000889 @@ -10574,10 +10575,10 @@ synonym: "floor plate r6" EXACT [] synonym: "floorplate r6" EXACT [] xref: TAO:0000889 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000890 @@ -10588,10 +10589,10 @@ synonym: "floorplate spinal cord" EXACT [] xref: TAO:0000890 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001434 ! floor plate neural tube -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000891 @@ -10600,9 +10601,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 1 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000891 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000892 @@ -10611,9 +10612,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 12 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000892 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000893 @@ -10624,10 +10625,10 @@ synonym: "floor plate r4" EXACT [] synonym: "floorplate r4" EXACT [] xref: TAO:0000893 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000894 @@ -10636,9 +10637,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 15 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000894 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000895 @@ -10647,9 +10648,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 18 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000895 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000896 @@ -10658,9 +10659,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 20 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000896 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000897 @@ -10669,9 +10670,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 23 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000897 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000898 @@ -10680,9 +10681,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 26 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000898 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000899 @@ -10691,9 +10692,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 29 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000899 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000900 @@ -10702,9 +10703,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 4 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000900 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000901 @@ -10713,9 +10714,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 7 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000901 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000902 @@ -10725,9 +10726,9 @@ def: "Musculature associated with the hypurals." [GOC:cvs, ORCiD:0000-0002-2244- synonym: "hypural muscles" EXACT PLURAL [] xref: TAO:0000902 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000628 ! caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000903 @@ -10736,9 +10737,9 @@ namespace: zebrafish_anatomy comment: ZDB-PUB-010601-11 says there are 4 sub-nuclei. xref: TAO:0000903 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000904 @@ -10749,10 +10750,10 @@ synonym: "floor plate r7" EXACT [] synonym: "floorplate r7" EXACT [] xref: TAO:0000904 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000905 @@ -10760,8 +10761,8 @@ name: lateral mesenchyme derived from mesoderm namespace: zebrafish_anatomy xref: TAO:0000905 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000906 @@ -10771,9 +10772,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the midbrain regi synonym: "lateral wall midbrain" EXACT [] xref: TAO:0000906 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000907 @@ -10782,9 +10783,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 2." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000907 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000908 @@ -10793,9 +10794,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000908 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000909 @@ -10804,9 +10805,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000909 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000153 ! rhombomere 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000910 @@ -10815,9 +10816,9 @@ namespace: zebrafish_anatomy synonym: "medial forebrain bundles telencephalon" EXACT PLURAL [] xref: TAO:0000910 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005111 ! medial forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000911 @@ -10833,9 +10834,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme part of median fin fold." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000912 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000913 @@ -10844,9 +10845,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is part of the valvula cerebelli and contains neuronal cell bodies." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000913 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000914 @@ -10856,10 +10857,10 @@ def: "Floor plate that is part of the telencephalon." [GOC:mh, ORCiD:0000-0001-9 synonym: "floorplate telencephalon" EXACT [] xref: TAO:0000914 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000915 @@ -10870,9 +10871,9 @@ subset: cell_slim synonym: "muscle pioneers somite 11" EXACT PLURAL [] xref: TAO:0000915 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000916 @@ -10883,9 +10884,9 @@ subset: cell_slim synonym: "muscle pioneers somite 14" EXACT PLURAL [] xref: TAO:0000916 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000917 @@ -10896,9 +10897,9 @@ subset: cell_slim synonym: "muscle pioneers somite 17" EXACT PLURAL [] xref: TAO:0000917 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000918 @@ -10909,9 +10910,9 @@ subset: cell_slim synonym: "muscle pioneers somite 20" EXACT PLURAL [] xref: TAO:0000918 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000919 @@ -10922,9 +10923,9 @@ subset: cell_slim synonym: "muscle pioneers somite 23" EXACT PLURAL [] xref: TAO:0000919 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000920 @@ -10935,9 +10936,9 @@ subset: cell_slim synonym: "muscle pioneers somite 26" EXACT PLURAL [] xref: TAO:0000920 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000921 @@ -10948,9 +10949,9 @@ subset: cell_slim synonym: "muscle pioneers somite 29" EXACT PLURAL [] xref: TAO:0000921 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000922 @@ -10961,9 +10962,9 @@ subset: cell_slim synonym: "muscle pioneers somite 4" EXACT PLURAL [] xref: TAO:0000922 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000923 @@ -10974,9 +10975,9 @@ subset: cell_slim synonym: "muscle pioneers somite 7" EXACT PLURAL [] xref: TAO:0000923 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000924 @@ -10985,9 +10986,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 1 that gives rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000924 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000072 ! somite 1 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000925 @@ -10996,9 +10997,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 10 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000925 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000926 @@ -11007,9 +11008,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 12 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000926 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000927 @@ -11018,9 +11019,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 16 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000927 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000928 @@ -11029,9 +11030,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 19 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000928 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000929 @@ -11040,9 +11041,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 21 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000929 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000930 @@ -11051,9 +11052,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 24 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000930 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000931 @@ -11062,9 +11063,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 27 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000931 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000932 @@ -11073,9 +11074,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 3 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000932 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000933 @@ -11084,9 +11085,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 5 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000933 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000934 @@ -11095,9 +11096,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 8 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000934 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000935 @@ -11107,8 +11108,8 @@ def: "Neural crest that is part of the midbrain." [GOC:ymb, ORCiD:0000-0002-9900 synonym: "mesencephalic neural crest" EXACT [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0000935 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000936 @@ -11118,9 +11119,9 @@ def: "Rod-like internal median skeletal support bones of the dorsal fin, which a synonym: "dorsal fin distal radials" EXACT PLURAL [] xref: TAO:0000936 is_a: ZFA:0001647 ! dorsal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000937 @@ -11129,9 +11130,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 13 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000937 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000938 @@ -11142,10 +11143,10 @@ synonym: "canalis centralis" EXACT [] synonym: "neural lumen" EXACT [] xref: TAO:0000938 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000939 @@ -11156,9 +11157,9 @@ synonym: "neuromast middle" EXACT [] synonym: "neuromasts middle" EXACT PLURAL [] xref: TAO:0000939 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000344 ! middle lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000940 @@ -11170,9 +11171,9 @@ synonym: "neuromasts posterior" EXACT PLURAL [] xref: TAO:0000940 is_a: ZFA:0000243 ! neuromast relationship: develops_from ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000944 ! posterior lateral line -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000941 @@ -11182,9 +11183,9 @@ def: "Diencephalic nucleus that is part of the synencephalon, is located adjacen xref: TAO:0000941 is_a: ZFA:0001659 ! diencephalic nucleus relationship: develops_from ZFA:0005871 ! region of the nucleus of the medial longitudinal fascicle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000943 @@ -11193,22 +11194,24 @@ namespace: zebrafish_anatomy def: "Skeleton that consists of the supporting endochondral proximal and distal radials and the dermal fins rays or lepidotrichia. The pectoral fin skeleton is located in the thoracic region of the body and articulates with the scapula and coracoid." [TAO:curator] xref: TAO:0000943 is_a: ZFA:0000027 ! paired fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000944 name: posterior lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880] +def: "One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-110811-14] +synonym: "midbody lateral line" RELATED [] +synonym: "midtrunk line" RELATED [] synonym: "pll" EXACT [] xref: TAO:0000944 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000946 @@ -11217,9 +11220,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 16 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000946 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000947 @@ -11229,9 +11232,9 @@ def: "Rod-like internal median skeletal support bones of the dorsal fin, which a synonym: "dorsal fin proximal radials" EXACT PLURAL [] xref: TAO:0000947 is_a: ZFA:0001647 ! dorsal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000948 @@ -11242,8 +11245,8 @@ synonym: "r3" EXACT [] xref: TAO:0000948 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001213 ! presumptive rhombomere 3 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000949 @@ -11254,8 +11257,8 @@ synonym: "r7" EXACT [] xref: TAO:0000949 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001209 ! presumptive rhombomere 7 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000950 @@ -11264,10 +11267,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 3." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000950 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000951 @@ -11276,10 +11279,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000951 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000952 @@ -11288,9 +11291,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 1 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000952 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000072 ! somite 1 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000953 @@ -11299,9 +11302,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 12 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000953 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000954 @@ -11310,9 +11313,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 15 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000954 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000955 @@ -11321,9 +11324,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 18 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000955 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000956 @@ -11332,9 +11335,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 20 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000956 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000957 @@ -11343,9 +11346,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 19 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000957 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000958 @@ -11354,9 +11357,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 23 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000958 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000959 @@ -11365,9 +11368,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 26 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000959 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000960 @@ -11376,9 +11379,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 29 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000960 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000961 @@ -11387,9 +11390,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 4 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000961 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000962 @@ -11398,9 +11401,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 7 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000962 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000963 @@ -11411,9 +11414,9 @@ subset: cell_slim synonym: "slow muscle cells somite 1" EXACT PLURAL [] xref: TAO:0000963 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000964 @@ -11424,9 +11427,9 @@ subset: cell_slim synonym: "slow muscle cells somite 12" EXACT PLURAL [] xref: TAO:0000964 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000965 @@ -11437,9 +11440,9 @@ subset: cell_slim synonym: "slow muscle cells somite 15" EXACT PLURAL [] xref: TAO:0000965 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000966 @@ -11450,9 +11453,9 @@ subset: cell_slim synonym: "slow muscle cells somite 18" EXACT PLURAL [] xref: TAO:0000966 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000967 @@ -11463,9 +11466,9 @@ subset: cell_slim synonym: "slow muscle cells somite 20" EXACT PLURAL [] xref: TAO:0000967 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000968 @@ -11474,9 +11477,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 21 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000968 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000969 @@ -11487,9 +11490,9 @@ subset: cell_slim synonym: "slow muscle cells somite 23" EXACT PLURAL [] xref: TAO:0000969 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000970 @@ -11500,9 +11503,9 @@ subset: cell_slim synonym: "slow muscle cells somite 26" EXACT PLURAL [] xref: TAO:0000970 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000971 @@ -11513,9 +11516,9 @@ subset: cell_slim synonym: "slow muscle cells somite 29" EXACT PLURAL [] xref: TAO:0000971 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000972 @@ -11526,9 +11529,9 @@ subset: cell_slim synonym: "slow muscle cells somite 4" EXACT PLURAL [] xref: TAO:0000972 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000973 @@ -11539,9 +11542,9 @@ subset: cell_slim synonym: "slow muscle cells somite 7" EXACT PLURAL [] xref: TAO:0000973 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000974 @@ -11550,8 +11553,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 10 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000974 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000975 @@ -11560,8 +11563,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 13 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000975 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000976 @@ -11570,8 +11573,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 16 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000976 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000977 @@ -11580,8 +11583,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 19 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000977 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000978 @@ -11590,8 +11593,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 22 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000978 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000979 @@ -11600,9 +11603,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 24 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000979 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000980 @@ -11611,8 +11614,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 25 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000980 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000981 @@ -11621,8 +11624,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 29 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000981 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000982 @@ -11631,8 +11634,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 6 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000982 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000983 @@ -11641,8 +11644,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 9 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000983 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000984 @@ -11650,9 +11653,9 @@ name: superior reticular formation tegmentum namespace: zebrafish_anatomy xref: TAO:0000984 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000985 @@ -11660,9 +11663,9 @@ name: ventral rhombencephalic commissure medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000985 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000986 @@ -11671,9 +11674,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 27 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000986 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000987 @@ -11682,9 +11685,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 3 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000987 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000988 @@ -11693,9 +11696,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 5 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000988 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000989 @@ -11704,9 +11707,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 8 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000989 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000990 @@ -11714,8 +11717,8 @@ name: intermediate mesenchyme namespace: zebrafish_anatomy xref: TAO:0000990 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000991 @@ -11724,9 +11727,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 10 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000991 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000992 @@ -11734,9 +11737,9 @@ name: lateral migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000992 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000993 @@ -11745,9 +11748,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue located at either side of the neural rod." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000993 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000994 @@ -11756,9 +11759,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 3." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000994 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000995 @@ -11767,9 +11770,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000995 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000996 @@ -11778,9 +11781,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the spinal cord." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000996 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000997 @@ -11790,8 +11793,8 @@ def: "Sensory trigeminal nucleus located at the end of the medulla oblongata." [ synonym: "medial funicular nucleus trigeminal nuclei" EXACT PLURAL [] xref: TAO:0000997 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000998 @@ -11799,8 +11802,8 @@ name: mesenchyme derived from head mesoderm namespace: zebrafish_anatomy xref: TAO:0000998 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000999 @@ -11808,8 +11811,8 @@ name: mesenchyme derived from trunk neural crest namespace: zebrafish_anatomy xref: TAO:0000999 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001000 @@ -11820,9 +11823,9 @@ synonym: "mesenchyme pectoral fins" EXACT PLURAL [] xref: TAO:0001000 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0000789 ! mesoderm pectoral fin bud -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001001 @@ -11831,9 +11834,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 13 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001001 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001002 @@ -11852,9 +11855,9 @@ subset: cell_slim synonym: "muscle pioneers somite 12" EXACT PLURAL [] xref: TAO:0001003 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001004 @@ -11865,9 +11868,9 @@ subset: cell_slim synonym: "muscle pioneers somite 15" EXACT PLURAL [] xref: TAO:0001004 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001005 @@ -11878,9 +11881,9 @@ subset: cell_slim synonym: "muscle pioneers somite 18" EXACT PLURAL [] xref: TAO:0001005 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001006 @@ -11891,9 +11894,9 @@ subset: cell_slim synonym: "muscle pioneers somite 21" EXACT PLURAL [] xref: TAO:0001006 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001007 @@ -11904,9 +11907,9 @@ subset: cell_slim synonym: "muscle pioneers somite 24" EXACT PLURAL [] xref: TAO:0001007 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001008 @@ -11917,9 +11920,9 @@ subset: cell_slim synonym: "muscle pioneers somite 27" EXACT PLURAL [] xref: TAO:0001008 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001009 @@ -11930,9 +11933,9 @@ subset: cell_slim synonym: "muscle pioneers somite 3" EXACT PLURAL [] xref: TAO:0001009 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001010 @@ -11943,9 +11946,9 @@ subset: cell_slim synonym: "muscle pioneers somite 5" EXACT PLURAL [] xref: TAO:0001010 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001011 @@ -11956,9 +11959,9 @@ subset: cell_slim synonym: "muscle pioneers somite 8" EXACT PLURAL [] xref: TAO:0001011 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001012 @@ -11967,9 +11970,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 16 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001012 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001013 @@ -11978,9 +11981,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 10 that gives rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001013 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001014 @@ -11989,9 +11992,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 13 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001014 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001015 @@ -12000,9 +12003,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 17 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001015 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001016 @@ -12011,9 +12014,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 2 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001016 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001017 @@ -12022,9 +12025,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 22 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001017 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001018 @@ -12033,9 +12036,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 25 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001018 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001019 @@ -12044,9 +12047,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 28 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001019 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001020 @@ -12055,9 +12058,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 30 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001020 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001021 @@ -12066,9 +12069,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 6 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001021 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001022 @@ -12077,9 +12080,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 9 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001022 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001023 @@ -12088,9 +12091,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 19 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001023 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001024 @@ -12099,8 +12102,8 @@ namespace: zebrafish_anatomy def: "Neural crest that is part of the trunk." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001024 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001025 @@ -12111,9 +12114,9 @@ synonym: "neuromast occipital" EXACT [] synonym: "neuromasts occipital" EXACT PLURAL [] xref: TAO:0001025 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000400 ! occipital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001026 @@ -12124,9 +12127,9 @@ synonym: "neuromast supraorbital" EXACT [] synonym: "neuromasts supraorbital" EXACT PLURAL [] xref: TAO:0001026 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000443 ! supraorbital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001027 @@ -12137,9 +12140,9 @@ synonym: "buccal cavity" EXACT [] synonym: "buccal chamber" EXACT [] xref: TAO:0001027 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001028 @@ -12151,9 +12154,9 @@ synonym: "parhypurapophysis" EXACT [] synonym: "parhypurapophysis process" EXACT [] xref: TAO:0001028 is_a: ZFA:0000859 ! specialized hemal arch and spine -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000438 ! parhypural -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001029 @@ -12164,9 +12167,9 @@ synonym: "ILM" EXACT [] synonym: "inner limiting membranes" EXACT PLURAL [] xref: TAO:0001029 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001030 @@ -12175,9 +12178,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 21 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001030 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001031 @@ -12188,8 +12191,8 @@ synonym: "r1" EXACT [] xref: TAO:0001031 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001207 ! presumptive rhombomere 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001032 @@ -12200,8 +12203,8 @@ synonym: "r4" EXACT [] xref: TAO:0001032 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001212 ! presumptive rhombomere 4 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001033 @@ -12210,10 +12213,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 1." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001033 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001034 @@ -12222,10 +12225,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001034 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001035 @@ -12234,10 +12237,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001035 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001036 @@ -12246,9 +12249,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 10 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001036 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001037 @@ -12257,9 +12260,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 13 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001037 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001038 @@ -12268,9 +12271,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 16 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001038 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001039 @@ -12279,9 +12282,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 19 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001039 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001040 @@ -12290,9 +12293,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 24 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001040 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001041 @@ -12301,9 +12304,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 21 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001041 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001042 @@ -12312,9 +12315,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 24 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001042 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001043 @@ -12323,9 +12326,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 27 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001043 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001044 @@ -12334,9 +12337,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 3 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001044 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001045 @@ -12345,9 +12348,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 5 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001045 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001046 @@ -12356,9 +12359,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 8 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001046 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001047 @@ -12369,9 +12372,9 @@ subset: cell_slim synonym: "slow muscle cells somite 10" EXACT PLURAL [] xref: TAO:0001047 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001048 @@ -12382,9 +12385,9 @@ subset: cell_slim synonym: "slow muscle cells somite 13" EXACT PLURAL [] xref: TAO:0001048 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001049 @@ -12395,9 +12398,9 @@ subset: cell_slim synonym: "slow muscle cells somite 16" EXACT PLURAL [] xref: TAO:0001049 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001050 @@ -12408,9 +12411,9 @@ subset: cell_slim synonym: "slow muscle cells somite 19" EXACT PLURAL [] xref: TAO:0001050 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001051 @@ -12422,9 +12425,9 @@ synonym: "posterior cerebral carotid artery" EXACT [] synonym: "posterior rami of the cerebral carotid artery" EXACT [] xref: TAO:0001051 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005081 ! internal carotid artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001052 @@ -12435,9 +12438,9 @@ synonym: "medial head vein" EXACT [] synonym: "PHBC" EXACT [] xref: TAO:0001052 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001053 @@ -12447,8 +12450,8 @@ def: "Artery that originates as rostral extensions of the paired lateral dorsal synonym: "PICA" EXACT [] xref: TAO:0001053 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001054 @@ -12458,8 +12461,8 @@ def: "Connect the outflow of the aortic arches to the dorsal aorta. The place wh synonym: "LDA" EXACT [] xref: TAO:0001054 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001055 @@ -12470,10 +12473,10 @@ synonym: "pronephric duct openings" EXACT PLURAL [] synonym: "urogenital opening" RELATED [ZFIN:ZDB-PUB-060508-11] xref: TAO:0001055 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct relationship: part_of ZFA:0000330 ! cloacal chamber -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001056 @@ -12484,9 +12487,9 @@ synonym: "myomeres" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001056 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000155 ! somite -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001057 @@ -12497,8 +12500,8 @@ synonym: "ISV" EXACT [] xref: TAO:0001057 is_a: ZFA:0000082 ! vein is_a: ZFA:0001285 ! intersegmental vessel -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001058 @@ -12510,9 +12513,9 @@ synonym: "tail fin" EXACT [] xref: TAO:0001058 is_a: ZFA:0005597 ! median fin relationship: develops_from ZFA:0001069 ! ventral fin fold -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001059 @@ -12525,9 +12528,9 @@ synonym: "CrDI" EXACT [] synonym: "rostral division of the internal carotid artery" EXACT [] xref: TAO:0001059 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005081 ! internal carotid artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001060 @@ -12537,8 +12540,8 @@ def: "Basidorsals are bilaterally paired cartilages on the dorsolateral side of synonym: "arcualia" RELATED [] xref: TAO:0001060 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000039 ! larval:days 7-13 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001061 @@ -12549,8 +12552,8 @@ synonym: "intersegmental arteries" EXACT PLURAL [] xref: TAO:0001061 is_a: ZFA:0000005 ! artery is_a: ZFA:0001285 ! intersegmental vessel -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001062 @@ -12560,8 +12563,8 @@ def: "Artery that branches dorsally from the cranial division of the internal ca synonym: "PMsA" EXACT [] xref: TAO:0001062 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001063 @@ -12569,9 +12572,9 @@ name: posterior caudal vein namespace: zebrafish_anatomy xref: TAO:0001063 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001064 @@ -12583,9 +12586,9 @@ synonym: "neuromere" RELATED [] synonym: "rhombomeres" EXACT PLURAL [] xref: TAO:0001064 is_a: ZFA:0001328 ! neuromere -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001065 @@ -12593,8 +12596,8 @@ name: lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001065 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001066 @@ -12605,9 +12608,9 @@ synonym: "dorsal arcocentrum" EXACT [] xref: TAO:0001066 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001060 ! basidorsal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001189 ! vertebra -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001067 @@ -12618,9 +12621,9 @@ synonym: "ACeV" EXACT [] synonym: "rostral cerebral vein" EXACT [] xref: TAO:0001067 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001068 @@ -12631,8 +12634,8 @@ synonym: "MsA" EXACT [] xref: TAO:0001068 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001062 ! primitive mesencephalic artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001069 @@ -12644,9 +12647,9 @@ synonym: "tail fin fold" EXACT [] synonym: "ventral fin" EXACT [] xref: TAO:0001069 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001070 @@ -12656,9 +12659,9 @@ def: "Presumptive structure part of the intermediate mesoderm, that is fated to synonym: "nephron primordium" EXACT [] xref: TAO:0001070 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001206 ! intermediate mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001071 @@ -12669,9 +12672,9 @@ synonym: "inner layer optic cup" EXACT [] synonym: "presumptive retinas" EXACT PLURAL [] xref: TAO:0001071 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001072 @@ -12682,9 +12685,9 @@ synonym: "thyroid follicles" EXACT PLURAL [] xref: TAO:0001072 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001081 ! thyroid primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001073 @@ -12693,8 +12696,8 @@ namespace: zebrafish_anatomy def: "Vasculature that runs along the rostral-caudal axis of the fish." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001073 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001074 @@ -12705,9 +12708,9 @@ comment: Taste buds are made up of vertically oriented, elongate cells form the synonym: "taste buds" EXACT PLURAL [] xref: TAO:0001074 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001075 @@ -12717,9 +12720,9 @@ def: "The narrow cleft along the medial wall of the lateral ventricle along the synonym: "choroidal fissures" EXACT PLURAL [] xref: TAO:0001075 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001076 @@ -12732,9 +12735,9 @@ synonym: "foregut" RELATED [] xref: TAO:0001076 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001077 @@ -12746,9 +12749,9 @@ xref: TAO:0001077 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000818 ! vagal neural crest relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001078 @@ -12758,9 +12761,9 @@ def: "Paired organ where maturation of T-lymphocytes occurs. The adult thymus lo xref: TAO:0001078 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001077 ! thymus primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001079 @@ -12771,8 +12774,8 @@ synonym: "blood vessel" RELATED [] xref: TAO:0001079 is_a: ZFA:0001490 ! cavitated compound organ is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001080 @@ -12783,8 +12786,8 @@ synonym: "sclerotomes" EXACT PLURAL [] xref: TAO:0001080 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001081 @@ -12795,9 +12798,9 @@ synonym: "thyroid primordia" EXACT PLURAL [] xref: TAO:0001081 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001082 @@ -12806,9 +12809,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is posterior to the developing notochord during tail bud extension." [ZFIN:ZDB-PUB-970723-15] xref: TAO:0001082 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000077 ! tail bud -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001083 @@ -12818,9 +12821,9 @@ def: "Proliferative region that is part of the ventricular system. The cells di synonym: "ventricular zones" EXACT PLURAL [] xref: TAO:0001083 is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001084 @@ -12829,9 +12832,9 @@ namespace: zebrafish_anatomy synonym: "epaxial myotome regions" EXACT PLURAL [] xref: TAO:0001084 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001085 @@ -12840,9 +12843,9 @@ namespace: zebrafish_anatomy synonym: "hypaxial muscle" EXACT [] xref: TAO:0001085 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001086 @@ -12855,9 +12858,9 @@ synonym: "non migratory adaxial cells" EXACT [] xref: TAO:0001086 is_a: ZFA:0009114 ! muscle cell relationship: develops_from ZFA:0000003 ! adaxial cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001089 @@ -12867,9 +12870,9 @@ synonym: "myocommata" EXACT [ZFIN:ZDB-PUB-151106-17] synonym: "myosepta" EXACT PLURAL [] xref: TAO:0001089 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001093 @@ -12878,8 +12881,8 @@ namespace: zebrafish_anatomy def: "Annotation with this anatomy term indicates that a structure was not specified by the author." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001093 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001094 @@ -12890,8 +12893,8 @@ synonym: "multi-cellular organism" EXACT [] xref: CARO:0000012 xref: TAO:0001094 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001095 @@ -12903,9 +12906,9 @@ synonym: "immature sensory patch" EXACT [] synonym: "immature sensory patches" EXACT PLURAL [] xref: TAO:0001095 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000051 ! otic vesicle -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001096 @@ -12915,9 +12918,9 @@ def: "Is an otic sensory epithelium that will develop into the mature anterior m synonym: "immature anterior maculae" EXACT PLURAL [] xref: TAO:0001096 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001095 ! immature macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001097 @@ -12927,9 +12930,9 @@ def: "Is an otic sensory epithelium that will develop into the mature posterior synonym: "immature posterior maculae" EXACT PLURAL [] xref: TAO:0001097 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001095 ! immature macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001098 @@ -12940,9 +12943,9 @@ subset: cell_slim synonym: "immature sensory hair cells anterior macula" EXACT PLURAL [] xref: TAO:0001098 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001096 ! immature anterior macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001099 @@ -12953,9 +12956,9 @@ subset: cell_slim synonym: "immature sensory hair cells posterior macula" EXACT PLURAL [] xref: TAO:0001099 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001097 ! immature posterior macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001100 @@ -12964,9 +12967,9 @@ namespace: zebrafish_anatomy def: "A duct that carries bile from the liver to the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001100 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001101 @@ -12975,8 +12978,8 @@ namespace: zebrafish_anatomy def: "Sensory system that uses taste buds to sense chemical compounds." [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0001101 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001104 @@ -12985,9 +12988,9 @@ namespace: zebrafish_anatomy xref: TAO:0001104 is_a: ZFA:0000017 ! endoderm disjoint_from: ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001105 @@ -12997,9 +13000,9 @@ def: "Anatomical structure that is part of the embryo and is comprised of portio synonym: "embryonic structures" EXACT PLURAL [] xref: TAO:0001105 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001106 @@ -13010,10 +13013,10 @@ synonym: "pharyngeal pouches" EXACT PLURAL [] xref: TAO:0001106 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001306 ! pharyngeal arch -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001107 @@ -13024,9 +13027,9 @@ synonym: "internal gill buds" EXACT PLURAL [] xref: TAO:0001107 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001108 @@ -13038,8 +13041,8 @@ synonym: "commissura rostral" EXACT [] synonym: "rostral commissure" EXACT [] xref: TAO:0001108 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001109 @@ -13053,9 +13056,9 @@ synonym: "egg" RELATED [] xref: CL:0000023 xref: TAO:0001109 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001110 @@ -13065,9 +13068,9 @@ def: "Oocyte development of zebrafish has been divided into five stages based on synonym: "egg follicle" EXACT [] xref: TAO:0001110 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000403 ! ovary -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001111 @@ -13077,9 +13080,9 @@ def: "Acellular anatomic structure that is a layer that separates the developin synonym: "vitelline envelope" EXACT [] xref: TAO:0001111 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001112 @@ -13089,9 +13092,9 @@ def: "Portion of tissue part of the ovarian follicle containing a single layer o synonym: "granulosa cell layers" EXACT PLURAL [] xref: TAO:0001112 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001113 @@ -13101,9 +13104,9 @@ def: "Multi-tissue structure of the ovarian follicle, composed of stromal cells synonym: "thecal cell layers" EXACT PLURAL [] xref: TAO:0001113 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001114 @@ -13112,8 +13115,8 @@ namespace: zebrafish_anatomy def: "Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001114 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001115 @@ -13123,8 +13126,8 @@ def: "Organism subdivision which is the part of the body posterior to the head a xref: TAO:0001115 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001116 @@ -13134,8 +13137,8 @@ def: "Portion of embryonic tissue determined by fate mapping to become a structu synonym: "presumptive structures" EXACT PLURAL [] xref: TAO:0001116 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0001117 @@ -13146,8 +13149,8 @@ synonym: "tail" RELATED [] xref: TAO:0001117 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001118 @@ -13161,9 +13164,9 @@ synonym: "UGP" EXACT [] synonym: "urogenital papillae" EXACT PLURAL [] xref: TAO:0001118 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001119 @@ -13174,9 +13177,9 @@ xref: TAO:0001119 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000255 ! paraxial mesoderm relationship: develops_from ZFA:0000787 ! mesenchyme derived from head neural crest -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001120 @@ -13186,9 +13189,9 @@ synonym: "neural ectoderm" EXACT [] synonym: "neurectoderm" EXACT [] xref: TAO:0001120 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001121 @@ -13197,8 +13200,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become the shield. Defined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001121 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000018 ! Gastrula:Germ-ring -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000018 ! gastrula:germ-ring +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0001122 @@ -13208,8 +13211,8 @@ def: "Portion of tissue that consists of a layer of cells that form during embry synonym: "embryonic germ layers" EXACT [] xref: TAO:0001122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000038 ! Larval:Day 6 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000038 ! larval:day 6 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001123 @@ -13220,8 +13223,8 @@ synonym: "median fin skeleton" EXACT [] synonym: "unpaired fin skeleton" EXACT [] xref: TAO:0001123 is_a: ZFA:0000317 ! postcranial axial skeleton -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001124 @@ -13230,9 +13233,9 @@ namespace: zebrafish_anatomy def: "Median fin skeleton located on the dorsal surface of the organism." [TAO:curator] xref: TAO:0001124 is_a: ZFA:0001123 ! axial fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001125 @@ -13242,9 +13245,9 @@ def: "The dorsal marginal region of the YSL where maternal dorsal determinants l synonym: "Nieuwkoop center" EXACT [] xref: TAO:0001125 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000012 ! Blastula:High +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001126 @@ -13255,9 +13258,9 @@ synonym: "NEM" EXACT [] synonym: "noninvoluting endocytic marginal cells" EXACT PLURAL [] xref: TAO:0001126 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000017 ! gastrula:50%-epiboly relationship: part_of ZFA:0000038 ! margin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001127 @@ -13266,8 +13269,8 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for the perception of light." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001127 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001128 @@ -13276,8 +13279,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 1" EXACT PLURAL [] xref: TAO:0001128 is_a: ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001129 @@ -13285,8 +13288,8 @@ name: pharyngeal pouches 2-6 namespace: zebrafish_anatomy xref: TAO:0001129 is_a: ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001130 @@ -13295,8 +13298,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 2" EXACT PLURAL [] xref: TAO:0001130 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001131 @@ -13305,8 +13308,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 3" EXACT PLURAL [] xref: TAO:0001131 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001132 @@ -13315,8 +13318,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 6" EXACT PLURAL [] xref: TAO:0001132 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001133 @@ -13325,8 +13328,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 5" EXACT PLURAL [] xref: TAO:0001133 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001134 @@ -13335,8 +13338,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 4" EXACT PLURAL [] xref: TAO:0001134 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001135 @@ -13347,8 +13350,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0001135 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000133 ! neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001136 @@ -13358,9 +13361,9 @@ def: "A layer separating the inner face of the dermis from the subjacent muscle synonym: "subcutis" EXACT [] xref: TAO:0001136 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001137 @@ -13370,8 +13373,8 @@ def: "Tooth row that is the ventralmost row of teeth on ceratobranchial 5 bone." synonym: "ventral tooth rows" EXACT PLURAL [] xref: TAO:0001137 is_a: ZFA:0001642 ! tooth row -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001138 @@ -13380,8 +13383,8 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for the perception of spatial orientation and auditory stimuli." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001138 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001139 @@ -13391,8 +13394,8 @@ def: "Tooth row that is the mediodorsal row of teeth on ceratobranchial 5 bone, synonym: "mediodorsal tooth rows" EXACT PLURAL [] xref: TAO:0001139 is_a: ZFA:0001642 ! tooth row -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001140 @@ -13402,8 +13405,8 @@ def: "Tooth row that is the dorsalmost row of teeth on ceratobranchial 5 bone." synonym: "dorsal tooth rows" EXACT PLURAL [] xref: TAO:0001140 is_a: ZFA:0001642 ! tooth row -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001141 @@ -13412,9 +13415,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001141 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001142 @@ -13423,9 +13426,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001142 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001143 @@ -13434,9 +13437,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 3V and anterior to tooth 5V in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001143 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001144 @@ -13445,9 +13448,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1V and anterior to tooth 3V in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001144 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001145 @@ -13456,9 +13459,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001145 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001146 @@ -13467,9 +13470,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001146 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001147 @@ -13478,9 +13481,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1MD and anterior to tooth 3MD in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001147 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001148 @@ -13489,9 +13492,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the dorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001148 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001140 ! dorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001149 @@ -13500,8 +13503,8 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for olfaction. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001149 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001150 @@ -13510,9 +13513,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the dorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001150 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001140 ! dorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001151 @@ -13521,9 +13524,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001151 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001152 @@ -13532,9 +13535,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2MD and anterior to tooth 4MD in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001152 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001153 @@ -13545,9 +13548,9 @@ synonym: "dental primordium" EXACT [] synonym: "tooth germ" EXACT [] xref: TAO:0001153 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001174 ! pharyngeal epithelium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001154 @@ -13556,9 +13559,9 @@ namespace: zebrafish_anatomy def: "Musculature part of the anal fin." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001154 is_a: ZFA:0000207 ! fin musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001162 ! anal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001155 @@ -13568,9 +13571,9 @@ def: "Nervous system that is involved primarily with the internal regulation of xref: TAO:0001155 is_a: ZFA:0001574 ! autonomic nervous system relationship: develops_from ZFA:0001334 ! presumptive enteric nervous system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001156 @@ -13580,9 +13583,9 @@ def: "Dorsolateral placode that gives rise to the posterior lateral line." [GOC: synonym: "posterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001156 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001157 @@ -13593,9 +13596,9 @@ synonym: "posterior lateral line primordia" EXACT PLURAL [] xref: TAO:0001157 is_a: ZFA:0000228 ! lateral line primordium relationship: develops_from ZFA:0001156 ! posterior lateral line placode -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001158 @@ -13604,8 +13607,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that produces, transports and secretes peptides." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001158 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001159 @@ -13614,8 +13617,8 @@ namespace: zebrafish_anatomy def: "System that provides protection against foreign and abnormal cells and removes cellular debris." [ISBN:0314472304] xref: TAO:0001159 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001160 @@ -13634,8 +13637,8 @@ synonym: "pectoral fins" EXACT PLURAL [] xref: TAO:0001161 is_a: ZFA:0005596 ! paired fin relationship: develops_from ZFA:0000141 ! pectoral fin bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001162 @@ -13645,9 +13648,9 @@ def: "Median fin that is located posterior to the anus." [TAO:curator] xref: TAO:0001162 is_a: ZFA:0005597 ! median fin relationship: develops_from ZFA:0001069 ! ventral fin fold -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001163 @@ -13656,8 +13659,8 @@ namespace: zebrafish_anatomy def: "Supraneural located between vertebra 6 and 7." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001163 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001164 @@ -13667,8 +13670,8 @@ def: "Supraneural located between vertebra 5 and 6." [ZFIN:ZDB-PUB-031103-13] synonym: "sn6" EXACT [] xref: TAO:0001164 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001165 @@ -13678,8 +13681,8 @@ def: "Supraneural located between vertebra 4 and 5." [ZDB:ZDB-PUB-031103-13] synonym: "sn5" EXACT [] xref: TAO:0001165 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001166 @@ -13688,8 +13691,8 @@ namespace: zebrafish_anatomy def: "Supraneural located between vertebra 8 and 9." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001166 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001167 @@ -13699,8 +13702,8 @@ def: "Vertebra that is posteriorly adjacent to the neurocranium." [TAO:curator] synonym: "cervical vertebra 1" EXACT [] xref: TAO:0001167 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001168 @@ -13710,8 +13713,8 @@ def: "Vertebra that is posteriorly adjacent to vertebra 1." [TAO:curator] synonym: "cervical vertebra 2" EXACT [] xref: TAO:0001168 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001169 @@ -13720,8 +13723,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 2." [TAO:curator] xref: TAO:0001169 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001170 @@ -13730,8 +13733,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 3." [TAO:curator] xref: TAO:0001170 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001171 @@ -13742,10 +13745,10 @@ comment: The os suspensorium is similar in shape to a rib, but the other ribs in xref: TAO:0001171 is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001170 ! vertebra 4 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001172 @@ -13754,10 +13757,10 @@ namespace: zebrafish_anatomy def: "Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus. Located dorsal to the neural tube." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001172 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001191 ! supraneural 2 relationship: part_of ZFA:0001192 ! supraneural 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001173 @@ -13767,8 +13770,8 @@ def: "Median fin that is located on the dorsal surface of the fish." [GOC:cvs, O xref: TAO:0001173 is_a: ZFA:0005597 ! median fin relationship: develops_from ZFA:0000102 ! dorsal fin fold -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001174 @@ -13778,9 +13781,9 @@ def: "Epithelium lining the pharynx consisting largely of simple columnar epithe xref: TAO:0001174 is_a: ZFA:0001495 ! unilaminar epithelium relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001175 @@ -13789,8 +13792,8 @@ namespace: zebrafish_anatomy def: "Embryonic structure that is the dome of cytoplasm that segregates from the yolk toward the animal pole during and after the one cell-stage, and which undergoes cleavage." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001175 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001176 @@ -13800,8 +13803,8 @@ def: "Embryonic structure that is composed of the cellular part of the embryo, e xref: TAO:0001176 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001175 ! blastodisc -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0001177 @@ -13809,10 +13812,10 @@ name: roof plate spinal cord region namespace: zebrafish_anatomy xref: TAO:0001177 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001178 @@ -13821,9 +13824,9 @@ namespace: zebrafish_anatomy synonym: "ventral ectoderm" EXACT [] xref: TAO:0001178 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001179 @@ -13833,9 +13836,9 @@ def: "The outer layer of the epidermis. The living cells form single cell layer xref: TAO:0001179 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001185 ! periderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001180 @@ -13845,9 +13848,9 @@ def: "Lower layer of the epidermis. Composed of a single layer of cells. The ma synonym: "basal epidermal layer" EXACT [] xref: TAO:0001180 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001181 @@ -13856,9 +13859,9 @@ namespace: zebrafish_anatomy def: "The tissue which lies between the basal stratum and the superficial stratum. This layer is composed of a variable number of cell layers which contain mucous goblet cells, club cells and sensory cells. Most of the cells of this region are undifferentiated. They serve as a reservoir to replace dead cells in any of the epidermis regions." [ZFIN:ZDB-PUB-040726-12] xref: TAO:0001181 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001182 @@ -13869,9 +13872,9 @@ synonym: "stratum compactum" EXACT [] xref: TAO:0001182 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001186 ! collagenous dermal stroma -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001183 @@ -13881,9 +13884,9 @@ def: "Outer portion of the dermis composed of a loose collagenous matrix housing synonym: "stratum laxum" EXACT [] xref: TAO:0001183 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001184 @@ -13894,8 +13897,8 @@ synonym: "pelvic fins" EXACT PLURAL [] xref: TAO:0001184 is_a: ZFA:0005596 ! paired fin relationship: develops_from ZFA:0001384 ! pelvic fin bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001185 @@ -13906,9 +13909,9 @@ synonym: "EVL" RELATED [] xref: TAO:0001185 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000086 ! EVL -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001186 @@ -13918,9 +13921,9 @@ def: "Acellular anatomical structure that is a layer of collagen fibrils in the synonym: "primary dermal stroma" EXACT [] xref: TAO:0001186 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001187 @@ -13930,9 +13933,9 @@ def: "Embryonic structure that gives rise to the midbrain hindbrain boundary." [ synonym: "presumptive midbrain-hindbrain boundary" EXACT [] xref: TAO:0001187 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001188 @@ -13941,9 +13944,9 @@ namespace: zebrafish_anatomy def: "The Weberian apparatus consists of the modified anteriormost four vertebrae and associated structures of otophysans which transduce sound or pressure waves from the tunica externa of the swim bladder to the inner ear (Alexander, 1962)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001188 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001189 @@ -13953,9 +13956,9 @@ def: "All serially repeated ossified, cartilaginous, and ligamentous elements ar synonym: "vertebrae" EXACT PLURAL [] xref: TAO:0001189 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001190 @@ -13965,9 +13968,9 @@ def: "The first four vertebrae, which are part of the Weberian apparatus." [GOC: synonym: "Weberian vertebrae" EXACT PLURAL [] xref: TAO:0001190 is_a: ZFA:0000263 ! precaudal vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001191 @@ -13978,9 +13981,9 @@ synonym: "small supraneural" EXACT [] synonym: "sn2" EXACT [] xref: TAO:0001191 is_a: ZFA:0000442 ! supraneural -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001363 ! neural complex -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001192 @@ -13991,9 +13994,9 @@ synonym: "large supraneural" EXACT [] synonym: "sn3" EXACT [] xref: TAO:0001192 is_a: ZFA:0000442 ! supraneural -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001363 ! neural complex -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001193 @@ -14002,8 +14005,8 @@ namespace: zebrafish_anatomy def: "Supraneural located between vertebra 7 and 8." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001193 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001194 @@ -14012,8 +14015,8 @@ namespace: zebrafish_anatomy def: "Neural crest that is part of the head." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001194 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001195 @@ -14023,9 +14026,9 @@ def: "The anterior portion of the adenohypophysis. Comprised of the proximal and synonym: "pars distalis" EXACT [] xref: TAO:0001195 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001282 ! adenohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001196 @@ -14042,9 +14045,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of the adenohypophysis." [ZFIN:ZDB-PUB-080616-4] xref: TAO:0001197 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001282 ! adenohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001198 @@ -14055,8 +14058,8 @@ synonym: "pituitary placode" EXACT [] xref: TAO:0001198 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001178 ! non neural ectoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001199 @@ -14068,9 +14071,9 @@ synonym: "infundibulum of hypothalamus" EXACT [] synonym: "pituitary stalk" EXACT [] xref: TAO:0001199 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001271 ! neurohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001200 @@ -14079,8 +14082,8 @@ namespace: zebrafish_anatomy def: "Islands of eosinic cells found on the lateroventral surface of the kidney. Function is thought to be that of the parathyroid gland in other vertebrates, which are lacking in fishes. These cells secrete hypocalcin (teleocalcin) to regulate calcium metabolism." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001200 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001201 @@ -14088,9 +14091,9 @@ name: ventral lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001201 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000083 ! ventral mesoderm -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0001202 @@ -14101,9 +14104,9 @@ synonym: "eye cup" EXACT [] xref: TAO:0001202 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000050 ! optic vesicle -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001203 @@ -14116,9 +14119,9 @@ synonym: "ciliary body" RELATED [] synonym: "ciliary epithelial zone" EXACT [] xref: TAO:0001203 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001204 @@ -14128,8 +14131,8 @@ def: "Region of the mesoderm that is located along the rostral-caudal axis of th xref: TAO:0001204 is_a: ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0001378 ! axial hypoblast -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001205 @@ -14139,10 +14142,10 @@ def: "Meckel's cartilage is the bilaterally paired, rod-like, cartilaginous vent synonym: "ventral mandibular cartilage" EXACT [] xref: TAO:0001205 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0007117 ! Meckel's cartilage-palatoquadrate cartilage joint relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001206 @@ -14151,8 +14154,8 @@ namespace: zebrafish_anatomy synonym: "IM" EXACT [] xref: TAO:0001206 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001207 @@ -14161,9 +14164,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001207 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001208 @@ -14172,9 +14175,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 2." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001208 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001209 @@ -14183,9 +14186,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 7." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001209 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001210 @@ -14194,9 +14197,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 6." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001210 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001211 @@ -14205,9 +14208,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 5." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001211 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001212 @@ -14216,9 +14219,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 4." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001212 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001213 @@ -14227,9 +14230,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001213 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001214 @@ -14238,9 +14241,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 8." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001214 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001215 @@ -14250,9 +14253,9 @@ def: "Multi-tissue structure that is paired, and is situated one on either side synonym: "thalami" EXACT PLURAL [] xref: TAO:0001215 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001216 @@ -14264,9 +14267,9 @@ synonym: "pharyngeal skeleton" EXACT [] xref: TAO:0001216 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0005771 ! ectomesenchyme -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001217 @@ -14275,8 +14278,8 @@ namespace: zebrafish_anatomy def: "Tissue along the lateral edges of the shield that is fated to develop into the hypochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001217 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001218 @@ -14285,9 +14288,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, the part of the neural plate fated to become floor plate." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001218 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001220 @@ -14297,9 +14300,9 @@ def: "Pharyngeal arch cartilage that is ventral, median, and associated with mor synonym: "copulae" EXACT PLURAL [] xref: TAO:0001220 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001221 @@ -14309,8 +14312,8 @@ def: "Copula that is ventral, median, and associated with pharyngeal arches 3-5. synonym: "anterior copula" EXACT [] xref: TAO:0001221 is_a: ZFA:0001220 ! copula -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001222 @@ -14320,8 +14323,8 @@ def: "Copula that is ventral, median, and associated with pharyngeal arches 6-7. synonym: "posterior copula" EXACT [] xref: TAO:0001222 is_a: ZFA:0001220 ! copula -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001223 @@ -14331,8 +14334,8 @@ def: "Basibranchial 1 ossifies posterior to the basihyal and anterior to the fir xref: TAO:0001223 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001224 @@ -14342,8 +14345,8 @@ def: "Basibranchial 2 ossifies in copula 1 posterior to the first hypobranchials xref: TAO:0001224 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001225 @@ -14353,8 +14356,8 @@ def: "Basibranchial 3 ossifies in copula 1 posterior to the second hypobranchial xref: TAO:0001225 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001226 @@ -14364,8 +14367,8 @@ def: "Occasionally, a fourth basibranchial ossifies in the narrow copula 2 carti xref: TAO:0001226 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001222 ! copula 2 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001227 @@ -14379,10 +14382,10 @@ synonym: "oral jaw skeleton" EXACT [] synonym: "pharyngeal arch 1 skeleton" EXACT [] xref: TAO:0001227 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: part_of ZFA:0001612 ! pharyngeal arch 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001228 @@ -14394,10 +14397,10 @@ synonym: "gill arch 1 skeleton" EXACT [] synonym: "visceral arch 3 skeleton" EXACT [] xref: TAO:0001228 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001606 ! pharyngeal arch 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001229 @@ -14409,10 +14412,10 @@ synonym: "gill arch 5 skeleton" EXACT [] synonym: "visceral arch 7 skeleton" EXACT [] xref: TAO:0001229 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001610 ! pharyngeal arch 7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001230 @@ -14424,10 +14427,10 @@ synonym: "gill arch 4 skeleton" EXACT [] synonym: "visceral arch 6 skeleton" EXACT [] xref: TAO:0001230 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001609 ! pharyngeal arch 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001231 @@ -14439,10 +14442,10 @@ synonym: "gill arch 2 skeleton" EXACT [] synonym: "visceral arch 4 skeleton" EXACT [] xref: TAO:0001231 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001607 ! pharyngeal arch 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001232 @@ -14454,10 +14457,10 @@ synonym: "gill arch 3 skeleton" EXACT [] synonym: "visceral arch 5 skeleton" EXACT [] xref: TAO:0001232 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001608 ! pharyngeal arch 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001233 @@ -14468,9 +14471,9 @@ synonym: "hypobranchial 1 bones" EXACT PLURAL [] xref: TAO:0001233 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001524 ! hypobranchial 1 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001234 @@ -14482,9 +14485,9 @@ synonym: "hypobranchial 4 bones" EXACT PLURAL [] xref: TAO:0001234 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001523 ! hypobranchial 4 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001235 @@ -14495,9 +14498,9 @@ synonym: "hypobranchial 3 bones" EXACT PLURAL [] xref: TAO:0001235 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001526 ! hypobranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001236 @@ -14508,9 +14511,9 @@ synonym: "hypobranchial 2 bones" EXACT PLURAL [] xref: TAO:0001236 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001525 ! hypobranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001237 @@ -14520,9 +14523,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001237 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001520 ! ceratobranchial 1 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001238 @@ -14532,9 +14535,9 @@ def: "Multi-tissue structure that consists of pigmented stroma and is connected synonym: "irises" EXACT PLURAL [] xref: TAO:0001238 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001239 @@ -14544,9 +14547,9 @@ def: "Ceratobranchial bone that is the most posterior, bilaterally paired ventra xref: TAO:0001239 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001521 ! ceratobranchial 5 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001240 @@ -14556,9 +14559,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001240 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001519 ! ceratobranchial 4 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001241 @@ -14568,9 +14571,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001241 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001518 ! ceratobranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001242 @@ -14580,9 +14583,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001242 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001517 ! ceratobranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001243 @@ -14592,9 +14595,9 @@ def: "Epibranchial bone that is bilaterally paired and articulates laterally wit xref: TAO:0001243 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001528 ! epibranchial 1 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001244 @@ -14604,9 +14607,9 @@ def: "Epibranchial cartilage that is bilaterally paired and appears as a separat synonym: "interbranchial IV" EXACT [] xref: TAO:0001244 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001245 @@ -14616,9 +14619,9 @@ def: "Epibranchial bone that is bilaterally paired and articulates laterally wit xref: TAO:0001245 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001531 ! epibranchial 4 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001246 @@ -14628,9 +14631,9 @@ def: "Epibranchial bone that is bilaterally paired and articulates laterally wit xref: TAO:0001246 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001530 ! epibranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001247 @@ -14641,9 +14644,9 @@ synonym: "infrapharyngobranchial 3" EXACT [] xref: TAO:0001247 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001529 ! epibranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001248 @@ -14662,9 +14665,9 @@ synonym: "rostral pancreas" RELATED [ZFIN:ZDB-PUB-050623-3.] xref: TAO:0001249 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001369 ! anterior pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000140 ! pancreas -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001250 @@ -14675,9 +14678,9 @@ synonym: "infrapharyngobranchial 2" EXACT [] xref: TAO:0001250 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001536 ! pharyngobranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001251 @@ -14688,9 +14691,9 @@ synonym: "infrapharyngobranchial 4 cartilage" EXACT [] synonym: "infrapharyngobranchials" EXACT [] xref: TAO:0001251 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001252 @@ -14701,9 +14704,9 @@ synonym: "pharyngobranchial 3 bones" EXACT PLURAL [] xref: TAO:0001252 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001534 ! pharyngobranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001253 @@ -14726,9 +14729,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the lateral part of the floor plate." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001256 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001257 @@ -14737,9 +14740,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the medial part of the floor plate and is located adjacent to the notochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001257 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001258 @@ -14749,10 +14752,10 @@ def: "Floor plate that is part of the rhombomeres." [GOC:mh, ORCiD:0000-0001-911 synonym: "floor plate hindbrain region" RELATED [] xref: TAO:0001258 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001259 @@ -14762,10 +14765,10 @@ synonym: "forebrain vesicle" EXACT [] synonym: "prosencephalic ventricle" EXACT [] xref: TAO:0001259 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000109 ! forebrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001260 @@ -14778,9 +14781,9 @@ synonym: "tail pancreas" RELATED [ZFIN:ZDB-PUB-080922-7] xref: TAO:0001260 is_a: ZFA:0001489 ! compound organ component relationship: develops_from ZFA:0001370 ! posterior pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000140 ! pancreas -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001261 @@ -14788,9 +14791,9 @@ name: ventricular system namespace: zebrafish_anatomy xref: TAO:0001261 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001262 @@ -14801,9 +14804,9 @@ synonym: "gonadal primordium" EXACT [] synonym: "undifferentiated gonad" EXACT [] xref: TAO:0001262 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001263 @@ -14814,8 +14817,8 @@ synonym: "ovarian follicle stage 1" EXACT [] synonym: "previtellogenic ovarian follicle" EXACT [] xref: TAO:0001263 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001264 @@ -14826,8 +14829,8 @@ synonym: "mature ovarian follicle" EXACT [] synonym: "ovarian follicle stage 4" EXACT [] xref: TAO:0001264 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001265 @@ -14838,8 +14841,8 @@ synonym: "ovarian follicle stage 2" EXACT [] synonym: "ovarian follicles stage II" EXACT PLURAL [] xref: TAO:0001265 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001266 @@ -14850,8 +14853,8 @@ synonym: "ovarian follicle stage 3" EXACT [] synonym: "ovarian follicles stage III" EXACT PLURAL [] xref: TAO:0001266 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001267 @@ -14861,9 +14864,9 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th synonym: "head vasculature" EXACT [] xref: TAO:0001267 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001268 @@ -14875,9 +14878,9 @@ synonym: "efferent tubule" EXACT [] synonym: "sperm ducts" EXACT PLURAL [] xref: TAO:0001268 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001269 @@ -14887,8 +14890,8 @@ def: "Fin undergoing the process of regeneration." [GOC:cvs, ORCiD:0000-0002-224 synonym: "regenerating fins" EXACT PLURAL [] xref: TAO:0001269 is_a: ZFA:0000108 ! fin -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001270 @@ -14898,9 +14901,9 @@ def: "A regenerating tissue composed of a proliferative mass of undifferentiated synonym: "regeneration blastema" EXACT [ZFIN:ZDB-PUB-061108-12] xref: TAO:0001270 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001269 ! regenerating fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001271 @@ -14909,9 +14912,9 @@ namespace: zebrafish_anatomy synonym: "posterior pituitary" EXACT [] xref: TAO:0001271 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001272 @@ -14924,11 +14927,11 @@ synonym: "upper jaw" EXACT [] synonym: "upper pharyngeal jaw" EXACT [] xref: TAO:0001272 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000444 ! suspensorium relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001273 @@ -14940,10 +14943,10 @@ synonym: "mandible" EXACT [] synonym: "mandibular series" EXACT [] xref: TAO:0001273 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001274 @@ -14954,10 +14957,10 @@ synonym: "coronoid" RELATED [] synonym: "sesamoid articular" EXACT [] xref: TAO:0001274 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001275 @@ -14973,10 +14976,10 @@ namespace: zebrafish_anatomy synonym: "hyoid bars" EXACT [] xref: TAO:0001276 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: part_of ZFA:0001611 ! pharyngeal arch 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001277 @@ -14987,9 +14990,9 @@ synonym: "camera arerea weberiana" EXACT [] xref: TAO:0001277 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005337 ! anterior swim bladder bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001278 @@ -14998,9 +15001,9 @@ namespace: zebrafish_anatomy def: "The posterior compartment of the swim bladder plays a key role in buoyancy control. It is connected to the anterior chamber via the ductus communicans. This chamber corresponds to the swim bladder found in larval fish." [ZFIN:ZDB-PUB-060306-11] xref: TAO:0001278 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001279 @@ -15010,8 +15013,8 @@ def: "Branchiostegal ray that is the most anterior ray which ossifies last (5.5 synonym: "branchiostegal rays 1" EXACT PLURAL [] xref: TAO:0001279 is_a: ZFA:0000476 ! branchiostegal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001280 @@ -15021,8 +15024,8 @@ def: "Branchiostegal ray that is the most posterior ray which ossifies first (3. synonym: "branchiostegal rays 3" EXACT PLURAL [] xref: TAO:0001280 is_a: ZFA:0000476 ! branchiostegal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001281 @@ -15032,8 +15035,8 @@ def: "Branchiostegal ray 2 is between rays 1 and 3 and ossifies second." [GOC:cv synonym: "branchiostegal rays 2" EXACT PLURAL [] xref: TAO:0001281 is_a: ZFA:0000476 ! branchiostegal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001282 @@ -15046,9 +15049,9 @@ synonym: "anterior pituitary" EXACT [] xref: TAO:0001282 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001198 ! adenohypophyseal placode -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001283 @@ -15058,9 +15061,9 @@ def: "Anatomical space that is located in the center of the iris and allows ligh synonym: "pupils" EXACT PLURAL [] xref: TAO:0001283 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001284 @@ -15071,9 +15074,9 @@ synonym: "choroid fissure" RELATED [] synonym: "optic fissures" EXACT PLURAL [] xref: TAO:0001284 is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001285 @@ -15086,10 +15089,10 @@ synonym: "segmental vessel" EXACT [] xref: TAO:0001285 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0000014 ! dorsal aorta -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001286 @@ -15098,8 +15101,8 @@ namespace: zebrafish_anatomy def: "Post-vent vasculature which forms an interconnecting network of venous tubes. The caudal vein plexus forms via a very active period of angiogenic sprouting, beginning at 25 hpf when venous endothelial cells of the posterior cardinal vein sprout and migrate ventrally, then fuse with neighboring tip cells. This process reiterates during a five-hour window, forming a primordial plexus by 30 hpf. By two days of development, the primitive caudal vein plexus has matured into a complex, well-perfused, venous vascular network. Starting at 4 dpf the caudal vein plexus starts to remodel and simplify." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010205-5, ZFIN:ZDB-PUB-111011-36] xref: TAO:0001286 is_a: ZFA:0005932 ! developmental vascular plexus -relationship: end ZFS:0000039 ! Larval:Days 7-13 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000039 ! larval:days 7-13 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001287 @@ -15110,9 +15113,9 @@ synonym: "mesonephric tubule" EXACT [] synonym: "renal tubules" EXACT PLURAL [] xref: TAO:0001287 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005282 ! nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001288 @@ -15123,9 +15126,9 @@ synonym: "glomerular capillary tuft" RELATED [] synonym: "renal glomeruli" EXACT PLURAL [] xref: TAO:0001288 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001289 @@ -15139,9 +15142,9 @@ synonym: "retinal ciliary marginal zone" EXACT [] synonym: "retinal proliferative zone" RELATED [] xref: TAO:0001289 is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001290 @@ -15151,10 +15154,10 @@ def: "Anterior part of the embryonic alimentary canal formed as an invagination synonym: "oral ectoderm" RELATED [ZFIN:ZDB-PUB-100726-23] xref: TAO:0001290 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000112 ! gut relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001291 @@ -15167,8 +15170,8 @@ xref: TAO:0001291 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0000762 ! facio-acoustic neural crest relationship: develops_from ZFA:0001295 ! facial placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001292 @@ -15178,9 +15181,9 @@ def: "The stalk emanates from the diencephalic roof at a left-of-medial position synonym: "pineal stalk" EXACT [] xref: TAO:0001292 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001293 @@ -15190,9 +15193,9 @@ synonym: "posterior kidneys" EXACT PLURAL [] xref: TAO:0001293 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0000151 ! pronephros -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001294 @@ -15203,9 +15206,9 @@ synonym: "epibranchial placodes" EXACT PLURAL [] xref: TAO:0001294 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007061 ! epibranchial field -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001295 @@ -15215,8 +15218,8 @@ def: "Epibranchial placode that gives rise to the facial ganglia." [GOC:mh, ORCi synonym: "geniculate placode" EXACT [] xref: TAO:0001295 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001296 @@ -15226,8 +15229,8 @@ def: "Epibranchial placode that gives rise to the glossopharyngeal ganglia. Asso synonym: "petrosal placode" EXACT [] xref: TAO:0001296 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001297 @@ -15236,8 +15239,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 1." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-31] xref: TAO:0001297 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001298 @@ -15246,8 +15249,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 2." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-31] xref: TAO:0001298 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001299 @@ -15256,8 +15259,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 3." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-3] xref: TAO:0001299 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001300 @@ -15266,8 +15269,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 4." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-31] xref: TAO:0001300 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001301 @@ -15279,8 +15282,8 @@ xref: TAO:0001301 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0001296 ! glossopharyngeal placode relationship: develops_from ZFA:0007066 ! glossopharyngeal neural crest -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001302 @@ -15291,8 +15294,8 @@ synonym: "nodose ganglion 1" EXACT [] xref: TAO:0001302 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001297 ! vagal placode 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001303 @@ -15303,8 +15306,8 @@ synonym: "nodose ganglion 2" EXACT [] xref: TAO:0001303 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001298 ! vagal placode 2 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001304 @@ -15315,8 +15318,8 @@ synonym: "nodose ganglion 3" EXACT [] xref: TAO:0001304 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001299 ! vagal placode 3 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001305 @@ -15327,8 +15330,8 @@ synonym: "nodose ganglion 4" EXACT [] xref: TAO:0001305 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001300 ! vagal placode 4 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001306 @@ -15338,9 +15341,9 @@ def: "One of a series of paired bony or cartilaginous arches that develop along synonym: "pharyngeal arches" EXACT PLURAL [] xref: TAO:0001306 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001307 @@ -15349,9 +15352,9 @@ namespace: zebrafish_anatomy def: "Muscle system of the pharyngeal region." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001307 is_a: ZFA:0000328 ! cephalic musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001306 ! pharyngeal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001308 @@ -15362,9 +15365,9 @@ synonym: "body part" EXACT [] xref: CARO:0000032 xref: TAO:0001308 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0001309 @@ -15375,9 +15378,9 @@ synonym: "neurogenic placodes" EXACT PLURAL [] xref: TAO:0001309 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001310 @@ -15388,8 +15391,8 @@ synonym: "dorsolateral placodes" EXACT PLURAL [] xref: TAO:0001310 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007060 ! dorsolateral field -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001311 @@ -15398,10 +15401,10 @@ namespace: zebrafish_anatomy synonym: "roof plate hindbrain" RELATED [] xref: TAO:0001311 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001064 ! rhombomere relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001312 @@ -15411,8 +15414,8 @@ synonym: "anterodorsal lateral line ganglion" EXACT [] xref: TAO:0001312 is_a: ZFA:0001391 ! anterior lateral line ganglion relationship: develops_from ZFA:0001316 ! anterior lateral line placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001313 @@ -15422,8 +15425,8 @@ synonym: "anteroventral lateral line ganglion" EXACT [] xref: TAO:0001313 is_a: ZFA:0001391 ! anterior lateral line ganglion relationship: develops_from ZFA:0001316 ! anterior lateral line placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001314 @@ -15435,8 +15438,8 @@ synonym: "posterior lateral line ganglia" EXACT PLURAL [] xref: TAO:0001314 is_a: ZFA:0000120 ! lateral line ganglion relationship: develops_from ZFA:0001156 ! posterior lateral line placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001315 @@ -15448,9 +15451,9 @@ synonym: "AVC" EXACT [] xref: TAO:0001315 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001723 ! presumptive atrioventricular canal -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001316 @@ -15460,9 +15463,9 @@ def: "Dorsolateral placode that gives rise to the anterior lateral line." [GOC:y synonym: "anterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001316 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001317 @@ -15473,9 +15476,9 @@ comment: ZDB-PUB-080309-14 says these don't exist but looked at 55 hpf rather th synonym: "endocardial cushions" EXACT PLURAL [] xref: TAO:0001317 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001320 ! endocardium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001318 @@ -15484,9 +15487,9 @@ namespace: zebrafish_anatomy def: "The extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001318 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001319 @@ -15496,9 +15499,9 @@ synonym: "cardiac muscle" RELATED [] synonym: "heart muscle " RELATED [] xref: TAO:0001319 is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001320 @@ -15508,9 +15511,9 @@ def: "Layer that lines the lumen of the heart." [GOC:cvs, ORCiD:0000-0002-2244-7 xref: TAO:0001320 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001724 ! presumptive endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001321 @@ -15521,10 +15524,10 @@ synonym: "trabecula" EXACT [] synonym: "trabecular cartilage" EXACT [] xref: TAO:0001321 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001322 @@ -15534,8 +15537,8 @@ def: "A tract originating in the epiphysis and fasciculating with the tract of t synonym: "DVDT" EXACT [] xref: TAO:0001322 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001323 @@ -15545,9 +15548,9 @@ def: "The terminal region of the mid intestine is comprised of specialized enter xref: TAO:0001323 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001324 @@ -15555,12 +15558,12 @@ name: enteric musculature namespace: zebrafish_anatomy def: "Musculature of the gut." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] synonym: "gut musculature" EXACT [] -synonym: "tunica muscularis" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] +synonym: "tunica muscularis" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0001324 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001325 @@ -15571,9 +15574,9 @@ synonym: "neural prezygapophyses" EXACT PLURAL [] synonym: "neural prezygopophyses" EXACT [] xref: TAO:0001325 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001326 @@ -15582,9 +15585,9 @@ namespace: zebrafish_anatomy def: "Epithelium which borders the anterior and equitorial region of the lens. Lens growth in zebrafish occurs via the differentiation of additional fibre cells from lens epithelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070504-24, ZFIN:ZDB-PUB-100202-20] xref: TAO:0001326 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001327 @@ -15593,8 +15596,8 @@ namespace: zebrafish_anatomy def: "Trunk musculature that is located in ventral wall of abdomen." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001327 is_a: ZFA:0000473 ! trunk musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001328 @@ -15605,9 +15608,9 @@ synonym: "neural segment" EXACT [] synonym: "neuromeres" EXACT PLURAL [] xref: TAO:0001328 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001329 @@ -15617,9 +15620,9 @@ def: "The layer within the retina where the bipolar cells synapse with the dendr synonym: "inner plexiform layer" EXACT [] xref: TAO:0001329 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001330 @@ -15629,9 +15632,9 @@ def: "The layer within the retina where the bipolar cells synapse with the photo synonym: "retinal outer plexiform layers" EXACT PLURAL [] xref: TAO:0001330 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001331 @@ -15642,9 +15645,9 @@ synonym: "external limiting membrane" EXACT [] synonym: "outer limiting membranes" EXACT PLURAL [] xref: TAO:0001331 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001332 @@ -15655,9 +15658,9 @@ synonym: "spinal neuromeres" EXACT PLURAL [] xref: TAO:0001332 is_a: ZFA:0001328 ! neuromere is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001333 @@ -15673,8 +15676,8 @@ def: "Presumptive structure fated to become enteric nervous system. Develops fr xref: TAO:0001334 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0000818 ! vagal neural crest -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001335 @@ -15684,9 +15687,9 @@ def: "Supradorsals are small paired nodules of cartilage positioned at the dista synonym: "supradorsals" EXACT PLURAL [] xref: TAO:0001335 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001336 @@ -15696,9 +15699,9 @@ def: "Neural spines are extensions of neural arches dorsal to the neural canal i synonym: "neural spines" EXACT PLURAL [] xref: TAO:0001336 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001338 @@ -15707,10 +15710,10 @@ namespace: zebrafish_anatomy def: "Folded tube that has parts intestinal bulb, mid intestine and posterior intestine. The intestine is where digestion and nutrient absorption occurs." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-050120-6] xref: TAO:0001338 is_a: ZFA:0001490 ! cavitated compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001339 @@ -15720,8 +15723,8 @@ def: "Telencephalic nucleus from which the axons of the anterior commissure orig synonym: "ntAC" EXACT [] xref: TAO:0001339 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001340 @@ -15731,8 +15734,8 @@ def: "The nucleus containing the cell bodies of neurons whose axons form the pos synonym: "ntPOC" EXACT [] xref: TAO:0001340 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001341 @@ -15743,9 +15746,9 @@ synonym: "IZ" EXACT [] xref: TAO:0001341 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0001342 ! presumptive intervening zone -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001342 @@ -15754,9 +15757,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the intervening zone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001342 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001343 @@ -15765,9 +15768,9 @@ namespace: zebrafish_anatomy def: "Boundary between the telencephalon and diencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001343 is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001344 @@ -15777,9 +15780,9 @@ def: "The border between the dorsal and ventral thalamus." [GOC:mh, ORCiD:0000-0 synonym: "zli" EXACT [] xref: TAO:0001344 is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001215 ! thalamus -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001345 @@ -15789,9 +15792,9 @@ def: "An bilobed multi-tissue structure lateral to the notochord composed of an xref: TAO:0001345 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001346 ! interrenal primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000669 ! head kidney -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001346 @@ -15801,9 +15804,9 @@ def: "Multi-tissue structure located in the kidney that develops into the interr xref: TAO:0001346 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001206 ! intermediate mesoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001347 @@ -15814,9 +15817,9 @@ synonym: "SFGS" RELATED [] synonym: "strata fibrosum et griseum superficiales" EXACT PLURAL [] xref: TAO:0001347 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001348 @@ -15827,9 +15830,9 @@ synonym: "strata marginale" EXACT PLURAL [] synonym: "stratum fibrosum marginale" EXACT [ZFIN:ZDB-PUB-180207-5] xref: TAO:0001348 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001349 @@ -15839,9 +15842,9 @@ def: "Portion of tissue that is the most superficial layer of the tectal neuropi synonym: "strata opticum" EXACT PLURAL [] xref: TAO:0001349 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001350 @@ -15849,9 +15852,9 @@ name: stratum griseum centrale namespace: zebrafish_anatomy xref: TAO:0001350 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001351 @@ -15861,9 +15864,9 @@ def: "Has hypothalamic inputs." [ZFIN:ZDB-PUB-180207-5] synonym: "strata album centrales" EXACT PLURAL [] xref: TAO:0001351 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001355 @@ -15875,9 +15878,9 @@ synonym: "meninx primitiva" EXACT [] xref: TAO:0001355 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000045 ! neural crest -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001356 @@ -15887,8 +15890,8 @@ def: "The terminal nerve, located anterior to cranial nerve I, is comprised of a synonym: "nervus terminalis" EXACT [] xref: TAO:0001356 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001357 @@ -15897,9 +15900,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is ventrolateral to the roof plate and part of the midbrain." [ISBN:0444517383, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001357 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001358 @@ -15908,10 +15911,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the diencephalic region." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001358 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001359 @@ -15919,9 +15922,9 @@ name: pineal complex namespace: zebrafish_anatomy xref: TAO:0001359 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001360 @@ -15930,9 +15933,9 @@ namespace: zebrafish_anatomy def: "An unpaired left-sided accessory organ which plays a role in establishing lateral brain left right asymmetry." [ZFIN:ZDB-PUB-030206-1] xref: TAO:0001360 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001361 @@ -15942,8 +15945,8 @@ def: "Basiventrals are bilaterally paired cartilages lateral to the notochord wh synonym: "arcualia" RELATED [] xref: TAO:0001361 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001362 @@ -15956,9 +15959,9 @@ synonym: "transverse process" EXACT [] xref: TAO:0001362 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001361 ! basiventral -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001363 @@ -15969,9 +15972,9 @@ def: "The neural complex is the collective term for the ossified supraneurals (S synonym: "Weberian supraneural" EXACT [] xref: TAO:0001363 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001364 @@ -15981,9 +15984,9 @@ def: "Hemal spines are extensions of hemal arches in the ventral skeletogenous s synonym: "haemal spine" EXACT [] xref: TAO:0001364 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000519 ! hemal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001365 @@ -15993,9 +15996,9 @@ synonym: "motor nucleus V" EXACT [] synonym: "nV" EXACT [] xref: TAO:0001365 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001366 @@ -16005,9 +16008,9 @@ def: "Tract that extends from the postoptic commissure through a curved trajecto synonym: "TPOC" EXACT [] xref: TAO:0001366 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000059 ! postoptic commissure -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001367 @@ -16018,9 +16021,9 @@ synonym: "diencephalic-mesencephalic boundary" EXACT [] xref: TAO:0001367 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007040 ! forebrain midbrain boundary neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001368 @@ -16029,10 +16032,10 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the forebrain midbrain boundary." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001368 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001369 @@ -16046,8 +16049,8 @@ synonym: "ventral pancreatic anlage" EXACT [] xref: TAO:0001369 is_a: ZFA:0001390 ! pancreatic bud relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0001370 @@ -16060,8 +16063,8 @@ synonym: "dorsal pancreatic anlage" EXACT [] synonym: "dorsal posterior bud" RELATED [ZFIN:ZDB-PUB-030902-16] xref: TAO:0001370 is_a: ZFA:0001390 ! pancreatic bud -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001371 @@ -16070,10 +16073,10 @@ namespace: zebrafish_anatomy def: "System responsible for the production and movement of pancreatic hormones and enzymes." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001371 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001372 @@ -16083,9 +16086,9 @@ def: "Duct that collects and carries secretions of the exocrine pancreas." [GOC: xref: TAO:0001372 is_a: ZFA:0005162 ! digestive system duct relationship: develops_from ZFA:0001369 ! anterior pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0001373 @@ -16097,9 +16100,9 @@ synonym: "migratory slow muscle precursor cells" EXACT PLURAL [] xref: TAO:0001373 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000003 ! adaxial cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001374 @@ -16108,10 +16111,10 @@ namespace: zebrafish_anatomy def: "Myocardium of the heart atrium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001374 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001375 @@ -16122,10 +16125,10 @@ synonym: "bulboventricular valve" EXACT [] xref: TAO:0001375 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001376 @@ -16136,8 +16139,8 @@ def: "Presumptive structure at the animal poll of the blastula that will develop synonym: "presumptive epidermis" EXACT [] xref: TAO:0001376 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0001377 @@ -16146,8 +16149,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become mesoderm. Determined by fate mapping." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001377 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000021 ! gastrula:90%-epiboly +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0001378 @@ -16157,9 +16160,9 @@ def: "Region of the hypoblast that is located along the rostral-caudal axis of t xref: TAO:0001378 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000071 ! shield -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000117 ! hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001379 @@ -16167,9 +16170,9 @@ name: pharyngeal ectoderm namespace: zebrafish_anatomy xref: TAO:0001379 is_a: ZFA:0000016 ! ectoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001381 @@ -16180,9 +16183,9 @@ synonym: "hypohyals" EXACT PLURAL [] xref: TAO:0001381 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001382 @@ -16192,9 +16195,9 @@ def: "Epibranchials 1-3 in adults are compound elements formed by the fusion of synonym: "epibranchial uncinate processes" EXACT PLURAL [] xref: TAO:0001382 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000658 ! epibranchial bone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001383 @@ -16204,8 +16207,8 @@ def: "Surface structure that develops into a paired fin." [GOC:mh, ORCiD:0000-00 synonym: "fin buds" EXACT PLURAL [] xref: TAO:0001383 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000042 ! juvenile:days 30-44 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001384 @@ -16216,8 +16219,8 @@ synonym: "pelvic fin buds" EXACT PLURAL [] xref: TAO:0001384 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001454 ! pelvic fin field -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000042 ! juvenile:days 30-44 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001385 @@ -16227,9 +16230,9 @@ def: "Apical ectodermal ridge that is part of the pelvic fin bud." [GOC:cvs, ORC synonym: "apical ectodermal ridge pelvic fin buds" EXACT PLURAL [] xref: TAO:0001385 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001386 @@ -16239,9 +16242,9 @@ def: "Mesoderm part of pelvic fin bud." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "mesoderm pelvic fin buds" EXACT PLURAL [] xref: TAO:0001386 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001387 @@ -16250,9 +16253,9 @@ namespace: zebrafish_anatomy def: "Skeleton that supports the pelvic fin. The skeleton consists of consists of supporting endochondral radials and dermal fin rays or lepidotrichia." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001387 is_a: ZFA:0000027 ! paired fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001388 @@ -16261,9 +16264,9 @@ namespace: zebrafish_anatomy synonym: "epithelial mesenchymal boundarys" EXACT PLURAL [] xref: TAO:0001388 is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001269 ! regenerating fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001389 @@ -16275,9 +16278,9 @@ synonym: "wound epidermis" EXACT [] synonym: "wound epithelium" EXACT [] xref: TAO:0001389 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001269 ! regenerating fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001390 @@ -16288,9 +16291,9 @@ synonym: "pancreatic buds" EXACT PLURAL [] xref: TAO:0001390 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000254 ! pancreas primordium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001391 @@ -16300,8 +16303,8 @@ def: "The anterior lateral line ganglia develops from cranial ectodermal placode synonym: "anterior lateral line ganglia" EXACT PLURAL [] xref: TAO:0001391 is_a: ZFA:0000120 ! lateral line ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001392 @@ -16312,9 +16315,9 @@ synonym: "basipophysis 1" EXACT [] synonym: "lateral process 1" EXACT [] xref: TAO:0001392 is_a: ZFA:0001362 ! parapophysis -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001167 ! vertebra 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001393 @@ -16325,9 +16328,9 @@ synonym: "basipophysis" EXACT [] synonym: "lateral process 2" EXACT [] xref: TAO:0001393 is_a: ZFA:0001362 ! parapophysis -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001168 ! vertebra 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001394 @@ -16336,9 +16339,9 @@ namespace: zebrafish_anatomy def: "Neural arch 3 is expanded and fused to supraneural 3 as part of a neural complex roofing and protecting the neural canal." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001394 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001169 ! vertebra 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001395 @@ -16347,9 +16350,9 @@ namespace: zebrafish_anatomy def: "Neural arch 4 is expanded and fused to supraneural 3 as part of the neural complex. A reduced neural spine projects from the posterior margin of the neural complex." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001395 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001170 ! vertebra 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001396 @@ -16358,9 +16361,9 @@ namespace: zebrafish_anatomy def: "The parapophysis + rib, fused to the centrum, extends laterally then angles anteroventrally. A thin plate, the os suspensorium fuses to its median surface." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001396 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001170 ! vertebra 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001397 @@ -16370,8 +16373,8 @@ def: "Posterior to the Weberian apparatus, otophysan supraneurals form as median synonym: "post-Weberian supraneurals" EXACT PLURAL [] xref: TAO:0001397 is_a: ZFA:0000442 ! supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001399 @@ -16383,10 +16386,10 @@ synonym: "pterygoquadrate" EXACT [] synonym: "quadrate cartilage" EXACT [] xref: TAO:0001399 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0007117 ! Meckel's cartilage-palatoquadrate cartilage joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001400 @@ -16395,10 +16398,10 @@ namespace: zebrafish_anatomy def: "Pharyngeal arch cartilage that is bilaterally paired and the largest cartilaginous component of the ventral hyoid arch." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001400 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005885 ! operculohyoid ligament relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001401 @@ -16407,10 +16410,10 @@ namespace: zebrafish_anatomy synonym: "dorsal visceral arch 2" EXACT [] xref: TAO:0001401 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000444 ! suspensorium relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001402 @@ -16419,9 +16422,9 @@ namespace: zebrafish_anatomy synonym: "ventral visceral arch 2" EXACT [] xref: TAO:0001402 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001403 @@ -16431,10 +16434,10 @@ def: "Dermal bone that first appears as paired ossifications in the membrane (de synonym: "supra-ethmoid" RELATED [] xref: TAO:0001403 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001404 @@ -16446,10 +16449,10 @@ synonym: "preethmoid bones" EXACT PLURAL [] xref: TAO:0001404 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001405 ! ethmoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001405 @@ -16459,10 +16462,10 @@ def: "Bilaterally paired neurocranium cartilage which is initially plate-like an synonym: "ethmoid plate" EXACT [] xref: TAO:0001405 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000042 ! juvenile:days 30-44 relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001406 @@ -16472,11 +16475,11 @@ def: "Small median unpaired dermal sesamoid bone in the premaxillary-ethmoid lig xref: TAO:0001406 is_a: ZFA:0001590 ! dermal bone relationship: develops_from ZFA:0000585 ! kinethmoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001407 @@ -16485,9 +16488,9 @@ namespace: zebrafish_anatomy def: "Plate like dermal bone, variable in size, though usually one of the smallest in the series. Bears 2-3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001407 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001408 @@ -16496,9 +16499,9 @@ namespace: zebrafish_anatomy def: "Plate like dermal bone, variable in size, but usually largest in the series. Usually fused with IO4 (eg. Opsariichthys, Nelson (1969)). Usually bears 3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001408 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001409 @@ -16507,9 +16510,9 @@ namespace: zebrafish_anatomy def: "Plate like dermal bone. Usually fused with infraorbital 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001409 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001410 @@ -16518,9 +16521,9 @@ namespace: zebrafish_anatomy def: "Anatomical cluster that is a anteriolateral part of the cranium and structurally supports the eye." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001410 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001411 @@ -16532,10 +16535,10 @@ synonym: "sclerotic bones" EXACT PLURAL [] xref: TAO:0001411 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001509 ! sclerotic cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001412 @@ -16547,13 +16550,13 @@ synonym: "epioccipital" EXACT [] xref: TAO:0001412 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001500 ! auditory capsule -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005889 ! epiotic-posttemporal joint relationship: overlaps ZFA:0005891 ! epiotic-parietal joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001414 @@ -16563,9 +16566,9 @@ def: "Anatomical cluster that is located in the posterior region of the cranium synonym: "basicranial region" EXACT [] xref: TAO:0001414 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001415 @@ -16576,8 +16579,8 @@ synonym: "pelvic radials 2" EXACT PLURAL [] xref: TAO:0001415 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001541 ! pelvic radial 2 cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001416 @@ -16588,8 +16591,8 @@ synonym: "pelvic radials 3" EXACT PLURAL [] xref: TAO:0001416 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001540 ! pelvic radial 3 cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001417 @@ -16600,8 +16603,8 @@ synonym: "pelvic radials 1" EXACT PLURAL [] xref: TAO:0001417 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001542 ! pelvic radial 1 cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001418 @@ -16612,9 +16615,9 @@ synonym: "dorsal fin lepidotrichia" EXACT PLURAL [] synonym: "dorsal fin ray" EXACT [] xref: TAO:0001418 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001124 ! dorsal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001419 @@ -16624,9 +16627,9 @@ def: "A range of seven to nine rod-like internal median skeletal support structu synonym: "dorsal fin support" EXACT [] xref: TAO:0001419 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001124 ! dorsal fin skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001420 @@ -16636,9 +16639,9 @@ def: "A range of twelve to fourteen rod-like internal median skeletal support st synonym: "anal fin radial" RELATED [] xref: TAO:0001420 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000167 ! anal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001421 @@ -16649,9 +16652,9 @@ synonym: "anal fin lepidotrichia" EXACT PLURAL [] synonym: "anal fin ray" EXACT [] xref: TAO:0001421 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000167 ! anal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001422 @@ -16661,9 +16664,9 @@ def: "Bilaterally paired large cartilage that articulates with the chondrocraniu synonym: "hyomandibular cartilage" EXACT [] xref: TAO:0001422 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001423 @@ -16673,11 +16676,11 @@ def: "Rod-shaped paired cartilages on either side of the notochord. They unite, synonym: "parachordal cartilages" EXACT PLURAL [] xref: TAO:0001423 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001424 @@ -16689,9 +16692,9 @@ synonym: "chondocranium" EXACT [] synonym: "neurocranium" RELATED [] xref: TAO:0001424 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001425 @@ -16700,10 +16703,10 @@ namespace: zebrafish_anatomy synonym: "basal plate cartilages" EXACT PLURAL [] xref: TAO:0001425 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001423 ! parachordal cartilage relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001426 @@ -16714,8 +16717,8 @@ synonym: "excurrent nostril" EXACT [ZFIN:ZDB-PUB-961014-399] synonym: "posterior nares" EXACT PLURAL [] xref: TAO:0001426 is_a: ZFA:0000550 ! naris -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001427 @@ -16726,8 +16729,8 @@ synonym: "anterior nares" EXACT PLURAL [] synonym: "incurrent nostril" EXACT [ZFIN:ZDB-PUB-961014-399] xref: TAO:0001427 is_a: ZFA:0000550 ! naris -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001428 @@ -16738,9 +16741,9 @@ comment: Olfactory epithelium may be part of olfactory rosette. \nThe epithelium synonym: "olfactory rosettes" EXACT PLURAL [] xref: TAO:0001428 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001429 @@ -16750,9 +16753,9 @@ def: "Ventral hindbrain nuclei just caudal to the interpeduncular nucleus." [ZFI synonym: "median raphe nucleus" EXACT [ZFIN:ZDB-PUB-100202-7] xref: TAO:0001429 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000241 ! midline column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001430 @@ -16762,8 +16765,8 @@ def: "A duct connecting the esophagus to the posterior chamber of the swim bladd xref: TAO:0001430 is_a: ZFA:0005171 ! duct relationship: continuous_with ZFA:0000204 ! esophagus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001431 @@ -16771,9 +16774,9 @@ name: primitive olfactory epithelium namespace: zebrafish_anatomy xref: TAO:0001431 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000048 ! olfactory placode -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001432 @@ -16783,8 +16786,8 @@ def: "Sclerotic bone that is located anterior to the eye." [GOC:mh, ORCiD:0000-0 synonym: "anterior sclerotic bones" EXACT PLURAL [] xref: TAO:0001432 is_a: ZFA:0001411 ! sclerotic bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001433 @@ -16794,8 +16797,8 @@ def: "Sclerotic bone that is located posterior to the eye." [GOC:mh, ORCiD:0000- synonym: "posterior sclerotic bones" EXACT PLURAL [] xref: TAO:0001433 is_a: ZFA:0001411 ! sclerotic bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001434 @@ -16805,10 +16808,10 @@ def: "Floor plate that is part of the neural tube." [GOC:mh, GOC:ymb, ORCiD:0000 xref: TAO:0001434 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000887 ! floor plate neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001435 @@ -16817,9 +16820,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue on the side of the lumen of the neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001435 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001436 @@ -16828,10 +16831,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001436 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001437 @@ -16840,9 +16843,9 @@ namespace: zebrafish_anatomy def: "The constriction between the anterior and posterior chambers of the swim bladder. There does not appear to be an identifiable sphincter in the ductus, and therefore other musculature may regulate its opening." [ZFIN:ZDB-PUB-060306-11] xref: TAO:0001437 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001438 @@ -16852,9 +16855,9 @@ def: "Anatomical space, part of the trunk that contains the pericardial and pleu synonym: "body cavity" EXACT [] xref: TAO:0001438 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001439 @@ -16865,9 +16868,9 @@ synonym: "anatomical systems" EXACT PLURAL [] xref: CARO:0000011 xref: TAO:0001439 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001440 @@ -16876,9 +16879,9 @@ namespace: zebrafish_anatomy def: "The interface between the dorsal neuroepithelium and the roof plate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001440 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001441 @@ -16887,7 +16890,7 @@ namespace: zebrafish_anatomy def: "Posterior portion of the rhombic lip contained within rhombomeres 2-8. Gives rise to several brainstem nuclei and choroid plexus." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001441 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0000822 ! rhombomere 2 @@ -16896,7 +16899,7 @@ relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001440 ! rhombic lip -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001442 @@ -16905,10 +16908,10 @@ namespace: zebrafish_anatomy def: "Anterior-most region of dorsal hindbrain within rhombomere 1, adjacent the midbrain-hindbrain boundary." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001442 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001440 ! rhombic lip -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001443 @@ -16917,9 +16920,9 @@ namespace: zebrafish_anatomy def: "A tuft of capillaries that project into the ventricles of the brain and secretes cerebral spinal fluid. The choroid plexus is covered by a cuboidal epithelium which maintains the integrity of the blood-brain barrier." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001443 is_a: ZFA:0000099 ! brain vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001444 @@ -16929,9 +16932,9 @@ def: "Choroid plexus that is part of the third ventricle." [GOC:cvs, ORCiD:0000- synonym: "diencephalic choroid plexus " EXACT [] xref: TAO:0001444 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001445 @@ -16941,9 +16944,9 @@ def: "Choroid plexus that is part of the tectal ventricle." [GOC:cvs, ORCiD:0000 synonym: "choroid plexus tectal ventricles" EXACT PLURAL [] xref: TAO:0001445 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000159 ! tectal ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001446 @@ -16952,9 +16955,9 @@ namespace: zebrafish_anatomy def: "Choroid plexus that is part of the fourth ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001446 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000110 ! fourth ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001447 @@ -16963,9 +16966,9 @@ namespace: zebrafish_anatomy def: "Choroid plexus that is part of the telencephalic ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001447 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000696 ! telencephalic ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001448 @@ -16975,9 +16978,9 @@ def: "Glands that produce calcitonin. In adult fish the glands lie as two group synonym: "ultimobranchial bodies" EXACT PLURAL [] xref: TAO:0001448 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001449 @@ -16988,9 +16991,9 @@ synonym: "mesenchyme pelvic fins" EXACT PLURAL [] xref: TAO:0001449 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0001386 ! mesoderm pelvic fin bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001450 @@ -17001,9 +17004,9 @@ synonym: "apical ectodermal ridge pelvic fins" EXACT PLURAL [] xref: TAO:0001450 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: develops_from ZFA:0001385 ! apical ectodermal ridge pelvic fin bud -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001451 @@ -17013,9 +17016,9 @@ def: "A small group of mesodermal cells located at the posterior margin of the d synonym: "ZPA" RELATED [] xref: TAO:0001451 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000789 ! mesoderm pectoral fin bud -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001452 @@ -17025,9 +17028,9 @@ def: "A small group of mesodermal cells located at the posterior margin of the d synonym: "ZPA" RELATED [] xref: TAO:0001452 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001386 ! mesoderm pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001453 @@ -17037,9 +17040,9 @@ def: "Embryonic region that develops into the pectoral fin bud." [GOC:mh, ORCiD: synonym: "pectoral fin fields" EXACT PLURAL [] xref: TAO:0001453 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001454 @@ -17049,9 +17052,9 @@ def: "Portion of tissue in the pelvic region that develops into the pelvic fin b synonym: "pelvic fin fields" EXACT PLURAL [] xref: TAO:0001454 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001455 @@ -17062,9 +17065,9 @@ synonym: "coraco-scapular cartilage" EXACT [] synonym: "scapulo-coracoid cartilage" EXACT [] xref: TAO:0001455 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001456 @@ -17074,8 +17077,8 @@ def: "A plate-like chondrogenic condensation within the pectoral fin, which subd synonym: "fin plate cartilage" EXACT [] xref: TAO:0001456 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001457 @@ -17085,9 +17088,9 @@ def: "Cartilage which is part of the axial skeleton." [GOC:mh, ORCiD:0000-0001-9 synonym: "postcranial axial cartilages" EXACT PLURAL [] xref: TAO:0001457 is_a: ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001458 @@ -17097,9 +17100,9 @@ def: "Cartilage which is part of the cranium." [GOC:mh, ORCiD:0000-0001-9114-873 synonym: "cranial cartilages" EXACT PLURAL [] xref: TAO:0001458 is_a: ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001459 @@ -17109,9 +17112,9 @@ def: "Cartilage which is part of the pelvic fin." [GOC:mh, ORCiD:0000-0001-9114- synonym: "pelvic fin cartilages" EXACT PLURAL [] xref: TAO:0001459 is_a: ZFA:0001543 ! paired fin cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001460 @@ -17121,9 +17124,9 @@ synonym: "pharyngeal arch cartilages" EXACT PLURAL [] synonym: "splanchnocranium cartilage" EXACT [] xref: TAO:0001460 is_a: ZFA:0001458 ! cranial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001461 @@ -17133,9 +17136,9 @@ def: "Cartilage that is part of the chondrocranium." [GOC:cvs, ORCiD:0000-0002-2 synonym: "neurocranium cartilage" EXACT [] xref: TAO:0001461 is_a: ZFA:0001458 ! cranial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001462 @@ -17146,9 +17149,9 @@ synonym: "somite border cell" EXACT PLURAL [] synonym: "somite boundary" RELATED [] xref: TAO:0001462 is_a: ZFA:0005594 ! anatomical surface -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001463 @@ -17158,9 +17161,9 @@ def: "Surface structure composed of an array of melanophores arranged in a strip synonym: "melanophore stripes" EXACT PLURAL [] xref: TAO:0001463 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001464 @@ -17170,9 +17173,9 @@ def: "The layer within the retina where the photoreceptor cell bodies reside." [ synonym: "retinal outer nuclear layers" EXACT PLURAL [] xref: TAO:0001464 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001465 @@ -17182,9 +17185,9 @@ def: "Layer of the retina composed of the inner segments of the photoreceptor ce synonym: "photoreceptor inner segment layers" EXACT PLURAL [] xref: TAO:0001465 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001466 @@ -17194,9 +17197,9 @@ def: "Layer of the retina composed of the outer segments of the photoreceptor ce synonym: "photoreceptor outer segment layers" EXACT PLURAL [] xref: TAO:0001466 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001467 @@ -17204,9 +17207,9 @@ name: pharyngeal mesoderm namespace: zebrafish_anatomy xref: TAO:0001467 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001468 @@ -17215,8 +17218,8 @@ namespace: zebrafish_anatomy def: "The anterior lateral line system develops from cranial ectodermal placodes, situated between the eye and the ear, that give rise to both the neuromasts and the anterior lateral line sensory nerves that innervate the neuromasts. The anterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians and are innervated by several lateral line nerves, which project to the hindbrain. The anterior lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001468 is_a: ZFA:0000034 ! lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001469 @@ -17226,9 +17229,9 @@ def: "The lateral line consists of small sensory patches (neuromasts) located su synonym: "lateral lines" EXACT PLURAL [] xref: TAO:0001469 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001470 @@ -17239,9 +17242,9 @@ synonym: "anterior lateral lines" EXACT PLURAL [] xref: TAO:0001470 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005117 ! anterior lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001471 @@ -17250,8 +17253,8 @@ namespace: zebrafish_anatomy def: "The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001471 is_a: ZFA:0000034 ! lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001472 @@ -17261,9 +17264,9 @@ def: "Neuromast that is part of the anterior lateral line. (Also see Anatomical synonym: "neuromast anterior" EXACT [] xref: TAO:0001472 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001473 @@ -17274,8 +17277,8 @@ subset: cell_slim synonym: "deep blastomeres" EXACT PLURAL [] xref: TAO:0001473 is_a: ZFA:0000093 ! blastomere -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000007 ! Cleavage:64-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000007 ! cleavage:64-cell [Term] id: ZFA:0001474 @@ -17303,8 +17306,8 @@ def: "Anatomical structure, that consists of similar cells and intercellular mat xref: CARO:0000043 xref: TAO:0001477 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000012 ! Blastula:High +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001478 @@ -17314,8 +17317,8 @@ def: "Anatomical group that has its parts adjacent to one another." [GOC:mh, ORC xref: CARO:0000041 xref: TAO:0001478 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000012 ! Blastula:High +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001479 @@ -17325,9 +17328,9 @@ def: "Cranial nerves that carry afferent and efferent fibers for the lateral lin synonym: "lateral line nerves" EXACT PLURAL [] xref: TAO:0001479 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001480 @@ -17338,9 +17341,9 @@ synonym: "anterodorsal lateral line nerve" EXACT [] synonym: "dorsal anterior lateral line nerves" EXACT PLURAL [] xref: TAO:0001480 is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000425 ! anterior lateral line nerve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001481 @@ -17351,9 +17354,9 @@ synonym: "anteroventral lateral line nerve" EXACT [] synonym: "ventral anterior lateral line nerves" EXACT PLURAL [] xref: TAO:0001481 is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000425 ! anterior lateral line nerve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001482 @@ -17363,10 +17366,10 @@ def: "Nerve fibers originating from the middle lateral line ganglion. These fib synonym: "middle lateral line nerves" EXACT PLURAL [] xref: TAO:0001482 is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000175 ! posterior lateral line nerve relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001483 @@ -17376,9 +17379,9 @@ def: "The middle lateral line ganglion develops from a cranial ectodermal placod synonym: "middle lateral line ganglia" EXACT PLURAL [] xref: TAO:0001483 is_a: ZFA:0000120 ! lateral line ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001484 @@ -17389,8 +17392,8 @@ subset: cell_slim synonym: "superficial blastomeres" EXACT PLURAL [] xref: TAO:0001484 is_a: ZFA:0000093 ! blastomere -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000007 ! Cleavage:64-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000007 ! cleavage:64-cell [Term] id: ZFA:0001485 @@ -17401,8 +17404,8 @@ synonym: "basal laminae" EXACT PLURAL [] xref: CARO:0000065 xref: TAO:0001485 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001486 @@ -17412,8 +17415,8 @@ def: "Portion of tissue, that consists of one or more layers of epithelial cells xref: CARO:0000066 xref: TAO:0001486 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001487 @@ -17423,9 +17426,9 @@ def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; xref: CARO:0000004 xref: TAO:0001487 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001488 @@ -17436,8 +17439,8 @@ synonym: "multi-tissue structures" EXACT PLURAL [] xref: CARO:0000055 xref: TAO:0001488 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001489 @@ -17448,8 +17451,8 @@ synonym: "compound organ components" EXACT PLURAL [] xref: CARO:0000019 xref: TAO:0001489 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001490 @@ -17460,8 +17463,8 @@ synonym: "cavitated compound organs" EXACT PLURAL [] xref: CARO:0000072 xref: TAO:0001490 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001491 @@ -17472,8 +17475,8 @@ synonym: "solid compound organs" EXACT PLURAL [] xref: CARO:0000074 xref: TAO:0001491 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001492 @@ -17484,8 +17487,8 @@ synonym: "simple organs" EXACT PLURAL [] xref: CARO:0000021 xref: TAO:0001492 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001493 @@ -17496,8 +17499,8 @@ synonym: "atypical epithelia" EXACT PLURAL [] xref: CARO:0000071 xref: TAO:0001493 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001494 @@ -17507,8 +17510,8 @@ def: "Epithelium that consists of more than one layer of epithelial cells." [GOC xref: CARO:0000069 xref: TAO:0001494 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001495 @@ -17519,8 +17522,8 @@ synonym: "unilaminar epithelia" EXACT PLURAL [] xref: CARO:0000073 xref: TAO:0001495 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001496 @@ -17531,8 +17534,8 @@ synonym: "simple columnar epithelia" EXACT PLURAL [] xref: CARO:0000068 xref: TAO:0001496 is_a: ZFA:0001495 ! unilaminar epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001497 @@ -17543,8 +17546,8 @@ synonym: "simple cuboidal epithelia" EXACT PLURAL [] xref: CARO:0000067 xref: TAO:0001497 is_a: ZFA:0001495 ! unilaminar epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001498 @@ -17555,8 +17558,8 @@ synonym: "simple squamous epithelia" EXACT PLURAL [] xref: CARO:0000070 xref: TAO:0001498 is_a: ZFA:0001495 ! unilaminar epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001499 @@ -17565,10 +17568,10 @@ namespace: zebrafish_anatomy def: "Simple columnar epithelium that lines the esophagus." [ZFIN:ZDB-PUB-070426-1] xref: TAO:0001499 is_a: ZFA:0001496 ! simple columnar epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000204 ! esophagus relationship: part_of ZFA:0005123 ! gut epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001500 @@ -17578,9 +17581,9 @@ def: "Bilaterally paired cartilage encasing the semicircular canals of the inner synonym: "otic capsule" EXACT [] xref: TAO:0001500 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001501 @@ -17591,8 +17594,8 @@ synonym: "cartilages" EXACT PLURAL [] xref: TAO:0001501 xref: VSAO:0000000 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001502 @@ -17601,9 +17604,9 @@ namespace: zebrafish_anatomy def: "Bilaterally paired medial bar of cartilage formed at midorbit through medial chondrification from triangles of cartilage that later form the junction of the taeniae marginales anterior, taeniae marginales posterior and the epiphyseal bar." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001502 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001503 @@ -17613,9 +17616,9 @@ def: "Cranial cartilage which is bilaterally paired and develops as a dorsal pla synonym: "laminas orbitonasalis" EXACT PLURAL [] xref: TAO:0001503 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001504 @@ -17625,9 +17628,9 @@ def: "Cranial cartilage which is a paired anterodorsal projection of the posteri synonym: "occipital arch cartilages" EXACT PLURAL [] xref: TAO:0001504 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001505 @@ -17638,10 +17641,10 @@ synonym: "orbital cartilage" RELATED [] synonym: "taeniae marginales anterior" EXACT PLURAL [] xref: TAO:0001505 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001506 @@ -17650,9 +17653,9 @@ namespace: zebrafish_anatomy def: "Unpaired thin dorsal sheet of cartilage that partially covers the posterior chondrocranium." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001506 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001507 @@ -17662,10 +17665,10 @@ def: "Paired thin medially aligned bar of cartilage that extends from the anteri synonym: "trabeculae cranii" EXACT PLURAL [] xref: TAO:0001507 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001321 ! neurocranial trabecula relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001508 @@ -17675,10 +17678,10 @@ def: "Cartilage formed via medial fusion between bilaterally paired trabecula cr synonym: "trabecular bar" EXACT [] xref: TAO:0001508 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001321 ! neurocranial trabecula relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001509 @@ -17689,8 +17692,8 @@ synonym: "scleral cartilage" RELATED [] synonym: "sclerotic cartilages" EXACT PLURAL [] xref: TAO:0001509 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001510 @@ -17700,9 +17703,9 @@ def: "Pharyngeal arch cartilage that is median and is the anterior-most cartilag synonym: "basihyal" RELATED [] xref: TAO:0001510 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001511 @@ -17714,9 +17717,9 @@ synonym: "interhyal bone" EXACT [] synonym: "stylohyal" EXACT [] xref: TAO:0001511 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001512 @@ -17727,8 +17730,8 @@ def: "Anatomical structure consisting of at least two non-overlapping organs, mu xref: CARO:0000054 xref: TAO:0001512 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001513 @@ -17739,8 +17742,8 @@ synonym: "dermomyotomes" EXACT PLURAL [] xref: TAO:0001513 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000155 ! somite -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001514 @@ -17751,8 +17754,8 @@ synonym: "bones" EXACT PLURAL [] xref: TAO:0001514 xref: VSAO:0000057 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001515 @@ -17763,10 +17766,10 @@ synonym: "orbital cartilage" RELATED [] synonym: "taeniae marginales posterior" EXACT PLURAL [] xref: TAO:0001515 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001516 @@ -17776,9 +17779,9 @@ def: "Pharyngeal arch cartilage that forms the largest skeletal element of the v synonym: "ceratobranchial cartilages" EXACT PLURAL [] xref: TAO:0001516 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001517 @@ -17787,9 +17790,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001517 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001518 @@ -17798,9 +17801,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001518 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001519 @@ -17809,9 +17812,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001519 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001520 @@ -17820,9 +17823,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that forms between hypobranchial 1 and epibranchial 1." [TAO:curator] xref: TAO:0001520 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001521 @@ -17831,9 +17834,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is the most posterior, bilaterally paired ventral pharyngeal arch cartilage." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001521 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001522 @@ -17843,9 +17846,9 @@ def: "Small rod-like cartilage that forms between the median copulae and the cer synonym: "hypobranchial cartilages" EXACT PLURAL [] xref: TAO:0001522 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001523 @@ -17855,9 +17858,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 4; t synonym: "hypobranchial 4 cartilages" EXACT PLURAL [] xref: TAO:0001523 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001524 @@ -17867,9 +17870,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 1, l synonym: "hypobranchial 1 cartilages" EXACT PLURAL [] xref: TAO:0001524 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001525 @@ -17879,9 +17882,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 2, l synonym: "hypobranchial 2 cartilages" EXACT PLURAL [] xref: TAO:0001525 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001526 @@ -17891,9 +17894,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 3, l synonym: "hypobranchial 3 cartilages" EXACT PLURAL [] xref: TAO:0001526 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001527 @@ -17903,9 +17906,9 @@ def: "Pharyngeal arch cartilage that is bilaterally paired small rod-like cartil synonym: "epibranchial cartilages" EXACT PLURAL [] xref: TAO:0001527 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001528 @@ -17914,9 +17917,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone and the medial end of pharyngobranchial 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001528 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001529 @@ -17925,9 +17928,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone and the medial end of pharyngobranchial 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001529 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001530 @@ -17936,9 +17939,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone and the medial end of pharyngobranchial 2." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001530 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001531 @@ -17947,9 +17950,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone and the medial end of pharyngobranchial 4." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001531 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001532 @@ -17966,8 +17969,8 @@ def: "Paired cartilages that project medially from the medial tips of epibranchi synonym: "pharyngobranchial cartilages" EXACT PLURAL [] xref: TAO:0001533 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001534 @@ -17977,9 +17980,9 @@ def: "Paired elongate cartilages that lie posteromedial to epibranchial 2 and me synonym: "pharyngobranchial 3 cartilages" EXACT PLURAL [] xref: TAO:0001534 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001535 @@ -17988,8 +17991,8 @@ namespace: zebrafish_anatomy synonym: "median fin cartilages" EXACT PLURAL [] xref: TAO:0001535 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001536 @@ -17999,9 +18002,9 @@ def: "Paired disc-like cartilage lying medial to and between the medial tips of synonym: "pharyngobranchial 2 cartilages" EXACT PLURAL [] xref: TAO:0001536 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001537 @@ -18011,8 +18014,8 @@ def: "Cartilage that develops initially on the medial side of the coraco-scapula synonym: "mesocorocoid cartilages" EXACT PLURAL [] xref: TAO:0001537 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001538 @@ -18022,8 +18025,8 @@ def: "Small cartilage that forms at the posterior edge of the basipterygium." [G synonym: "pelvic radial cartilages" EXACT PLURAL [] xref: TAO:0001538 is_a: ZFA:0001459 ! pelvic fin cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001539 @@ -18033,8 +18036,8 @@ def: "Bilaterally paired small, rodlike cartilages on the ventral surface of the synonym: "basipterygium cartilages" EXACT PLURAL [] xref: TAO:0001539 is_a: ZFA:0001459 ! pelvic fin cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001540 @@ -18044,8 +18047,8 @@ def: "Small cartilage that forms at the posterior and medial edge of the basipte synonym: "pelvic radials 3 cartilages" EXACT PLURAL [] xref: TAO:0001540 is_a: ZFA:0001538 ! pelvic radial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001541 @@ -18055,8 +18058,8 @@ def: "Small cartilage with a long posterior process and a shorter lateral one th synonym: "pelvic radials 2 cartilages" EXACT PLURAL [] xref: TAO:0001541 is_a: ZFA:0001538 ! pelvic radial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001542 @@ -18066,8 +18069,8 @@ def: "Small cartilage that forms at the posterior and lateral edge of the basipt synonym: "pelvic radials 1 cartilages" EXACT PLURAL [] xref: TAO:0001542 is_a: ZFA:0001538 ! pelvic radial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001543 @@ -18077,9 +18080,9 @@ def: "Cartilage which is part of one of the paired fins." [GOC:mh, ORCiD:0000-00 synonym: "paired fin cartilages" EXACT PLURAL [] xref: TAO:0001543 is_a: ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000027 ! paired fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001544 @@ -18134,9 +18137,9 @@ synonym: "caudal fin lepidotrichia" EXACT PLURAL [] synonym: "caudal fin ray" EXACT [] xref: TAO:0001550 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001551 @@ -18147,9 +18150,9 @@ synonym: "pectoral fin lepidotrichia" EXACT PLURAL [] synonym: "pectoral fin ray" EXACT [] xref: TAO:0001551 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001552 @@ -18160,9 +18163,9 @@ synonym: "pelvic fin lepidotrichia" EXACT PLURAL [] synonym: "pelvic fin ray" EXACT [] xref: TAO:0001552 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001553 @@ -18181,8 +18184,8 @@ synonym: "fin ray" EXACT [] synonym: "lepidotrichia" EXACT PLURAL [] xref: TAO:0001554 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001555 @@ -18193,8 +18196,8 @@ synonym: "epibranchial ganglia" EXACT PLURAL [] xref: TAO:0001555 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001556 @@ -18204,9 +18207,9 @@ def: "Trunk ganglion which is part of a bilaterally paired set of sympathetic ga synonym: "paravertebral ganglion" EXACT [] xref: TAO:0001556 is_a: ZFA:0001573 ! trunk ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001557 @@ -18218,9 +18221,9 @@ synonym: "pronephric glomeruli" EXACT PLURAL [] synonym: "pronephric glomus " EXACT [] xref: TAO:0001557 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001558 @@ -18230,9 +18233,9 @@ def: "Bilaterally paired tubes connecting the pronephric glomeruli to the pronep synonym: "ciliated neck segment" EXACT [] xref: TAO:0001558 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001559 @@ -18240,9 +18243,9 @@ name: vertebral column namespace: zebrafish_anatomy xref: TAO:0001559 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001560 @@ -18251,8 +18254,8 @@ namespace: zebrafish_anatomy def: "Ventral most hypural of the caudal fin. Supports the lower lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001560 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001561 @@ -18261,8 +18264,8 @@ namespace: zebrafish_anatomy def: "Hypural of the caudal fin dorsal to hypural 1. Supports the lower lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001561 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0001562 @@ -18271,8 +18274,8 @@ namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 2 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001562 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001563 @@ -18281,8 +18284,8 @@ namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 3 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001563 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001564 @@ -18291,8 +18294,8 @@ namespace: zebrafish_anatomy def: "Dorsal-most hypural, that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001564 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001565 @@ -18307,9 +18310,9 @@ synonym: "previtellogenic oocyte" RELATED [ZFIN:ZDB-PUB-140513-387] synonym: "Stage 2 oocyte" EXACT [] xref: TAO:0001565 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001265 ! ovarian follicle stage II -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001566 @@ -18324,9 +18327,9 @@ synonym: "Stage 3 oocyte" EXACT [] synonym: "vitellogenic oocytes" EXACT [] xref: TAO:0001566 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001266 ! ovarian follicle stage III -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001567 @@ -18341,9 +18344,9 @@ synonym: "primary oocyte" EXACT [] synonym: "Stage 1 oocyte" EXACT [] xref: TAO:0001567 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001263 ! ovarian follicle stage I -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001568 @@ -18358,9 +18361,9 @@ synonym: "postvitellogenic oocyte" RELATED [ZFIN:ZDB-PUB-140513-387] synonym: "Stage 4 oocyte" EXACT [] xref: TAO:0001568 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001264 ! ovarian follicle stage IV -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001569 @@ -18373,8 +18376,8 @@ synonym: "mature egg" EXACT [] synonym: "unactivated egg" EXACT [] xref: TAO:0001569 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001570 @@ -18389,8 +18392,8 @@ xref: CL:0000025 xref: TAO:0001570 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001569 ! oocyte stage V -relationship: end ZFS:0000001 ! Zygote:1-cell -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000001 ! zygote:1-cell +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001571 @@ -18400,8 +18403,8 @@ def: "A follicle that has undergone ovulation and no longer contains an oocyte." synonym: "postovulatory follicles" EXACT PLURAL [] xref: TAO:0001571 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001572 @@ -18412,9 +18415,9 @@ synonym: "SCG" RELATED [] synonym: "superior sympathetic cervical ganglion" EXACT [] xref: TAO:0001572 is_a: ZFA:0001573 ! trunk ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001573 @@ -18424,8 +18427,8 @@ def: "Ganglion which is located in the trunk." [GOC:mh, ORCiD:0000-0001-9114-873 synonym: "trunk ganglia" EXACT PLURAL [] xref: TAO:0001573 is_a: ZFA:0000190 ! ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001574 @@ -18435,8 +18438,8 @@ def: "Nervous system that innervates smooth muscle, cardiac muscle and glands. synonym: "ANS" EXACT [] xref: TAO:0001574 is_a: ZFA:0000396 ! nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001575 @@ -18445,8 +18448,8 @@ namespace: zebrafish_anatomy def: "Autonomic nervous system where the cell bodies lie in the brain and sacral region of the spinal cord. The neurons are mainly cholinergic." [GOC:GOC, GOC:ymb, ISBN:0080923437, ORCiD:0000-0002-9900-7880] xref: TAO:0001575 is_a: ZFA:0001574 ! autonomic nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001576 @@ -18455,8 +18458,8 @@ namespace: zebrafish_anatomy def: "Autonomic nervous system that originates beginning at the thoracic and lumbar areas of the spinal cord. Sympathetic neurons are primarily adrenergic producing the neurotransmitter noradrenalin along with other neuropeptides." [GOC:cvs, GOC:ymb, ISBN:0080923437, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001576 is_a: ZFA:0001574 ! autonomic nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001577 @@ -18466,9 +18469,9 @@ def: "Process of the premaxilla that extends posteriorly and overlays the meseth synonym: "premaxilla ascending processes" EXACT PLURAL [] xref: TAO:0001577 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000567 ! premaxilla -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001578 @@ -18478,9 +18481,9 @@ def: "In cypriniforms the anterior portion of the palatine has a dorsomedial pro synonym: "anterior dorsomedial process of autopalatines" EXACT PLURAL [] xref: TAO:0001578 is_a: ZFA:0001637 ! bony projection -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000620 ! autopalatine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001579 @@ -18489,9 +18492,9 @@ namespace: zebrafish_anatomy def: "Ural vertebra that is the second vertebra posterior to preural centrum 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001579 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001580 @@ -18501,9 +18504,9 @@ def: "Anatomical cluster that is the regional skeletal system surrounding the br synonym: "braincase" EXACT [] xref: TAO:0001580 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001581 @@ -18512,9 +18515,9 @@ namespace: zebrafish_anatomy def: "A vertebral centrum that is located immediately posterior to ural centrum 1. Ural centrum 2 is an unpaired median bone." [TAO:curator] xref: TAO:0001581 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001579 ! ural vertebra 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001582 @@ -18524,8 +18527,8 @@ def: "Precaudal vertebra that is not a Weberian vertebra. Vertebra 5 through 14 synonym: "non-Weberian precaudal vertebrae" EXACT PLURAL [] xref: TAO:0001582 is_a: ZFA:0000263 ! precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001583 @@ -18535,9 +18538,9 @@ def: "Vertebra which is the fused centra of preural 1 and ural 1. These elements synonym: "urostyle " RELATED [] xref: TAO:0001583 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001584 @@ -18548,8 +18551,8 @@ synonym: "caudal procurrent lepidotrichium" EXACT [] synonym: "caudal procurrent ray " RELATED [] xref: TAO:0001584 is_a: ZFA:0001550 ! caudal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001585 @@ -18560,8 +18563,8 @@ synonym: "caudal principal lepidotrichium" EXACT [] synonym: "caudal principal ray" EXACT [] xref: TAO:0001585 is_a: ZFA:0001550 ! caudal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001586 @@ -18572,9 +18575,9 @@ synonym: "pectoral fin radials" EXACT PLURAL [] xref: TAO:0001586 is_a: ZFA:0000271 ! radial relationship: develops_from ZFA:0001456 ! pectoral fin endoskeletal disc -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001587 @@ -18583,8 +18586,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin radial which develops from the pectoral fin endoskeletal disc, supports a few pectoral lepidotrichia or fin rays and connects the lepidotrichia and distal radials with the primary pectoral girdle (scapula and coracoid)." [TAO:curator] xref: TAO:0001587 is_a: ZFA:0001586 ! pectoral fin radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001588 @@ -18594,8 +18597,8 @@ def: "Pectoral fin radial, develops from the pectoral fin endoskeletal disc, and synonym: "pectoral fin distal radials" EXACT PLURAL [] xref: TAO:0001588 is_a: ZFA:0001586 ! pectoral fin radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001589 @@ -18605,8 +18608,8 @@ def: "The propterygium is the lateralmost or anteriormost basal cartilage that o synonym: "propterygia" EXACT PLURAL [] xref: TAO:0001589 is_a: ZFA:0001588 ! pectoral fin distal radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001590 @@ -18616,8 +18619,8 @@ def: "Intramembranous bone that forms superficially in the organism. Dermal bon synonym: "dermal bones" EXACT PLURAL [] xref: TAO:0001590 is_a: ZFA:0001635 ! intramembranous bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001591 @@ -18629,8 +18632,8 @@ xref: TAO:0001591 is_a: ZFA:0001693 ! chondral bone is_a: ZFA:0005620 ! endochondral element relationship: develops_from ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001592 @@ -18642,8 +18645,8 @@ is_a: ZFA:0000461 ! Weberian ossicle is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: develops_from ZFA:0000637 ! claustrum cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001593 @@ -18653,9 +18656,9 @@ def: "An endochondral bone that is the ventral, posteriorly-oriented bony extens synonym: "quadrate ventral processes" EXACT PLURAL [] xref: TAO:0000224 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000621 ! quadrate -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001594 @@ -18668,10 +18671,10 @@ synonym: "preopercle lower limb" EXACT [] synonym: "preopercle ventral arm" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0000289 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005631 ! preopercle horizontal limb-symplectic joint relationship: part_of ZFA:0000264 ! preopercle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001595 @@ -18684,10 +18687,10 @@ synonym: "preopercle upper limb" EXACT [] synonym: "preopercle vertical arm" EXACT [] xref: TAO:0000336 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005632 ! preopercle vertical limb-hyomandibula joint relationship: part_of ZFA:0000264 ! preopercle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001596 @@ -18697,9 +18700,9 @@ def: "Anatomical cluster which consists of two or more adjacent bones or cartila synonym: "joints" EXACT PLURAL [] xref: TAO:0000367 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000434 ! skeletal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001597 @@ -18709,10 +18712,10 @@ def: "Endochondral bone which is the posteroventral region of the exoccipital bo synonym: "exoccipitals posteroventral regions" EXACT PLURAL [] xref: TAO:0000348 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000661 ! exoccipital relationship: part_of ZFA:0001627 ! lagenar capsule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001598 @@ -18721,10 +18724,10 @@ namespace: zebrafish_anatomy def: "Endochondral bone which is the posterodorsal region of the basioccipital bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000337 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000472 ! basioccipital relationship: part_of ZFA:0001627 ! lagenar capsule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001599 @@ -18732,9 +18735,9 @@ name: os suspensorium medial flange namespace: zebrafish_anatomy xref: TAO:0002214 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001171 ! os suspensorium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001600 @@ -18743,8 +18746,8 @@ namespace: zebrafish_anatomy def: "Neural spine that is located on the fourth vertebra." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001546 is_a: ZFA:0001336 ! neural spine -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001601 @@ -18757,9 +18760,9 @@ synonym: "horizontal process" EXACT [] synonym: "manubrium incudus" EXACT [] xref: TAO:0001553 is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001602 @@ -18768,9 +18771,9 @@ namespace: zebrafish_anatomy def: "Bony process that develops as a dorsally projecting cartilaginous extension from the basidorsal. The ascending process is longer relative to the manubrium in larvae (5.1-11.0 mm). By 13.0 mm, the ascending process appears highly reduced in size." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001548 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001603 @@ -18780,9 +18783,9 @@ def: "Portion of the intercalarium that ossifies from the cartilage condensatio synonym: "articular process" RELATED [] xref: TAO:0001549 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001604 @@ -18792,9 +18795,9 @@ def: "Surface structure that is the dorsal portion of the caudal fin." [GOC:cvs, synonym: "caudal fin dorsal lobe" EXACT [] xref: TAO:0001593 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001605 @@ -18804,9 +18807,9 @@ def: "Surface structure that is the ventral portion of the caudal fin." [GOC:cvs synonym: "caudal fin ventral lobe" EXACT [] xref: TAO:0001594 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001606 @@ -18817,8 +18820,8 @@ synonym: "gill arch 1" EXACT [] synonym: "visceral arch 3" EXACT [] xref: TAO:0001598 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001607 @@ -18829,8 +18832,8 @@ synonym: "gill arch 2" EXACT [] synonym: "visceral arch 4" EXACT [] xref: TAO:0001599 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001608 @@ -18841,8 +18844,8 @@ synonym: "gill arch 3" EXACT [] synonym: "visceral arch 5" EXACT [] xref: TAO:0001600 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001609 @@ -18853,8 +18856,8 @@ synonym: "gill arch 4" EXACT [] synonym: "visceral arch 6" EXACT [] xref: TAO:0001601 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001610 @@ -18865,8 +18868,8 @@ synonym: "gill arch 5" EXACT [] synonym: "visceral arch 7" EXACT [] xref: TAO:0001602 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001611 @@ -18877,8 +18880,8 @@ synonym: "hyoid arch" EXACT [] synonym: "visceral arch 2" EXACT [] xref: TAO:0001596 is_a: ZFA:0001306 ! pharyngeal arch -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001612 @@ -18889,8 +18892,8 @@ synonym: "mandibular arch" EXACT [] synonym: "visceral arch 1" EXACT [] xref: TAO:0001595 is_a: ZFA:0001306 ! pharyngeal arch -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001613 @@ -18908,10 +18911,10 @@ synonym: "visceral arches 3-7" EXACT [] xref: TAO:0000625 xref: TAO:0001597 is_a: ZFA:0001306 ! pharyngeal arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001614 @@ -18920,9 +18923,9 @@ namespace: zebrafish_anatomy def: "Endocardium that is part of the atrium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002169 is_a: ZFA:0001320 ! endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001615 @@ -18931,9 +18934,9 @@ namespace: zebrafish_anatomy def: "Endocardium that is part of the cardiac ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002247 is_a: ZFA:0001320 ! endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001616 @@ -18942,9 +18945,9 @@ namespace: zebrafish_anatomy def: "Endocardium that is part of the atrioventricular canal." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002170 is_a: ZFA:0001320 ! endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001315 ! atrioventricular canal -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001617 @@ -18957,10 +18960,10 @@ synonym: "immature otoliths" RELATED PLURAL [] synonym: "statolith" EXACT [] xref: TAO:0001621 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000051 ! otic vesicle relationship: part_of ZFA:0000559 ! otolith organ -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001618 @@ -18977,9 +18980,9 @@ synonym: "nerve fiber layer" EXACT [] synonym: "optic fiber layers" EXACT PLURAL [] xref: TAO:0002212 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001620 @@ -18989,9 +18992,9 @@ def: "Most anterior portion of the pronephric duct (or tubule as described by Wi synonym: "PCT" EXACT [] xref: TAO:0002238 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001621 @@ -19001,9 +19004,9 @@ def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2 synonym: "proximal straight tubules" EXACT PLURAL [] xref: TAO:0002239 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001622 @@ -19013,9 +19016,9 @@ def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2 synonym: "pronephric distal early tubules" EXACT PLURAL [] xref: TAO:0002236 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001623 @@ -19025,9 +19028,9 @@ def: "Most posterior portion of the pronephric duct (or tubule as described by W synonym: "posterior pronephric ducts" EXACT PLURAL [] xref: TAO:0002225 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001624 @@ -19036,9 +19039,9 @@ namespace: zebrafish_anatomy def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the distal early tubule." [ZFIN:ZDB-PUB-071029-9] synonym: "distal late tubules" EXACT PLURAL [] is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001625 @@ -19048,9 +19051,9 @@ def: "Portion of cranial nerve II where large fascicles of axons from the optic synonym: "optic nerve heads" EXACT PLURAL [] xref: TAO:0002213 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000435 ! cranial nerve II -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001626 @@ -19060,8 +19063,8 @@ def: "Portion of organism substance that is a clear fluid that occupies the suba synonym: "CSF" EXACT [] xref: TAO:0002184 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001627 @@ -19071,8 +19074,8 @@ def: "Anatomical cluster that consists of a bulla formed by the exoccipital and synonym: "lagenar capsules" EXACT PLURAL [] xref: TAO:0001620 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001628 @@ -19083,8 +19086,8 @@ synonym: "replacement bones" EXACT PLURAL [] xref: TAO:0001637 is_a: ZFA:0001514 ! bone element is_a: ZFA:0005624 ! replacement element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001629 @@ -19094,8 +19097,8 @@ def: "Replacement bone that forms within the connective tissue surrounding the n synonym: "perichordal bones" EXACT PLURAL [] xref: TAO:0001639 is_a: ZFA:0001628 ! replacement bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001630 @@ -19106,8 +19109,8 @@ synonym: "perichondral bones" EXACT PLURAL [] xref: TAO:0001638 is_a: ZFA:0001693 ! chondral bone relationship: develops_from ZFA:0001634 ! perichondrium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001631 @@ -19117,8 +19120,8 @@ def: "Perichordal bone that surrounds the anterior tip of the notochord." [GOC:m xref: TAO:0001640 is_a: ZFA:0001629 ! perichordal bone relationship: develops_from ZFA:0001633 ! perichordal connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001632 @@ -19128,8 +19131,8 @@ def: "Portion of tissue that consists of mesodermally derived cells and intercel xref: TAO:0001641 xref: VSAO:0000017 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001633 @@ -19138,8 +19141,8 @@ namespace: zebrafish_anatomy def: "Portion of connective tissue which surrounds the notochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001642 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001634 @@ -19149,8 +19152,8 @@ def: "Portion of connective tissue which surrounds cartilage." [GOC:mh, ORCiD:00 synonym: "cartilage connective tissue" EXACT [] xref: TAO:0001643 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001635 @@ -19161,8 +19164,8 @@ synonym: "intramembranous bones" EXACT PLURAL [] xref: TAO:0001644 is_a: ZFA:0001514 ! bone element relationship: develops_from ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001636 @@ -19172,8 +19175,8 @@ def: "Intramembranous bone that forms deep in the organism." [GOC:mh, ORCiD:0000 synonym: "membrane bones" EXACT PLURAL [] xref: TAO:0001645 is_a: ZFA:0001635 ! intramembranous bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001637 @@ -19185,9 +19188,9 @@ synonym: "process" EXACT [TAO:0001834] xref: TAO:0001646 xref: TAO:0001834 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001514 ! bone element -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001638 @@ -19198,9 +19201,9 @@ synonym: "octaval nucleus" EXACT [] synonym: "vestibulocochlear nucleus" EXACT [] xref: TAO:0002243 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001639 @@ -19210,9 +19213,9 @@ def: "Simple squamous epithelium which lines blood and lymphatic vessels and the synonym: "endothelia" EXACT PLURAL [] xref: TAO:0002171 is_a: ZFA:0001498 ! simple squamous epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001640 @@ -19222,9 +19225,9 @@ def: "Ventral bend in the brain occurring caudal to the adenohypophyseal placode synonym: "ventral flexure" EXACT [] xref: TAO:0002181 is_a: ZFA:0005593 ! neuraxis flexure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001641 @@ -19233,9 +19236,9 @@ namespace: zebrafish_anatomy def: "Neural arch on the urostyle. It does not support a neural spine. Sanger and McCune 2002." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001666 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000158 ! urostyle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001642 @@ -19245,8 +19248,8 @@ def: "Anatomical cluster consisting of adjacent teeth constituting a row." [GOC: synonym: "tooth rows" EXACT PLURAL [] xref: TAO:0001667 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001643 @@ -19258,8 +19261,8 @@ synonym: "anatomical spaces" EXACT PLURAL [] xref: CARO:0000005 xref: TAO:0001668 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001644 @@ -19269,8 +19272,8 @@ def: "Cartilage of the lower jaw that give rise to a portion of the anguloarticu synonym: "articular cartilages" EXACT PLURAL [] xref: TAO:0001670 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001645 @@ -19280,8 +19283,8 @@ def: "Dermal bone that is located posterior to the dentary and lateral to the ar synonym: "angular bones" EXACT PLURAL [] xref: TAO:0001669 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001646 @@ -19292,8 +19295,8 @@ synonym: "anal fin pterygiophores" RELATED [] synonym: "anal fin radials" EXACT PLURAL [] xref: TAO:0001671 is_a: ZFA:0000271 ! radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001647 @@ -19304,8 +19307,8 @@ synonym: "dorsal fin pterygiophore " RELATED [] synonym: "dorsal fin radials" EXACT PLURAL [] xref: TAO:0001672 is_a: ZFA:0000271 ! radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001648 @@ -19314,8 +19317,8 @@ namespace: zebrafish_anatomy def: "Neural crest that migrates into the pharyngeal arches and heart, forming connective tissue that separates the vessels of the heart." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0002173 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001649 @@ -19325,8 +19328,8 @@ def: "Anatomical cluster that is the series of dermal bones associated with the synonym: "circumorbital series" EXACT [] xref: TAO:0001709 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001650 @@ -19335,8 +19338,8 @@ namespace: zebrafish_anatomy synonym: "gill mesenchyme" EXACT [] xref: TAO:0002172 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001651 @@ -19350,9 +19353,9 @@ synonym: "sternohyoids" EXACT [] xref: TAO:0000283 xref: TAO:0002200 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005923 ! anterior migratory muscle precursor stream -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001652 @@ -19363,9 +19366,9 @@ synonym: "cephalic muscle" EXACT [] synonym: "cranial muscle " RELATED [] xref: TAO:0002198 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000328 ! cephalic musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001653 @@ -19374,9 +19377,9 @@ namespace: zebrafish_anatomy def: "Muscle which is paired and runs anterio-posteriorly along the heart and is covered with epicardium." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-001026-2] xref: TAO:0002221 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001654 @@ -19385,9 +19388,9 @@ namespace: zebrafish_anatomy def: "Anatomical space which is located beneath the operculum and external to the gills." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002154 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001655 @@ -19397,10 +19400,10 @@ def: "Anatomical space in which the heart is located and is surrounded by the pe synonym: "thoracic cavity" EXACT [] xref: TAO:0002220 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001438 ! coelom relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001656 @@ -19412,10 +19415,10 @@ synonym: "coelomic cavity" RELATED [] synonym: "visceral cavity" EXACT [] xref: TAO:0002224 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001438 ! coelom relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001657 @@ -19425,9 +19428,9 @@ def: "CNS tract/commissure which extends between the telencephalon and diencepha synonym: "SOT" EXACT [] xref: TAO:0002244 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001658 @@ -19436,9 +19439,9 @@ namespace: zebrafish_anatomy def: "Nucleus located within the hindbrain." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002177 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001659 @@ -19448,9 +19451,9 @@ def: "Brain nucleus part of the diencephalon." [GOC:mh, ORCiD:0000-0001-9114-873 xref: TAO:0002191 is_a: ZFA:0001488 ! multi-tissue structure is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001660 @@ -19458,9 +19461,9 @@ name: telencephalic nucleus namespace: zebrafish_anatomy xref: TAO:0002178 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001662 @@ -19469,9 +19472,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located in the caudal tuberculum. The preglomerular nuclei make up most of the migrated nuclei within the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0002226 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001663 @@ -19480,9 +19483,9 @@ namespace: zebrafish_anatomy def: "The portion of tissue that is the initial segment of one of the cranial nerves leaving the central nervous system." [http://en.wikipedia.org/wiki/Nerve_root] xref: TAO:0002190 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000641 ! cranial nerve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001665 @@ -19491,9 +19494,9 @@ namespace: zebrafish_anatomy def: "Nucleus located in the midbrain." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002209 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001666 @@ -19502,9 +19505,9 @@ namespace: zebrafish_anatomy def: "Telencephalic nucleus which is in contact with the median ependymal lining of the ventricle and consists of the dorsal, ventral, supracommissural and postcommissural nuclei of the ventral telencephalon. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0002222 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000304 ! ventral telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001667 @@ -19513,9 +19516,9 @@ namespace: zebrafish_anatomy def: "Telencephalic nucleus which has migrated away from the ependyma and consists of the central, lateral nuclei and the dorsal and ventral entopeduncular nuclei. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0002179 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000304 ! ventral telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001668 @@ -19525,8 +19528,8 @@ def: "Peripheral nucleus of the ventral telencephalon which is located immediate synonym: "area ventralis telencephali, nucleus centralis" EXACT [] xref: TAO:0002180 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001669 @@ -19535,9 +19538,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located between the dorsal hypothalamus and the caudal tuberal nucleus and does not contain tyrosine hydroxylase immunoreactive cells." [ZFIN:ZDB-PUB-001220-2] xref: TAO:0002202 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001670 @@ -19546,10 +19549,10 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the part of the notochord located in the caudal fin." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001821 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000135 ! notochord relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001671 @@ -19558,9 +19561,9 @@ namespace: zebrafish_anatomy def: "Epithelium that is the primary epithelium of the developing inner ear and has anterior and posterior maculae as its parts. These maculae later move apart into distinct regions of epithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-383] xref: TAO:0002206 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001672 @@ -19570,10 +19573,10 @@ def: "Portion of tissue that grows in from the dorsolateral wall of the otic ves synonym: "dorsal bar" RELATED [] xref: TAO:0002193 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000262 ! posterior semicircular canal relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001673 @@ -19583,9 +19586,9 @@ def: "Podocyte that is part of the pronephros." [GOC:cvs, ORCiD:0000-0002-2244-7 subset: cell_slim xref: TAO:0002237 is_a: ZFA:0009285 ! podocyte -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001674 @@ -19595,9 +19598,9 @@ def: "Podocyte that is part of the kidney (mesonephros)." [GOC:cvs, ORCiD:0000-0 subset: cell_slim xref: TAO:0002208 is_a: ZFA:0009285 ! podocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001288 ! renal glomerulus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001675 @@ -19606,8 +19609,8 @@ namespace: zebrafish_anatomy def: "Portion of connective tissue that is a fibrous band connecting bones or cartilages or supporting an organ." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001682 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001676 @@ -19616,9 +19619,9 @@ namespace: zebrafish_anatomy def: "Ligament that is in the eye and is located at the angle between the cornea and the iris." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070629-16] xref: TAO:0002141 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001677 @@ -19627,9 +19630,9 @@ namespace: zebrafish_anatomy def: "Floor plate that is part of the midbrain." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002196 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001678 @@ -19639,8 +19642,8 @@ def: "Multi-tissue structure that consists of the structures that develop into t comment: Dbxref for ZFIN changed to match actual database accession number. Old Dbxref ZDB-ANAT-090226-1 correct Dbxref ZDB-ANAT-090227-5. xref: TAO:0002201 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001679 @@ -19655,9 +19658,9 @@ synonym: "presumptive lens" RELATED [] xref: TAO:0002205 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000122 ! lens placode -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001680 @@ -19666,8 +19669,8 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the preoptic area. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] xref: TAO:0002219 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-03-23T01:16:53Z @@ -19680,9 +19683,9 @@ synonym: "gray mater" RELATED [] synonym: "gray matter" EXACT [] xref: TAO:0002197 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-03-23T01:47:27Z @@ -19699,9 +19702,9 @@ xref: TAO:0000145 xref: TAO:0002142 xref: TAO:0002143 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Melissa Haendel creation_date: 2009-03-23T01:50:38Z @@ -19712,9 +19715,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue comprised of four to six layers of nonkeratinized, stratified squamous cells and represents approximately 60% of the thickness of the cornea." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002187 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:11:11Z @@ -19727,9 +19730,9 @@ synonym: "anterior elastic lamina" EXACT [] synonym: "anterior limiting membrane" RELATED [] xref: TAO:0002155 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Melissa Haendel creation_date: 2009-03-23T02:11:47Z @@ -19740,9 +19743,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is located basal to Bowman's layer and distal to Descemet's membrane and is comprised largely of connective tissue." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002189 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:16Z @@ -19754,9 +19757,9 @@ def: "Acellular anatomical structure composed of collagen, Descemet's membrane i synonym: "posterior limiting membrane" EXACT [] xref: TAO:0002157 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:32Z @@ -19767,9 +19770,9 @@ namespace: zebrafish_anatomy def: "Epithelium that is the innermost layer of the cornea and is comprised of a monolayer of polygonal cells." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002186 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:13:25Z @@ -19780,9 +19783,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002188 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-03-23T04:36:20Z @@ -19794,8 +19797,8 @@ def: "Non-material anatomical entity of one dimension, which forms a boundary of xref: CARO:0000008 xref: TAO:0001837 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell created_by: Melissa Haendel creation_date: 2009-04-30T02:46:34Z @@ -19806,8 +19809,8 @@ namespace: zebrafish_anatomy def: "Anatomical structure that delineates a furrow or depression in an organ or tissue." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001838 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell created_by: Melissa Haendel creation_date: 2009-04-30T02:48:53Z @@ -19820,10 +19823,10 @@ subset: cell_slim xref: CL:0001031 xref: TAO:0002182 is_a: ZFA:0009070 ! granule cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000358 ! granular layer corpus cerebelli relationship: part_of ZFA:0000766 ! granular layer valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-04-30T03:18:48Z @@ -19834,9 +19837,9 @@ namespace: zebrafish_anatomy def: "CNS white matter that crosses the midline within the hindbrain." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-090417-11] xref: TAO:0002199 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-06-18T12:33:21Z @@ -19846,8 +19849,8 @@ name: chondral bone namespace: zebrafish_anatomy def: "Replacement bone that forms within or surrounding a cartilaginous skeletal element." [GOC:mh, ORCiD:0000-0001-9114-8737] is_a: ZFA:0001628 ! replacement bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-07-29T11:34:33Z @@ -19860,9 +19863,9 @@ subset: cell_slim xref: CL:0000626 xref: TAO:0002211 is_a: ZFA:0009070 ! granule cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-04-30T03:21:40Z @@ -19874,8 +19877,8 @@ def: "Motor nucleus of vagal nerve that is located within the dorsolateral porti synonym: "dlX" EXACT [] xref: TAO:0002192 is_a: ZFA:0000387 ! motor nucleus of vagal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-08-04T10:42:49Z @@ -19887,8 +19890,8 @@ def: "Motor nucleus of vagal nerve that is located within the medial portion of synonym: "mmX" EXACT [] xref: TAO:0002207 is_a: ZFA:0000387 ! motor nucleus of vagal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Melissa Haendel creation_date: 2009-08-04T10:45:00Z @@ -19902,9 +19905,9 @@ synonym: "octaval nerve motor nuclei" EXACT PLURAL [] synonym: "OLe" EXACT [] xref: TAO:0002174 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:04:59Z @@ -19919,8 +19922,8 @@ synonym: "rostral cranial nerve VIII motor nucleus" EXACT [] synonym: "rostral efferent nuclei" RELATED PLURAL [ZFIN:ZDB-PUB-061229-17] xref: TAO:0002175 is_a: ZFA:0001697 ! octaval nerve motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:21:34Z @@ -19935,8 +19938,8 @@ synonym: "RELL" EXACT [] synonym: "rostral cranial nerve VIII motor nucleus" EXACT [] xref: TAO:0002176 is_a: ZFA:0001697 ! octaval nerve motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:24:26Z @@ -19947,9 +19950,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the external layer of the swim bladder that is covered by the peritoneum, and made of elastic fibres and ichthyocol (short needles of collagen)." [http://www.briancoad.com/Dictionary/T.htm] xref: TAO:0002245 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-05T12:54:11Z @@ -19960,9 +19963,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the internal layer of the swim bladder and is comprised of thin endoderm and a smooth muscle layer called the muscularis mucosa with longitudinal and circular fibres with some collagen." [http://www.briancoad.com/Dictionary/T.htm] xref: TAO:0002246 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-05T12:55:22Z @@ -19973,8 +19976,8 @@ namespace: zebrafish_anatomy def: "Proliferative region that is part of the developing fin fold or fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002146 is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-08-05T02:38:05Z @@ -19985,9 +19988,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is a thickening and reshaping of the epidermal basal stratum cells beneath which fibroblasts accumulate to form the scale primordium." [ZFIN:ZDB-PUB-081008-12] xref: TAO:0002195 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001180 ! epidermal basal stratum -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:22:18Z @@ -20000,9 +20003,9 @@ synonym: "scale placode" RELATED [] synonym: "scale primordia " EXACT PLURAL [] xref: TAO:0002242 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:35:05Z @@ -20013,9 +20016,9 @@ namespace: zebrafish_anatomy def: "Duct that is part of the inner ear and connects to the semicircular canals ending in the endolymphatic sac." [http://en.wikipedia.org/wiki/Endolymphatic_duct, ZFIN:ZDB-PUB-090112-20] xref: TAO:0002194 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-11T09:15:55Z @@ -20026,9 +20029,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the corpus cerebelli and contains Purkinje cells." [ZFIN:ZDB-PUB-090422-9] xref: TAO:0002240 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-11T09:41:06Z @@ -20039,9 +20042,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that has as its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain." [ISBN:3764351209] xref: TAO:0002156 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T01:39:24Z @@ -20053,9 +20056,9 @@ def: "CNS white matter that is part of the cerebellum." [GOC:mh, ORCiD:0000-0001 synonym: "cerebellar tracts/commissures" EXACT PLURAL [] xref: TAO:0002183 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T01:48:48Z @@ -20066,9 +20069,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the valvula cerebelli and contains Purkinje cells." [ZFIN:ZDB-PUB-090422-9] xref: TAO:0002241 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:00:08Z @@ -20080,10 +20083,10 @@ def: "Portion of tissue that consists of afferent axons from the spinal cord, se synonym: "mossy fibers" EXACT PLURAL [] xref: TAO:0002210 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:02:35Z @@ -20095,10 +20098,10 @@ def: "Portion of tissue that consists of afferent axons from the inferior olive synonym: "climbing fibers" EXACT PLURAL [] xref: TAO:0002185 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:18:48Z @@ -20110,9 +20113,9 @@ def: "Portion of tissue that is part of the heart tube and will become the bulbu xref: TAO:0002230 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000818 ! vagal neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:25:06Z @@ -20124,10 +20127,10 @@ def: "Portion of tissue that consists of axons of cerebellar granule cells that synonym: "parallel fibers" EXACT PLURAL [] xref: TAO:0002218 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000394 ! molecular layer corpus cerebelli relationship: part_of ZFA:0000913 ! molecular layer valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T04:32:51Z @@ -20138,8 +20141,8 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become ventral mesoderm. Determined by fate mapping." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002235 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere created_by: Melissa Haendel creation_date: 2009-08-24T11:02:45Z @@ -20150,9 +20153,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue within the otic vesicle that consists of a thin layer of otic epithelium covering a finger-shaped core of acellular matrix." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-090330-11] xref: TAO:0002215 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000051 ! otic vesicle -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Melissa Haendel creation_date: 2009-08-25T10:45:23Z @@ -20163,8 +20166,8 @@ namespace: zebrafish_anatomy def: "Otic vesicle protrusion that is initially ventrally located and then fuses with the lateral protrusion, giving rise to the pillar of the lateral semicircular canal." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-090330-11] xref: TAO:0002216 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000035 ! Larval:Protruding-mouth -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000035 ! larval:protruding-mouth +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-08-25T10:53:24Z @@ -20175,9 +20178,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue around which the semicircular canals flow." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-383] xref: TAO:0002223 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000431 ! semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Melissa Haendel creation_date: 2009-08-25T10:57:52Z @@ -20189,9 +20192,9 @@ def: "Multi-tissue structure that is part of the heart tube and will become the xref: TAO:0002228 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001721 ! presumptive atrium primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:20:59Z @@ -20204,9 +20207,9 @@ xref: TAO:0002231 xref: ZFA:0002231 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001720 ! presumptive cardiac ventricle primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:21:18Z @@ -20217,9 +20220,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac ventricle." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002232 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:23Z @@ -20230,9 +20233,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac atrium." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002229 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:28Z @@ -20243,9 +20246,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the sinus venosus." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002234 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:40:57Z @@ -20256,9 +20259,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the atrioventricular canal." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002227 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Melissa Haendel creation_date: 2009-08-31T11:57:36Z @@ -20269,9 +20272,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the endocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002233 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T01:21:44Z @@ -20285,9 +20288,9 @@ subset: cell_slim xref: CL:0002377 xref: TAO:0002203 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Melissa Haendel creation_date: 2009-09-08T02:10:35Z @@ -20299,9 +20302,9 @@ def: "Artery that extends horizontally across the brain midline which is fed by synonym: "BCA" EXACT [] xref: TAO:0005000 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005001 @@ -20314,8 +20317,8 @@ synonym: "PCS" EXACT [] synonym: "posterior communicating segment of the basilar artery" EXACT [] xref: TAO:0005001 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005002 @@ -20325,9 +20328,9 @@ def: "Artery that runs along the ventral keel of the hindbrain. It lies between synonym: "BA" EXACT [] xref: TAO:0005002 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005003 @@ -20338,10 +20341,10 @@ synonym: "branchial basket" RELATED [] synonym: "branchial vasculature" EXACT [] xref: TAO:0005003 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature relationship: part_of ZFA:0001306 ! pharyngeal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005004 @@ -20352,9 +20355,9 @@ synonym: "aortic arches" EXACT PLURAL [] synonym: "branchial aortic arches " EXACT PLURAL [ZFIN:ZDB-PUB-080512-6] xref: TAO:0005004 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005005 @@ -20365,9 +20368,9 @@ synonym: "AA1" EXACT [] synonym: "mandibular aortic arch" EXACT [] xref: TAO:0005005 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001612 ! pharyngeal arch 1 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005006 @@ -20378,9 +20381,9 @@ synonym: "AA2" EXACT [] synonym: "hyoid aortic arch" EXACT [] xref: TAO:0005006 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001611 ! pharyngeal arch 2 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005007 @@ -20390,9 +20393,9 @@ def: "Aortic arch that is part of pharyngeal arch 3. The paired aortic arch 3 ar synonym: "AA3" EXACT [] xref: TAO:0005007 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001606 ! pharyngeal arch 3 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005008 @@ -20402,9 +20405,9 @@ def: "Aortic arch that is part of pharyngeal arch 4. The paired aortic arch 4 ar synonym: "AA4" EXACT [] xref: TAO:0005008 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001607 ! pharyngeal arch 4 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005009 @@ -20414,9 +20417,9 @@ def: "Aortic arch that is part of pharyngeal arch 5. Aortic arch 5 artery is pai synonym: "AA5" EXACT [] xref: TAO:0005009 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001608 ! pharyngeal arch 5 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005010 @@ -20429,9 +20432,9 @@ synonym: "mid-cerebral vein" EXACT [] synonym: "middle cerebral vein" EXACT [] xref: TAO:0005010 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005011 @@ -20442,8 +20445,8 @@ synonym: "pseudobranchial arteries" EXACT PLURAL [] xref: TAO:0005011 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005012 @@ -20454,10 +20457,10 @@ synonym: "AFA" EXACT [] synonym: "afferent filamental arteries" EXACT PLURAL [] xref: TAO:0005012 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000666 ! filamental artery relationship: part_of ZFA:0000716 ! afferent branchial artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005013 @@ -20467,9 +20470,9 @@ def: "The branch of the afferent branchial artery that continues posterodorsally synonym: "CCB" EXACT [] xref: TAO:0005013 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000716 ! afferent branchial artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005014 @@ -20480,9 +20483,9 @@ synonym: "RCB" EXACT [] synonym: "recurrent branch afferent branchial arteries" EXACT PLURAL [] xref: TAO:0005014 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000716 ! afferent branchial artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005015 @@ -20493,10 +20496,10 @@ synonym: "afferent lamellar arterioles" EXACT PLURAL [] synonym: "AFL" EXACT [] xref: TAO:0005015 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000211 ! gill lamella relationship: part_of ZFA:0005012 ! afferent filamental artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005016 @@ -20506,9 +20509,9 @@ def: "Aortic arch that is part of pharyngeal arch 6. Aortic arch 6 artery is pai synonym: "AA6" EXACT [] xref: TAO:0005016 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001609 ! pharyngeal arch 6 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005017 @@ -20518,9 +20521,9 @@ def: "The vessel between the anterior cerebral vein and the mid cerebral vein." synonym: "PMBC" EXACT [] xref: TAO:0005017 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005018 @@ -20530,10 +20533,10 @@ def: "Artery that exits the gill filament." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "EFA" EXACT [] xref: TAO:0005018 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000202 ! efferent branchial artery relationship: part_of ZFA:0000666 ! filamental artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005019 @@ -20544,10 +20547,10 @@ synonym: "efferent lamellar arterioles" EXACT PLURAL [] synonym: "ELA" EXACT [] xref: TAO:0005019 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000211 ! gill lamella relationship: part_of ZFA:0005018 ! efferent filamental artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005020 @@ -20557,9 +20560,9 @@ def: "Artery that irrigates the forebrain and midbrain." [ZFIN:ZDB-PUB-010205-5] synonym: "CtA" EXACT [] xref: TAO:0005020 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005021 @@ -20569,8 +20572,8 @@ def: "Extend upward from the PCS, branch to provide an arterial feed to the hind synonym: "CCtA" EXACT [] xref: TAO:0005021 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005022 @@ -20582,8 +20585,8 @@ synonym: "ORA" EXACT [] xref: TAO:0005022 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005023 @@ -20592,8 +20595,8 @@ namespace: zebrafish_anatomy def: "System responsible for generating hematopoietic cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005023 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005024 @@ -20602,9 +20605,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around trunk." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005024 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005025 @@ -20616,11 +20619,11 @@ synonym: "DLAV" EXACT [] xref: TAO:0005025 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0001285 ! intersegmental vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001073 ! axial vasculature relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005026 @@ -20631,9 +20634,9 @@ synonym: "lateral head vein" EXACT [] synonym: "PHS" EXACT [] xref: TAO:0005026 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005027 @@ -20644,9 +20647,9 @@ synonym: "caudal cerebral vein" EXACT [] synonym: "PCeV" EXACT [] xref: TAO:0005027 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005028 @@ -20661,10 +20664,10 @@ synonym: "dorsal aorta - posterior cardinal vein joint" EXACT [ZFIN:ZDB-PUB-0612 synonym: "DP joint" EXACT [] xref: TAO:0005028 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000014 ! dorsal aorta relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0005029 @@ -20676,9 +20679,9 @@ synonym: "RBI" EXACT [] xref: TAO:0005029 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005041 ! anterior lateral plate mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0005030 @@ -20689,9 +20692,9 @@ synonym: "DCV" EXACT [] xref: TAO:0005030 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005031 @@ -20701,9 +20704,9 @@ def: "Vessel that connects to the primitive hindbrain channel and the basilar ar synonym: "DLV" EXACT [] xref: TAO:0005031 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005032 @@ -20713,8 +20716,8 @@ def: "Vein that connects to the hyaloid vein that drains the eye. External to e synonym: "OV" EXACT [] xref: TAO:0005032 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005033 @@ -20724,8 +20727,8 @@ def: "Is an pair of arteries that form from the intersegmental vessels at the le synonym: "vertebral arteries" EXACT PLURAL [] xref: TAO:0005033 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005034 @@ -20737,10 +20740,10 @@ xref: TAO:0005034 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0000477 ! posterior cardinal vein relationship: develops_from ZFA:0001057 ! intersegmental vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005035 @@ -20751,9 +20754,9 @@ synonym: "SIV" EXACT [] synonym: "vitelline vein" EXACT [] xref: TAO:0005035 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005036 @@ -20763,8 +20766,8 @@ def: "A continuation of the anterior mesenteric artery, which branches out from synonym: "SIA" EXACT [] xref: TAO:0005036 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005037 @@ -20774,9 +20777,9 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th synonym: "tail vasculature" RELATED [] xref: TAO:0005037 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005038 @@ -20786,9 +20789,9 @@ synonym: "" RELATED [] synonym: "supraintestinal veins" EXACT PLURAL [] xref: TAO:0005038 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005039 @@ -20797,9 +20800,9 @@ namespace: zebrafish_anatomy synonym: "ALM" EXACT [] xref: TAO:0005039 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001065 ! lateral mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005040 @@ -20808,9 +20811,9 @@ namespace: zebrafish_anatomy synonym: "PLM" EXACT [] xref: TAO:0005040 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001065 ! lateral mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005041 @@ -20819,9 +20822,9 @@ namespace: zebrafish_anatomy synonym: "ALPM" EXACT [] xref: TAO:0005041 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000121 ! lateral plate mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005042 @@ -20830,9 +20833,9 @@ namespace: zebrafish_anatomy synonym: "PLPM" EXACT [] xref: TAO:0005042 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000121 ! lateral plate mesoderm -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0005043 @@ -20843,9 +20846,9 @@ synonym: "f-nevi" EXACT [] synonym: "naevus" EXACT [] xref: TAO:0005043 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005044 @@ -20856,8 +20859,8 @@ synonym: "optic arteries" EXACT PLURAL [] xref: TAO:0005044 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005045 @@ -20867,9 +20870,9 @@ def: "Artery that is internal to the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917, synonym: "hyaloid arteries" EXACT PLURAL [] xref: TAO:0005045 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005046 ! hyaloid vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005046 @@ -20880,8 +20883,8 @@ synonym: "hyaloid vasculature" RELATED [] synonym: "hyaloid vessels" EXACT PLURAL [] xref: TAO:0005046 is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005047 @@ -20891,9 +20894,9 @@ def: "Vein internal to the eye." [ZFIN:ZDB-PUB-010205-5] synonym: "hyaloid veins" EXACT PLURAL [] xref: TAO:0005047 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005046 ! hyaloid vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005048 @@ -20903,8 +20906,8 @@ def: "Vessel that branches from cranial division of the internal carotid artery, synonym: "PPrA" EXACT [] xref: TAO:0005048 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005049 @@ -20915,8 +20918,8 @@ synonym: "PrA" EXACT [] xref: TAO:0005049 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005048 ! primitive prosencephalic artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005050 @@ -20926,8 +20929,8 @@ def: "The PLA branches ventrally from the CrDI. It extends rostrally along the synonym: "PLA" EXACT [] xref: TAO:0005050 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005051 @@ -20938,8 +20941,8 @@ synonym: "CMV" EXACT [] synonym: "communicating vessels" EXACT [] xref: TAO:0005051 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005052 @@ -20950,8 +20953,8 @@ synonym: "AMCtA" EXACT [] synonym: "rostral mesencephalic central artery" EXACT [] xref: TAO:0005052 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005053 @@ -20961,8 +20964,8 @@ def: "Artery that branches off the cranial division of the internal carotid arte synonym: "NCA" EXACT [] xref: TAO:0005053 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005054 @@ -20975,8 +20978,8 @@ is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery relationship: develops_from ZFA:0005083 ! ventral branch nasal ciliary artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005055 @@ -20986,9 +20989,9 @@ def: "Drains the PLA loop proceeds straight caudally along the cranial midline j synonym: "MPLV" EXACT [] xref: TAO:0005055 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005056 @@ -20998,9 +21001,9 @@ def: "Vein that drains the median palatocerebral vein into the optic vein." [GOC synonym: "PLV" EXACT [] xref: TAO:0005056 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005057 @@ -21011,9 +21014,9 @@ comment: No evidence of epicardium layer in cardiac atrium in Hu et al 2001. xref: TAO:0005057 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005808 ! proepicardial cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005058 @@ -21022,10 +21025,10 @@ namespace: zebrafish_anatomy def: "The external layer of the ventricle bounding the ventricular myocardium. It is formed by a single layer of mesothelial cells supported by a basal lamina, and imbricated with collagen, fibroblasts, and vascular structures in the subepicardial space." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] xref: TAO:0005058 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0005057 ! epicardium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005059 @@ -21036,9 +21039,9 @@ comment: Cardiac conduction may occur in the trabecular layer via trabecular fib synonym: "trabecula" RELATED [] xref: TAO:0005059 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005060 @@ -21046,10 +21049,10 @@ name: trabecular layer of ventricle namespace: zebrafish_anatomy xref: TAO:0005060 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005059 ! trabecular layer relationship: part_of ZFA:0005061 ! ventricular myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005061 @@ -21058,10 +21061,10 @@ namespace: zebrafish_anatomy def: "Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] xref: TAO:0005061 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005062 @@ -21070,9 +21073,9 @@ namespace: zebrafish_anatomy def: "The outer layer the ventricular myocardium, muscle fibers are arranged in a compact form and involved the entire ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005062 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005061 ! ventricular myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005063 @@ -21083,9 +21086,9 @@ synonym: "cardiac pacemaker" EXACT [] synonym: "central conduction system" EXACT [] xref: TAO:0005063 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005064 @@ -21095,10 +21098,10 @@ def: "The atrioventricular valve has four distinct leaflets oriented anterior, p xref: TAO:0005064 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005065 @@ -21108,9 +21111,9 @@ def: "Multi-tissue structure composed of leaflets that separate parts of the hea synonym: "heart valves" EXACT PLURAL [] xref: TAO:0005065 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005066 @@ -21120,9 +21123,9 @@ def: "The portion of tissue that is the outer layer of the bulbus arteriosus. It synonym: "bulbus arteriosus externa" EXACT [] xref: TAO:0005066 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005067 @@ -21132,9 +21135,9 @@ def: "Composed of 7-10 layers of helically arranged smooth muscle cells surround synonym: "bulbus arteriosus media" EXACT [] xref: TAO:0005067 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005068 @@ -21144,9 +21147,9 @@ def: "Composed of subendothelium with longitudinally oriented collagen, reticula synonym: "bulbus arteriosus intima" EXACT [] xref: TAO:0005068 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005069 @@ -21156,10 +21159,10 @@ def: "Portion of tissue containing 3 and 30 cells in dorsal right quadrant of xref: TAO:0005069 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005601 ! sinoatrial ring -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005070 @@ -21171,10 +21174,10 @@ synonym: "downstream pacemaker" RELATED [] xref: TAO:0005070 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005073 ! atrioventricular ring -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005071 @@ -21195,10 +21198,10 @@ namespace: zebrafish_anatomy def: "A portion of endocardial tissue that is part of the atrioventricular ring." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005072 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001320 ! endocardium relationship: part_of ZFA:0005073 ! atrioventricular ring -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005073 @@ -21208,10 +21211,10 @@ def: "A ring of conduction tissue that forms in the atrioventricular canal." [ZF synonym: "AV ring" EXACT [] xref: TAO:0005073 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005074 @@ -21220,8 +21223,8 @@ namespace: zebrafish_anatomy def: "Cardiac conduction system, characterized by slow impulse propagation and prolonged refractory periods." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060227-6] xref: TAO:0005074 is_a: ZFA:0005063 ! cardiac conduction system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005075 @@ -21232,9 +21235,9 @@ synonym: "distal conduction system " RELATED [] synonym: "ventricular fast conduction system" EXACT [ZFIN:ZDB-PUB-120927-27] xref: TAO:0005075 is_a: ZFA:0005063 ! cardiac conduction system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005076 @@ -21243,9 +21246,9 @@ namespace: zebrafish_anatomy def: "Is a portion of tissue that will develop into vasculature." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005076 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0005077 @@ -21254,8 +21257,8 @@ namespace: zebrafish_anatomy def: "The primordial vasculature that will develop into blood vessels by the process of tubulogenesis. The vascular cord is composed of angioblast or vascular endothelial cells in a solid linear mass called a cord. The cord then undergoes tubulogenesis to form the lumen of the vessels." [ZFIN:ZDB-PUB-040416-1] xref: TAO:0005077 is_a: ZFA:0005076 ! primordial vasculature -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0005078 @@ -21265,8 +21268,8 @@ def: "Projects rostrally and dorsally from the AMCtA to irrigate the midportion synonym: "MMCtA" EXACT [] xref: TAO:0005078 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005079 @@ -21277,8 +21280,8 @@ synonym: "caudal mesencephalic central artery" EXACT [] synonym: "PMCtA" EXACT [] xref: TAO:0005079 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005080 @@ -21289,8 +21292,8 @@ synonym: "AMA" EXACT [] synonym: "rostral mesenteric artery" EXACT [] xref: TAO:0005080 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005081 @@ -21303,9 +21306,9 @@ synonym: "ICA" EXACT [] xref: TAO:0005081 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001053 ! primitive internal carotid artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000097 ! carotid artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005082 @@ -21316,9 +21319,9 @@ synonym: "dorsal branch nasal ciliary arteries" EXACT PLURAL [] xref: TAO:0005082 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005083 @@ -21327,9 +21330,9 @@ namespace: zebrafish_anatomy xref: TAO:0005083 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005084 @@ -21339,8 +21342,8 @@ def: "These arteries branch dorsally from both sides of the posterior communicat synonym: "metencephalic arteries" EXACT PLURAL [] xref: TAO:0005084 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005085 @@ -21350,8 +21353,8 @@ def: "The nasal arteries start at the internal carotid artery and travel rostral synonym: "NA" EXACT [] xref: TAO:0005085 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005086 @@ -21362,9 +21365,9 @@ synonym: "PA" EXACT [] synonym: "subclavian artery" EXACT [] xref: TAO:0005086 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005301 ! pectoral fin blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005087 @@ -21374,9 +21377,9 @@ def: "Vein from the pectoral fin that drains into the ACV just cranial to the AC synonym: "PV" EXACT [] xref: TAO:0005087 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005301 ! pectoral fin blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005088 @@ -21387,8 +21390,8 @@ synonym: "caudal mesenteric artery" EXACT [] synonym: "PMA" EXACT [] xref: TAO:0005088 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005089 @@ -21398,8 +21401,8 @@ def: "An elaborate set of vessels that branch off caudally from the anterior mes synonym: "SBA" EXACT [] xref: TAO:0005089 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005090 @@ -21411,9 +21414,9 @@ synonym: "primary hepatic portal vein" RELATED [] xref: TAO:0005090 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005035 ! subintestinal vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005091 @@ -21424,10 +21427,10 @@ synonym: "hepatic sinusoids" EXACT PLURAL [] xref: TAO:0005091 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0005035 ! subintestinal vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005092 @@ -21437,8 +21440,8 @@ def: "Paired veins that sprout from the dorsal midline junction and dive ventral synonym: "MsV" EXACT [] xref: TAO:0005092 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005093 @@ -21448,9 +21451,9 @@ def: "Vein that is fed by the nasal artery. It rises dorsally around the fron synonym: "NV" EXACT [] xref: TAO:0005093 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005094 @@ -21463,9 +21466,9 @@ synonym: "CVP" EXACT [] xref: TAO:0005094 is_a: ZFA:0005933 ! mature plexus is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005095 @@ -21474,9 +21477,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005095 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000108 ! fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005096 @@ -21485,9 +21488,9 @@ namespace: zebrafish_anatomy def: "Vasculature of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005096 is_a: ZFA:0005095 ! fin vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005097 @@ -21496,9 +21499,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005097 is_a: ZFA:0005095 ! fin vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005098 @@ -21508,9 +21511,9 @@ def: "Artery that is positioned in the intraray mesenchyme between the hemirays synonym: "central ray arteries" EXACT PLURAL [] xref: TAO:0005098 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005299 ! fin blood vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005099 @@ -21520,9 +21523,9 @@ def: "Vein that flanks and is just lateral to the fin ray, in the interray mesen synonym: "ray veins" EXACT PLURAL [] xref: TAO:0005099 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005299 ! fin blood vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005100 @@ -21532,8 +21535,8 @@ def: "Vessels that travel between artery and veins or vein and vein in a single synonym: "intervessel comisures" EXACT PLURAL [] xref: TAO:0005100 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005101 @@ -21543,8 +21546,8 @@ def: "Vessels that travel between veins in adjacent rays." [GOC:cvs, ORCiD:0000- synonym: "interray vessels" EXACT PLURAL [] xref: TAO:0005101 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005102 @@ -21553,8 +21556,8 @@ namespace: zebrafish_anatomy def: "Stripe of tissue fated to become the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005102 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005103 @@ -21563,8 +21566,8 @@ namespace: zebrafish_anatomy def: "Stripe of tissue on the ventral side of the fish, fated to become the ventral region of the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005103 is_a: ZFA:0005102 ! presumptive median fin fold -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005104 @@ -21573,8 +21576,8 @@ namespace: zebrafish_anatomy def: "Stripe of tissue on the dorsal side of the fish, fated to become the dorsal region of the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005104 is_a: ZFA:0005102 ! presumptive median fin fold -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005105 @@ -21585,9 +21588,9 @@ synonym: "lymph vessel" RELATED [] synonym: "lymph vessels" EXACT PLURAL [] xref: TAO:0005105 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000385 ! lymphatic system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005106 @@ -21596,8 +21599,8 @@ namespace: zebrafish_anatomy synonym: "LLL" EXACT [] xref: TAO:0005106 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005107 @@ -21606,8 +21609,8 @@ namespace: zebrafish_anatomy synonym: "PL" EXACT [] xref: TAO:0005107 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005108 @@ -21617,9 +21620,9 @@ comment: Probably a deep lymph vessel. This vessel was shown in ZDB-PUB-060616- synonym: "FL" EXACT [] xref: TAO:0005108 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005109 @@ -21630,9 +21633,9 @@ synonym: "JL" EXACT [] synonym: "JLV" EXACT [] xref: TAO:0005109 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005110 @@ -21642,8 +21645,8 @@ def: "The thoracic duct is the first perfused lymphatic, located between the dor xref: TAO:0005110 is_a: ZFA:0005296 ! axial lymph vessel relationship: develops_from ZFA:0005605 ! lymphangioblast cord -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005111 @@ -21653,20 +21656,20 @@ def: "Tract that originates in the telencephalon lies medial to the lateral fore synonym: "medial forebrain bundles" EXACT PLURAL [] xref: TAO:0005111 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005112 name: dorsal lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880] +def: "One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-070907-34] synonym: "dorsal lateral lines" EXACT PLURAL [] xref: TAO:0005112 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005113 @@ -21676,9 +21679,9 @@ def: "Neuromast that is part of the dorsal lateral line. (Also see Anatomical At synonym: "neuromast dorsal" EXACT [] xref: TAO:0005113 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005112 ! dorsal lateral line -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005114 @@ -21687,8 +21690,8 @@ namespace: zebrafish_anatomy def: "The middle lateral line system develops from cranial ectodermal placodes, that give rise to both the neuromasts and the middle lateral line sensory nerves that innervate the neuromasts. The middle lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the body that are innervated by several lateral line nerves, which project to the hindbrain. The middle lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005114 is_a: ZFA:0000034 ! lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005115 @@ -21700,8 +21703,8 @@ synonym: "primI" EXACT [] xref: TAO:0005115 is_a: ZFA:0001157 ! posterior lateral line primordium relationship: develops_from ZFA:0001156 ! posterior lateral line placode -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005116 @@ -21711,8 +21714,8 @@ def: "Second lateral line primordium. These primordia move at 0.2 somites/hour synonym: "secondary posterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005116 is_a: ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005117 @@ -21722,9 +21725,9 @@ def: "A migrating group of cells originating from an anterior lateral line placo synonym: "anterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005117 is_a: ZFA:0000228 ! lateral line primordium -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005118 @@ -21734,9 +21737,9 @@ def: "A migrating group of cells originating from the middle lateral line placod synonym: "middle lateral line primordia" EXACT PLURAL [] xref: TAO:0005118 is_a: ZFA:0000228 ! lateral line primordium -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005119 @@ -21746,8 +21749,8 @@ def: "A surface structure that will eventually grow to form a barbel. The prim synonym: "barbel primordia" EXACT PLURAL [] xref: TAO:0005119 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0005120 @@ -21756,8 +21759,8 @@ namespace: zebrafish_anatomy def: "The serous membrane that lines the peritoneal cavity. The peritoneum secretes serous fluid which allows free movement of the peritoneum and the intraperitoneal organs." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005120 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005121 @@ -21767,9 +21770,9 @@ def: "Dorsolateral placode that gives rise to the middle lateral line." [GOC:cvs synonym: "middle lateral line placodes" EXACT PLURAL [] xref: TAO:0005121 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005122 @@ -21778,9 +21781,9 @@ namespace: zebrafish_anatomy def: "Dorsal region of the axial hypoblast." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001378 ! axial hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0005123 @@ -21789,9 +21792,9 @@ namespace: zebrafish_anatomy def: "Epithelium lining the lumen of the gut." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005123 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005124 @@ -21802,10 +21805,10 @@ synonym: "intestine epithelium" EXACT [] synonym: "villous epithelium" EXACT [ZFIN:ZDB-PUB-090217-11] xref: TAO:0005124 is_a: ZFA:0001496 ! simple columnar epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005123 ! gut epithelium relationship: part_of ZFA:0005660 ! intestinal mucosa -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005125 @@ -21815,9 +21818,9 @@ def: "The entire digestive tract is lined by well developed villi, which are lon synonym: "intestinal villi" EXACT PLURAL [] xref: TAO:0005125 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0005126 @@ -21826,9 +21829,9 @@ namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the intestinal bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005126 is_a: ZFA:0005124 ! intestinal epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001076 ! intestinal bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005127 @@ -21837,9 +21840,9 @@ namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the mid intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005127 is_a: ZFA:0005124 ! intestinal epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001323 ! mid intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005128 @@ -21848,9 +21851,9 @@ namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the posterior intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005128 is_a: ZFA:0005124 ! intestinal epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000706 ! posterior intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005129 @@ -21859,9 +21862,9 @@ namespace: zebrafish_anatomy def: "A double layer composed of peritoneum that attaches the visceral organs to the body wall." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005129 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005120 ! peritoneum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005130 @@ -21870,8 +21873,8 @@ namespace: zebrafish_anatomy def: "The mesentery that originates from the dorsal side of the peritoneal cavity." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005130 is_a: ZFA:0005129 ! mesentery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005131 @@ -21880,22 +21883,22 @@ namespace: zebrafish_anatomy def: "The peritoneum that lines the walls of the peritoneal cavity." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005131 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005120 ! peritoneum relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005132 name: visceral peritoneum namespace: zebrafish_anatomy def: "The part of peritoneum that is a serous membrane covers the external surfaces of most abdominal organs." [GOC:cvs, ORCiD:0000-0002-2244-7917] -synonym: "tunica serosa" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] +synonym: "tunica serosa" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0005132 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005120 ! peritoneum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005133 @@ -21904,8 +21907,8 @@ namespace: zebrafish_anatomy def: "The mesentery that originates from the ventral side of the peritoneal cavity." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005133 is_a: ZFA:0005129 ! mesentery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005134 @@ -21916,8 +21919,8 @@ synonym: "dental epithelia" EXACT PLURAL [] xref: TAO:0005134 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0001174 ! pharyngeal epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005135 @@ -21928,8 +21931,8 @@ synonym: "pharyngeal tooth epithelium" EXACT [] synonym: "tooth epithelium" EXACT [] xref: TAO:0005135 is_a: ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005136 @@ -21940,9 +21943,9 @@ synonym: "ide" EXACT [] synonym: "inner enamel epithelium" EXACT [] xref: TAO:0005136 is_a: ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005137 @@ -21952,9 +21955,9 @@ def: "Outer layer of the dental organ." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "ode" EXACT [] xref: TAO:0005137 is_a: ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005138 @@ -21965,8 +21968,8 @@ synonym: "enamel organ" EXACT [] xref: TAO:0005138 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001153 ! tooth placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005139 @@ -21975,9 +21978,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme enclosed by dental organ." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005139 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005140 @@ -21989,8 +21992,8 @@ synonym: "tooth mesenchyme" EXACT [] xref: TAO:0005140 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005139 ! dental mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005141 @@ -22000,9 +22003,9 @@ def: "Material in the center of the dentine of the mature tooth. In secondary t xref: TAO:0005141 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005140 ! dental papilla -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005142 @@ -22012,9 +22015,9 @@ def: "A dentine-like hypermineralized substance that covers the zebrafish tooth synonym: "enamel" RELATED [] xref: TAO:0005142 is_a: ZFA:0005623 ! odontoid tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005143 @@ -22024,9 +22027,9 @@ def: "Mineralized collagen containing substance that forms the tooth structure. synonym: "dentin " EXACT [] xref: TAO:0005143 is_a: ZFA:0005623 ! odontoid tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005144 @@ -22036,9 +22039,9 @@ def: "Nerve that is a branch of cranial nerve VIII and innervates the cristae am synonym: "ampullary nerves" EXACT PLURAL [] xref: TAO:0005144 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000247 ! cranial nerve VIII -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005145 @@ -22048,9 +22051,9 @@ def: "Portion of tissue composed of contractile fibers." [GOC:cvs, ORCiD:0000-00 synonym: "muscles" EXACT PLURAL [] xref: TAO:0005145 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000548 ! musculature system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005146 @@ -22059,9 +22062,9 @@ namespace: zebrafish_anatomy def: "An area of medulla oblongata, outside the blood-brain barrier. The apical terminals of the neurons are, in a strategic location either to monitor the chemical constitution of the plasma or to release neurogenic substances into the general circulation." [ZFIN:ZDB-PUB-970602-2] xref: TAO:0005146 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005147 @@ -22071,8 +22074,8 @@ def: "A portion of tissue that is regrowing after damage or amputation." [GOC:cv synonym: "regenerating tissues" EXACT PLURAL [] xref: TAO:0005147 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005148 @@ -22082,9 +22085,9 @@ def: "Part of the regeneration epithelium closest to the fin." [GOC:cvs, ORCiD:0 synonym: "apical epidermal caps" EXACT PLURAL [] xref: TAO:0005148 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001389 ! regeneration epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005149 @@ -22094,9 +22097,9 @@ def: "Part of regeneration epithelium at the tip of the fin." [GOC:cvs, ORCiD:00 synonym: "distal epidermal caps" EXACT PLURAL [] xref: TAO:0005149 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001389 ! regeneration epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005150 @@ -22106,9 +22109,9 @@ def: "Layer of the wound epidermis that surrounds the blastema." [GOC:cvs, ORCiD synonym: "basal wound epidermis" EXACT [] xref: TAO:0005150 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001389 ! regeneration epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005151 @@ -22118,8 +22121,8 @@ def: "Iridescent iridophore containing gold reflecting platelets." [GOC:cvs, ORC subset: cell_slim xref: TAO:0005151 is_a: ZFA:0009199 ! iridophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2009-03-12T12:34:16Z @@ -22131,8 +22134,8 @@ def: "Iridescent iridophore containing silver reflecting platelets." [GOC:cvs, O subset: cell_slim xref: TAO:0005152 is_a: ZFA:0009199 ! iridophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2009-03-12T12:48:18Z @@ -22145,8 +22148,8 @@ synonym: "diarthrodial joints" RELATED [] synonym: "diarthroses" EXACT [] xref: TAO:0005153 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:31:49Z @@ -22157,9 +22160,9 @@ namespace: zebrafish_anatomy def: "Portion of organism substance that is a clear fluid that occupies the space in synovial joints." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005154 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005153 ! synovial joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:42:07Z @@ -22171,8 +22174,8 @@ def: "Is a joint where the ends of two bones are connected by cartilage." [GOC:c synonym: "synchondrosis" EXACT [] xref: TAO:0005155 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:52:52Z @@ -22185,8 +22188,8 @@ synonym: "syndesmoses" EXACT PLURAL [] synonym: "syndesmosis" EXACT [] xref: TAO:0005156 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:54:12Z @@ -22198,9 +22201,9 @@ def: "Tela chorioidea that lines the tectal ventricle." [GOC:cvs, ORCiD:0000-000 synonym: "tela choroidea tectal ventricle" EXACT [] xref: TAO:0005157 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000159 ! tectal ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T01:30:05Z @@ -22212,9 +22215,9 @@ def: "Tela chorioidea that lines the fourth ventricle." [GOC:cvs, ORCiD:0000-000 synonym: "tela choroidea fourth ventricle" EXACT [] xref: TAO:0005158 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000110 ! fourth ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T01:40:34Z @@ -22226,9 +22229,9 @@ def: "Tela chorioidea that lines the third ventricle." [GOC:cvs, ORCiD:0000-0002 synonym: "tela choroidea third ventricle" EXACT [] xref: TAO:0005159 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T02:04:56Z @@ -22240,9 +22243,9 @@ def: "Tela chorioidea that lines the telencephalic ventricle." [GOC:cvs, ORCiD:0 synonym: "tela choroidea telencephalic ventricle" EXACT [] xref: TAO:0005160 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000696 ! telencephalic ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T02:20:33Z @@ -22253,9 +22256,9 @@ namespace: zebrafish_anatomy def: "Artery that supplies blood to the liver." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005161 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-04-20T03:43:46Z @@ -22266,9 +22269,9 @@ namespace: zebrafish_anatomy def: "Ducts that transport enzymes between organs in the digestive system." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005162 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Ceri creation_date: 2009-04-20T04:51:36Z @@ -22280,9 +22283,9 @@ def: "Intercellular space surrounded by the basal surface of the hepatocytes tha comment: Should be located in rather then part_of when we get the appropriate relation. xref: TAO:0005163 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:33:42Z @@ -22293,9 +22296,9 @@ namespace: zebrafish_anatomy def: "Digestive system duct that collects bile from the canaliculus and transports bile through the liver." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005164 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:39:12Z @@ -22306,9 +22309,9 @@ namespace: zebrafish_anatomy def: "Digestive system duct that collects bile from the hepatic bile duct and the cystic duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005165 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001100 ! hepatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:43:23Z @@ -22319,9 +22322,9 @@ namespace: zebrafish_anatomy def: "Duct that connects the gall bladder and the common bile duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005166 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:56:39Z @@ -22335,9 +22338,9 @@ synonym: "papilla duodeni major" RELATED [] synonym: "papilla Vateri" EXACT [] xref: TAO:0005167 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:59:27Z @@ -22348,9 +22351,9 @@ namespace: zebrafish_anatomy def: "Vein that is central to a lobule in the liver." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005168 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-04-21T02:46:13Z @@ -22361,9 +22364,9 @@ namespace: zebrafish_anatomy def: "Duct that collects bile from the bile ductules and connects to the extrahepatic bile duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005169 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:19:40Z @@ -22374,9 +22377,9 @@ namespace: zebrafish_anatomy def: "Bile duct that collects from the intrahepatic ducts and feeds into the common bile duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005170 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001100 ! hepatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:26:36Z @@ -22387,8 +22390,8 @@ namespace: zebrafish_anatomy def: "A tube shaped multi-tissue structure lined with epithelial cells that collects secretions and routes them to their destination." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005171 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-04-27T04:45:59Z @@ -22401,9 +22404,9 @@ synonym: "1st lobe" EXACT [] synonym: "first lobe" EXACT [] xref: TAO:0005172 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2009-04-27T05:51:33Z @@ -22417,9 +22420,9 @@ synonym: "gall bladder lobe" EXACT [] synonym: "second lobe" EXACT [] xref: TAO:0005173 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T05:59:16Z @@ -22432,9 +22435,9 @@ synonym: "3rd lobe" EXACT [] synonym: "third lobe" EXACT [] xref: TAO:0005174 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2009-04-27T06:04:51Z @@ -22448,8 +22451,8 @@ subset: cell_slim synonym: "primary commissural interneuron" EXACT [] xref: TAO:0005175 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T01:41:54Z @@ -22463,8 +22466,8 @@ subset: cell_slim synonym: "secondary commissural interneuron" EXACT [] xref: TAO:0005176 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:07:49Z @@ -22479,8 +22482,8 @@ synonym: "V2b interneuron" RELATED [] synonym: "ventral longitudinal interneuron" EXACT [] xref: TAO:0005177 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:14:18Z @@ -22494,8 +22497,8 @@ subset: cell_slim synonym: "dorsal longitudinal interneuron" EXACT [] xref: TAO:0005178 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:21:58Z @@ -22509,8 +22512,8 @@ subset: cell_slim synonym: "middle primary motoneuron" EXACT [] xref: TAO:0005179 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:02:28Z @@ -22524,8 +22527,8 @@ subset: cell_slim synonym: "rostral primary motoneuron" EXACT [] xref: TAO:0005180 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:05:40Z @@ -22539,8 +22542,8 @@ subset: cell_slim synonym: "variable primary motoneuron" EXACT [] xref: TAO:0005181 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:38:21Z @@ -22555,9 +22558,9 @@ synonym: "middle dorsal 2 ipsilateral interneuron " EXACT [] xref: TAO:0005183 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-18T05:05:22Z @@ -22572,9 +22575,9 @@ synonym: "middle dorsal 2 contralateral llf interneuron " EXACT [] xref: TAO:0005184 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-18T05:16:33Z @@ -22589,9 +22592,9 @@ synonym: "middle dorsal 2 contralateral mlf interneuron " EXACT [] xref: TAO:0005185 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-18T05:18:53Z @@ -22605,8 +22608,8 @@ subset: cell_slim synonym: "bifurcate commissural interneuron" EXACT [] xref: TAO:0005186 is_a: ZFA:0005231 ! bifurcate interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T11:38:16Z @@ -22620,9 +22623,9 @@ synonym: "middle medial interneuron " EXACT [] xref: TAO:0005187 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T12:31:49Z @@ -22636,9 +22639,9 @@ synonym: "middle rostral 1 interneuron " EXACT [] xref: TAO:0005188 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T12:33:39Z @@ -22652,9 +22655,9 @@ synonym: "middle rostral 2 interneuron " EXACT [] xref: TAO:0005189 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T12:40:02Z @@ -22668,9 +22671,9 @@ synonym: "middle ventral 1 neuron " EXACT [] xref: TAO:0005190 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T01:10:53Z @@ -22684,9 +22687,9 @@ synonym: "middle ventral 2 neuron " EXACT [] xref: TAO:0005191 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T01:15:56Z @@ -22700,9 +22703,9 @@ synonym: "rostral intermediate 2 caudal interneuron " EXACT [] xref: TAO:0005192 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T02:39:18Z @@ -22716,9 +22719,9 @@ synonym: "rostral intermediate 2 rostral interneuron " EXACT [] xref: TAO:0005193 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T03:08:46Z @@ -22733,9 +22736,9 @@ synonym: "rostral lateral 1 interneuron " EXACT [] xref: TAO:0005194 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T03:22:51Z @@ -22750,9 +22753,9 @@ synonym: "middle dorsal 3 contralateral llf interneuron " EXACT [] xref: TAO:0005195 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-22T05:10:40Z @@ -22767,9 +22770,9 @@ synonym: "middle dorsal 3 contralateral mlf interneuron " EXACT [] xref: TAO:0005196 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-22T05:13:02Z @@ -22784,9 +22787,9 @@ synonym: "middle dorsal 3 ipsilateral interneuron " EXACT [] xref: TAO:0005197 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-22T05:15:04Z @@ -22800,9 +22803,9 @@ synonym: "rostral lateral 2 interneuron " EXACT [] xref: TAO:0005198 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T04:33:20Z @@ -22815,9 +22818,9 @@ subset: cell_slim synonym: "rostral lateral 2 rostral interneuron " EXACT [] xref: TAO:0005199 is_a: ZFA:0005198 ! RoL2 -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T04:48:39Z @@ -22830,9 +22833,9 @@ subset: cell_slim synonym: "rostral lateral 2 caudal interneuron " EXACT [] xref: TAO:0005200 is_a: ZFA:0005198 ! RoL2 -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T04:49:28Z @@ -22846,9 +22849,9 @@ synonym: "rostral lateral 3 interneuron " EXACT [] xref: TAO:0005201 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T05:06:36Z @@ -22862,9 +22865,9 @@ synonym: "rostral medial 1 caudal interneuron " EXACT [] xref: TAO:0005202 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T05:08:26Z @@ -22878,9 +22881,9 @@ synonym: "rostral medial 1 rostral interneuron " EXACT [] xref: TAO:0005203 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T05:09:50Z @@ -22893,9 +22896,9 @@ subset: cell_slim synonym: "rostral ventral 3 interneuron " EXACT [] is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:14:08Z @@ -22909,9 +22912,9 @@ synonym: "rostral medial 2 lateral interneuron " EXACT [] xref: TAO:0005205 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:43:42Z @@ -22925,9 +22928,9 @@ synonym: "rostral medial 2 medial interneuron " EXACT [] xref: TAO:0005206 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:45:01Z @@ -22941,9 +22944,9 @@ synonym: "rostral medial 3 lateral interneuron " EXACT [] xref: TAO:0005207 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:46:19Z @@ -22957,9 +22960,9 @@ synonym: "rostral medial 3 medial interneuron " RELATED [] xref: TAO:0005208 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:52:04Z @@ -22971,9 +22974,9 @@ def: "Is a CNS interneuron that is part of the hindbrain." [GOC:cvs, ORCiD:0000- subset: cell_slim xref: TAO:0005209 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T10:21:27Z @@ -22985,8 +22988,8 @@ def: "CNS interneurons located in the midbrain." [GOC:cvs, ORCiD:0000-0002-2244- subset: cell_slim xref: TAO:0005210 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T11:14:28Z @@ -22999,9 +23002,9 @@ subset: cell_slim synonym: "mesencephalon lateral interneuron" EXACT [] xref: TAO:0005211 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T12:35:19Z @@ -23015,9 +23018,9 @@ synonym: "mesencephalon medial interneuron" EXACT [] xref: TAO:0005212 is_a: ZFA:0005210 ! midbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T01:05:12Z @@ -23030,9 +23033,9 @@ subset: cell_slim synonym: "mesencephalon lateral rostral interneuron" EXACT [] xref: TAO:0005213 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T01:26:45Z @@ -23045,9 +23048,9 @@ subset: cell_slim synonym: "mesencephalon lateral caudal interneuron" EXACT [] xref: TAO:0005214 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T01:29:37Z @@ -23060,9 +23063,9 @@ subset: cell_slim synonym: "mesencephalon lateral medial interneuron" EXACT [] xref: TAO:0005215 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:21:45Z @@ -23075,9 +23078,9 @@ subset: cell_slim synonym: "mesencephalon medial 1 interneuron" EXACT [] xref: TAO:0005216 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:23:47Z @@ -23090,9 +23093,9 @@ subset: cell_slim synonym: "caudal ventral interneuron" EXACT [] xref: TAO:0005217 is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000949 ! rhombomere 7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:33:31Z @@ -23105,9 +23108,9 @@ subset: cell_slim synonym: "caudal dorsal interneuron" EXACT [] xref: TAO:0005218 is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000949 ! rhombomere 7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:42:52Z @@ -23120,9 +23123,9 @@ synonym: "choroid vascular circuit" RELATED [] synonym: "CVC" EXACT [] xref: TAO:0005219 is_a: ZFA:0000099 ! brain vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001443 ! choroid plexus -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2009-07-09T02:58:20Z @@ -23133,8 +23136,8 @@ namespace: zebrafish_anatomy def: "A melanophore stripe that forms the immature pigment pattern." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005220 is_a: ZFA:0001463 ! melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-07-09T03:59:45Z @@ -23145,8 +23148,8 @@ namespace: zebrafish_anatomy def: "A larval melanophore stripe that forms a band extending from the head to the tail along the dorsal apex of the myotomes." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005221 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-07-09T04:04:10Z @@ -23157,8 +23160,8 @@ namespace: zebrafish_anatomy def: "A larval melanophore stripe that forms a band, of pigmentation extending from the bases of the eyes on each side of the midline to the top of the tail, that underlies the myotomes bilaterally, still is dorsal to the yolk." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005222 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2009-07-09T04:05:57Z @@ -23169,8 +23172,8 @@ namespace: zebrafish_anatomy def: "The larval melanophore stripe that is at the level of the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005223 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2009-07-09T04:29:18Z @@ -23181,8 +23184,8 @@ namespace: zebrafish_anatomy def: "The larval melanophore stripe that forms a band over the ventral surface of the yolk sac." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005224 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-07-09T04:30:34Z @@ -23193,8 +23196,8 @@ namespace: zebrafish_anatomy def: "Lip that covers the lower portion of the mouth." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002060 is_a: ZFA:0007006 ! lip -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T04:42:58Z @@ -23205,8 +23208,8 @@ namespace: zebrafish_anatomy def: "Lip that covers the upper portion of the mouth." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001970 is_a: ZFA:0007006 ! lip -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T04:43:52Z @@ -23220,9 +23223,9 @@ synonym: "proto neuromast" RELATED [] synonym: "proto-neuromast" RELATED [] xref: TAO:0005227 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2009-07-09T04:49:53Z @@ -23234,9 +23237,9 @@ def: "A portion of tissue that contains the choroid vasculature. It lies at the synonym: "choroid" EXACT [ISBN:1402070861] xref: TAO:0005229 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-14T02:05:16Z @@ -23249,8 +23252,8 @@ subset: cell_slim synonym: "commissural bifurcating longitudinal" EXACT [] xref: TAO:0005230 is_a: ZFA:0005231 ! bifurcate interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-17T01:12:14Z @@ -23262,8 +23265,8 @@ def: "Is a spinal interneuron that has an axon that splits into roughly equal si subset: cell_slim xref: TAO:0005231 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-17T01:22:50Z @@ -23277,8 +23280,8 @@ synonym: "larval VeLD" RELATED [] synonym: "multipolar commissural descending interneuron" EXACT [] xref: TAO:0005232 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:46:32Z @@ -23293,8 +23296,8 @@ synonym: "commissural descending interneurons" EXACT [ZFIN:ZDB-PUB-081114-2] synonym: "V2a interneuron" RELATED [] xref: TAO:0005233 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:55:01Z @@ -23307,8 +23310,8 @@ subset: cell_slim synonym: "commissural longitudinal ascending interneuron" EXACT [] xref: TAO:0005234 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:14:51Z @@ -23321,8 +23324,8 @@ subset: cell_slim synonym: "unipolar commissural descending interneuron" RELATED [] xref: TAO:0005235 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:26:07Z @@ -23339,8 +23342,8 @@ synonym: "prorubricyte" EXACT [ZFIN:ZDB-PUB-070221-1] xref: CL:0000549 xref: TAO:0005236 is_a: ZFA:0005237 ! erythroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-08-10T05:29:27Z @@ -23354,8 +23357,8 @@ synonym: "normoblast" EXACT [] xref: CL:0000765 xref: TAO:0005237 is_a: ZFA:0009325 ! erythroid lineage cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-10T05:13:41Z @@ -23370,9 +23373,9 @@ synonym: "renin secreting cell" EXACT [] xref: CL:0000648 xref: TAO:0005238 is_a: ZFA:0009118 ! smooth muscle cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-10T05:41:07Z @@ -23386,9 +23389,9 @@ synonym: "plug cell" EXACT [] xref: CL:0007022 xref: TAO:0005239 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2009-08-10T06:26:10Z @@ -23407,8 +23410,8 @@ synonym: "Kolmer-Agduhr cell" EXACT [] xref: CL:0005007 xref: TAO:0005240 is_a: ZFA:0007120 ! cerebrospinal fluid contacting neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2009-08-11T02:50:27Z @@ -23427,8 +23430,8 @@ synonym: "rubricyte" EXACT [] xref: CL:0000550 xref: TAO:0005241 is_a: ZFA:0005237 ! erythroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T03:38:32Z @@ -23443,8 +23446,8 @@ synonym: "multiciliated epithelial cell" EXACT [] xref: CL:0005012 xref: TAO:0005242 is_a: ZFA:0009035 ! ciliated epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:29:39Z @@ -23459,8 +23462,8 @@ synonym: "single-ciliated epithelial cell" EXACT [] xref: CL:0005013 xref: TAO:0005243 is_a: ZFA:0009035 ! ciliated epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:30:15Z @@ -23474,8 +23477,8 @@ synonym: "auditory support cell" EXACT [] xref: CL:0005014 xref: TAO:0005244 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:41:03Z @@ -23490,8 +23493,8 @@ xref: CL:0005002 xref: TAO:0002148 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:53:40Z @@ -23505,9 +23508,9 @@ synonym: "blastemal fibroblast" EXACT [] synonym: "blastemal fibroblasts" EXACT PLURAL [] xref: TAO:0005246 is_a: ZFA:0009026 ! fibroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005147 ! regenerating tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-12T01:43:26Z @@ -23521,8 +23524,8 @@ synonym: "circumferential ascending interneuron" EXACT [] synonym: "V1 interneuron" RELATED [] xref: TAO:0005247 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-08-21T04:22:15Z @@ -23535,9 +23538,9 @@ synonym: "TCB" EXACT [ZFIN:ZDB-PUB-080908-10] xref: TAO:0005248 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005027 ! posterior cerebral vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005219 ! choroid plexus vascular circuit -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2009-11-02T04:07:52Z @@ -23549,9 +23552,9 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th xref: TAO:0001079 xref: TAO:0005249 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-11-10T02:31:54Z @@ -23562,9 +23565,9 @@ namespace: zebrafish_anatomy def: "Microvessel of the blood circulation system lined with vascular endothelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005250 is_a: ZFA:0005251 ! microcirculatory vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:15:32Z @@ -23576,9 +23579,9 @@ def: "A portion of tissue that consists of a tube composed of epithelial cells t synonym: "vasculature" RELATED [] xref: TAO:0005251 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:16:24Z @@ -23589,9 +23592,9 @@ namespace: zebrafish_anatomy def: "Microvessel of the lymphatic system lined with a single layer of overlapping endothelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005252 is_a: ZFA:0005251 ! microcirculatory vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:27:39Z @@ -23603,9 +23606,9 @@ def: "Simple squamous epithelium that lines the capsule of the renal glomerulus. synonym: "parietal epithelial layer" EXACT [] xref: TAO:0005253 is_a: ZFA:0001498 ! simple squamous epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005254 ! renal glomerular capsule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2009-11-11T01:39:19Z @@ -23617,9 +23620,9 @@ def: "Portion of tissue that encapsulates the glomerulus of the renal corpuscle. synonym: "Bowman's capsule " EXACT [] xref: TAO:0005254 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2009-11-11T01:45:02Z @@ -23630,9 +23633,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the blood vasculature. Feeds into capillaries. Arterioles carry blood away from the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002138 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:46:54Z @@ -23644,9 +23647,9 @@ def: "A portion of tissue formed between the base of the intestinal villi that i synonym: "intestinal crypt" RELATED [ZFIN:ZDB-PUB-090217-11] xref: TAO:0005256 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-07T12:26:13Z @@ -23657,8 +23660,8 @@ namespace: zebrafish_anatomy def: "The vascular endothelium that lines blood vasculature." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005257 is_a: ZFA:0001639 ! vascular endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:16:38Z @@ -23669,9 +23672,9 @@ namespace: zebrafish_anatomy def: "The vascular endothelium that lines the lymph vessels." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005258 is_a: ZFA:0001639 ! vascular endothelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005844 ! lymph vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:18:09Z @@ -23682,8 +23685,8 @@ namespace: zebrafish_anatomy def: "Blood vessel endothelium that has tight junctions between the endothelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005259 is_a: ZFA:0005257 ! blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:19:54Z @@ -23694,8 +23697,8 @@ namespace: zebrafish_anatomy def: "Blood vessel endothelium that has pores that allow passage small molecules and proteins." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005260 is_a: ZFA:0005257 ! blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:21:55Z @@ -23706,8 +23709,8 @@ namespace: zebrafish_anatomy def: "Fenestrated blood vessel endothelium with pores that are large enough for blood cells to pass. The basal lamina and gap junctions may be discontinuous." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005261 is_a: ZFA:0005260 ! fenestrated blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:51:27Z @@ -23719,8 +23722,8 @@ def: "Caudal procurrent ray that is dorsally located on the caudal fin skeleton. synonym: "dorsal procurrent caudal-fin ray" EXACT [] xref: TAO:0001829 is_a: ZFA:0001584 ! caudal fin procurrent ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:06:39Z @@ -23732,8 +23735,8 @@ def: "Caudal procurrent ray that is ventrally located on the caudal fin skeleton synonym: "ventral procurrent ray" EXACT [] xref: TAO:0001830 is_a: ZFA:0001584 ! caudal fin procurrent ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:13:14Z @@ -23747,8 +23750,8 @@ synonym: "ligamentum primordiale " EXACT [] synonym: "maxillo-mandibular ligament" EXACT [] xref: TAO:0001828 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:28:51Z @@ -23759,8 +23762,8 @@ namespace: zebrafish_anatomy def: "Ligament that connects the premaxilla to the maxilla." [TAO:curator] xref: TAO:0001827 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:52:49Z @@ -23771,8 +23774,8 @@ namespace: zebrafish_anatomy comment: The DLF in zebrafish is not homologous to the Mammalian DLF. Mammalian DLF is in brain, the fish DLF is in spinal cord. synonym: "DLF" RELATED [] is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T04:19:10Z @@ -23783,8 +23786,8 @@ namespace: zebrafish_anatomy def: "Muscle that moves parts of the body in a superior direction to an erect position. Antagonistic to depressor muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005267 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-03T05:15:15Z @@ -23795,8 +23798,8 @@ namespace: zebrafish_anatomy def: "A muscle that brings a body part closer to the sagittal plane of the body." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002136 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T12:59:52Z @@ -23807,8 +23810,8 @@ namespace: zebrafish_anatomy def: "A muscle that moves a body part away from the sagittal plane of the body." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002135 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T01:05:41Z @@ -23819,8 +23822,8 @@ namespace: zebrafish_anatomy def: "A muscle that moves body parts into an inferior direction or lowered position. Antagonistic to erector muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005270 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T01:15:51Z @@ -23831,8 +23834,8 @@ namespace: zebrafish_anatomy def: "A muscle that decrease the angle of a joint." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005271 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T01:20:04Z @@ -23846,9 +23849,9 @@ synonym: "juvenile ovary" EXACT [ZFIN:ZDB-PUB-070305-2] xref: TAO:0005272 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001262 ! gonad primordium -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2009-12-09T11:35:20Z @@ -23860,9 +23863,9 @@ def: "A thin layer of smooth muscle immediately beneath the base of the villi wh synonym: "intestinal lamina muscularis mucosae" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0005273 is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T01:36:48Z @@ -23873,8 +23876,8 @@ namespace: zebrafish_anatomy def: "A non-striated muscle that is composed of spindle-shaped cells. Smooth muscle usually is organized into sheets that line cavitated organs." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005274 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T02:57:18Z @@ -23885,8 +23888,8 @@ namespace: zebrafish_anatomy def: "Fin muscle that is located on the anterior edge of the fin. Arrector muscles change the angle of the leading edge of the fin during swimming." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002147 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T04:50:10Z @@ -23896,8 +23899,8 @@ name: inclinator muscle namespace: zebrafish_anatomy xref: TAO:0005276 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T04:51:38Z @@ -23908,8 +23911,8 @@ namespace: zebrafish_anatomy def: "Muscle, composed of long cylindrical, multinucleated cells that attaches to the skeleton via tendons." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005277 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T05:06:51Z @@ -23919,9 +23922,9 @@ name: enteric longitudinal muscle namespace: zebrafish_anatomy def: "Smooth muscle of the enteric muscle system in which the cells are aligned parallel to the lumen of the gut." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001324 ! enteric musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T05:48:52Z @@ -23932,9 +23935,9 @@ namespace: zebrafish_anatomy def: "Smooth muscle of the enteric muscle system in which the cells are aligned perpendicular to the lumen of the gut." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005279 is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001324 ! enteric musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T05:51:25Z @@ -23945,8 +23948,8 @@ namespace: zebrafish_anatomy def: "Muscle composed of cardiac muscle cells that is part of the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005280 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T06:04:03Z @@ -23958,9 +23961,9 @@ def: "The part of the nephron that filters blood." [GOC:cvs, ORCiD:0000-0002-224 synonym: "Malpighian corpuscle" EXACT [] xref: TAO:0005281 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005282 ! nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T01:11:46Z @@ -23971,9 +23974,9 @@ namespace: zebrafish_anatomy def: "Functional unit of the kidney that filters waste." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002153 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T02:47:46Z @@ -23987,9 +23990,9 @@ synonym: "inter-glomerular space" EXACT [] synonym: "urinary space" EXACT [] xref: TAO:0005283 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T02:51:01Z @@ -24000,11 +24003,11 @@ namespace: zebrafish_anatomy def: "Capillary that is part of the renal glomerulus. Glomerular capillary endothelial membranes in zebrafish normally have a fenestrated morphology that is visible at the ultrastructural level." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-000824-1] xref: TAO:0005284 is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001288 ! renal glomerulus relationship: part_of ZFA:0005305 ! kidney vasculature relationship: part_of ZFA:0005590 ! capillary loop nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:00:45Z @@ -24016,9 +24019,9 @@ def: "Membrane between the mesonephric podocytes and the renal glomerular capill synonym: "glomerular filtration membrane" EXACT [] xref: TAO:0005285 is_a: ZFA:0001485 ! basal lamina -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001288 ! renal glomerulus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:26:30Z @@ -24029,9 +24032,9 @@ namespace: zebrafish_anatomy def: "Middle layer of the glomerular basement membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005286 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:52:52Z @@ -24042,9 +24045,9 @@ namespace: zebrafish_anatomy def: "Layer of the glomerular basement membrane adjacent to the glomerular capillary." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005287 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:56:00Z @@ -24055,9 +24058,9 @@ namespace: zebrafish_anatomy def: "Layer of the glomerular basement membrane adjacent to the podocytes and capsular space." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005288 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:56:32Z @@ -24068,9 +24071,9 @@ namespace: zebrafish_anatomy def: "Tubes in the kidney that collect and transport urine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-071029-9] xref: TAO:0005289 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T04:36:59Z @@ -24081,9 +24084,9 @@ namespace: zebrafish_anatomy def: "Renal tubule that connects to the renal corpuscle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005290 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:39:12Z @@ -24094,9 +24097,9 @@ namespace: zebrafish_anatomy def: "Portion of the renal tubule which is just posterior to the proximal convoluted tubule." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005291 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:41:23Z @@ -24107,9 +24110,9 @@ namespace: zebrafish_anatomy def: "Portion of the renal tubule which is just posterior to the distal early tubule." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005292 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:43:22Z @@ -24121,9 +24124,9 @@ def: "Portion of the renal tubule which is just posterior to the proximal straig synonym: "distal early tubules" EXACT PLURAL [] xref: TAO:0005293 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:44:30Z @@ -24134,8 +24137,8 @@ namespace: zebrafish_anatomy def: "Renal duct that collects the output from renal tubules." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005294 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T01:17:47Z @@ -24146,8 +24149,8 @@ namespace: zebrafish_anatomy def: "Blood vessel that runs along the rostral-caudal axis of the fish." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005295 is_a: ZFA:0001073 ! axial vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:24:10Z @@ -24158,9 +24161,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel that runs along the rostral-caudal axis of the fish." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001073 ! axial vasculature is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:24:34Z @@ -24171,9 +24174,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of cranial vasculature." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005297 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:25:23Z @@ -24184,9 +24187,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel that is located in the head." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005298 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:25:47Z @@ -24197,9 +24200,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005299 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005095 ! fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:52:39Z @@ -24210,9 +24213,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel part of fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005300 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005095 ! fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:53:08Z @@ -24223,9 +24226,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005301 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005096 ! pectoral fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:54:07Z @@ -24236,9 +24239,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel part of pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005302 is_a: ZFA:0005300 ! fin lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005096 ! pectoral fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:54:43Z @@ -24249,10 +24252,10 @@ namespace: zebrafish_anatomy def: "Lymph vessel that is located in the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005303 is_a: ZFA:0005300 ! fin lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005097 ! caudal fin vasculature relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:55:44Z @@ -24263,9 +24266,9 @@ namespace: zebrafish_anatomy def: "Blood vessel located within the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005304 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005097 ! caudal fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:55:49Z @@ -24276,9 +24279,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005305 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-20T03:02:06Z @@ -24289,9 +24292,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005306 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-20T03:02:27Z @@ -24302,10 +24305,10 @@ namespace: zebrafish_anatomy def: "Arteriole that carries blood into the glomerular capillaries." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002139 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T03:02:56Z @@ -24316,10 +24319,10 @@ namespace: zebrafish_anatomy def: "Arteriole that carries blood out of the glomerular capillaries." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002140 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T03:05:49Z @@ -24330,9 +24333,9 @@ namespace: zebrafish_anatomy def: "Capillary that is part of the pronephric glomerulus. Glomerular capillary endothelial membranes in zebrafish normally have a fenestrated morphology that is visible at the ultrastructural level." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-000824-1] xref: TAO:0005309 is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:29:44Z @@ -24344,9 +24347,9 @@ def: "Portion of tissue that encapsulates the glomerulus of the pronephros." [GO synonym: "Bowman's capsule " EXACT [] xref: TAO:0005310 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:39:01Z @@ -24358,9 +24361,9 @@ def: "Simple squamous epithelium that lines the capsule of the pronephric glomer synonym: "pronephric parietal epithelial layer" EXACT [] xref: TAO:0005311 is_a: ZFA:0001498 ! simple squamous epithelium -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0005310 ! pronephric glomerular capsule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:40:01Z @@ -24374,9 +24377,9 @@ synonym: "inter-glomerular space" EXACT [] synonym: "urinary space" EXACT [] xref: TAO:0005312 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:41:05Z @@ -24388,9 +24391,9 @@ def: "Membrane between the pronephric podocytes and the pronephric glomerular ca synonym: "pronephric glomerular filtration membrane" EXACT [] xref: TAO:0005313 is_a: ZFA:0001485 ! basal lamina -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:59:03Z @@ -24401,9 +24404,9 @@ namespace: zebrafish_anatomy def: "Any of the tubular multi-tissue structures through which blood circulates in the body." [vHOG:curator] xref: TAO:0002137 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T02:17:51Z @@ -24414,9 +24417,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the blood vasculature formed by the anastomosis of capillaries. Venules carry blood toward the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005315 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T03:29:15Z @@ -24429,9 +24432,9 @@ synonym: "fin membrane pectoral fin bud" RELATED [] xref: TAO:0005316 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000085 ! apical ectodermal ridge pectoral fin bud -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-02-10T02:37:39Z @@ -24444,9 +24447,9 @@ synonym: "pectoral fin membrane" EXACT [] xref: TAO:0005317 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005316 ! fin fold pectoral fin bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-02-10T03:27:29Z @@ -24468,8 +24471,8 @@ def: "Lymph vessel that is located between the somites." [GOC:cvs, ORCiD:0000-00 synonym: "islv" EXACT [] xref: TAO:0005319 is_a: ZFA:0005105 ! lymph vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:28:00Z @@ -24480,8 +24483,8 @@ namespace: zebrafish_anatomy synonym: "dllv" EXACT [] xref: TAO:0005320 is_a: ZFA:0005296 ! axial lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:29:42Z @@ -24492,9 +24495,9 @@ namespace: zebrafish_anatomy def: "Smooth muscle that is part of the blood vessel wall." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060216-3] xref: TAO:0005321 is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005314 ! blood vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-10T05:39:30Z @@ -24509,9 +24512,9 @@ xref: CL:0005009 xref: TAO:0005322 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009374 ! kidney epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-02-10T06:32:34Z @@ -24525,8 +24528,8 @@ xref: CL:0005006 xref: TAO:0005323 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0007123 ! ionocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T01:18:18Z @@ -24538,9 +24541,9 @@ def: "Ionocyte located in the gills." [GOC:cvs, ORCiD:0000-0002-2244-7917] subset: cell_slim xref: TAO:0005324 is_a: ZFA:0005323 ! ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T01:22:16Z @@ -24554,9 +24557,9 @@ synonym: "extrabranchial ionocyte" RELATED [] synonym: "skin ionocyte" EXACT [] xref: TAO:0005325 is_a: ZFA:0005323 ! ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T02:13:14Z @@ -24570,9 +24573,9 @@ synonym: "NaK-MRC" RELATED [] synonym: "NaR cell" RELATED [] xref: TAO:0005326 is_a: ZFA:0005325 ! integument ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T02:29:17Z @@ -24586,9 +24589,9 @@ synonym: "HR cell" RELATED [] synonym: "VH-MRC" RELATED [] xref: TAO:0005327 is_a: ZFA:0005325 ! integument ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T02:32:20Z @@ -24602,8 +24605,8 @@ xref: CL:0005001 xref: TAO:0005328 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24617,8 +24620,8 @@ xref: CL:0005003 xref: TAO:0005329 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24632,8 +24635,8 @@ xref: CL:0005004 xref: TAO:0005331 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24647,8 +24650,8 @@ xref: CL:0005005 xref: TAO:0005332 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24659,9 +24662,9 @@ namespace: zebrafish_anatomy def: "A multi-tissue mediosagittal cylinder-shaped structure, clearly isolated from the jaw and adhered by differentiated plicae to the lateral walls. It is composed of a muscle surrounded by a squamous epithelium." [ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24] xref: TAO:0005333 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000547 ! mouth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T03:04:28Z @@ -24672,9 +24675,9 @@ namespace: zebrafish_anatomy def: "The thick, high squamous-stratified epithelium that covers the lips. It contains abundant melanocytes, many mucous cells and has well differentiated taste buds." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060921-12] xref: TAO:0005334 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007006 ! lip -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T03:12:14Z @@ -24686,8 +24689,8 @@ def: "Embryonic structure that forms from the anterior gut epithelium at the lev xref: TAO:0005335 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0005336 ! presumptive swim bladder -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2010-03-18T03:59:33Z @@ -24700,9 +24703,9 @@ synonym: "swim bladder anlage" RELATED [ZFIN:ZDB-PUB-100202-11] xref: TAO:0005336 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-03-18T04:20:42Z @@ -24714,8 +24717,8 @@ def: "Portion of tissue that forms from the swim bladder epithelium at the anter xref: TAO:0002145 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000076 ! swim bladder -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-03-18T04:28:20Z @@ -24728,9 +24731,9 @@ synonym: "posterior recess of diencephalic ventricle" EXACT [ZFIN:ZDB-PUB-091221 synonym: "recessus posterior " EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0005338 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T05:40:53Z @@ -24741,9 +24744,9 @@ namespace: zebrafish_anatomy def: "Is a diencephalic nucleus located in the caudal periventricular hypothalamus surrounding the lateral recess of the third ventricle." [ZFIN:ZDB-PUB-091221-27] xref: TAO:0005339 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000324 ! caudal periventricular hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T05:52:56Z @@ -24754,9 +24757,9 @@ namespace: zebrafish_anatomy def: "A diencephalic nucleus that is part of caudal periventricular hypothalmus surrounding the posterior recess of the third ventricle." [ZFIN:ZDB-PUB-091221-27] xref: TAO:0005340 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000324 ! caudal periventricular hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T05:59:24Z @@ -24769,8 +24772,8 @@ synonym: "medial longitudinal CA tract" EXACT [ZFIN:ZDB-PUB-091221-28] synonym: "mlct" EXACT [] xref: TAO:0005341 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:07:36Z @@ -24781,8 +24784,8 @@ namespace: zebrafish_anatomy def: "CNS white matter, an axonal tract between ventral diencephalon and ventral telencephalon. At 3 d, the anterior catecholaminergic tract includes noradrenergic projections from the hindbrain and dopaminergic projections from ventral dopaminergic neurons. During later development, other catecholaminergic projections may also contribute to the anterior catecholaminergic tract." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-091221-28] xref: TAO:0002144 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:11:28Z @@ -24793,8 +24796,8 @@ namespace: zebrafish_anatomy def: "CNS white matter, axonal tract interconnecting catecholaminergic cell groups in the posterior tuberculum and hypothalamus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-091221-28] xref: TAO:0005343 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:13:25Z @@ -24805,8 +24808,8 @@ namespace: zebrafish_anatomy def: "CNS white matter, axonal tract between the preoptic region and ventral diencephalon." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-091221-28] xref: TAO:0005344 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:14:28Z @@ -24818,8 +24821,8 @@ def: "Connective tissue in which fat is stored. All adipose tissue in the zebraf synonym: "white adipose tissue" EXACT [] xref: TAO:0002134 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-19T10:04:38Z @@ -24830,9 +24833,9 @@ namespace: zebrafish_anatomy def: "Portion of the pancreatic duct, external to the pancreas body that connects the pancreas with the hepatopancreatic ampulla." [ZFIN:ZDB-PUB-050623-3] xref: TAO:0005346 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2010-03-19T03:17:51Z @@ -24843,8 +24846,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001732 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:13:30Z @@ -24855,8 +24858,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001980 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:31:28Z @@ -24867,8 +24870,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001981 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:31:47Z @@ -24879,8 +24882,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001982 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:32:12Z @@ -24891,8 +24894,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002149 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:32:37Z @@ -24903,8 +24906,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 11. May have hemal arch and rib." [ZFIN:ZDB-PUB-020807-1] xref: TAO:0002152 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:33:09Z @@ -24915,8 +24918,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 9." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002150 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:33:57Z @@ -24927,8 +24930,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 10." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002151 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:34:16Z @@ -24940,8 +24943,8 @@ def: "First lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 1 " EXACT [] xref: TAO:0001754 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:26:13Z @@ -24953,8 +24956,8 @@ def: "Second lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 2" EXACT [] xref: TAO:0001755 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:28:14Z @@ -24966,8 +24969,8 @@ def: "Third lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 3" EXACT [] xref: TAO:0001756 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:28:28Z @@ -24979,8 +24982,8 @@ def: "Fourth lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 4" EXACT [] xref: TAO:0001757 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:09Z @@ -24992,8 +24995,8 @@ def: "Fifth lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 5" EXACT [] xref: TAO:0001758 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:18Z @@ -25005,8 +25008,8 @@ def: "Sixth lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 6" EXACT [] xref: TAO:0001759 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:33Z @@ -25018,8 +25021,8 @@ def: "Seventh lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917 synonym: "dorsal fin ray 7" EXACT [] xref: TAO:0001760 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:52Z @@ -25030,9 +25033,9 @@ namespace: zebrafish_anatomy def: "First proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001818 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005364 ! dorsal fin pterygiophore 1 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:39:57Z @@ -25043,9 +25046,9 @@ namespace: zebrafish_anatomy def: "Second proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001819 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005365 ! dorsal fin pterygiophore 2 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:40:13Z @@ -25057,8 +25060,8 @@ def: "Dorsal fin pterygiophore that is the rostralmost pterygiophore of the dors synonym: "dorsal fin radial 1" EXACT [] xref: TAO:0002094 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:47:57Z @@ -25070,8 +25073,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 1 of the dorsal synonym: "dorsal fin radial 2" EXACT [] xref: TAO:0005365 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:12Z @@ -25083,8 +25086,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 2 of the dorsal f synonym: "dorsal fin radial 3" EXACT [] xref: TAO:0005366 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:36Z @@ -25096,8 +25099,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 3 of the dorsal synonym: "dorsal fin radial 4" EXACT [] xref: TAO:0005367 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:48Z @@ -25109,8 +25112,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 4 of the dorsal synonym: "dorsal fin radial 5" EXACT [] xref: TAO:0005368 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:00Z @@ -25122,8 +25125,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 5 of the dorsal synonym: "dorsal fin radial 6" EXACT [] xref: TAO:0005369 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:26Z @@ -25135,8 +25138,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 6 of the dorsal synonym: "dorsal fin radial 7" EXACT [] xref: TAO:0005370 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:39Z @@ -25148,8 +25151,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 7 of the dorsal synonym: "dorsal fin radial 8" EXACT [] xref: TAO:0005371 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:53:09Z @@ -25160,9 +25163,9 @@ namespace: zebrafish_anatomy def: "First distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005372 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005364 ! dorsal fin pterygiophore 1 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:54:49Z @@ -25173,9 +25176,9 @@ namespace: zebrafish_anatomy def: "Second distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005373 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005365 ! dorsal fin pterygiophore 2 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:55:31Z @@ -25186,9 +25189,9 @@ namespace: zebrafish_anatomy def: "Third distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005374 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005366 ! dorsal fin pterygiophore 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:11Z @@ -25199,9 +25202,9 @@ namespace: zebrafish_anatomy def: "Fourth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005375 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005367 ! dorsal fin pterygiophore 4 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:21Z @@ -25212,9 +25215,9 @@ namespace: zebrafish_anatomy def: "Fifth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005376 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005368 ! dorsal fin pterygiophore 5 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:32Z @@ -25225,9 +25228,9 @@ namespace: zebrafish_anatomy def: "Sixth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005377 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005369 ! dorsal fin pterygiophore 6 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:48Z @@ -25238,9 +25241,9 @@ namespace: zebrafish_anatomy def: "Seventh distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005378 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005370 ! dorsal fin pterygiophore 7 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:04Z @@ -25251,9 +25254,9 @@ namespace: zebrafish_anatomy def: "Eighth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005379 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005371 ! dorsal fin pterygiophore 8 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:19Z @@ -25264,9 +25267,9 @@ namespace: zebrafish_anatomy def: "Third proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005380 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005366 ! dorsal fin pterygiophore 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:39Z @@ -25277,9 +25280,9 @@ namespace: zebrafish_anatomy def: "Fourth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005381 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005367 ! dorsal fin pterygiophore 4 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:08Z @@ -25290,9 +25293,9 @@ namespace: zebrafish_anatomy def: "Fifth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005382 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005368 ! dorsal fin pterygiophore 5 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:20Z @@ -25303,9 +25306,9 @@ namespace: zebrafish_anatomy def: "Sixth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005383 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005369 ! dorsal fin pterygiophore 6 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:30Z @@ -25316,9 +25319,9 @@ namespace: zebrafish_anatomy def: "Seventh proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005384 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005370 ! dorsal fin pterygiophore 7 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:42Z @@ -25329,9 +25332,9 @@ namespace: zebrafish_anatomy def: "Eighth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005385 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005371 ! dorsal fin pterygiophore 8 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:54Z @@ -25343,8 +25346,8 @@ def: "Anatomical space that is an opening in a bone, usually for passage of bloo synonym: "foramina" EXACT PLURAL [] xref: TAO:0001736 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:01:27Z @@ -25355,8 +25358,8 @@ namespace: zebrafish_anatomy def: "Foramen in the occipital region of neurocranium to allow passage of spinal cord." [TAO:curator] xref: TAO:0002045 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:02:49Z @@ -25367,8 +25370,8 @@ namespace: zebrafish_anatomy def: "Anatomical space that is a concavity, shallow depression, or groove on a bone." [TAO:curator] xref: TAO:0001743 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:04:59Z @@ -25379,8 +25382,8 @@ namespace: zebrafish_anatomy def: "Anatomical space that is the external opening of a gill slit connecting the pharyngeal cavity to the exterior. Gill opening is usually paired and located on the lateral or ventral surfaces of the head." [TAO:curator] xref: TAO:0002057 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:06:34Z @@ -25391,9 +25394,9 @@ namespace: zebrafish_anatomy def: "Gill ray is a slender, usually rod-like cartilage within a gill filament and ligamentously tied to its associated pharyngeal arch bone or cartilage." [TAO:curator] xref: TAO:0001856 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:17:01Z @@ -25404,8 +25407,8 @@ namespace: zebrafish_anatomy def: "Lateral line system on head and pectoral girdle." [TAO:WD] xref: TAO:0001873 is_a: ZFA:0001468 ! anterior lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:42:45Z @@ -25416,9 +25419,9 @@ namespace: zebrafish_anatomy def: "Sensory canal associated with the infraorbital bones. Located in close proximity to the otic and supraorbital sensory canals at their union. The infraorbital sensory canal is bilaterally paired. The canal has 3 pores. The first opens dorsally below the nasal sac, the second opens laterally posterior to the anterior maxilary barbel, the third pore is present where infraorbital 1 meets infraorbital 2." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0001811 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2010-04-23T01:44:27Z @@ -25429,9 +25432,9 @@ namespace: zebrafish_anatomy def: "Sensory canal between and in close proximity posteriorly with the post-otic and preoperculo-mandibular sensory canals, and anteriorly with the supraorbital and infraorbital sensory canals. The otic sensory canal is bilaterally paired." [TAO:curator] xref: TAO:0001629 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:45:04Z @@ -25443,9 +25446,9 @@ def: "Sensory canal that forms dorsal to the horizontal semicircular canal of t synonym: "postotic sensory canal" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001619 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:45:48Z @@ -25456,9 +25459,9 @@ namespace: zebrafish_anatomy def: "Sensory canal lateral or ventral to and in close proximity to the otic and post-otic sensory canals at their union. The preoperculo-mandibular sensory canal is bilaterally paired and associated with the preopercle, angular and dentary bones." [TAO:curator] xref: TAO:0001812 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:59:39Z @@ -25469,9 +25472,9 @@ namespace: zebrafish_anatomy def: "Sensory canal contained in the nasal and frontal bones. It contains 4 or 5 neuromast. The first neuromast is positioned in the tubular nasal bone and the other neuromasts are located in the frontal bone. The canal is anterior to and in close proximity to the otic and infraorbital sensory canals. The supraorbital sensory canal is bilaterally paired." [TAO:curator, ZFIN:ZDB-PUB-031103-11] xref: TAO:0001810 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2010-04-23T02:00:48Z @@ -25482,9 +25485,9 @@ namespace: zebrafish_anatomy def: "Nerve that is a branch of cranial nerve VII that passes through or around the suspensorium to innervate muscles and sensory organs on or near pharyngeal arch 2." [TAO:curator] xref: TAO:0002010 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000664 ! cranial nerve VII -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T02:54:34Z @@ -25496,9 +25499,9 @@ def: "Actinotrichium that is part of the anal fin skeleton." [TAO:curator] synonym: "anal fin actinotricia" EXACT PLURAL [] xref: TAO:0000375 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000167 ! anal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:54:17Z @@ -25509,8 +25512,8 @@ namespace: zebrafish_anatomy def: "First lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001769 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:18Z @@ -25521,8 +25524,8 @@ namespace: zebrafish_anatomy def: "Second lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001770 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:31Z @@ -25533,8 +25536,8 @@ namespace: zebrafish_anatomy def: "Third epidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001771 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:43Z @@ -25545,8 +25548,8 @@ namespace: zebrafish_anatomy def: "Fourth lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001772 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:55Z @@ -25557,8 +25560,8 @@ namespace: zebrafish_anatomy def: "Fifth lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001773 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:58:07Z @@ -25569,8 +25572,8 @@ namespace: zebrafish_anatomy def: "Sixth lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001774 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:58:19Z @@ -25581,8 +25584,8 @@ namespace: zebrafish_anatomy def: "Seventh lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001775 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:58:32Z @@ -25594,8 +25597,8 @@ def: "Fossa or chamber on anterior portion of orbital region of neurocranium tha comment: Dbxref for ZFIN changed to match actual database accession number. Old Dbxref ZDB-ANAT-100614-560 correct Dbxref ZDB-ANAT-100614-60. xref: TAO:0001927 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T05:11:17Z @@ -25606,8 +25609,8 @@ namespace: zebrafish_anatomy def: "Barbel that is associated with the anterior nostril. Anterior nasal barbel is paired." [TAO:curator] xref: TAO:0001937 is_a: ZFA:0000622 ! barbel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T05:12:00Z @@ -25620,9 +25623,9 @@ synonym: "ZMB" EXACT [ZFIN:ZDB-PUB-140813-6] xref: TAO:0001938 is_a: ZFA:0000622 ! barbel is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T05:13:52Z @@ -25633,9 +25636,9 @@ namespace: zebrafish_anatomy def: "The dorsal part of the ear. Comprises the three semicircular canals, which connect to the utricle." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005409 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T10:43:19Z @@ -25646,9 +25649,9 @@ namespace: zebrafish_anatomy def: "The ventral portion of the ear. It contains the saccule and the lagena which are the primary auditory organs." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005410 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T10:51:56Z @@ -25659,9 +25662,9 @@ namespace: zebrafish_anatomy def: "Duct that forms when the nonampullary ends of the posterior and anterior semicircular canals merge. The common crus descends connecting the semicircular canals to the horizontal canal." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-010912-7, ZFIN:ZDB-PUB-020403-4] xref: TAO:0005411 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005409 ! pars superior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T11:03:13Z @@ -25672,9 +25675,9 @@ namespace: zebrafish_anatomy def: "Duct that crosses the midline connecting the sacculi." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005412 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: ceri creation_date: 2010-05-17T03:08:14Z @@ -25685,9 +25688,9 @@ namespace: zebrafish_anatomy def: "Portion of organism substance that is an extracellular fluid that has a low potassium concentration." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-7] xref: TAO:0005413 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005459 ! perilymphatic space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T03:11:11Z @@ -25698,10 +25701,10 @@ namespace: zebrafish_anatomy def: "The portion of organism substance that is an extracellular fluid that has a high potassium and sodium concentration. It bathes the hair cells and is thought to be generated by the semicircular canal epithelium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090731-6] xref: TAO:0005414 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005409 ! pars superior ear relationship: part_of ZFA:0005410 ! pars inferior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T03:11:30Z @@ -25712,9 +25715,9 @@ namespace: zebrafish_anatomy def: "Foramen in the inner ear." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005415 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-18T11:11:52Z @@ -25725,8 +25728,8 @@ namespace: zebrafish_anatomy def: "Inner ear foramen that connects the lagena to the caudal half of the saccule." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-020403-4] xref: TAO:0005416 is_a: ZFA:0005415 ! inner ear foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-19T07:13:29Z @@ -25736,8 +25739,8 @@ name: utriculosaccular foramen namespace: zebrafish_anatomy def: "Inner ear foramen that connects the rostral saccula to the utricle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-020403-4] is_a: ZFA:0005415 ! inner ear foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-19T07:15:09Z @@ -25749,8 +25752,8 @@ def: "Opening in the neurocranium to allow communication between the swim bladde synonym: "auditory fenestrae" EXACT PLURAL [] xref: TAO:0002066 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:28:33Z @@ -25761,8 +25764,8 @@ namespace: zebrafish_anatomy def: "Foramen through which cranial nerve VIII (auditory) exits." [TAO:curator] xref: TAO:0001742 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:29:43Z @@ -25773,8 +25776,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the autopalatine and lateral ethmoid and bones. Autopalatine-lateral ethmoid joint is paired." [TAO:curator] xref: TAO:0001608 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:31:28Z @@ -25785,8 +25788,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the autopalatine cartilage or bone and maxilla." [TAO:curator] xref: TAO:0001942 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2010-05-25T05:32:51Z @@ -25797,8 +25800,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates autopalatine and vomer bones. Autopalatine vomer joint is paired." [TAO:curator] xref: TAO:0001784 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:34:03Z @@ -25809,8 +25812,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the basioccipital and exoccipital. Basioccipital exoccipital joint is paired." [TAO:curator] xref: TAO:0002038 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:55:17Z @@ -25822,9 +25825,9 @@ def: "Actinotrichium that is part of the caudal fin skeleton." [TAO:curator] synonym: "caudal fin actinotrichia" EXACT PLURAL [] xref: TAO:0000437 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T06:07:35Z @@ -25835,8 +25838,8 @@ namespace: zebrafish_anatomy def: "A multi-tissue structure that is comprised of a secretory epithelial layer and a connective tissue layer." [http://en.wikipedia.org/wiki/Serous_membrane] xref: TAO:0005425 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-05-26T10:36:36Z @@ -25847,8 +25850,8 @@ namespace: zebrafish_anatomy def: "Foramen that is located in the coracoid." [TAO:curator] xref: TAO:0001737 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T01:35:35Z @@ -25859,8 +25862,8 @@ namespace: zebrafish_anatomy def: "Foramen located on the dentary for passage of the mandibular nerve." [TAO:curator] xref: TAO:0002012 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T01:36:29Z @@ -25872,8 +25875,8 @@ def: "Foramen in the orbital region of the neurocranium for the passage of the o synonym: "optic nerve (II) foramen" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0002025 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:34:08Z @@ -25884,8 +25887,8 @@ namespace: zebrafish_anatomy def: "Foramen for the passage of the olfactory nerve or cranial nerve 1." [TAO:curator] xref: TAO:0001804 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:35:17Z @@ -25896,8 +25899,8 @@ namespace: zebrafish_anatomy def: "Foramen in the bone or cartilage comprising the anterior wall of the orbit, and through which passes at least the deep ophthalmic branch of cranial nerve V (trigeminal)." [TAO:curator] xref: TAO:0002031 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:36:02Z @@ -25908,8 +25911,8 @@ namespace: zebrafish_anatomy def: "Foramen that is located in the scapula. The scapular foramen is paired and formed by a ring of bone." [TAO:curator] xref: TAO:0001735 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:37:13Z @@ -25920,8 +25923,8 @@ namespace: zebrafish_anatomy def: "Foramen through which the superficial ophthalmic nerve passes." [TAO:curator] xref: TAO:0001748 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:38:20Z @@ -25932,8 +25935,8 @@ namespace: zebrafish_anatomy def: "Barbel that originates on the chin." [TAO:curator] xref: TAO:0002024 is_a: ZFA:0000622 ! barbel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T05:43:41Z @@ -25944,8 +25947,8 @@ namespace: zebrafish_anatomy def: "Acellular anatomical structure that is a natural outgrowth, prominence, or point that is part of the surface of a tooth." [TAO:curator] xref: TAO:0001973 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-05-26T06:11:37Z @@ -25957,8 +25960,8 @@ def: "Skeletal element which is a slender, horny, flexible, unsegmented fibril w synonym: "actinotrichia" EXACT PLURAL [] xref: TAO:0000089 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-06-08T04:31:42Z @@ -25968,9 +25971,9 @@ name: pectoral fin nerve namespace: zebrafish_anatomy def: "Nerve that is part of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-20T10:18:37Z @@ -25980,8 +25983,8 @@ name: pectoral fin motor nerve namespace: zebrafish_anatomy def: "Motor nerve that is located in the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005436 ! pectoral fin nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-20T10:19:45Z @@ -25991,8 +25994,8 @@ name: pectoral fin sensory nerve namespace: zebrafish_anatomy def: "Sensory nerve that innervates the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005436 ! pectoral fin nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-20T10:21:38Z @@ -26002,8 +26005,8 @@ name: pectoral fin motor nerve 1 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:22:40Z @@ -26013,8 +26016,8 @@ name: pectoral fin motor nerve 2 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:27:40Z @@ -26024,8 +26027,8 @@ name: pectoral fin motor nerve 3 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and 2 and rostral of nerve 4 and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:28:55Z @@ -26036,8 +26039,8 @@ namespace: zebrafish_anatomy def: "Fossa of opercle that articulates with hyomandibular condyle for opercle." [TAO:curator] xref: TAO:0001928 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-24T02:57:49Z @@ -26048,9 +26051,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is a fluid-filled canal in the integument and usually dermal bones, and contains one or more neuromasts." [TAO:curator] xref: TAO:0001612 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-24T05:31:47Z @@ -26061,8 +26064,8 @@ namespace: zebrafish_anatomy def: "Sensory canal on trunk which is posterior to the pectoral girdle and often reaching to the caudal fin. The trunk sensory canal is bilaterally paired." [TAO:curator] xref: TAO:0001617 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-24T05:39:49Z @@ -26073,8 +26076,8 @@ namespace: zebrafish_anatomy def: "Sensory canal that crosses over the dorsal midline and in close proximity to the contralateral post-otic sensory canals. The supratemporal sensory canal is unpaired." [TAO:curator] xref: TAO:0001630 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T10:45:28Z @@ -26084,9 +26087,9 @@ name: neuromast foramen namespace: zebrafish_anatomy def: "Foramen in a bone that is part of a sensory canal." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005443 ! sensory canal -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-28T10:26:50Z @@ -26097,8 +26100,8 @@ namespace: zebrafish_anatomy def: "Sensory canal that is a side branch between a sensory canal proximally and a pore at its distal end. Sensory canal tubule is bilaterally paired although often imperfectly so." [TAO:curator] xref: TAO:0001933 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T10:46:49Z @@ -26109,9 +26112,9 @@ namespace: zebrafish_anatomy def: "Sensory canal associated with the preopercle bone. It lies in close proximity with the otic and post-otic sensory canals at their union, and anteroventrally with the mandibular sensory canal. The preopercular sensory canal is bilaterally paired." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001813 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2010-06-25T10:58:48Z @@ -26122,8 +26125,8 @@ namespace: zebrafish_anatomy def: "An anatomical space that is an opening, usually at the end of a canal or duct, on the surface of the integument or the lining of an internal anatomical space." [TAO:curator] xref: TAO:0001791 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-28T11:08:35Z @@ -26133,8 +26136,8 @@ name: pectoral fin motor nerve 4 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the ventral side of the fin and innervates the ventral side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-28T01:47:43Z @@ -26145,9 +26148,9 @@ namespace: zebrafish_anatomy def: "Sensory canal associated with the angular and dentary bones. Located anterior and ventral to and in close proximity with the preoperculo-mandibular sensory canal. The mandible sensory canal is bilaterally paired and does not meet at the mandibular symphysis. The mandibular lateral line canal has 3 neuromast located between the canal pores. Two neuromast are located in the portion of the can in the dentary bone. The third neuromast is located in the anguloarticular bone. The rostral end of the canal has a terminal pore adjacent to the mandibular symphysis. There are three more pores, two, at the posterior of the dentary and the anterior of the anguloarticular share a common epithelial pore." [TAO:curator, ZFIN:ZDB-PUB-031103-11] xref: TAO:0001814 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2010-06-25T12:27:58Z @@ -26159,9 +26162,9 @@ def: "Tract which originates from several clusters of cell bodies in the rostral synonym: "TPC" RELATED [ZFIN:ZDB-PUB-961014-1268] synonym: "tract of the posterior commissure" EXACT [ZFIN:ZDB-PUB-961014-421] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000320 ! caudal commissure -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-07-21T01:49:43Z @@ -26172,8 +26175,8 @@ namespace: zebrafish_anatomy def: "Opening in the prootic. The basicapsular fenestra is paired." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "basicapsular fenestrae" EXACT PLURAL [] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T05:40:06Z @@ -26184,8 +26187,8 @@ namespace: zebrafish_anatomy def: "Fossa where the anteromedial rim is formed by the prootic, the remainder of the fossa is formed by the exoccipital and pterotic." [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001974 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T05:47:28Z @@ -26197,8 +26200,8 @@ def: "Foramen formed between the anterolateral extension of the prootic that con synonym: "anterior trigemino-facialis foramen of Howes" EXACT [] synonym: "trigeminal notch of Harrington" EXACT [] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T05:53:27Z @@ -26208,8 +26211,8 @@ name: sinus impar namespace: zebrafish_anatomy def: "Perilymphatic compartment of the zebrafish ear. Chamber positioned ventral of the medulla, the anterior end surrounds the posterior portion of the transverse canal." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-010912-7] is_a: ZFA:0005459 ! perilymphatic space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:01:50Z @@ -26220,8 +26223,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the dorsal hypohyal and urohyal bones. Dorsal hypohyal-urohyal joint is paired." [TAO:curator] xref: TAO:0001847 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:02:25Z @@ -26232,8 +26235,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the dorsal hypohyal and ventral hypohyal bones. Dorsal hypohyal-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001845 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:02:53Z @@ -26243,9 +26246,9 @@ name: perilymphatic space namespace: zebrafish_anatomy def: "Space that contains perilymph." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:03:28Z @@ -26255,8 +26258,8 @@ name: atrium of sinus impar namespace: zebrafish_anatomy def: "Bilaterally paired perilymphatic chambers posterior to the sinus impar. These connect to the anterior end of the otic duct." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-010912-7] is_a: ZFA:0005459 ! perilymphatic space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:06:23Z @@ -26266,8 +26269,8 @@ name: perilymphatic duct namespace: zebrafish_anatomy def: "Duct that contains perilymph." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:15:02Z @@ -26277,8 +26280,8 @@ name: otic duct namespace: zebrafish_anatomy def: "Pair of perilymphatic ducts that extend from the dorsal ends of the atria of the sinus impar, pass on either side of the medulla and merge and extend dorsally toward the surface of the head." [ZFIN:ZDB-PUB-010912-7] is_a: ZFA:0005461 ! perilymphatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:15:52Z @@ -26288,9 +26291,9 @@ name: oral ectoderm namespace: zebrafish_anatomy def: "Ectoderm of the oral region." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0000016 ! ectoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-07-21T03:22:11Z @@ -26301,8 +26304,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the dentary and anguloarticular. Dentary-anguloarticular joint is paired." [TAO:curator] xref: TAO:0001749 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:56:09Z @@ -26313,8 +26316,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and branchiostegal ray bones. Ceratohyal-branchiostegal ray joint is paired." [TAO:curator] xref: TAO:0001850 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:56:35Z @@ -26325,8 +26328,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and ventral hypohyal bones. Ceratohyal-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001844 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:56:50Z @@ -26337,8 +26340,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and dorsal hypohyal bones. Ceratohyal-dorsal hypohyal joint is paired." [TAO:curator] xref: TAO:0001843 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:57:08Z @@ -26349,8 +26352,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the frontal and pterotic. Frontal-pterotic joint is paired." [TAO:curator] xref: TAO:0001711 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:57:53Z @@ -26361,8 +26364,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the hyomandibula bone and metapterygoid bone." [TAO:curator] xref: TAO:0001979 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:58:13Z @@ -26373,8 +26376,8 @@ namespace: zebrafish_anatomy def: "Joint between the right and left coracoid bones of the pectoral girdle." [TAO:curator] xref: TAO:0002040 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:58:45Z @@ -26385,8 +26388,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the left and right basipterygium cartilage or bone. Inter-basipterygium joint is unpaired." [TAO:curator] xref: TAO:0001939 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:59:58Z @@ -26400,9 +26403,9 @@ synonym: "interfrontal suture" EXACT [ZFIN:ZDB-PUB-060323-12] synonym: "metopic suture" RELATED [ZFIN:ZDB-PUB-060323-12] xref: TAO:0001922 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:00Z @@ -26413,8 +26416,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the interhyal and epihyal bones, or interhyal and ceratohyal cartilages. Interhyal-epihyal joint is paired." [TAO:curator] xref: TAO:0001841 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:23Z @@ -26425,8 +26428,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the left and right hypobranchial 3 cartilages or bones. Inter-hypobranchial 3 joint is unpaired." [TAO:curator] xref: TAO:0001863 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:35Z @@ -26437,8 +26440,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the left and right premaxillary bones. Inter-premaxillary joint is unpaired." [TAO:curator] xref: TAO:0001950 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:59Z @@ -26449,8 +26452,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the contralateral ventral hypohyal bones or the contralateral ceratobranchial cartilages. Inter-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001846 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:02:17Z @@ -26461,8 +26464,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the lateral ethmoid and frontal. Lateral ethmoid-frontal joint is paired." [TAO:curator] xref: TAO:0002032 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:02:40Z @@ -26473,8 +26476,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the opercle and interopercle. Opercle-interopercle joint is paired." [TAO:curator] xref: TAO:0001710 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:03:01Z @@ -26485,8 +26488,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the orbitosphenoid cartilage or bone and lateral ethmoid cartilage or bone. Orbitosphenoid-lateral ethmoid joint is paired." [TAO:curator] xref: TAO:0001941 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:03:17Z @@ -26497,8 +26500,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates orbitosphenoid and prootic bones. Orbitosphenoid-prootic joint is paired." [TAO:curator] xref: TAO:0001794 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:03:30Z @@ -26509,8 +26512,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the prootic and exoccipital. Prootic-exoccipital joint is paired." [TAO:curator] xref: TAO:0002034 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:41:27Z @@ -26521,8 +26524,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the prootic and pterosphenoid. Prootic-pterosphenoid joint is paired. The parasphenoid borders the prootic medially in a syndesmosis." [TAO:curator, ZFIN:ZDB-PUB-961014-192] xref: TAO:0002033 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:41:53Z @@ -26533,8 +26536,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the pterosphenoid and orbitosphenoid. Pterosphenoid-orbitosphenoid joint is paired." [TAO:curator] xref: TAO:0001831 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:42:11Z @@ -26546,10 +26549,10 @@ def: "Joint that articulates quadrate and anguloarticular bones. Quadrate-articu synonym: "jaw joint" RELATED [] xref: TAO:0001802 is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0000467 ! anguloarticular relationship: overlaps ZFA:0000621 ! quadrate -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:44:59Z @@ -26560,8 +26563,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates quadrate and hyomandibula bones. Quadrate-hyomandibula joint is paired." [TAO:curator] xref: TAO:0001801 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:45:14Z @@ -26572,8 +26575,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates quadrate and metapterygoid bones. Quadrate-metapterygoid joint is paired." [TAO:curator] xref: TAO:0001803 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:45:27Z @@ -26584,8 +26587,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ventral hypohyal and urohyal bones. Ventral hypohyal-urohyal joint is paired." [TAO:curator] xref: TAO:0001848 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:46:00Z @@ -26598,8 +26601,8 @@ synonym: "dentary symphysis" EXACT [] synonym: "inter-mandibular joint" EXACT [] xref: TAO:0001851 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:55:35Z @@ -26609,9 +26612,9 @@ name: endocardial precursor namespace: zebrafish_anatomy def: "Is a portion of tissue part of the heart primordium which will give rise to the endocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:50:10Z @@ -26621,9 +26624,9 @@ name: myocardial precursor namespace: zebrafish_anatomy def: "Portion of tissue that will develop into the myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:53:48Z @@ -26635,9 +26638,9 @@ def: "Groove that is in the ventral optic cup remnant of the optic fissure." [GO synonym: "optic fissure" RELATED [] is_a: ZFA:0001690 ! groove relationship: develops_from ZFA:0001284 ! optic fissure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2010-07-21T03:00:49Z @@ -26648,8 +26651,8 @@ namespace: zebrafish_anatomy def: "Fossa where the hyomandibula articulates with the sphenotic and prootic to form the hyomandibular-otic region joint." [ZFIN:ZDB-PUB-961014-192] xref: TAO:0002090 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:19:01Z @@ -26661,9 +26664,9 @@ def: "Organ entity that is typically involved in mechanical support and may have xref: TAO:0001890 xref: VSAO:0000128 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000434 ! skeletal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:20:29Z @@ -26674,8 +26677,8 @@ namespace: zebrafish_anatomy def: "Surface structure that is a portion of skin that projects or hangs from the body." [TAO:curator] xref: TAO:0001951 is_a: ZFA:0000368 ! integument -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:21:23Z @@ -26686,9 +26689,9 @@ namespace: zebrafish_anatomy def: "Surface structure that is the region of the head in front of and between the orbits, and above the lower jaw. Nares are located on the snout." [TAO:curator] xref: TAO:0001712 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:22:07Z @@ -26699,8 +26702,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the epihyal and ceratohyal bones. Epihyal-ceratohyal joint is paired." [TAO:curator] xref: TAO:0001842 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:32:09Z @@ -26711,8 +26714,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the epihyal and branchiostegal ray bones. Epihyal-branchiostegal ray joint is paired." [TAO:curator] xref: TAO:0001849 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:32:23Z @@ -26724,9 +26727,9 @@ def: "Fine ridges on surface of scale, often parallel to the circumference of sc synonym: "circuli" EXACT PLURAL [] xref: TAO:0002051 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:33:11Z @@ -26737,8 +26740,8 @@ namespace: zebrafish_anatomy def: "Is a bony partially gas filled sphere located ventral and anterior to the inner ear. The prootic bulla is paired." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0002111 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T02:22:46Z @@ -26751,8 +26754,8 @@ comment: The interopercle ossifies in the interoperculomandibular ligament, whic synonym: "interoperculomandibular ligament" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001687 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:38:04Z @@ -26763,8 +26766,8 @@ namespace: zebrafish_anatomy def: "Lateral ethmoid-autopalatine ligament is a ligament that connects the lateral ethmoid to the autopalatine." [TAO:curator] xref: TAO:0001944 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:38:20Z @@ -26775,8 +26778,8 @@ namespace: zebrafish_anatomy def: "Lateral ethmoid-ectopterygoid ligament is a ligament that connects the lateral ethmoid to the ectopterygoid." [TAO:curator] xref: TAO:0001685 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:38:32Z @@ -26787,8 +26790,8 @@ namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 4 and vertebra 5." [TAO:curator] xref: TAO:0001940 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T01:33:36Z @@ -26799,8 +26802,8 @@ namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses." [TAO:curator] xref: TAO:0002054 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T01:33:50Z @@ -26811,8 +26814,8 @@ namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 6 and vertebra 7." [TAO:curator] xref: TAO:0002055 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T01:34:02Z @@ -26823,8 +26826,8 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure composed of connective tissue that surrounds, the internal portions of the olfactory epithelium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002035 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T11:47:54Z @@ -26835,8 +26838,8 @@ namespace: zebrafish_anatomy def: "Mental barbel that originates on the chin, in an anteromedial position relative to the outer mental barbel. The inner mental barbel is nearer to the mandibular symphysis than is the outer mental barbel." [TAO:curator] xref: TAO:0001969 is_a: ZFA:0005433 ! mental barbel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:08:04Z @@ -26847,9 +26850,9 @@ namespace: zebrafish_anatomy def: "Anatomical cluster that is the upper roof of the mouth that is roofed by bones such as the parasphenoid, prevomer, metapterygoid, orbitosphenoid." [TAO:curator] xref: TAO:0002093 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:10:28Z @@ -26860,8 +26863,8 @@ namespace: zebrafish_anatomy def: "Shallow area that exists on the prootic." [TAO:curator] xref: TAO:0002052 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:30:37Z @@ -26872,8 +26875,8 @@ namespace: zebrafish_anatomy def: "Dermal bone that is ring-shaped or cylindrical and surrounds a sensory canal." [TAO:curator] xref: TAO:0001932 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:32:05Z @@ -26886,8 +26889,8 @@ synonym: "caudal principal lepidotrichium 1 " EXACT [] synonym: "caudal principal ray 1 " EXACT [] xref: TAO:0001713 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:45:32Z @@ -26900,8 +26903,8 @@ synonym: "caudal principal lepidotrichium 3 " EXACT [] synonym: "caudal principal ray 3" EXACT [] xref: TAO:0001715 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:01:02Z @@ -26914,8 +26917,8 @@ synonym: "caudal principal lepidotrichium 2 " EXACT [] synonym: "caudal principal ray 2" EXACT [] xref: TAO:0001714 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:57:40Z @@ -26928,8 +26931,8 @@ synonym: "caudal principal lepidotrichium 4 " EXACT [] synonym: "caudal principal ray 4" EXACT [] xref: TAO:0001716 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:01:37Z @@ -26942,8 +26945,8 @@ synonym: "caudal principal lepidotrichium 5" EXACT [] synonym: "caudal principal ray 5" EXACT [] xref: TAO:0001717 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:04Z @@ -26956,8 +26959,8 @@ synonym: "caudal principal lepidotrichium 6" EXACT [] synonym: "caudal principal ray 6" EXACT [] xref: TAO:0001718 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -26970,8 +26973,8 @@ synonym: "caudal principal lepidotrichium 7" EXACT [] synonym: "caudal principal ray 7" EXACT [] xref: TAO:0001719 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -26984,8 +26987,8 @@ synonym: "caudal principal lepidotrichium 8" EXACT [] synonym: "caudal principal ray 8" EXACT [] xref: TAO:0001720 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -26998,8 +27001,8 @@ synonym: "caudal principal lepidotrichium 9" EXACT [] synonym: "caudal principal ray 9" EXACT [] xref: TAO:0001721 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27012,8 +27015,8 @@ synonym: "caudal principal lepidotrichium 10" EXACT [] synonym: "caudal principal ray 10" EXACT [] xref: TAO:0001722 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27026,8 +27029,8 @@ synonym: "caudal principal lepidotrichium 11" EXACT [] synonym: "caudal principal ray 11" EXACT [] xref: TAO:0001723 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27040,8 +27043,8 @@ synonym: "caudal principal lepidotrichium 12" EXACT [] synonym: "caudal principal ray 12" EXACT [] xref: TAO:0001724 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27054,8 +27057,8 @@ synonym: "caudal principal lepidotrichium 14" EXACT [] synonym: "caudal principal ray 14" EXACT [] xref: TAO:0001726 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27068,8 +27071,8 @@ synonym: "caudal principal lepidotrichium 15" EXACT [] synonym: "caudal principal ray 15" EXACT [] xref: TAO:0001727 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27082,8 +27085,8 @@ synonym: "caudal principal lepidotrichium 16" EXACT [] synonym: "caudal principal ray 16" EXACT [] xref: TAO:0001728 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27096,8 +27099,8 @@ synonym: "caudal principal lepidotrichium 17" EXACT [] synonym: "caudal principal ray 17" EXACT [] xref: TAO:0001729 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27110,8 +27113,8 @@ synonym: "caudal principal lepidotrichium 18" EXACT [] synonym: "caudal principal ray 18" EXACT [] xref: TAO:0001730 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27124,8 +27127,8 @@ synonym: "caudal principal lepidotrichium 19" EXACT [] synonym: "caudal principal ray 19" EXACT [] xref: TAO:0001731 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27136,8 +27139,8 @@ namespace: zebrafish_anatomy def: "Scale that is associated with the lateral line sensory canal." [TAO:curator] xref: TAO:0001824 is_a: ZFA:0000277 ! scale -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:49:27Z @@ -27148,8 +27151,8 @@ namespace: zebrafish_anatomy def: "The bony shelf above orbit is an anatomical cluster formed by the dorsolateral portions of the lateral ethmoid, frontal and sphenotic bones that forms the dorsal margin of the orbit." [TAO:curator] xref: TAO:0001686 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:52:58Z @@ -27160,8 +27163,8 @@ namespace: zebrafish_anatomy def: "Dermal bone that is located on or subjacent to the surface anywhere on the body and that is not part of the general complement of scales, dermal bone of the dermatocranium, postcranial axial skeleton or paired fin skeleton. Bony plate may exist singly, or as unpaired or paired clusters or series." [TAO:curator] xref: TAO:0002053 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:53:33Z @@ -27172,8 +27175,8 @@ namespace: zebrafish_anatomy def: "Caudal fin lepidotrichium that is distally branched." [TAO:curator] xref: TAO:0002062 is_a: ZFA:0001550 ! caudal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:55:31Z @@ -27184,8 +27187,8 @@ namespace: zebrafish_anatomy def: "Dorsal fin ray that is distally branched." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001785 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:55:54Z @@ -27197,8 +27200,8 @@ def: "Anal fin lepidotrichium that is distally branched." [TAO:curator] synonym: "anal fin branched ray" EXACT [] xref: TAO:0001992 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:56:47Z @@ -27209,9 +27212,9 @@ namespace: zebrafish_anatomy def: "Anatomical space between bones of the neurocranium. Frequently closes during development." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001738 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:27:16Z @@ -27222,8 +27225,8 @@ namespace: zebrafish_anatomy def: "Fontanel within the frontal bone near the frontal-sphenotic joint. Lateral fontanel of frontal is paired." [TAO:curator] xref: TAO:0002011 is_a: ZFA:0005536 ! fontanel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:28:46Z @@ -27234,8 +27237,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the first centrum." [TAO:curator] xref: TAO:0001879 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:29:54Z @@ -27246,8 +27249,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the second centrum." [TAO:curator] xref: TAO:0001878 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:06Z @@ -27258,8 +27261,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the third centrum." [TAO:curator] xref: TAO:0001880 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:18Z @@ -27270,8 +27273,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the fourth centrum." [TAO:curator] xref: TAO:0001881 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:34Z @@ -27282,8 +27285,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the fifth centrum." [TAO:curator] xref: TAO:0001751 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:51Z @@ -27294,8 +27297,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the sixth centrum." [TAO:curator] xref: TAO:0001750 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:31:02Z @@ -27307,8 +27310,8 @@ def: "Joint that articulates the hyomandibular cartilage or bone and otic region synonym: "hyomandibula-sphenotic-prootic joint" EXACT [] xref: TAO:0001947 is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:38:51Z @@ -27319,9 +27322,9 @@ namespace: zebrafish_anatomy def: "Actinotrichium that is part of the pectoral fin." [TAO:curator] xref: TAO:0000544 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:50:19Z @@ -27332,9 +27335,9 @@ namespace: zebrafish_anatomy def: "Actinotrichium that is part of the pelvic fin." [TAO:curator] xref: TAO:0000596 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:50:46Z @@ -27345,8 +27348,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium 1 is the leading or marginal ray of the fin and articulates with the scapula. Lepidotrichium 1 is commonly segmented but unbranched." [TAO:curator] xref: TAO:0001761 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:55:24Z @@ -27357,8 +27360,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the second most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001762 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:58:18Z @@ -27369,8 +27372,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the third most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001763 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:58:24Z @@ -27381,8 +27384,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the sixth most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001766 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:08Z @@ -27393,8 +27396,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the seventh most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001767 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:13Z @@ -27405,8 +27408,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the fifth most anterior pectoral ray , usually branched and segmented." [TAO:curator] xref: TAO:0001765 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:20Z @@ -27417,8 +27420,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the fourth most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001764 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:26Z @@ -27429,8 +27432,8 @@ namespace: zebrafish_anatomy def: "First lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001776 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:13:56Z @@ -27441,8 +27444,8 @@ namespace: zebrafish_anatomy def: "Second lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001777 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:15:37Z @@ -27453,8 +27456,8 @@ namespace: zebrafish_anatomy def: "Fourth lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001779 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:15:48Z @@ -27465,8 +27468,8 @@ namespace: zebrafish_anatomy def: "Third lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001778 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:15:48Z @@ -27477,8 +27480,8 @@ namespace: zebrafish_anatomy def: "Anatomical space that is the concavity containing the eye." [TAO:curator] xref: TAO:0001967 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:17:20Z @@ -27489,9 +27492,9 @@ namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "angiogenic sprout" RELATED [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-09-23T05:54:14Z @@ -27502,8 +27505,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the parasphenoid and basioccipital. Parasphenoid-basioccipital joint is paired." [TAO:curator] xref: TAO:0001832 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-09-24T11:52:49Z @@ -27516,9 +27519,9 @@ synonym: "vitreous body" EXACT [] synonym: "vitreous humor" EXACT [] xref: TAO:0002290 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-10T01:16:52Z @@ -27529,9 +27532,9 @@ namespace: zebrafish_anatomy def: "Acellular anatomical structure that is the innermost layer of the optic choroid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070614-11] synonym: "vitreous lamina" EXACT [] is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-10T02:16:43Z @@ -27542,9 +27545,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that composes the opaque fibrous outer layer of the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] xref: TAO:0002289 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-11-11T10:53:23Z @@ -27555,9 +27558,9 @@ namespace: zebrafish_anatomy def: "Clear ocular fluid in the anterior segment of the eye. It is produced primarily by dorsal ciliary epithelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] xref: TAO:0002288 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005876 ! anterior chamber eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-11T11:10:25Z @@ -27569,8 +27572,8 @@ def: "A specialized hair cell that has an elongated kinocilium upon which an oto subset: cell_slim xref: CL:0002450 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-11T01:59:44Z @@ -27580,9 +27583,9 @@ name: anterior segment eye namespace: zebrafish_anatomy def: "Anatomical cluster comprising the rostral portion of the eye; the cornea, lens, iris, ciliary zone, anterior chamber, and annular ligament." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-11T05:44:57Z @@ -27592,9 +27595,9 @@ name: posterior segment eye namespace: zebrafish_anatomy def: "Anatomical cluster comprising the caudal portion of the eye: the retina, posterior chamber, optic choroid, and vitreous." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-12T11:52:42Z @@ -27604,9 +27607,9 @@ name: iris blood vessels namespace: zebrafish_anatomy def: "Blood vessels within the stroma of the iris. The vessels cluster and are more dense at the base of the stroma where the iris is thicker." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001079 ! blood vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-12-01T02:00:15Z @@ -27616,9 +27619,9 @@ name: iris stroma namespace: zebrafish_anatomy def: "Portion of the iris which contains bundles of fibers, most of which are oriented radially around the pupil. The stroma is innervated by the iris blood vessels and develops from the periocular mesenchyme." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-12-01T02:28:06Z @@ -27628,9 +27631,9 @@ name: corneo-scleral junction namespace: zebrafish_anatomy def: "The line where the cornea and the sclera meet." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090309-8] is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-12T03:45:32Z @@ -27640,9 +27643,9 @@ name: ventral canal eye namespace: zebrafish_anatomy def: "Duct present in the angle where the cornea meets the ciliary zone that absorbs the aqueous humor." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-11-12T03:51:50Z @@ -27652,8 +27655,8 @@ name: periocular mesenchyme namespace: zebrafish_anatomy def: "Head mesenchyme surrounding the immature eye that gives rise to specialized structures of the anterior segment of the eye." [ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-12-02T12:29:18Z @@ -27665,9 +27668,9 @@ def: "Modified or toughened vitreous that suspend the lens at the equator to the synonym: "zonules" EXACT PLURAL [] is_a: ZFA:0001487 ! portion of organism substance relationship: develops_from ZFA:0005561 ! vitreous -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-12-02T06:08:45Z @@ -27677,9 +27680,9 @@ name: lens capsule namespace: zebrafish_anatomy def: "The lens capsule is a modified basement membrane that completely surrounds the ocular lens." [GOC:cvs, ORCiD:0000-0002-2244-7917, PMID:18773892] is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-12-03T11:36:36Z @@ -27690,9 +27693,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that are compact accumulations of neurons having roughly similar connections and functions." [GOC:mh, ISBN:0878937420, ORCiD:0000-0001-9114-8737] synonym: "brain nuclei" EXACT PLURAL [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-01-28T05:31:14Z @@ -27702,9 +27705,9 @@ name: ventral thalamus nucleus namespace: zebrafish_anatomy def: "Brain nuclei located in the ventral thalamus." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-02-24T04:49:33Z @@ -27713,9 +27716,9 @@ id: ZFA:0005577 name: tegmental nucleus namespace: zebrafish_anatomy is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-02-24T04:54:52Z @@ -27725,9 +27728,9 @@ name: spinal nerve root namespace: zebrafish_anatomy def: "The multi-tissue structure that is the beginning of the spinal nerve leaving the spinal cord." [http://en.wikipedia.org/wiki/Nerve_root] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-03-04T05:17:42Z @@ -27739,9 +27742,9 @@ def: "Integument ionocyte rich in Na-Cl co-transporter (NCC) activity." [ZFIN:ZD subset: cell_slim synonym: "NCC cell" EXACT [] is_a: ZFA:0005325 ! integument ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-03-07T02:03:05Z @@ -27752,9 +27755,9 @@ namespace: zebrafish_anatomy def: "Rostral portion of pars anterior of the adenohypophysis where corticotropes and lactotropes localize." [ZFIN:ZDB-PUB-080616-4] synonym: "rostral pars distalis" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001195 ! pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2011-04-13T11:44:33Z @@ -27765,9 +27768,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of pars anterior of the adenohypophysis where somatotropes, thyrotropes and gonadotropes are localized. The proximal pars anterior has functional homology to the mammalian pars tuberalis, secreting the same hormones." [ZFIN:ZDB-PUB-080616-4] synonym: " proximal pars distalis" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001195 ! pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2011-04-13T02:37:52Z @@ -27777,8 +27780,8 @@ name: dorsal proneural cluster namespace: zebrafish_anatomy def: "Cluster of cells along the edge of the neural plate that have the potential to become neuroblast." [ZFIN:ZDB-PUB-990921-1] is_a: ZFA:0000068 ! proneural cluster -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2011-04-14T02:02:16Z @@ -27788,8 +27791,8 @@ name: ventral proneural cluster namespace: zebrafish_anatomy def: "Cluster of cells along the center of the neural plate that have the potential to become neuroblast." [ZFIN:ZDB-PUB-990921-1] is_a: ZFA:0000068 ! proneural cluster -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2011-04-14T02:02:55Z @@ -27799,8 +27802,8 @@ name: developing mesonephric nephron namespace: zebrafish_anatomy def: "Anatomical cluster which give rise to mature mesonephric nephrons. Zebrafish continously generate new mesonephric nephrons." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005282 ! nephron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T04:10:09Z @@ -27810,11 +27813,11 @@ name: developing mesonephric proximal tubule namespace: zebrafish_anatomy def: "Renal duct that will develop into the mesonephric proximal tubule." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule relationship: part_of ZFA:0005584 ! developing mesonephric nephron relationship: part_of ZFA:0005590 ! capillary loop nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-27T10:55:07Z @@ -27827,8 +27830,8 @@ synonym: "stage I nephron" EXACT [] is_a: ZFA:0001477 ! portion of tissue is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005587 ! nephron progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T04:25:56Z @@ -27838,9 +27841,9 @@ name: nephron progenitor namespace: zebrafish_anatomy def: "Cluster of cells comprising a portion of tissue which gives rise to new mesonephric nephrons. The cluster contains self-renewing stem cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-110131-33] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2011-04-26T04:26:56Z @@ -27851,8 +27854,8 @@ namespace: zebrafish_anatomy def: "Developing nephron with a comma shaped appearance." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-110131-33] is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005586 ! renal vesicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T04:41:04Z @@ -27864,8 +27867,8 @@ def: "Developing nephron with a tubular morphology that has a renal corpuscle an synonym: "stage II nephron" RELATED [] is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005588 ! comma-shaped body -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T05:07:54Z @@ -27876,8 +27879,8 @@ namespace: zebrafish_anatomy def: "Developing nephron where the developing glomerular capsule has been invaded by a glomerular capillary loop called the glomerular tuft." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005589 ! s-shaped body -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T05:45:15Z @@ -27887,11 +27890,11 @@ name: developing mesonephric distal tubule namespace: zebrafish_anatomy def: "Renal duct that will develop into the mesonephric distal tubule." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule relationship: part_of ZFA:0005584 ! developing mesonephric nephron relationship: part_of ZFA:0005590 ! capillary loop nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-27T10:55:41Z @@ -27903,8 +27906,8 @@ def: "A branched nephron of the mature kidney." [ZFIN:ZDB-PUB-110131-33] synonym: "stage IV nephron" EXACT [] is_a: ZFA:0005282 ! nephron relationship: develops_from ZFA:0005584 ! developing mesonephric nephron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-27T12:15:19Z @@ -27914,9 +27917,9 @@ name: neuraxis flexure namespace: zebrafish_anatomy def: "An anatomical structure that is regional part of the central nervous system where there is a significant bend of the axis." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-05-02T01:03:43Z @@ -27927,8 +27930,8 @@ namespace: zebrafish_anatomy def: "Non-material anatomical entity of two dimensions, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures." [CARO:MAH, ORCiD:0000-0001-9114-8737] xref: CARO:0000010 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ZFIN creation_date: 2011-03-22T10:34:12Z @@ -27941,8 +27944,8 @@ synonym: "caudal principal lepidotrichium 13" EXACT [] synonym: "caudal principal ray 13" EXACT [] xref: TAO:0001725 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-04T02:44:32Z @@ -27954,8 +27957,8 @@ def: "Fin that is one of a pair located ventrally on the organism." [TAO:curator xref: TAO:0002278 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0001383 ! fin bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-11-11T11:22:21Z @@ -27967,8 +27970,8 @@ def: "Fin that is an unpaired fin located in the sagittal plane of the organism. xref: TAO:0002276 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0000040 ! median fin fold -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-11T11:33:02Z @@ -27983,9 +27986,9 @@ subset: cell_slim synonym: "pancreatic E cell" EXACT [] xref: CL:0005019 is_a: ZFA:0005599 ! ghrelin secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001249 ! exocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-17T01:02:01Z @@ -27998,8 +28001,8 @@ def: "A cell that secretes ghrelin, the peptide hormone that stimulates hunger." subset: cell_slim xref: CL:0005018 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-17T01:03:24Z @@ -28009,10 +28012,10 @@ name: sinoatrial region namespace: zebrafish_anatomy def: "Region at venious pole of heart tube that initiates heart beat." [ZFIN:ZDB-PUB-101115-23] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-22T04:14:44Z @@ -28023,10 +28026,10 @@ namespace: zebrafish_anatomy def: "Ring of cardiac conduction tissue around the sinoatrial region of the heart tube that performs pacemaker function." [ZFIN:ZDB-PUB-101115-23] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005600 ! sinoatrial region -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000114 ! heart relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2011-11-22T04:16:19Z @@ -28036,8 +28039,8 @@ name: supraneural 10 namespace: zebrafish_anatomy def: "Supraneural located posterior to supraneural 9. This supraneural does not appear in most specimens." [ZFIN:ZDB-PUB-031103-13] is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: jonknight creation_date: 2011-12-05T12:56:49Z @@ -28047,8 +28050,8 @@ name: lymphangiogenic sprout namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new lymph vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100719-62] is_a: ZFA:0005559 ! vascular sprouts -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-12-27T12:39:43Z @@ -28058,8 +28061,8 @@ name: angiogenic sprout namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new blood vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005559 ! vascular sprouts -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-12-27T12:41:09Z @@ -28071,8 +28074,8 @@ def: "The primordial vasculature that will develop into lymph vessels. The lymp synonym: "parachordal lymphangioblast string" EXACT [ZFIN:ZDB-PUB-110613-5] is_a: ZFA:0005076 ! primordial vasculature relationship: develops_from ZFA:0000477 ! posterior cardinal vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2011-12-27T12:45:30Z @@ -28086,9 +28089,9 @@ synonym: "calvaria" EXACT PLURAL [] synonym: "calvarium" EXACT [] synonym: "skullcap" RELATED [] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T12:33:01Z @@ -28100,9 +28103,9 @@ def: "Fibrous joint connecting the parietal bones." [GOC:cvs, ORCiD:0000-0002-22 synonym: "sagittal suture" RELATED [] xref: TAO:0005245 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T02:35:47Z @@ -28114,9 +28117,9 @@ def: "Fibrous joint connecting the frontal bone to the parietal bone. This join synonym: "coronal suture" RELATED [] xref: TAO:0005255 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T02:37:39Z @@ -28128,9 +28131,9 @@ def: "Fibrous joint connecting the supraoccipital to the parietal bone." [GOC:cv synonym: "lamdoid suture" RELATED [ZFIN:ZDB-PUB-060323-12] xref: TAO:0005264 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T02:48:16Z @@ -28140,8 +28143,8 @@ name: synostosis namespace: zebrafish_anatomy def: "Joint in which the articulating bones are connected by bone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:09:13Z @@ -28152,8 +28155,8 @@ namespace: zebrafish_anatomy def: "Synostosis where the entopterygoid meets the quadrate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "ectopterygoid-quadrate synostosis" EXACT [] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:28:11Z @@ -28164,8 +28167,8 @@ namespace: zebrafish_anatomy def: "Synostosis where the ectopterygoid meets the entopterygoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "ectopterygoid-entopterygoid synostosis" EXACT [] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:31:09Z @@ -28175,8 +28178,8 @@ name: basioccipital-prootic joint namespace: zebrafish_anatomy def: "Synchondrosis where the basioccipital meets the prootic anteriorly." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-31T03:48:07Z @@ -28187,8 +28190,8 @@ namespace: zebrafish_anatomy def: "Synostosis where the entopterygoid meets the metapterygoid. The metapterygoid has an anterodorsally projecting spine that meets the entopterygoid medially in a synostosis at its posteromedial edge." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "entopterygoid-metapterygoid synostosis" EXACT [] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:45:11Z @@ -28198,8 +28201,8 @@ name: metapterygoid-symplectic fenestra namespace: zebrafish_anatomy def: "Opening formed between the ventral border of the metapterygoid and the dorsal border of the symplectic." [ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:53:50Z @@ -28209,8 +28212,8 @@ name: quadrate-entopterygoid joint namespace: zebrafish_anatomy def: "Synchondrosis where the quadrate meets the entopterygoid dorsally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:57:23Z @@ -28220,8 +28223,8 @@ name: lateral ethmoid-supraethmoid namespace: zebrafish_anatomy def: "Synostosis where anteromedial extensions of the lateral ethmoid project to meet the supraethmoid dorsally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T11:27:00Z @@ -28231,8 +28234,8 @@ name: anguloarticular-retroarticular joint namespace: zebrafish_anatomy def: "Cartilaginous joint that articulates the anguloarticular posteroventrally with the retroarticular." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T11:51:45Z @@ -28243,9 +28246,9 @@ namespace: zebrafish_anatomy def: "Connective tissue that functions in mechanical and structural support." [VSAO:curator] xref: VSAO:0000015 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000434 ! skeletal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T03:59:26Z @@ -28256,8 +28259,8 @@ namespace: zebrafish_anatomy def: "A skeletal element that has the potential to participate in endochondral ossification, and may participate in intramembranous ossification." [VSAO:curator] xref: VSAO:0000139 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T02:36:59Z @@ -28268,8 +28271,8 @@ namespace: zebrafish_anatomy def: "Skeletal tissue with a collagen-rich extracellular matrix vascularized, mineralized with hydroxyapatite and typically including osteocytes located in lacunae that communicate with one another by cell processes (in canaliculi). Bone is deposited by osteoblasts." [VSAO:curator] xref: VSAO:0000047 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T04:00:34Z @@ -28280,8 +28283,8 @@ namespace: zebrafish_anatomy def: "Skeletal tissue that is avascular, rich in glycosaminoglycans (GAGs) and typically includes chondrocytes within isolated lacunae. Cartilage tissue is deposited by chondroblasts." [VSAO:curator] xref: VSAO:0000040 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T04:01:46Z @@ -28292,8 +28295,8 @@ namespace: zebrafish_anatomy def: "Skeletal tissue that is part of the exoskeleton and derived from an odontogenic papilla." [VSAO:curator] xref: VSAO:0000063 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T04:05:11Z @@ -28303,8 +28306,8 @@ name: replacement element namespace: zebrafish_anatomy def: "Skeletal element that forms as a replacement or substitution of another element or tissue." [TAO:curator] is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-14T12:37:44Z @@ -28316,8 +28319,8 @@ def: "Space enclosed by the trabeculae cranii. The anterior tip of the notochor synonym: "hypophyseal fenestrae" EXACT PLURAL [] xref: TAO:0005269 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2012-03-15T03:52:38Z @@ -28328,8 +28331,8 @@ namespace: zebrafish_anatomy def: "Synovial joint that articulates the hyomandibula and the opercle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0005265 is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:19:50Z @@ -28339,8 +28342,8 @@ name: hyomandibula-pterotic joint namespace: zebrafish_anatomy def: "Synovial joint that articulates the hyomandibula with the pterotic." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:14:40Z @@ -28352,8 +28355,8 @@ def: "Fossa where the exoccipital forms the medial portion and the epioccipital synonym: "temporal fossa" EXACT [] xref: TAO:0001753 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:23:27Z @@ -28367,8 +28370,8 @@ synonym: "facial nerve foramen" EXACT [ZFIN:ZDB-PUB-961014-192] synonym: "hyosymplectic foramen" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0005275 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:32:30Z @@ -28379,8 +28382,8 @@ namespace: zebrafish_anatomy def: "Fossa on the pterotic where the hyomandibula articulates." [ZFIN:ZDB-PUB-961014-192] xref: TAO:0005266 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:35:40Z @@ -28391,8 +28394,8 @@ namespace: zebrafish_anatomy def: "Fibrous joint that articulates the posterior edge of the preopercle horizontal limb with the symplectic." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0005268 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-20T05:02:00Z @@ -28403,8 +28406,8 @@ namespace: zebrafish_anatomy def: "Fibrous joint that articulates the anterior edge of the preopercle vertical limb and the hyomandibula." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0005278 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-20T05:04:12Z @@ -28414,10 +28417,10 @@ name: lepidotrichium segment namespace: zebrafish_anatomy def: "Skeletal element which is part of lepidotrichium articulating with other lepidotrichium segments by lepidotrichium joints." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005634 ! lepidotrichium joint relationship: part_of ZFA:0001554 ! lepidotrichium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-06T02:21:01Z @@ -28428,9 +28431,9 @@ namespace: zebrafish_anatomy def: "Joint that articulates segments of the fin ray." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-000803-4] synonym: "intra-ray joint" EXACT [] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001554 ! lepidotrichium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-06T02:22:29Z @@ -28442,8 +28445,8 @@ def: "Odontoid tissue formed of a loose matrix of collagen. The fibrils of the synonym: "pre-dentine" EXACT [] synonym: "predentin" EXACT [] is_a: ZFA:0005623 ! odontoid tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-19T02:42:59Z @@ -28453,9 +28456,9 @@ name: interossicular ligament namespace: zebrafish_anatomy def: "Ligament that connects the intercalarium to the anterior process of the tripus and the scaphium." [ZFIN:ZDB-PUB-031103-13, ZFIN:ZDB-PUB-120214-1] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-19T04:04:31Z @@ -28466,8 +28469,8 @@ namespace: zebrafish_anatomy def: "Ligament that connects one rib to another." [TAO:curator] xref: TAO:0001972 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-19T04:20:23Z @@ -28479,8 +28482,8 @@ def: "Ligaments that runs from the parapophyses of the anteriormost centrum to t synonym: "Baudelot's ligaments" EXACT [] synonym: "scapulo-vertebral ligaments" EXACT PLURAL [] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T12:23:51Z @@ -28491,8 +28494,8 @@ namespace: zebrafish_anatomy def: "Ligament that runs from the ventral third of the supracleithrum to the exoccipital." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "Baudelot's ligament" EXACT [] is_a: ZFA:0005638 ! scapulo-vertebral ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T12:25:49Z @@ -28503,8 +28506,8 @@ namespace: zebrafish_anatomy def: "Ligament that run from the dorsal tip of the cleithrum to the exoccipital." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "Baudelot's ligament" EXACT [] is_a: ZFA:0005638 ! scapulo-vertebral ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T12:26:31Z @@ -28514,8 +28517,8 @@ name: maxillo-mandibular ligament namespace: zebrafish_anatomy def: "Ligament that connects the dentary to the maxilla." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:00:12Z @@ -28525,8 +28528,8 @@ name: maxillo-rostroid ligament namespace: zebrafish_anatomy def: "Ligament that connects the rostral process of the maxilla to the kinethmoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:00:52Z @@ -28536,8 +28539,8 @@ name: premaxillo-rostroid ligament namespace: zebrafish_anatomy def: "Ligament that, in the adult, attaches the premaxilla to its counterpart at the midline and the kinethmoid posterodorsally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:03:14Z @@ -28547,8 +28550,8 @@ name: ceratobranchial 5 ligament namespace: zebrafish_anatomy def: "The ligament that connects the anteroventral tips of ceratobranchials 5 medially." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:03:58Z @@ -28558,8 +28561,8 @@ name: supracleithrum-intercalar ligament namespace: zebrafish_anatomy def: "Short ligament that runs from the hooked anterior end of the supracleithrum to the intercalar." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:04:45Z @@ -28569,8 +28572,8 @@ name: preopercle-retroarticular ligament namespace: zebrafish_anatomy def: "Ligament that connects the preopercle to the retroarticular anteroventrally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:05:19Z @@ -28581,8 +28584,8 @@ namespace: zebrafish_anatomy def: "Dense regular connective tissue that connects muscle to bone." [VSAO:curator] xref: VSAO:0000073 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T02:02:48Z @@ -28593,8 +28596,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the mesethmoid and lateral ethmoid. Mesethmoid-lateral ethmoid joint is paired." [TAO:curator, ZFIN:ZDB-PUB-961014-192] xref: TAO:0001679 is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T05:24:57Z @@ -28605,8 +28608,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the mesethmoid and vomer. Mesethmoid-vomer joint is unpaired." [TAO:curator] xref: TAO:0001680 is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T05:26:11Z @@ -28616,9 +28619,9 @@ name: primitive pectoral fin adductor namespace: zebrafish_anatomy def: "Adductor that originates at the cleithrum the muscle fibers run in sheets along the endoskeletal disk extending dorsally and caudally from its base. Distally, the muscles insert onto the fin membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050920-7] is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2012-05-08T03:51:06Z @@ -28628,8 +28631,8 @@ name: primitive pectoral fin abductor namespace: zebrafish_anatomy def: "Abductor that originates at the cleithrum the muscle fibers run in sheets along the endoskeletal disk extending dorsally and caudally from its base. Distally, the muscles insert onto the fin membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050920-7] is_a: ZFA:0005269 ! abductor muscle -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-05-08T03:59:41Z @@ -28640,8 +28643,8 @@ namespace: zebrafish_anatomy def: "Layers of broad flat tendons." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "aponeuroses" EXACT PLURAL [] is_a: ZFA:0005647 ! tendon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-06-15T10:41:21Z @@ -28652,9 +28655,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue in the vagal lobe that contains GABAergic sensory interneurons." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120409-2] is_a: ZFA:0000297 ! vagal lobe is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-07-03T01:25:32Z @@ -28664,9 +28667,9 @@ name: blood plasma namespace: zebrafish_anatomy def: "Portion of organism substance that is the liquid matrix of blood." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000007 ! blood -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-09-25T10:30:55Z @@ -28676,9 +28679,9 @@ name: anterior ventromedial process of autopalatine namespace: zebrafish_anatomy def: "Endochondral process of the autopalatine that forms the socket of the autopalatine-preethmoid joint." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001637 ! bony projection -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000620 ! autopalatine -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2012-09-25T03:42:27Z @@ -28688,8 +28691,8 @@ name: autopalatine-preethmoid joint namespace: zebrafish_anatomy def: "Synovial, ball and socket joint that articulates the autopalatine and the preethmoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-09-25T03:47:27Z @@ -28699,9 +28702,9 @@ name: anterior lateral process of autopalatine namespace: zebrafish_anatomy def: "Endochondral bone part of autopalatine that extends towards the first infraorbital." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001637 ! bony projection -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000620 ! autopalatine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-09-25T03:55:15Z @@ -28711,9 +28714,9 @@ name: lymph namespace: zebrafish_anatomy def: "Portion of organism substance found in the lymphatic system. Lymph usually consists of interstitial fluid that has made its way into the lymphatic system." [GOC:cvs, ORCiD:0000-0002-2244-7917, UBERON:curator] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000385 ! lymphatic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-11-28T03:32:48Z @@ -28723,9 +28726,9 @@ name: intestinal lamina propria mucosa namespace: zebrafish_anatomy def: "Thin layer of loose connective tissue which lies beneath the intestinal epithelium. The intestinal lamina propria is less complex then the corresponding mammalian tissue." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050120-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005660 ! intestinal mucosa -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-07T12:15:28Z @@ -28735,9 +28738,9 @@ name: intestinal mucosa namespace: zebrafish_anatomy def: "Multi-tissue structure of the intestine comprising of the intestinal epithelium and the intestinal lamina propria mucosa." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050120-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-07T12:18:22Z @@ -28748,9 +28751,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the olfactory bulb that is roughly spheroidal and encircled by olfactory sensory neuron axons that formed an anatomically distinct stalk connected to the olfactory nerve." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-03-19T02:15:11Z @@ -28760,9 +28763,9 @@ name: spinal nerve namespace: zebrafish_anatomy def: "Bilaterally-paired nerve connecting each segment of the spinal cord to the limbs and organs." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:04:36Z @@ -28773,8 +28776,8 @@ namespace: zebrafish_anatomy def: "Dorsal branch of the spinal nerve, coursing dorsally and caudally between the muscle and the vertebrae. It remains in the center of the muscle segment and could be followed to the dorsal aspect of the muscle. MiP primary motoneuron axons extend in this branch." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] synonym: "dorsal nerve" EXACT [] is_a: ZFA:0005662 ! spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:08:16Z @@ -28785,8 +28788,8 @@ namespace: zebrafish_anatomy def: "Ventral branch of the spinal nerve that projects toward the lateral surface of the myotome, initially extending parallel to the horizontal myoseptum. RoP primary motoneuron axons extend in this branch." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] synonym: "lateral nerve" EXACT [] is_a: ZFA:0005662 ! spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:09:27Z @@ -28797,8 +28800,8 @@ namespace: zebrafish_anatomy def: "Ventral spinal nerve branch that projects to the ventral myotome. The axon of the CaP primary motoneuron extends in this branch." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247] synonym: "ventral nerve" EXACT [] is_a: ZFA:0005662 ! spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:11:19Z @@ -28808,8 +28811,8 @@ name: ventral spinal nerve septal branch namespace: zebrafish_anatomy def: "Ventral spinal nerve sub-branch that runs near the rostral end of the myotome near the vertical myoseptum." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247] is_a: ZFA:0005665 ! ventral spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:13:53Z @@ -28819,8 +28822,8 @@ name: ventral spinal nerve median branch namespace: zebrafish_anatomy def: "Ventral spinal nerve sub-branch that projects ventrally in the rostro-caudal center of the myotome. The axon of the CaP primary motoneuron extends in this branch." [ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] is_a: ZFA:0005665 ! ventral spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:14:46Z @@ -28831,9 +28834,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the olfactory bulb comprised of ciliated and microvillous olfactory sensory neurons projections that form specialized neuropilar regions comprised of olfactory sensor axons and the dendrites of olfactory bulb neurons." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120330-2] synonym: "glomerular precursors" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T11:55:43Z @@ -28844,9 +28847,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. The neurons composing lateral protoglomeruli respond to amino acid stimuli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "lateral protoglomeruli" EXACT PLURAL [] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T01:58:36Z @@ -28856,9 +28859,9 @@ name: central zone protoglomerulus namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:06:50Z @@ -28868,9 +28871,9 @@ name: medial protoglomerulus namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Mediates the signals produced in response to bile acids." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:10:49Z @@ -28881,8 +28884,8 @@ namespace: zebrafish_anatomy def: "Single large glomerulus located in the ventral posterior region of the maturing glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "VPG" RELATED [] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:17:00Z @@ -28892,9 +28895,9 @@ name: central zone olfactory bulb namespace: zebrafish_anatomy def: "Central region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:25:20Z @@ -28904,9 +28907,9 @@ name: dorsal zone olfactory bulb namespace: zebrafish_anatomy def: "Dorsal region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:26:28Z @@ -28916,9 +28919,9 @@ name: lateral zone olfactory bulb namespace: zebrafish_anatomy def: "Lateral region of the glomerular layer of the olfactory bulb. The lateral region of the olfactory bulb consisted of morphologically diverse glomeruli and a diffuse aggregate of OSN axons, the lateral plexus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:27:13Z @@ -28928,9 +28931,9 @@ name: medial zone olfactory bulb namespace: zebrafish_anatomy def: "Medial region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:28:47Z @@ -28940,9 +28943,9 @@ name: ventral zone olfactory bulb namespace: zebrafish_anatomy def: "Ventral region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:29:39Z @@ -28952,9 +28955,9 @@ name: dorsolateral zone olfactory bulb namespace: zebrafish_anatomy def: "Lateral region of the dorsal zone of the olfactory bulb. Glomeruli in this zone are tightly clustered in both male and female fish." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050523-2, ZFIN:ZDB-PUB-101222-42, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005674 ! dorsal zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-06T04:46:27Z @@ -28964,9 +28967,9 @@ name: ventromedial zone olfactory bulb namespace: zebrafish_anatomy def: "Medial portion of the ventral region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005677 ! ventral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T09:59:45Z @@ -28977,9 +28980,9 @@ namespace: zebrafish_anatomy def: "Anterior portion of the ventral region of the glomerular layer of the olfactory bulb. In the ventroanterior zone there are typically seven small glomeruli located 11-20 micrometers beneath the superficial axon bundles The ganglion differed conspicuously in sizes, shapes, and distribution, and were not individually identifiable." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "vaGx" RELATED [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005677 ! ventral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T10:03:15Z @@ -28989,9 +28992,9 @@ name: ventroposterior zone olfactory bulb namespace: zebrafish_anatomy def: "Posterior portion of the ventral region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005677 ! ventral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T10:22:38Z @@ -29001,9 +29004,9 @@ name: mediodorsal zone of the olfactory bulb namespace: zebrafish_anatomy def: "Dorsal part of the medial region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T01:37:59Z @@ -29014,9 +29017,9 @@ namespace: zebrafish_anatomy def: "Anterior portion of the medial region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "medial anterior zone olfactory bulb" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T01:39:48Z @@ -29027,9 +29030,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located between ventromedial and medial olfactory bulb surfaces. The mpG is generally elongated and innervated by a single thick axon." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050523-2, ZFIN:ZDB-PUB-961014-62] synonym: "mpG" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T01:48:45Z @@ -29040,9 +29043,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsal zone of the olfactory bulb. It is located in a stereotypic position near the posterior edge of the dorsal glomerular zone and stains with anti-calretinin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsal glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005674 ! dorsal zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:25:26Z @@ -29053,9 +29056,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Dorsalmost of glomeruli located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:34:12Z @@ -29066,9 +29069,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG1 and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:38:24Z @@ -29079,9 +29082,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG2 and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:40:59Z @@ -29092,9 +29095,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG3 and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 4" RELATED [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:42:35Z @@ -29105,9 +29108,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG4, and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 5" RELATED [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:45:36Z @@ -29119,9 +29122,9 @@ def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Stains synonym: "ventral triplet glomerulus 1" EXACT [] synonym: "ventromedial glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:10:31Z @@ -29133,9 +29136,9 @@ def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Stains synonym: "ventral triplet glomerulus 2" EXACT [] synonym: "ventromedial glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:17:25Z @@ -29147,9 +29150,9 @@ def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Stains synonym: "ventral triplet glomerulus 3" EXACT [] synonym: "ventromedial glomerulus 3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:19:23Z @@ -29160,9 +29163,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Posterior to the triplet of ventromedial glomeruli strongly expressing calretinin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 4" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:24:43Z @@ -29173,9 +29176,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Posterior to vmG4." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 5" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:26:20Z @@ -29186,9 +29189,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Posterior to vmG4 adjacent to vmG5." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 6" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:27:26Z @@ -29199,9 +29202,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. vmG7 is located anteriorly to vmG1-3 and vmG4-6." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 7" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:31:32Z @@ -29212,9 +29215,9 @@ namespace: zebrafish_anatomy def: "Group of glomerulus located in the ventromedial zone of the olfactory bulb The vmGx group, is located 10-50 micrometers from the ventral surface of the olfactory bulb. And were located anywhere between the posteroventral and anteroventral regions of the olfactory bulb. It was not possible to unambiguously identify the vmGx because they displayed varying distributions and numbers in the olfactory bulbs of different animals." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerular group x" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:34:17Z @@ -29225,9 +29228,9 @@ namespace: zebrafish_anatomy def: "Group of glomerulus located in the ventromedial zone of the olfactory bulb. A cluster of comparatively small glomeruli located near the midline between the two olfactory bulbs The glomeruli in the vmGy were among the smallest glomeruli in the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerular group y" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:37:11Z @@ -29238,9 +29241,9 @@ namespace: zebrafish_anatomy def: "One of two large glomeruli located in the medial side of the ventroposterior zone olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventroposterior glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005681 ! ventroposterior zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:46:05Z @@ -29251,9 +29254,9 @@ namespace: zebrafish_anatomy def: "One of two large glomeruli located in the lateral side of the ventroposterior zone olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventroposterior glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005681 ! ventroposterior zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:47:52Z @@ -29265,9 +29268,9 @@ def: "Glomerulus located in the lateral zone of the olfactory bulb. LG1 is surro synonym: "glomerulus 1 of the lateral chain" EXACT [] synonym: "lateral glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T04:11:01Z @@ -29280,9 +29283,9 @@ synonym: "glomerulus 2 of the lateral chain" EXACT [] synonym: "lateral glomerulus 2" EXACT [] synonym: "lcG2 " EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T04:15:43Z @@ -29295,9 +29298,9 @@ synonym: "glomerulus 3 of the lateral chain" EXACT [] synonym: "lateral glomerulus 3" EXACT [] synonym: "lcG3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T04:18:03Z @@ -29310,9 +29313,9 @@ synonym: "glomerulus 4 of the lateral chain" EXACT [] synonym: "lateral glomerulus 4" EXACT [] synonym: "lcG4" RELATED [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:07:13Z @@ -29325,9 +29328,9 @@ synonym: "glomerulus 5 of the lateral chain" EXACT [] synonym: "lateral glomerulus 5" RELATED [] synonym: "lcG5 " EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:11:41Z @@ -29337,9 +29340,9 @@ name: lGx namespace: zebrafish_anatomy def: "Group of glomerulus located in the lateral region of the olfactory bulb. The glomeruli that compose lGx are smaller than the lG1-6 and varied in shape, sizes, and locations between olfactory bulbs of the same and different animals. The lGx were located either along the ventral edge of the lateral group or below the lateral olfactory bulb surface." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:16:21Z @@ -29351,9 +29354,9 @@ def: "Glomerulus located in the lateral zone of the olfactory bulb. LG6 is locat synonym: "lateral glomerulus 6" EXACT [] synonym: "lvpG" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:19:31Z @@ -29366,9 +29369,9 @@ synonym: "mdpG1" EXACT [] synonym: "mediodorsal glomerulus 1" EXACT [] synonym: "mediodorsal posterior glomerulus 1 " EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:49:49Z @@ -29381,9 +29384,9 @@ synonym: "mdpG2 " EXACT [] synonym: "mediodorsal glomerulus 2" EXACT [] synonym: "mediodorsal posterior glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:53:33Z @@ -29394,9 +29397,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. Glomerulus that lies ventral to mdG2 on the caudal edge of the mediodorsal glomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:54:46Z @@ -29407,9 +29410,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. Positioned between mdG2 and mdG5 on the dorsal edge of the medial dorsal glomerular cluster." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 4" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:56:36Z @@ -29420,9 +29423,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. . This glomerulus expresses a protein that cross reacts with antibodies raised against GNAO1. It is the dorsal to mdG6 on the rostral edge of the mediodorsal cluster." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 5" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:57:20Z @@ -29433,9 +29436,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. This glomerulus is the most ventral glomerulus in the mediodorsal cluster." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 6" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:58:01Z @@ -29447,9 +29450,9 @@ def: "Glomerulus located in the anteromedial zone of the olfactory bulb." [GOC: synonym: "maG" RELATED [] synonym: "medial anterior glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005683 ! anteromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T12:02:52Z @@ -29460,9 +29463,9 @@ namespace: zebrafish_anatomy def: "Group of small glomeruli located in the anteromedial zone of the olfactory bulb. The arrangements of glomeruli maGx varies between animals and they can't be identified as individual units." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "medial anterior glomeruli " RELATED [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005683 ! anteromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T12:04:40Z @@ -29473,9 +29476,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Dorsolateral protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG1" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T03:52:20Z @@ -29486,9 +29489,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Ventromedial protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG2" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:06:52Z @@ -29499,9 +29502,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Dorsomedial protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG3" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:08:18Z @@ -29512,9 +29515,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Ventrolateral protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG4" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:08:37Z @@ -29525,9 +29528,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Most lateral protoglomerulus in the central zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ1" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:13:36Z @@ -29538,9 +29541,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 1." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ2" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:20:35Z @@ -29551,9 +29554,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 2." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ3" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:21:01Z @@ -29564,9 +29567,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 3." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ4" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:35:43Z @@ -29577,9 +29580,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Most medial protoglomerulus in the central zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ5" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:36:02Z @@ -29590,9 +29593,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most posterio-lateral of the medial protoglomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG1 " RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:39:34Z @@ -29603,9 +29606,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most dorsally located medial protoglomerulus and medial to protoglomerulus 1." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG2" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:18Z @@ -29616,9 +29619,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Located between medial glomerulus 2 and medial glomerulus 4 along dorsal-ventral axis of the medial region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG3" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:38Z @@ -29629,9 +29632,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most ventral of the medial protoglomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG4" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:57Z @@ -29644,9 +29647,9 @@ subset: cell_slim synonym: "cranial motoneuron" EXACT [] xref: CL:0015000 is_a: ZFA:0009052 ! motor neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:04:57Z @@ -29660,8 +29663,8 @@ synonym: "branchi motor neuron" EXACT [] synonym: "special visceral motor neuron" EXACT [] xref: CL:0005023 is_a: ZFA:0005730 ! cranial motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:06:26Z @@ -29674,9 +29677,9 @@ subset: cell_slim synonym: "general visceral motor neuron" EXACT [] xref: CL:0005025 is_a: ZFA:0005730 ! cranial motor neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:08:10Z @@ -29688,10 +29691,10 @@ def: "Cranial motor neurons found in the midbrain and hindbrain that innervates subset: cell_slim xref: CL:0005024 is_a: ZFA:0005730 ! cranial motor neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:09:35Z @@ -29701,10 +29704,10 @@ name: lacunocanalicular system namespace: zebrafish_anatomy def: "A system of osteocytes connected through canals within the vertebra. Osteocytes extend processes through canals within ossified bone. The lacunocanalicular system is poorly developed in zebrafish with most osteocytes having one or two cytoplasmic processes." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-22629-14] is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001189 ! vertebra relationship: part_of ZFA:0005621 ! bone tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T11:48:50Z @@ -29714,9 +29717,9 @@ name: lacunocanalicular canal namespace: zebrafish_anatomy def: "Anatomical space, part of the lacunocanalicular system that connects lacuna within bone tissue allowing osteocyte projections to connect." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-11518-14] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T12:10:17Z @@ -29726,9 +29729,9 @@ name: lacuna namespace: zebrafish_anatomy def: "Anatomical space a small cavity, in the matrix of bone tissue. Part of the lacunocanalicular system." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T12:19:22Z @@ -29741,8 +29744,8 @@ synonym: "endodermal rod" RELATED [ZFIN:ZDB-PUB-030115-26] synonym: "intestinal anlage" RELATED [ZFIN:ZDB-PUB-050120-6.] is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Ceri creation_date: 2013-07-23T03:03:23Z @@ -29753,8 +29756,8 @@ namespace: zebrafish_anatomy def: "Portion of the intestinal rod that loops to left between 26-30hpf and gives rise to the intestinal bulb and liver and anterior pancreatic primordium. The endoderm at this stage is a compact mass of cells with little to no polarization." [ZFIN:ZDB-PUB-031103-19] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-07-23T03:06:11Z @@ -29766,9 +29769,9 @@ def: "A secretory cell found in pancreatic acini that secretes digestive enzymes subset: cell_slim xref: CL:0002064 is_a: ZFA:0009277 ! acinar cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005741 ! pancreatic acinar gland -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:13:45Z @@ -29781,9 +29784,9 @@ subset: cell_slim synonym: "CAC" EXACT [ZFIN:ZDB-PUB-050623-3] xref: CL:0002080 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005741 ! pancreatic acinar gland -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:16:32Z @@ -29795,9 +29798,9 @@ def: "Portion of exocrine pancreas that is comprised of polarized cells containi synonym: "exocrine glands pancreas" EXACT [] synonym: "pancreatic acini" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:42:33Z @@ -29813,9 +29816,9 @@ synonym: "PP cell of pancreatic islet" EXACT [] synonym: "PP-cell of pancreatic islet" EXACT [] xref: CL:0002275 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001260 ! endocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-29T10:59:29Z @@ -29831,9 +29834,9 @@ synonym: "pancreatic delta cell" EXACT [] synonym: "somatostatin-secreting pancreatic cell" EXACT [] xref: CL:0000173 is_a: ZFA:0009228 ! D cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001260 ! endocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-29T11:03:15Z @@ -29846,9 +29849,9 @@ subset: cell_slim synonym: "notochord sheath cell" RELATED [] xref: CL:0007007 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2013-07-30T04:09:49Z @@ -29860,8 +29863,8 @@ def: "A cell whose primary function is to provide structural support, to provide subset: cell_slim xref: CL:0000293 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-30T04:14:44Z @@ -29873,9 +29876,9 @@ def: "Structural cell of notochord that contain one large fluid-filled intracell subset: cell_slim synonym: "chordocytes" EXACT [] is_a: ZFA:0005745 ! structural cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2013-07-30T04:15:56Z @@ -29886,9 +29889,9 @@ namespace: zebrafish_anatomy def: "Lymph vessels that are located on either side of the PCV in the posterior region of the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "SIL" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005840 ! intestinal lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2013-07-31T10:44:16Z @@ -29898,10 +29901,10 @@ name: intrapancreatic duct namespace: zebrafish_anatomy def: "Digestive duct within the pancreas. The pancreatic duct carries inactive digestive enzymes to the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3, ZFIN:ZDB-PUB-101201-32] is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000140 ! pancreas relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-08-01T02:17:49Z @@ -29911,8 +29914,8 @@ name: intercalated duct pancreas namespace: zebrafish_anatomy def: "The portion of the intrapancreatic duct leading from the pancreatic acinar gland to the intralobular duct." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:44:27Z @@ -29922,9 +29925,9 @@ name: pancreatic intralobular duct namespace: zebrafish_anatomy def: "Intrapancreatic duct within a pancreatic lobe that connects all the intercalated duct with an interlobular duct. The intralobular duct is lined with cuboidal cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:50:38Z @@ -29934,8 +29937,8 @@ name: pancreatic interlobular duct namespace: zebrafish_anatomy def: "Intrapancreatic duct that connects the intralobular duct to the main pancreatic duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T02:53:52Z @@ -29945,8 +29948,8 @@ name: main intrapancreatic duct namespace: zebrafish_anatomy def: "Intrapancreatic duct that connects to the interlobular ducts and drains into the extrapancreatic duct. The main duct may not be present in all larva and may develop in a segmented fashion." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3, ZFIN:ZDB-PUB-070310-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:55:07Z @@ -29958,9 +29961,9 @@ def: "Cluster of acinar glands surrounding an intralobular duct." [GOC:cvs, ORCi comment: Lobules are composed of multiple acini so are only apparent starting ~72hpf. Before 72hpf consider annotating to acinar gland. synonym: "exocrine lobule" EXACT [ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001249 ! exocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T03:16:34Z @@ -29971,8 +29974,8 @@ namespace: zebrafish_anatomy def: "The primary islet is the first islet to develop." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "principal islet" EXACT [] is_a: ZFA:0005755 ! islet -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T04:05:06Z @@ -29982,9 +29985,9 @@ name: islet namespace: zebrafish_anatomy def: "Portion of tissue composed of a group of cells in the pancreas producing insulin, glucagon and somatostatin. Part of the endocrine pancreas." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001260 ! endocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T04:10:28Z @@ -29995,8 +29998,8 @@ namespace: zebrafish_anatomy def: "Islets that develop after the primary islet. The secondary islets usually form around 7 dpf but can be induced to form as early as 5 dpf." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130710-45, ZFIN:ZDB-PUB-140817-2] comment: Start stage known to be after 3dpf. is_a: ZFA:0005755 ! islet -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2013-08-01T04:10:55Z @@ -30008,9 +30011,9 @@ def: "Portion of tissue composed of the signal-generating cells within the zona synonym: "MDO" EXACT [] synonym: "mid-diencephalic organizer" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001344 ! zona limitans intrathalamica -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-08-02T03:20:09Z @@ -30021,9 +30024,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue interspersed within the pancreatic acini." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2013-09-23T10:03:51Z @@ -30035,9 +30038,9 @@ def: "Adipose tissue on the surface of the organs within the pleuroperitoneal ca comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. synonym: "visceral fat deposit" RELATED [] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2013-09-23T10:23:07Z @@ -30048,9 +30051,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue in the cranium. Cranial adipocytes are located within the ventral wall of the cranium, situated between the brain and the esophagus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T10:26:44Z @@ -30061,9 +30064,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue surrounding the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917] comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005760 ! cranial fat -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001410 ! orbital region -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T10:59:00Z @@ -30073,8 +30076,8 @@ name: subcutaneous fat namespace: zebrafish_anatomy def: "Adipose tissue between muscle and integument." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111012-7] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T11:20:54Z @@ -30084,9 +30087,9 @@ name: esophageal fat namespace: zebrafish_anatomy def: "Adipose tissue surrounding the esophagus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:32:46Z @@ -30097,9 +30100,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue deposited along the mandible." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] synonym: "jaw fat deposit" EXACT [] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:33:07Z @@ -30110,9 +30113,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue surrounding the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090417-9] synonym: "pericardial fat deposit" EXACT [] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000054 ! pericardium -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:41:21Z @@ -30123,9 +30126,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue that forms at the base of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090417-9] synonym: "pectoral fin plate deposit" EXACT [] is_a: ZFA:0005762 ! subcutaneous fat -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:42:40Z @@ -30136,9 +30139,9 @@ namespace: zebrafish_anatomy def: "Subcutaneous adipose tissue deposit at the base of the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] synonym: "tail fin fat" EXACT [] is_a: ZFA:0005762 ! subcutaneous fat -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T12:46:21Z @@ -30147,9 +30150,10 @@ id: ZFA:0005768 name: trigeminal sensory neuron namespace: zebrafish_anatomy def: "Sensory neuron that extends a single axon shaft along the lateral white matter of the hindbrain and spinal cord. Numerous medially projecting branches are later formed and innervate a series of target nuclei along the anteroposterior axis of the hindbrain and spinal cord. The highly branched axons innervate the integument of the head. There are several subtypes with different afferent branching morphologies." [ZFIN:ZDB-PUB-120106-15] +subset: cell_slim is_a: ZFA:0009053 ! sensory neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2013-09-30T03:31:51Z @@ -30162,9 +30166,9 @@ subset: cell_slim xref: CL:0000018 is_a: ZFA:0009016 ! germ line cell relationship: develops_from ZFA:0009005 ! spermatocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2013-10-04T03:51:27Z @@ -30173,9 +30177,10 @@ id: ZFA:0005770 name: crypt neuron olfactory support cell namespace: zebrafish_anatomy def: "Specialized olfactory support cell that surrounds crypt olfactory sensory neurons. There are one or two support cells for each crypt neuron. The cytoplasm of crypt neuron olfactory support cells is less electron dense then other support cells. They also bear numerous microvilli at their apical rim. When two supporting cells are present, they interdigitate with each other Mitochondria in crypt supporting cells are larger than those in the common supporting cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060724-7] +subset: cell_slim is_a: ZFA:0000688 ! olfactory support cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-11-05T11:05:25Z @@ -30186,8 +30191,8 @@ namespace: zebrafish_anatomy def: "Portion of tissue that develops from the cranial neural crest and which cells populate a series of pharyngeal arches from which develops the support skeleton of the jaw and gills." [ZFIN:ZDB-PUB-110609-14, ZFIN:ZDB-PUB-120517-11] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007087 ! migratory cranial neural crest -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Ceri creation_date: 2013-11-25T12:11:28Z @@ -30199,8 +30204,8 @@ def: "Diploid cell produced by the fusion of sperm cell nucleus and egg cell." [ synonym: "zygote " EXACT [] xref: CL:00000365 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000001 ! Zygote:1-cell -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000001 ! zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell created_by: Ceri creation_date: 2013-11-25T01:46:49Z @@ -30209,10 +30214,11 @@ id: ZFA:0005773 name: embryonic blood vessel endothelial progenitor cell namespace: zebrafish_anatomy def: "An endothelial progenitor cell that participates in angiogenesis during development." [GOC:tjm] +subset: cell_slim xref: CL:0002546 is_a: ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2013-12-02T02:57:49Z @@ -30222,9 +30228,9 @@ name: atrial epicardium namespace: zebrafish_anatomy def: "The external layer of the atrium bounding the atrial myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100112-31] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005057 ! epicardium -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2013-11-26T04:32:55Z @@ -30233,11 +30239,12 @@ id: ZFA:0005775 name: enteric neuron namespace: zebrafish_anatomy def: "Neuron that is part of the enteric nervous system." [CL:MAH] +subset: cell_slim xref: CL:0007011 is_a: ZFA:0009059 ! autonomic neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001155 ! enteric nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T12:36:50Z @@ -30246,11 +30253,12 @@ id: ZFA:0005776 name: parasympathetic neuron namespace: zebrafish_anatomy def: "Parasympathetic neurons are part of the parasympathetic nervous system and the cell bodies lie in the brain and sacral region of the spinal cord. The neurons are mainly cholinergic." [ISBN:0080923437] +subset: cell_slim xref: CL:0011102 is_a: ZFA:0009059 ! autonomic neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001575 ! parasympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T12:39:37Z @@ -30259,11 +30267,12 @@ id: ZFA:0005777 name: sympathetic neuron namespace: zebrafish_anatomy def: "Sympathetic neurons are part of the sympathetic nervous system and are primarily adrenergic producing the neurotransmitter noradrenalin along with other neuropeptides." [ISBN:0080923437] +subset: cell_slim xref: CL:0011103 is_a: ZFA:0009059 ! autonomic neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T12:42:24Z @@ -30272,11 +30281,12 @@ id: ZFA:0005778 name: hypocretin-secreting neuron namespace: zebrafish_anatomy def: "A neuron that releases hypocretin as a neurotransmitter." [PMID:23848055] +subset: cell_slim synonym: "orexin secreting neuron " RELATED [] xref: CL:0011109 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T01:14:29Z @@ -30286,9 +30296,9 @@ name: thymic epithelium namespace: zebrafish_anatomy def: "Epithelium within the thymus where lymphocytes mature. Cells of the thymic epithelium have cytoplasm that appear devoid of most membrane bound organelles but contain bundles of cytoplasmic filaments, and frequent desmosomes occur between these epithelial cells. There are also secretory epithelial cells that contain a heterogeneous population of electron-dense, cytoplasmic granules and a well developed Golgi complex. Epithelial cysts are present after 3 weeks." [ZFIN:ZDB-PUB-990414-60] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001078 ! thymus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-03-11T03:25:06Z @@ -30298,9 +30308,9 @@ name: immature thymic epithelium namespace: zebrafish_anatomy def: "Epithelium of the thymus primordium composed of cells of immature morphology. The immature thymic epithelium is continuous with the pharyngeal epithelium. The immature thymic epithelium is composed of electron-lucent epithelial cells of irregular or polygonal shape and contain numerous ribosomes, large electron-lucent mitochondria, and rough endoplasmic reticulum. Nascent desmosomes join these primitive epithelial cells together." [ZFIN:ZDB-PUB-990414-60] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001077 ! thymus primordium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2014-03-11T03:28:25Z @@ -30310,9 +30320,9 @@ name: cloaca namespace: zebrafish_anatomy def: "Part of the gut where the pronephric tubules come together with the caudal end of the intestine attaching at 4dpf. The oviduct or sperm duct connect later." [ZFIN:ZDB-PUB-060508-11] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2014-03-12T09:34:37Z @@ -30323,9 +30333,9 @@ namespace: zebrafish_anatomy def: "The juncture where the intestine empties into the cloaca." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "gut opening" EXACT [] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000330 ! cloacal chamber -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-12T09:39:01Z @@ -30335,10 +30345,10 @@ name: cloacal epithelium namespace: zebrafish_anatomy def: "Epithelium lining the cloaca. The epithelium is a simple cuboidal epithelium at Prim-5." [ZFIN:ZDB-PUB-000505-17] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005123 ! gut epithelium relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2014-03-12T10:18:40Z @@ -30347,10 +30357,11 @@ id: ZFA:0005784 name: striated muscle cell namespace: zebrafish_anatomy def: "Muscle cell which has as its direct parts myofilaments organized into sarcomeres." [GOC:tfm, ISBN:0721662544] +subset: cell_slim xref: CL:0000737 is_a: ZFA:0009114 ! muscle cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-18T03:14:29Z @@ -30361,13 +30372,13 @@ namespace: zebrafish_anatomy def: "Striated muscle of the esophagus. Permits voluntary swallowing." [ZFIN:ZDB-PUB-130709-61] synonym: "oesophageal striated muscle (OSM)" EXACT [ZFIN:ZDB-PUB-130709-61] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0000072 ! somite 1 relationship: has_developmental_contribution_from ZFA:0000728 ! somite 2 relationship: has_developmental_contribution_from ZFA:0000732 ! somite 3 relationship: has_developmental_contribution_from ZFA:0005923 ! anterior migratory muscle precursor stream relationship: part_of ZFA:0000204 ! esophagus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-03-18T03:37:56Z @@ -30376,10 +30387,11 @@ id: ZFA:0005786 name: cleft cell namespace: zebrafish_anatomy def: "Wedge-shaped epidermal cell positioned along the apex of the developing fin fold. Each cleft cell retains a wedge-shaped form during fold formation and develops a basal cleft-shaped invagination. Invaginations are aligned in neighboring cleft cells so that these cells cap the distal boundary of the subepidermal space where collagenous extracellular fibres called actinotrichia run anteroposteriorly along the length of the fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-195] +subset: cell_slim is_a: ZFA:0009183 ! epidermal cell -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2014-03-25T09:31:29Z @@ -30389,9 +30401,9 @@ name: hypophyseal artery namespace: zebrafish_anatomy def: "Artery that runs along the midline from anterior to posterior regions of the hypothalamus and splits into two capillary branches (hyc). The formation of the artery is initiated at the hypophysis itself and extends anteriorly until it connects with the palatocerebral arteries at day 2.5." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111027-47, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T10:42:12Z @@ -30401,9 +30413,9 @@ name: hypophyseal vein namespace: zebrafish_anatomy def: "Vein thats tarts posterior of the hypophysis and drains the hypophyseal capillaries. It empties into the primary head sinus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T10:47:03Z @@ -30414,8 +30426,8 @@ namespace: zebrafish_anatomy def: "Axon tract originating from the two hemispheres of the neurosecretory preoptic areas converging into the midline and terminating at the ventral part of the hypothalamus at the presumed location of the pituitary. Analogous to the supraopticohypophyseal tract in mammals." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111027-47] synonym: "preopticohypophyseal axon tract" EXACT [] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-04-03T11:19:03Z @@ -30425,9 +30437,9 @@ name: hypophyseal capillary namespace: zebrafish_anatomy def: "Pair of capillaries that bilaterally encompass the hypophysis starting at the anterior aspect of the hypophysis (pituitary). Directly posterior to the pituitary, the two capillaries fuse with the hypophyseal vein." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T11:27:53Z @@ -30437,9 +30449,9 @@ name: breeding tubercle namespace: zebrafish_anatomy def: "Surface structure that is a keratinized epidermal appendages that is a contact organ and secondary sex organ." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-05-15T03:26:12Z @@ -30450,8 +30462,8 @@ namespace: zebrafish_anatomy def: "Surface structure that is a protrusion from the rostral end of the jaw, supported by the mandibular projection." [ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] synonym: "lateral projections lower jaw" EXACT [] is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:10:53Z @@ -30461,9 +30473,9 @@ name: superficial layer of breeding tubercle namespace: zebrafish_anatomy def: "Layer of smooth cells composing the outer layer of the breeding tubercle. Cells in this layer have a high keratin content, lamellar bodies, and condensed chromosomes. This layer is repeatedly shed and regenerated." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:33:07Z @@ -30473,9 +30485,9 @@ name: second tier layer of breeding tubercle namespace: zebrafish_anatomy def: "Cell layer that lies underneath the superficial layer of the breeding tubercle. Characterized by tight junctions within the layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:46:01Z @@ -30486,9 +30498,9 @@ namespace: zebrafish_anatomy def: "Intermediate layer of the breeding tubercles characterized by cells with loose spinous organization connected to each other via desmosomes, but with wide extracellular spaces in between." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] synonym: "spinous keratinocyte layer" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:46:51Z @@ -30498,9 +30510,9 @@ name: basal layer breeding tubercle namespace: zebrafish_anatomy def: "Layer of breeding tubercle proximal to basal lamina of the integument." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:48:25Z @@ -30510,10 +30522,10 @@ name: pectoral fin breeding tubercle namespace: zebrafish_anatomy def: "Breeding tubercles along the surface of the pectoral fin lepidotrichium of males." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0005791 ! breeding tubercle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000242 ! male organism relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-04T02:50:54Z @@ -30523,8 +30535,8 @@ name: jaw row breeding tubercle namespace: zebrafish_anatomy def: "Surface structures composed of breeding tubercles arranged in a double row in the medial region on each side of the lower jaw." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0005791 ! breeding tubercle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:56:48Z @@ -30534,8 +30546,8 @@ name: jaw flap breeding tubercle namespace: zebrafish_anatomy def: "Breeding tubercles that cover the surface of the jaw flap." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0005791 ! breeding tubercle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T03:32:28Z @@ -30545,9 +30557,9 @@ name: extracellular lipid lamellae namespace: zebrafish_anatomy def: "Portion of organism substance that is located between the cap and second tier layers of the breeding tubercles. The lipid lamellae is composed of lipids." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T04:00:53Z @@ -30559,9 +30571,9 @@ def: "The interrenal vessel (IRV) is the blood vessels supplying the interrenal synonym: "IRV" EXACT [] is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0005802 ! interrenal angiogenic sprout -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001345 ! interrenal gland -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-06-06T01:45:08Z @@ -30571,9 +30583,9 @@ name: interrenal angiogenic sprout namespace: zebrafish_anatomy def: "Sprout from the dorsal aorta that develops into the interrenal vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120905-5] is_a: ZFA:0005604 ! angiogenic sprout -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001346 ! interrenal primordium -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2014-06-10T10:26:33Z @@ -30583,9 +30595,9 @@ name: cupula namespace: zebrafish_anatomy def: "Gelatinous substance surrounding the kinocila of the neuromast." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-768] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T09:55:56Z @@ -30597,10 +30609,10 @@ def: "Efferent neuron where the cell body is located in the hindbrain reticular subset: cell_slim synonym: "RELL neuron" EXACT [] is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T10:08:34Z @@ -30612,9 +30624,9 @@ def: "Efferent neuron located in the hindbrain. The axon of ROLE cells travels subset: cell_slim synonym: "ROLE neuron" EXACT [] is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T10:42:22Z @@ -30627,10 +30639,10 @@ comment: There may be 2 neuron types grouped under this name since there are som subset: cell_slim synonym: "DELL neuron" EXACT [] is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T11:50:49Z @@ -30641,9 +30653,9 @@ namespace: zebrafish_anatomy def: "Anatomical space within the intestine where digestion normally occurs. The intestinal lumen begins as an interconnected web of small space at 43 hpf that over time remodels to form a single continuous tube at 68hpf. Lumen maturation proceeds from anterior to posterior along the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140415-28] synonym: "gut lumen" RELATED [] is_a: ZFA:0005930 ! lumen -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-14T01:57:57Z @@ -30656,9 +30668,9 @@ comment: Appears after cardiac looping ~30hpf. Derived from mesoderm. synonym: "proepicardial organ" EXACT [ZFIN:ZDB-PUB-080218-16] synonym: "proepicardium" EXACT [ZFIN:ZDB-PUB-140603-8] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-28T03:01:42Z @@ -30669,9 +30681,9 @@ namespace: zebrafish_anatomy def: "Network of heavily branched muscle in the atrium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-001026-2] synonym: "pectinate muscles" EXACT PLURAL [] is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-07-28T04:28:45Z @@ -30681,10 +30693,10 @@ name: trabecular layer of the atrium namespace: zebrafish_anatomy def: "Trabecular layer of the atrial myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001374 ! atrial myocardium relationship: part_of ZFA:0005059 ! trabecular layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-28T04:35:49Z @@ -30694,9 +30706,9 @@ name: heart vasculature namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:04:10Z @@ -30707,9 +30719,9 @@ namespace: zebrafish_anatomy def: "Artery that carries blood from the efferent branchial artery to the cardiac ventricle. The artery runs along the ventral surface of the bulbus arteriosus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] synonym: "coronary vessel" EXACT [ZFIN:ZDB-PUB-010912-30] is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005811 ! heart vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:05:29Z @@ -30719,9 +30731,9 @@ name: coronary capillary namespace: zebrafish_anatomy def: "Capillaries that innervate the subtrabecular layer of the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005811 ! heart vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:09:35Z @@ -30731,9 +30743,9 @@ name: coronary vein namespace: zebrafish_anatomy def: "Vein that carries blood from the coronary capillaries to the atrial chamber entering the atrium close to the atrioventricular region." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005811 ! heart vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:11:35Z @@ -30751,8 +30763,8 @@ synonym: "T-interneuron" EXACT [] synonym: "t-interneuron" EXACT [] xref: TAO:0005182 is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T02:33:52Z @@ -30763,9 +30775,9 @@ namespace: zebrafish_anatomy def: "Anterior longitudinal muscles of the dorsal fin. The dorsal fin protractor originates from the base of the first soft ray of the dorsal fin, extends along the midline just underneath the skin, and inserts at the posterior portion of the skull. Contracting the dorsal protractor will raise the fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] synonym: "protractor dorsalis" EXACT [] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-27T12:59:02Z @@ -30776,9 +30788,9 @@ namespace: zebrafish_anatomy def: "Anterior longitudinal muscles of the dorsal fin. That originates from the caudal end of the dorsal fin base, stretches along the midline between the right and left epaxial muscles, and inserts at the dorsal base of the tail fin. Contracting the dorsal retractor will lower the fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] synonym: "retractor dorsalis" EXACT [] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-27T01:05:51Z @@ -30788,8 +30800,8 @@ name: superficial caudal fin musculature namespace: zebrafish_anatomy def: "The layer of caudal fin musculature immediately under the integument that originate from the vertebral column and insert at the base of caudal fin rays." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] is_a: ZFA:0000628 ! caudal fin musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-29T04:13:54Z @@ -30799,8 +30811,8 @@ name: deep caudal fin musculature namespace: zebrafish_anatomy def: "The layer of caudal fin musculature immediately under the superficial caudal fin musculature that originate from the vertebral column and insert at the base of caudal fin rays. The three most caudal vertebrae and the hypurals serve as attachment sites for these muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] is_a: ZFA:0000628 ! caudal fin musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-29T04:16:13Z @@ -30812,10 +30824,10 @@ def: "Paired, deep caudal fin muscles that arise broadly from the hypurals and e synonym: "ACV" RELATED [] synonym: "adductor caudalis ventralis" EXACT [] is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000902 ! hypural muscle relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T09:51:20Z @@ -30827,9 +30839,9 @@ def: "Paired superficial caudal fin muscle that has a narrow attachment site alo synonym: "ICV" RELATED [] synonym: "interfilamenti caudalis ventralis" EXACT [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-10-30T10:11:24Z @@ -30841,9 +30853,9 @@ def: "Paired superficial caudal fin muscle that has a narrow attachment site alo synonym: "ICD" RELATED [] synonym: "interfilamenti caudalis dorsalis " EXACT [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-10-30T10:14:35Z @@ -30855,9 +30867,9 @@ def: "Paired superficial caudal fin muscle that originates from a broad base at synonym: "lateralis superficialis dorsalis" EXACT [] synonym: "LSD" RELATED [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T12:34:51Z @@ -30869,9 +30881,9 @@ def: "Paired superficial caudal fin muscle that is located ventrally and extends synonym: "lateralis profundus ventralis " EXACT [] synonym: "LPV" RELATED [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T12:44:54Z @@ -30883,9 +30895,9 @@ def: "Paired superfical caudal fin muscle that is located dorsally and extends f synonym: "lateralis profundus dorsalis" EXACT [] synonym: "LPD" RELATED [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T01:24:56Z @@ -30895,9 +30907,9 @@ name: tri-tipped trabecula namespace: zebrafish_anatomy def: "Cardiac muscle located in the trabecular layer of the ventricle that is attached to the base of the AV and BV valves. It is similar to the papillary muscle in mammals and birds but, does not attach to the ends of the valve leaflets." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005060 ! trabecular layer of ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-02-19T03:45:32Z @@ -30907,9 +30919,9 @@ name: transverse band namespace: zebrafish_anatomy def: "Cardiac muscle located in the trabecular layer of the ventricle that spans the central lumen near the ventricular apex. The transverse muscle band superficially resembles the septomarginal trabecula found in reptilian and mammalian hearts in that it spans the ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005060 ! trabecular layer of ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-02-19T03:48:37Z @@ -30921,8 +30933,8 @@ def: "An olfactory receptor cells with apical microvilli. The pear shaped soma subset: cell_slim synonym: "kappe neuron" EXACT [] is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-02-20T10:55:06Z @@ -30933,9 +30945,9 @@ namespace: zebrafish_anatomy def: "Vessel that drains aqueous humor from the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140728-8] comment: ZDB-PUB-140728-8 says the canal has lymphatic-like. is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-02-23T10:20:30Z @@ -30950,8 +30962,8 @@ synonym: "haemopoietic cell" RELATED [] synonym: "hemopoietic cell" EXACT [] xref: CL:0000988 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-02-27T09:55:34Z @@ -30962,9 +30974,9 @@ namespace: zebrafish_anatomy def: "Interconnected lymph vasculature in the anterior portion of the head." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "facial lymphatics" RELATED [] is_a: ZFA:0005105 ! lymph vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2015-04-21T03:16:49Z @@ -30976,11 +30988,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 3. The vessel s synonym: "LAA1" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001606 ! pharyngeal arch 3 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-21T04:16:23Z @@ -30992,11 +31004,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 4. The vessel s synonym: "LAA2" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001607 ! pharyngeal arch 4 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-22T10:05:13Z @@ -31008,11 +31020,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 5. The vessel s synonym: "LAA3" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001608 ! pharyngeal arch 5 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-22T10:06:52Z @@ -31024,11 +31036,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 6. The vessel s synonym: "LAA4 " EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001610 ! pharyngeal arch 7 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-04-22T10:18:37Z @@ -31040,9 +31052,9 @@ def: "Lymphangiogenic sprout that originates from the common cardinal vein and comment: Although a facial lymphatic vessel has previously been described using lymphangiography in 5-week-old zebrafish (Yaniv et al., 2006), we are not sure whether\nthis previously described vessel is connected to, or derived from, the FL network that we have identified (ZDB-PUB-120529-43). synonym: "FLS" EXACT [] is_a: ZFA:0005603 ! lymphangiogenic sprout -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2015-04-22T12:15:12Z @@ -31055,9 +31067,9 @@ synonym: "lateral facial lymphatic" EXACT [] synonym: "LFL" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005836 ! facial lymphatic sprout -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-04-22T12:41:36Z @@ -31069,9 +31081,9 @@ def: "Facial lymphatic vessel that sprouts from the lateral facial lymph vessel. synonym: "otolithic lymphatic vessel" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-04-22T02:06:44Z @@ -31084,9 +31096,9 @@ synonym: "medial facial lymphatic" EXACT [] synonym: "MFL " EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-23T01:49:47Z @@ -31098,8 +31110,8 @@ def: "Lymph vasculature surrounding the intestines." [GOC:cvs, ORCID:0000-0002-2 synonym: "" RELATED [] synonym: "intestinal lymphatics" EXACT [] is_a: ZFA:0005105 ! lymph vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-30T11:15:28Z @@ -31110,9 +31122,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel that follows the supraintestinal artery." [GOC:CVS, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "UR-IL" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005843 ! right intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:25:27Z @@ -31123,9 +31135,9 @@ namespace: zebrafish_anatomy def: "Pair of lymph vessel that follows the right subintestinal vein. At 6 dpf, the LR-IL appears to bifurcate and form two separate vessels that both run in close proximity to one another along the right sub intestinal vein. These vessels are difficult to distinguish from each other at 6dp." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "LR-IL" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005843 ! right intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:28:11Z @@ -31135,8 +31147,8 @@ name: right intestinal lymphatics namespace: zebrafish_anatomy def: "Lymph vessels that are on the right side of the intestine." [GOC:cvs, ORCID:0000-0002-2244-7917] is_a: ZFA:0005840 ! intestinal lymphatic network -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-30T11:31:28Z @@ -31146,9 +31158,9 @@ name: lymph vessel namespace: zebrafish_anatomy def: "Any of the tubular multi-tissue structures through which lymph moves in the body. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal." [GOC:cvs, ORCID:0000-0002-2244-7917] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-04-30T11:44:00Z @@ -31160,9 +31172,9 @@ def: "Lymph vessel that extends along the left subintestinal vein." [GOC:cvs, OR synonym: "LL-IL" EXACT [] synonym: "lower left intestinal lymphatic" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005846 ! left intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:49:08Z @@ -31172,8 +31184,8 @@ name: left intestinal lymphatics namespace: zebrafish_anatomy def: "Lymph vessels that are on the left side of the intestine. These do not run as far posteriorly as the right intestinal lymphatics." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005840 ! intestinal lymphatic network -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-30T11:52:58Z @@ -31184,9 +31196,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel on the left of the intestine that runs parallel to the upper right intestinal lymph vessel. There does not appear to be an associated blood vessel." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "UL-IL" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005846 ! left intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T12:28:46Z @@ -31196,9 +31208,9 @@ name: intestinal interlymphatic vessel namespace: zebrafish_anatomy def: "Lymph vessel that connects lymph vessels within the intestinal lymphatic network." [GOC:cvs, ORCID:0000-0002-2244-7917] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005840 ! intestinal lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T01:40:05Z @@ -31209,8 +31221,8 @@ namespace: zebrafish_anatomy def: "Is a multi-tissue structure composed of dentine, enameloid and tooth pulp that develops from the dental organ. These structures successively replace the primary ceratobranchial teeth." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-001208-4] is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: develops_from ZFA:0005138 ! dental organ -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth creation_date: 2015-06-19T12:48:15Z [Term] @@ -31223,8 +31235,8 @@ synonym: "nTPC" RELATED [] synonym: "nucleus of posterior commissure" EXACT [] synonym: "nucleus of the tract of the posterior commissure " RELATED [] is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-06-19T03:27:22Z @@ -31234,8 +31246,8 @@ name: ceratobranchial 5 primary tooth namespace: zebrafish_anatomy def: "Is a multi-tissue structure composed of dentine, enameloid and tooth pulp that develops from the dental organ. These are the first teeth to develop." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-020820-10] is_a: ZFA:0000694 ! ceratobranchial 5 tooth -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2015-07-01T04:53:58Z @@ -31245,9 +31257,9 @@ name: replacement tooth 4V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 3V and anterior to tooth 5V in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 4V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-07-01T04:55:16Z @@ -31257,9 +31269,9 @@ name: replacement tooth 5V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 5V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-07-02T09:04:21Z @@ -31269,9 +31281,9 @@ name: replacement tooth 3V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 3V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-07-02T09:05:23Z @@ -31281,9 +31293,9 @@ name: replacement tooth 2V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1V and anterior to tooth 3V in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 2V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-07-02T09:18:29Z @@ -31293,9 +31305,9 @@ name: replacement tooth 1V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 1V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-07-02T09:19:35Z @@ -31305,8 +31317,8 @@ name: bile namespace: zebrafish_anatomy def: "Zebrafish bile contains the bile alcohol cyprinol sulfate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120822-8] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-07-31T11:15:59Z @@ -31317,8 +31329,8 @@ namespace: zebrafish_anatomy def: "Capillaries that branch from the hyaloid artery and drain into the hyaloid vein. The hyaloid capillaries are located behind the lens and may be transient." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-150419-5] is_a: ZFA:0005046 ! hyaloid vessel is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-08-17T04:43:51Z @@ -31328,8 +31340,8 @@ name: ceratohyal-interhyal joint namespace: zebrafish_anatomy def: "Joint that articulates the interhyal skeletal element and ceratohyal skeletal element. The ceratohyal-interhyal joint is paired." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-970210-30] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-09-09T01:15:07Z @@ -31339,8 +31351,8 @@ name: interhyal-hyosymplectic joint namespace: zebrafish_anatomy def: "Joint that articulates the interhyal element and the hyosymplectic element. The interhyal-hyosymplectic joint is paired." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-970210-30] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-09-09T01:28:54Z @@ -31350,8 +31362,8 @@ name: opercle-hyosymplectic joint namespace: zebrafish_anatomy def: "Joint that articulates the opercle and they hyosymplectic. The opercle-hyosymplectic joint is paired." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-970210-30] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-09-09T01:33:46Z @@ -31361,8 +31373,8 @@ name: ovarian lymph vessel namespace: zebrafish_anatomy def: "Lymph vessels within the ovary. These vessels are located in the interstitium between ovarian follicles and appear to envelop arterioles." [GOC:CVS, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-130218-10] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2015-10-28T12:00:39Z @@ -31373,9 +31385,9 @@ namespace: zebrafish_anatomy def: "Pectoral fin muscle. Links pectoral fin and branchial movement and stabilizes the pectoral girdle. Thought to be the teleost homologue of the cucullaris muscle group." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-110803-26] synonym: "protractor pectoralis" EXACT [ZFIN:ZDB-PUB-110803-26] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-10-28T04:41:12Z @@ -31385,9 +31397,9 @@ name: retinotectal tract namespace: zebrafish_anatomy def: "Portion of optic tract that innervates the optic tectum." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1095, ZFIN:ZDB-PUB-961014-148] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000252 ! optic tract -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2016-01-11T03:48:45Z @@ -31396,9 +31408,10 @@ id: ZFA:0005865 name: reticulospinal neuron namespace: zebrafish_anatomy def: "Neuron with the large soma in the brain with an axon projecting caudally to the spinal cord." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-594] +subset: cell_slim is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-01-12T10:33:08Z @@ -31407,10 +31420,11 @@ id: ZFA:0005866 name: vestibulospinal neuron namespace: zebrafish_anatomy def: "CNS interneuron with a soma located in a cluster in the lateral wall of the medulla, with dendrites confined to the neuropil, that has connections to the vestibular and lateral line neurons." [ZFIN:ZDB-PUB-961014-572] +subset: cell_slim synonym: "V" RELATED [] is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-01-12T11:25:07Z @@ -31421,9 +31435,9 @@ namespace: zebrafish_anatomy def: "Mesoderm part of the head." [GOC:cvs, ORCiD:0000-0002-2244-7917\,] is_a: ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0000414 ! presumptive cephalic mesoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2016-01-14T02:01:33Z @@ -31434,9 +31448,9 @@ namespace: zebrafish_anatomy def: "Rostral cell mass bordering the pretectum. The cells are stained with the gene nurod and are Hu positive. The region is named for its presumed homology to the avian griseum tectale." [ZFIN:ZDB-PUB-070711-1] synonym: "tectal grey " EXACT [] is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2016-01-22T12:54:41Z @@ -31446,9 +31460,9 @@ name: cerebellar plate namespace: zebrafish_anatomy def: "Multi-tissue structure that is made up of the external granular layer and the ventral proliferative layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2016-02-02T11:33:30Z @@ -31458,9 +31472,9 @@ name: cerebellar plate ventral proliferative layer namespace: zebrafish_anatomy def: "Proliferative zone on the ventral side of the cerebellar plate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005869 ! cerebellar plate -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2016-02-02T11:45:44Z @@ -31470,9 +31484,9 @@ name: region of the nucleus of the medial longitudinal fascicle namespace: zebrafish_anatomy def: "Portion of tissue in the midbrain that will develop into the nucleus of the medial longitudinal fasciculus synencephalon." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2016-02-02T11:47:50Z @@ -31483,9 +31497,9 @@ def: "Proliferative region that forms on peripheral side of the cerebellar plate synonym: "cerebellar plate peripheral proliferative zone" RELATED [] synonym: "EGL" EXACT [] is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005869 ! cerebellar plate -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2016-02-02T11:50:39Z @@ -31498,8 +31512,8 @@ subset: cell_slim xref: CL:0008025 is_a: ZFA:0009214 ! norepinephrine secreting cell is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-03-22T02:18:57Z @@ -31508,10 +31522,11 @@ id: ZFA:0005874 name: spiral neuron namespace: zebrafish_anatomy def: "Spiral neurons are excitatory interneurons located in rhombomere 3 and have contralateral projections that cross the midline forming commissures in rhombomere 3. After crossing the midline the two commissures fuse and project caudally synapsing with the Mauthner neuron. As they enter the axon cap, spiral fiber neurons lose their myelin and wrap around the axon hillock in a stereotyped spiral, where they make both electrical and glutamatergic synapses on the M cell axon close to the M-cell soma and with one another. Spiral neurons produced biphasic excitatory postsynaptic potentials (EPSPs) in the contralateral M-cell with a short latency." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010711-2, ZFIN:ZDB-PUB-110110-13, ZFIN:ZDB-PUB-150512-4] +subset: cell_slim is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-03-23T01:14:15Z @@ -31524,9 +31539,9 @@ comment: This tract was originally identified in zebrafish by Wilson et al., 199 synonym: " TCPT" EXACT [ZFIN:ZDB-PUB-961014-1268] synonym: "tract of the commissure of the posterior tuberculum" EXACT [] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000491 ! commissure of the caudal tuberculum -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2016-06-07T10:08:17Z @@ -31536,9 +31551,9 @@ name: anterior chamber eye namespace: zebrafish_anatomy def: "The space between the cornea and lens in the anterior segment of the eye where the aqueous humor is located." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-10-13T15:42:03Z @@ -31549,8 +31564,8 @@ namespace: zebrafish_anatomy def: "Commissure that is formed by a subset of TCPT axons that cross the midline in the diencephalon. The TCPTc does not appear to cross with other commissures. The initial crossing of the TCPTc occurs at approximately 36 hpf." [GOC:cvs, GOC:dsf, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120419-3.] synonym: "Commissure of the TCPT" EXACT [] is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2016-10-18T10:07:14Z @@ -31559,11 +31574,12 @@ id: ZFA:0005878 name: oogonia namespace: zebrafish_anatomy def: "An undifferentiated germ cell that proliferates rapidly and gives rise to oocytes. In zebrafish oogonia are round cells, with centrally located nucleoli, which are strongly basophilic. Oogonia in larva zebrafish fish are often found in clusters of two or four cells, corresponding to the second, or third oogonial divisions, presumably arising from mitotic divisions of primordial germ cells." [GOC:cvs, GOC:tfm, ISBN:0721662544, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120718-30] +subset: cell_slim xref: CL:0000024 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000413 ! gonad -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-12-14T12:05:24Z @@ -31575,9 +31591,9 @@ def: "Tubules formed by the seminiferous epithelium that contains spermatogenic synonym: "seminiferous tubules" EXACT PLURAL [] synonym: "sperm duct" BROAD [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-04-28T11:17:00Z @@ -31587,9 +31603,9 @@ name: seminiferous epithelium namespace: zebrafish_anatomy def: "Epithelium that lines the seminiferous tubules." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:39:16Z @@ -31599,9 +31615,9 @@ name: tunica propria of seminiferous tubule namespace: zebrafish_anatomy def: "The membranous sheath that surrounding the seminiferous tubule." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:44:18Z @@ -31611,9 +31627,9 @@ name: spermatogenic cyst namespace: zebrafish_anatomy def: "Structure in the testis formed by cytoplasmic projections of one or two Sertoli cells that surround a single spermatogonium. Sperm production occurs with in the cyst and the spermatogonium divides to generate approximately 1300 mature sperm. A given Sertoli cell is in contact with only one germ cell clone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:48:48Z @@ -31623,9 +31639,9 @@ name: tunica albuginea testis namespace: zebrafish_anatomy def: "Membranous sheath that surrounds the testis." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:51:24Z @@ -31635,9 +31651,9 @@ name: seminiferous tubule lumen namespace: zebrafish_anatomy def: "Lumen of the seminiferous tubule. Mature sperm is stored in the tubular lumen." [GOC:cvs, https://en.wikibooks.org/wiki/The_Zebrafish_in_Toxicology/Spermatogenesis, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2017-05-16T13:18:07Z @@ -31647,8 +31663,8 @@ name: operculohyoid ligament namespace: zebrafish_anatomy def: "Ligament that connects the anterior apex of the opercle to the posterior end of the ceratohyal. The ligament extends orthogonal and anterior to the opercle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-161030-16] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec creation_date: 2017-06-12T13:27:26Z [Term] @@ -31658,9 +31674,9 @@ namespace: zebrafish_anatomy def: "Cartilage that attaches the parachordal cartilage to the auditory capsule anterior to the basicapsular fenestra. The anterior basicapsular commissure are paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "anterior basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2017-10-20T11:38:57Z @@ -31671,9 +31687,9 @@ namespace: zebrafish_anatomy def: "Cartilage that attaches the parachordal cartilage to the auditory capsule posterior of the basicapsular fenestra. The posterior basicapsular commissure are paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "posterior basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2017-10-20T11:42:11Z @@ -31685,9 +31701,9 @@ def: "Cartilage that grows from the auditory capsule medially toward the anterio synonym: " lateral basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] synonym: "lateral commissure " RELATED [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2017-10-20T11:51:14Z @@ -31698,8 +31714,8 @@ namespace: zebrafish_anatomy def: "Syndesmosis that connects the posterior lateral edge of the epiotic to the posttemporal. The epiotic-posttemporal joint is paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "epioccipital-posttemporal joint" EXACT [] is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T15:00:45Z @@ -31709,8 +31725,8 @@ name: carotid artery canal namespace: zebrafish_anatomy def: "Canal where the carotid artery enters the cranium. Located between the parasphenoid and prootic bones in adult fish." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-25T14:53:32Z @@ -31721,8 +31737,8 @@ namespace: zebrafish_anatomy def: "Syndesmosis that connects the anterior edge epiotic to the parietal. The epiotic-parietal joint is paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "epioccipital-parietal" EXACT [] is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T15:30:23Z @@ -31733,8 +31749,8 @@ namespace: zebrafish_anatomy def: "Foramen that has the exoccipital as the anterior and dorsal rim. The occipital forms the anterior rim during early development." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "lateral occipital foramina" EXACT PLURAL [ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T16:00:30Z @@ -31744,8 +31760,8 @@ name: glossopharyngeal foramen namespace: zebrafish_anatomy def: "Foramen in the exoccipital through which the glossopharyngeal nerve (cranial nerve IX) passes." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T16:05:15Z @@ -31755,8 +31771,8 @@ name: vagus foramen namespace: zebrafish_anatomy def: "Foramen in the exoccipital through which the vagus nerve (cranial nerve X) passes." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T16:06:35Z @@ -31767,8 +31783,8 @@ namespace: zebrafish_anatomy def: "Chamber in the prootic where the trunks of the trigeminal facial nerve complex pass from the brain to the outside of the cranium. In the adult, a posteromedial extension from the prootic delimits the medial boundary of the trigeminal-facial chamber. The anterior opening of the trigeminal-facial chamber lies between the prootic and the pterosphenoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "trigeminofacialis chamber" EXACT [] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-27T16:53:59Z @@ -31780,9 +31796,9 @@ def: "Longitudinal unpaired muscle that attaches to the base of the most poster synonym: "infracarinalis posterior" EXACT [ZFIN:ZDB-PUB-151106-17, ZFIN:ZDB-PUB-180212-2] synonym: "retractor analis" EXACT [ZFIN:ZDB-PUB-171118-8] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2018-02-12T10:14:25Z @@ -31794,9 +31810,9 @@ def: "Longitudinal muscle that on the anterior end is continuous with the retra synonym: "infracarinalis medius" RELATED [ZFIN:ZDB-PUB-151106-17, ZFIN:ZDB-PUB-180212-2] synonym: "protractor analis" EXACT [ZFIN:ZDB-PUB-171118-8] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2018-02-12T10:37:38Z @@ -31807,9 +31823,9 @@ namespace: zebrafish_anatomy def: "Tissue that lies between the caudal artery and the caudal vein plexus where definitive hematopoiesis occurs after 48hpf and before the hematopoietic progenitors migrate to the thymus and kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-061227-29, ZFIN:ZDB-PUB-070303-37] synonym: "posterior blood island" RELATED [ZFIN:ZDB-PUB-070303-37] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2018-02-21T12:40:50Z @@ -31819,9 +31835,9 @@ name: scale focus namespace: zebrafish_anatomy def: "The initial growth point of the scale. In zebrafish the focus is on the anterior edge of the scale." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180311-2] is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-08-30T16:47:45Z @@ -31832,9 +31848,9 @@ namespace: zebrafish_anatomy def: "Grooves on the scale radiating from the focus. Zebrafish have primary radii that start at the focus and extend to the posterior margin of the scale." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180311-2] synonym: "scale radii" EXACT PLURAL [] is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-08-30T16:50:48Z @@ -31845,9 +31861,9 @@ namespace: zebrafish_anatomy def: "Transient groove in the dorsal eye lined by basal lamina. The groove extends across the dorsal retina to partially separate the nasal and temporal retinal lobes. The sulcus forms soon after optic cup formation and as the eye develops it becomes broader and shallower until it is undetectable." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180310-10] synonym: "dorsal ocular sulcus" EXACT [] is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Ceri creation_date: 2018-09-05T16:23:34Z @@ -31858,9 +31874,9 @@ namespace: zebrafish_anatomy def: "A medial cartilaginous spur that develops from the dorsomedial edge of the palatoquadrate. It is derived from cells located in the maxillary prominence of the first pharyngeal arch and gives rise to the metapterygoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100726-23, ZFIN:ZDB-PUB-961014-192] synonym: "Ptp" RELATED [] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001399 ! palatoquadrate cartilage -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2018-09-12T09:53:49Z @@ -31870,8 +31886,8 @@ name: cartilaginous projection namespace: zebrafish_anatomy def: "Skeletal tissue that is an extension of a skeletal element composed of cartilage." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-09-12T10:11:35Z @@ -31881,9 +31897,9 @@ name: retroarticular process namespace: zebrafish_anatomy def: "A protrusion of cartilage at the posteroventral tip of Meckel's cartilage that gives rise to the retroarticular." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-161203-3] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0001205 ! Meckel's cartilage -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-09-12T10:37:59Z @@ -31894,9 +31910,9 @@ namespace: zebrafish_anatomy def: "Cartilaginous protrusion on the posterodorsal region of Meckel's cartilage. The coronoid process of Meckel's cartilage forms the dorsal portion of the articulation with the anteroventral corner of the palatoquadrate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060724-1, ZFIN:ZDB-PUB-161203-3] synonym: " coronoid process of Meckel's cartilage" EXACT [] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001205 ! Meckel's cartilage -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-09-12T14:26:48Z @@ -31906,9 +31922,9 @@ name: Reissner's fiber namespace: zebrafish_anatomy def: "Thread-like fibrous aggregation of secreted molecules extending from the subcommissural organ (SCO) through the ventricular system and central canal to the end of the spinal cord." [GOC:cvs, ISBN:978-0471888895, ZFIN:ZDB-PUB-980205-16] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000938 ! central canal -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2018-11-29T11:06:47Z @@ -31920,9 +31936,9 @@ def: "Neuronal tissue that is the arborization field for the majority of the gan synonym: "synaptic neuropil " RELATED [ZFIN:ZDB-PUB-101101-16] synonym: "tectial lamina" RELATED [ZFIN:ZDB-PUB-081218-37] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2019-01-28T17:08:19Z @@ -31933,8 +31949,8 @@ namespace: zebrafish_anatomy def: "Region the larval brain that is a forerunner of the adult central and superficial pretectal regions. This region is non ventricular neural proliferation zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-030115-8, ZFIN:ZDB-PUB-990406-3] synonym: "M1" EXACT [ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2019-01-29T16:22:51Z @@ -31947,8 +31963,8 @@ synonym: "early migrated posterior tubercular region" RELATED [ZFIN:ZDB-PUB-0707 synonym: "M2" RELATED [ZFIN:ZDB-PUB-070711-1] synonym: "preglomerular anlagen " RELATED [ZFIN:ZDB-PUB-020912-2] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2019-01-29T16:37:24Z @@ -31959,8 +31975,8 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is presumed to give rise to the entopenduncular nucleus." [ZFIN:ZDB-PUB-040304-8, ZFIN:ZDB-PUB-090914-27] synonym: "M3" NARROW [] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2019-01-30T13:02:59Z @@ -31972,8 +31988,8 @@ def: "Portion of tissue that gives rise to the lateral nucleus of the ventral te synonym: "lateral nucleus of area ventralis telencepha" RELATED [ZFIN:ZDB-PUB-090814-14] synonym: "M4" RELATED [ZFIN:ZDB-PUB-090814-14] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2019-01-30T13:42:52Z @@ -31984,9 +32000,9 @@ namespace: zebrafish_anatomy def: "Pouch at the end of the endolymphatic duct that helps regulates pressure on the inner ear. The endolymphatic sac is separated from the endolymphatic duct by a dynamic lamellar barrier. The lamellar barrier is composed of long, thin lamellar sheets that form tongue-and-groove structure or interwoven broadly overlapping structures. In adults, the endolymphatic duct and sac are partially encased within the temporal bone such that the distal end of the endolymphatic sac protrudes out of the temporal bone into the cranial cavity ." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180622-24] xref: TAO:0002194 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown creation_date: 2019-04-16T14:25:54Z [Term] @@ -31995,8 +32011,8 @@ name: urine namespace: zebrafish_anatomy def: "Organism substance that is the output of the nephron." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050818-17] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2019-05-02T16:21:42Z [Term] @@ -32007,9 +32023,9 @@ def: "Iridophore layer of iris composed of a outer layer of regularly tiled iri synonym: "argenta " EXACT PLURAL [] synonym: "iridophore layer iris" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2019-05-29T15:43:36Z @@ -32019,9 +32035,9 @@ name: iris melanophore layer namespace: zebrafish_anatomy def: "Layer of melanophores that are positioned behind the argenta. The melanophore layer absorbs unfocused light preventing it from reaching the retina." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180822-3] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2019-05-29T15:55:27Z @@ -32032,9 +32048,9 @@ namespace: zebrafish_anatomy def: "Iridophore layer that forms along the dorsal region of the poster segment of the eye. The tapetum is formed by a single layer of Iridophores and is proximal to the photoreceptors and is located in the choroid. The tapetum reflects photons back to the photoreceptors if they were not initially absorbed by the photoreceptors." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180822-3] synonym: "tapetum cellulosum" RELATED [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2019-05-29T16:15:09Z @@ -32045,8 +32061,8 @@ namespace: zebrafish_anatomy def: "Neuromast where the paired hair cells are polarized along the anterior-posterior body axis." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-061205-16] synonym: "anteroposterior oriented neuromast" RELATED [] is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-06-18T10:40:23Z @@ -32057,8 +32073,8 @@ namespace: zebrafish_anatomy def: "Neuromast where the paired hair cells are polarized along the dorsal-ventral body axis." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-061205-16] synonym: "dorsoventral oriented neuromast" RELATED [] is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-06-18T10:44:49Z @@ -32071,8 +32087,8 @@ synonym: "perpendicular posterior lateral line neuromast" EXACT [ZFIN:ZDB-PUB-04 is_a: ZFA:0000940 ! posterior lateral line neuromast is_a: ZFA:0005918 ! dorsal-ventral polarized neuromast relationship: develops_from ZFA:0005116 ! secondary posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec created_by: ceriv creation_date: 2020-06-18T10:46:54Z @@ -32085,8 +32101,8 @@ synonym: "parallel posterior lateral line neuromast" RELATED [ZFIN:ZDB-PUB-04091 is_a: ZFA:0000940 ! posterior lateral line neuromast is_a: ZFA:0005917 ! anterior-posterior polarized neuromast relationship: develops_from ZFA:0005115 ! primary posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-06-18T10:53:53Z @@ -32099,8 +32115,8 @@ subset: cell_slim synonym: "migratory mesenchymal precursor " EXACT [ZFIN:ZDB-PUB-001205-1] synonym: "MMP" RELATED [] is_a: ZFA:0009291 ! muscle precursor cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000027 ! segmentation:20-25 somites creation_date: 2020-07-01T10:51:34Z [Term] @@ -32109,8 +32125,8 @@ name: migratory muscle precursor stream namespace: zebrafish_anatomy def: "Groups of migratory muscle precursor that migrate from a conserved origination in concerted manner along stereotyped path." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: ceriv creation_date: 2020-07-01T11:06:26Z @@ -32121,8 +32137,8 @@ namespace: zebrafish_anatomy def: "Muscle precursor stream that originates from the ventral regions of somites 1-3 and migrates anterior of the pectoral fin bud. Migratory muscle precursor from this stream form the esophageal striated muscle and sternohyoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-130709-61] synonym: "first migratory stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:10:27Z @@ -32133,8 +32149,8 @@ namespace: zebrafish_anatomy def: "Muscle precursor stream that originates from the ventral regions of somites 2-4 and migrates toward the pectoral fin bud. Migratory muscle precursors from this stream contribute to the pectoral fin musculature and make a small contribution to the posterior hypaxial muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-190808-2] synonym: "middle migratory muscle precursor stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:14:03Z @@ -32145,8 +32161,8 @@ namespace: zebrafish_anatomy def: "Migratory muscle precursor stream that originates from the ventral regions of somites 5-7 that migrates posterior to the pectoral fin bud. Migratory muscle precursors from this stream form the posterior hypaxial muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-190427-4] synonym: "third migratory stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:17:29Z @@ -32160,10 +32176,10 @@ synonym: "inferior obliquus muscle" BROAD [ZFIN:ZDB-PUB-020913-1] synonym: "PHM" RELATED [] synonym: "ventral-most hypaxial muscle " EXACT [ZFIN:ZDB-PUB-010924-1] is_a: ZFA:0000362 ! hypaxialis -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: has_developmental_contribution_from ZFA:0005924 ! middle migratory muscle precursor stream relationship: has_developmental_contribution_from ZFA:0005925 ! posterior migratory muscle precursor stream -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: ceriv creation_date: 2020-07-01T11:21:03Z @@ -32173,8 +32189,8 @@ name: endothelial blood brain barrier namespace: zebrafish_anatomy def: "Blood vessel endothelium that restricts the passage of circulating substances from the blood to the brain parenchyma while actively facilitating the passage of nutrients and removal of waste products. The developing blood brain barrier undergoes a period of transcytosis and leaks that decrease as the mature form is established. The barrier matures in a posterior to anterior direction." [GOC:cvs, ORCID:000-0002-2244-7917, ZFIN:ZDB-PUB-190821-6] is_a: ZFA:0005259 ! continuous blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth creation_date: 2020-07-30T10:25:52Z [Term] @@ -32185,8 +32201,8 @@ def: "Lecophores that develop from melanophores. Melanoleucophore are located at subset: cell_slim is_a: ZFA:0009261 ! leucophore relationship: develops_from ZFA:0009091 ! melanocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2020-11-04T13:46:59Z [Term] @@ -32198,8 +32214,8 @@ comment: ZDB-PUB-190912-11 mentions that on the 8th day of development Yellow subset: cell_slim is_a: ZFA:0009261 ! leucophore relationship: develops_from ZFA:0009198 ! xanthophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-11-04T14:18:50Z @@ -32209,8 +32225,8 @@ name: lumen namespace: zebrafish_anatomy def: "Anatomical space within a tubular organ, duct, or vessel." [GOC:cvs, https:en.org/wiki/Lumen_(anatomy), ORCID:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2020-11-20T13:39:11Z [Term] @@ -32219,8 +32235,8 @@ name: vascular plexus namespace: zebrafish_anatomy def: "Nonhierarchical network of interconnected vessels. May be the primitive state of a mature vascular structure." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-150418-3] is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: ceriv creation_date: 2020-11-20T14:12:43Z @@ -32230,8 +32246,8 @@ name: developmental vascular plexus namespace: zebrafish_anatomy def: "Transient plexus formed by vasculogenesis that results in the formation of an intermediate network of similar sized vessels with polygonal-shaped avascular spaces. As the vasculature matures it is remodeled into a hierarchical vascular tree." [GOC:cvs, ORCID:0000-0002-2244-7917, PMID:23799579, ZFIN:ZDB-PUB-150418-3] is_a: ZFA:0005931 ! vascular plexus -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: ceriv creation_date: 2020-11-20T14:29:48Z @@ -32243,8 +32259,8 @@ def: "Stable vascular plexus that persist in the adult animal." [GOC:cvs, ORCID: synonym: "capillary plexus" EXACT [] synonym: "mature vascular plexus" EXACT [] is_a: ZFA:0005931 ! vascular plexus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-11-20T14:32:44Z @@ -32255,8 +32271,8 @@ namespace: zebrafish_anatomy def: "Non stereotyped venous plexus derived from specialised angioblast that originate in the floor of the posterior cardinal vein. Emerges from the duct of Cuvier at 2dpf as a reticular structure that spreads bilaterally over the surface of the yolk and gut." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-150418-3, ZFIN:ZDB-PUB-151021-20, ZFIN:ZDB-PUB-151104-9] synonym: "subintestinal plexus" EXACT [] is_a: ZFA:0005931 ! vascular plexus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T14:35:56Z @@ -32268,8 +32284,8 @@ def: "Subintestinal venous plexus that wraps the yolk. Anterior vessels connecte synonym: "yolk plexus" RELATED [] is_a: ZFA:0005932 ! developmental vascular plexus is_a: ZFA:0005934 ! subintestinal venous plexus -relationship: end ZFS:0000039 ! Larval:Days 7-13 -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000039 ! larval:days 7-13 +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T14:41:40Z @@ -32280,8 +32296,8 @@ namespace: zebrafish_anatomy def: "Plexus that wraps the anterior digestive system. These vessels form the permanent, superficial vessels of the digestive system. The left subintestinal vein regresses and empties into the right subintestinal vein." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-151021-20] is_a: ZFA:0005933 ! mature plexus is_a: ZFA:0005934 ! subintestinal venous plexus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: ceriv creation_date: 2020-11-20T14:43:36Z @@ -32292,9 +32308,9 @@ namespace: zebrafish_anatomy def: "Vessels that form connections between the sub intestinal vein and the supraintestinal artery. There are fewer ICVs on the right side of the fish due to the asymmetrical development of the subintestinal veins." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-151104-9] synonym: "ICV" RELATED [] is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005934 ! subintestinal venous plexus -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T15:14:22Z @@ -32304,8 +32320,8 @@ name: inter-organ blood vessel namespace: zebrafish_anatomy def: "Blood vessel that bridge between organs." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-130710-65] is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2020-12-02T09:24:58Z [Term] @@ -32314,8 +32330,8 @@ name: liver pancreas connecting vessel namespace: zebrafish_anatomy def: "Blood vessels that bridge between the liver and pancreas. Four of these vessels have been described, called V1 LP-V4LP. The vessels may be transient or permanent and may make direct or indirect connections between the organ vasculature." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-130710-65] is_a: ZFA:0005938 ! inter-organ blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-02T09:30:41Z @@ -32325,8 +32341,8 @@ name: fibrocartilaginous callus namespace: zebrafish_anatomy def: "Temporary regenerating structure composed of chondrocytes and fibroblast that stabilizes the bone ends at a fracture site. The fibrocartilagionous callus surrounds the bone ends." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190807-16] is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2021-01-27T10:34:06Z [Term] @@ -32336,8 +32352,8 @@ namespace: zebrafish_anatomy def: "Temporary regenerating structure wider than the original bone composed of osteoblast and mineralized tissue that replaces the fibrocartilagenous callus at a bone fracture site. The bone callus is eventually remodeled to be the width of the surrounding bone." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190807-16] is_a: ZFA:0005147 ! regenerating tissue relationship: develops_from ZFA:0005940 ! fibrocartilaginous callus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2021-01-27T10:38:07Z @@ -32345,12 +32361,25 @@ creation_date: 2021-01-27T10:38:07Z id: ZFA:0005942 name: lysosome-rich enterocyte namespace: zebrafish_anatomy -def: "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes ." [GOC:cvs, ORCID:0000-0002-1009-339X, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190903-3] +def: "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes ." [GOC:cvs, ORCID:0000-0002-1009-339X, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190903-3] subset: cell_slim is_a: ZFA:0009269 ! enterocyte +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2021-01-27T10:44:40Z +[Term] +id: ZFA:0005943 +name: perivitelline fluid +namespace: zebrafish_anatomy +def: "Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance." [ZFIN:ZDB-PUB-200910-2] +is_a: ZFA:0000020 ! extraembryonic structure +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000001 ! zygote:1-cell +created_by: ceriv +creation_date: 2021-03-25T15:52:05Z + [Term] id: ZFA:0005944 name: mural cell @@ -32359,12 +32388,174 @@ def: "Cells that localize on the abluminal side of the vascular endothelium that subset: cell_slim xref: CL:0008034 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: ceriv creation_date: 2021-01-27T11:37:04Z +[Term] +id: ZFA:0005945 +name: long double cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "red-sensitive cone cell" EXACT [ZFIN:ZDB-PUB-990520-1] +synonym: "unequal double cone cell" RELATED [ZFIN:ZDB-PUB-961014-677] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec +creation_date: 2021-07-09T09:06:25Z + +[Term] +id: ZFA:0005946 +name: short double cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "green-sensitive cone" EXACT [ZFIN:ZDB-PUB-990520-1] +synonym: "unequal double cone cell" RELATED [ZFIN:ZDB-PUB-961014-677] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec +created_by: ceriv +creation_date: 2021-07-09T10:53:10Z + +[Term] +id: ZFA:0005947 +name: long single cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "blue-sensitive cone cell" EXACT [ZFIN:ZDB-PUB-990520-1] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-07-09T11:01:04Z + +[Term] +id: ZFA:0005948 +name: short single cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "ultraviolet-sensitive cone" EXACT [] +synonym: "UV-sensitive cone" EXACT [ZFIN:ZDB-PUB-990520-1] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-07-09T11:10:25Z + +[Term] +id: ZFA:0005949 +name: heart lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the heart." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0005844 ! lymph vessel +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0005952 ! heart lymphatic system +relationship: start ZFS:0000041 ! larval:days 21-29 +creation_date: 2021-08-13T11:47:35Z + +[Term] +id: ZFA:0005950 +name: bulbus arteriosus lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +synonym: "outflow tract lymph vessel" EXACT [] +is_a: ZFA:0005949 ! heart lymph vessel +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0000173 ! bulbus arteriosus +relationship: start ZFS:0000041 ! larval:days 21-29 +created_by: ceriv +creation_date: 2021-08-13T11:53:55Z + +[Term] +id: ZFA:0005951 +name: cardiac ventricle lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0005949 ! heart lymph vessel +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0000009 ! cardiac ventricle +relationship: start ZFS:0000043 ! juvenile:days 45-89 +created_by: ceriv +creation_date: 2021-08-13T11:58:24Z + +[Term] +id: ZFA:0005952 +name: heart lymphatic system +namespace: zebrafish_anatomy +def: "Lymphatic system of the heart." [GOC:CVS, ORCID:0000-0002-2244-7917] +is_a: ZFA:0005811 ! heart vasculature +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T12:23:44Z + +[Term] +id: ZFA:0005953 +name: coronary capillary plexus +namespace: zebrafish_anatomy +def: "Capillary plexus that is located in the heart." [GOC:cvs, ORCID:0000-0002-2244-7917] +is_a: ZFA:0005811 ! heart vasculature +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T12:26:17Z + +[Term] +id: ZFA:0005954 +name: cardiac lymphatic endothelial cluster +namespace: zebrafish_anatomy +def: "Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +synonym: "isolated lymph endothelial cells" EXACT [] +is_a: ZFA:0005955 ! lymphatic endothelial cluster +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0005952 ! heart lymphatic system +relationship: start ZFS:0000043 ! juvenile:days 45-89 +created_by: ceriv +creation_date: 2021-08-13T12:30:04Z + +[Term] +id: ZFA:0005955 +name: lymphatic endothelial cluster +namespace: zebrafish_anatomy +def: "Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0000385 ! lymphatic system +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T12:53:02Z + +[Term] +id: ZFA:0005956 +name: germline stem cell +namespace: zebrafish_anatomy +def: "A stem cell that can give rise to cell types of the germ-line." [ORCID:0000-0002-4142-7153] +subset: cell_slim +xref: CL:0000014 +is_a: ZFA:0005957 ! stem cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T13:44:39Z + +[Term] +id: ZFA:0005957 +name: stem cell +namespace: zebrafish_anatomy +def: "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells." [GOC:tfm] +subset: cell_slim +xref: CL:0000034 +is_a: ZFA:0009000 ! cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T13:47:16Z + [Term] id: ZFA:0006000 name: intermediate hypothalamus @@ -32373,9 +32564,9 @@ def: "Brain structure that lies perpendicular to the longitudinal axis of the em synonym: "Hi" EXACT [] xref: TAO:0006000 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: giles creation_date: 2009-03-26T02:23:30Z @@ -32388,9 +32579,9 @@ synonym: "saccular macula" EXACT [] xref: TAO:0007000 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000428 ! saccule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007001 @@ -32402,9 +32593,9 @@ synonym: "dorsorostral cluster" EXACT [] synonym: "drc" EXACT [] xref: TAO:0007001 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0007002 @@ -32416,9 +32607,9 @@ synonym: "ventrorostral cluster" EXACT [] synonym: "vrc" EXACT [] xref: TAO:0007002 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007003 @@ -32430,9 +32621,9 @@ synonym: "ventral caudal cluster" EXACT [] synonym: "ventrocaudal cluster" EXACT [] xref: TAO:0007003 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007004 @@ -32442,9 +32633,9 @@ def: "Early-developing neuronal cluster of the epiphysis. By 24 hpf the pioneer synonym: "ec" EXACT [] xref: TAO:0007004 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000019 ! epiphysis -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007005 @@ -32456,9 +32647,9 @@ synonym: "haemal prezygapophysis" EXACT [] synonym: "hemal prezygopophysis" EXACT [] xref: TAO:0007005 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000519 ! hemal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007006 @@ -32468,9 +32659,9 @@ def: "Surface structure that is one of the fleshy folds surrounding the opening synonym: "lips" EXACT PLURAL [] xref: TAO:0007006 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000547 ! mouth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007008 @@ -32482,8 +32673,8 @@ synonym: "ventral intermandibulari anterior" EXACT PLURAL [] xref: TAO:0007008 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007009 @@ -32493,9 +32684,9 @@ def: "A portion of tissue which is a fasciculated group of axons. Many time axon synonym: "nerves" EXACT PLURAL [] xref: TAO:0007009 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007010 @@ -32505,9 +32696,9 @@ def: "Part of the forebrain that is ventral to the ventral thalamus and dorsal t synonym: "eminentia thalami" EXACT [] xref: TAO:0007010 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007011 @@ -32518,9 +32709,9 @@ synonym: "rX" EXACT [] synonym: "vagus root" EXACT [] xref: TAO:0007011 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000453 ! cranial nerve X -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007012 @@ -32531,9 +32722,9 @@ synonym: "fasciculus lateralis telencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "lateral forebrain bundles" EXACT PLURAL [] xref: TAO:0007012 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007013 @@ -32543,8 +32734,8 @@ def: "Non neural ectoderm that surrounds the presumptive neural plate and gives synonym: "panplacodal ectoderm" EXACT [ZFIN:ZDB-PUB-070122-31] xref: TAO:0007013 is_a: ZFA:0001178 ! non neural ectoderm -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0007014 @@ -32553,9 +32744,9 @@ namespace: zebrafish_anatomy def: "Rostral portion of embryonic tissue that gives rise to the anterior neural plate." [GOC:mh, GOC:ymb, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-9900-7880] xref: TAO:0007014 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0007015 @@ -32564,9 +32755,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of embryonic tissue that gives rise to the posterior neural plate." [GOC:mh, GOC:ymb, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-9900-7880] xref: TAO:0007015 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0007016 @@ -32576,9 +32767,9 @@ def: "Rostral portion of the neural plate. Develops into the anterior neural ke xref: TAO:0007016 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007014 ! anterior presumptive neural plate -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0007017 @@ -32588,9 +32779,9 @@ def: "Posterior portion of the neural plate that gives rise to the posterior ne xref: TAO:0007017 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007015 ! posterior presumptive neural plate -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007018 @@ -32600,9 +32791,9 @@ def: "Anterior portion of anterior neural plate that gives rise to the forebrain xref: TAO:0007018 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000062 ! presumptive forebrain -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007019 @@ -32612,9 +32803,9 @@ def: "Portion of neural plate that gives rise to the midbrain neural keel." [GO xref: TAO:0007019 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000148 ! presumptive midbrain -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007020 @@ -32625,9 +32816,9 @@ synonym: "diencephalic-mesencephalic boundary neural plate" EXACT [] xref: TAO:0007020 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001368 ! presumptive forebrain midbrain boundary -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007021 @@ -32637,9 +32828,9 @@ def: "Portion of the posterior neural plate that gives rise to the spinal cord n xref: TAO:0007021 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000417 ! presumptive spinal cord -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007022 @@ -32649,9 +32840,9 @@ def: "Portion of posterior neural plate that gives rise to the hindbrain neural xref: TAO:0007022 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000569 ! presumptive hindbrain -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007023 @@ -32661,9 +32852,9 @@ def: "Posterior portion of the neural keel that gives rise to the posterior neur xref: TAO:0007023 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007017 ! posterior neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007024 @@ -32673,9 +32864,9 @@ def: "Rostral portion of the neural keel. Develops into the anterior neural rod xref: TAO:0007024 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007016 ! anterior neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007025 @@ -32685,9 +32876,9 @@ def: "Portion of neural keel that gives rise to the midbrain neural rod." [GOC: xref: TAO:0007025 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007019 ! midbrain neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007026 @@ -32697,9 +32888,9 @@ def: "Anterior portion of anterior neural keel that gives rise to the forebrain xref: TAO:0007026 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007018 ! forebrain neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007027 @@ -32710,9 +32901,9 @@ synonym: "diencephalic-mesencephalic boundary neural keel" EXACT [] xref: TAO:0007027 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007020 ! forebrain midbrain boundary neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007028 @@ -32721,9 +32912,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural keel that gives rise to the spinal cord neural rod." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007028 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007029 @@ -32733,9 +32924,9 @@ def: "Portion of posterior neural keel that gives rise to the hindbrain neural r xref: TAO:0007029 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007022 ! hindbrain neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007030 @@ -32745,9 +32936,9 @@ def: "Posterior portion of the neural rod that gives rise to the posterior neura xref: TAO:0007030 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007023 ! posterior neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007031 @@ -32757,9 +32948,9 @@ def: "Rostral portion of the neural rod. Develops into the anterior neural tube xref: TAO:0007031 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007024 ! anterior neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007032 @@ -32769,9 +32960,9 @@ def: "Portion of neural rod that gives rise to the midbrain neural tube." [GOC xref: TAO:0007032 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007025 ! midbrain neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007033 @@ -32782,9 +32973,9 @@ synonym: "diencephalic-mesencephalic boundary neural rod" EXACT [] xref: TAO:0007033 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007027 ! forebrain midbrain boundary neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007034 @@ -32794,9 +32985,9 @@ def: "Anterior portion of anterior neural rod that gives rise to the forebrain n xref: TAO:0007034 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007026 ! forebrain neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007035 @@ -32805,9 +32996,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural rod that gives rise to the spinal cord neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007035 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007036 @@ -32817,9 +33008,9 @@ def: "Portion of posterior neural rod that gives rise to the hindbrain neural tu xref: TAO:0007036 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007029 ! hindbrain neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007037 @@ -32829,9 +33020,9 @@ def: "Posterior portion of the neural tube that gives rise to the hindbrain and xref: TAO:0007037 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007030 ! posterior neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007038 @@ -32841,9 +33032,9 @@ def: "Rostral portion of the neural tube." [GOC:mh, GOC:ymb, ORCiD:0000-0001-911 xref: TAO:0007038 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007031 ! anterior neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007039 @@ -32853,9 +33044,9 @@ def: "Portion of neural tube that gives rise to the midbrain." [GOC:mh, GOC:ymb xref: TAO:0007039 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007032 ! midbrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007040 @@ -32866,9 +33057,9 @@ synonym: "diencephalic-mesencephalic boundary neural tube" EXACT [] xref: TAO:0007040 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007033 ! forebrain midbrain boundary neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007041 @@ -32878,9 +33069,9 @@ def: "Anterior portion of anterior neural rod that gives rise to the forebrain." xref: TAO:0007041 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007034 ! forebrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007042 @@ -32889,9 +33080,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural tube that gives rise to the spinal cord." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007042 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007043 @@ -32901,9 +33092,9 @@ def: "Portion of posterior neural tube that gives rise to the hindbrain." [GOC:m xref: TAO:0007043 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007036 ! hindbrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007044 @@ -32914,9 +33105,9 @@ synonym: "midbrain-hindbrain boundary neural plate" EXACT [] xref: TAO:0007044 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001187 ! presumptive midbrain hindbrain boundary -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007045 @@ -32927,9 +33118,9 @@ synonym: "midbrain-hindbrain boundary neural keel" EXACT [] xref: TAO:0007045 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007044 ! midbrain hindbrain boundary neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007046 @@ -32940,9 +33131,9 @@ synonym: "midbrain-hindbrain boundary neural rod" EXACT [] xref: TAO:0007046 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007045 ! midbrain hindbrain boundary neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007047 @@ -32953,9 +33144,9 @@ synonym: "midbrain-hindbrain boundary neural tube" EXACT [] xref: TAO:0007047 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007046 ! midbrain hindbrain boundary neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007048 @@ -32967,8 +33158,8 @@ synonym: "ventral intermandibulari posterior" EXACT PLURAL [] xref: TAO:0007048 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007049 @@ -32978,8 +33169,8 @@ def: "Is a mandibular muscle that forms along the palatoquadrates and inserts on synonym: "dorsal adductor mandibulae" EXACT [] xref: TAO:0007049 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000041 ! Larval:Days 21-29 -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000041 ! larval:days 21-29 +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0007050 @@ -32989,8 +33180,8 @@ def: "Dorsal subdivision of the putative mandibular muscle plate. Splits into th synonym: "constrictors dorsalis" EXACT PLURAL [] xref: TAO:0007050 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000035 ! Larval:Protruding-mouth -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000035 ! larval:protruding-mouth +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007051 @@ -33002,8 +33193,8 @@ synonym: "ventral interhyoidei" EXACT PLURAL [] synonym: "ventral interhyoideus" EXACT [] xref: TAO:0007051 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007052 @@ -33013,8 +33204,8 @@ def: "Is a ventral,paired hyoid muscle that inserts at the most anterior basibra synonym: "hyohyal" EXACT [] xref: TAO:0007052 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007053 @@ -33025,8 +33216,8 @@ synonym: "dorsal adductor hyomandibulae" EXACT [] synonym: "dorsal adductors hyomandibulae" EXACT PLURAL [] xref: TAO:0007053 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007054 @@ -33041,9 +33232,9 @@ xref: TAO:0007054 is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0000232 ! otic vesicle lateral protrusion relationship: develops_from ZFA:0000469 ! otic vesicle anterior protrusion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0007055 @@ -33057,9 +33248,9 @@ synonym: "ventral piller of the semicircular canal" EXACT [] xref: TAO:0007055 is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0001716 ! otic vesicle ventral protrusion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0007056 @@ -33073,9 +33264,9 @@ synonym: "posterior pillar of the semicircular" EXACT [] is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0000232 ! otic vesicle lateral protrusion relationship: develops_from ZFA:0000412 ! otic vesicle posterior protrusion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0007057 @@ -33087,8 +33278,8 @@ synonym: "ocular vasculature" RELATED [] synonym: "optic vasculature" EXACT [] xref: TAO:0007057 is_a: ZFA:0005297 ! cranial blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0007058 @@ -33097,9 +33288,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the dorsal-most aspect of the developing neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0007058 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007059 @@ -33110,8 +33301,8 @@ synonym: "neurogenic fields" EXACT PLURAL [] xref: TAO:0007059 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007013 ! preplacodal ectoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007060 @@ -33121,8 +33312,8 @@ def: "Neurogenic field fated to develop into a dorsolateral placode." [GOC:ymb, synonym: "dorsolateral fields" EXACT PLURAL [] xref: TAO:0007060 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007061 @@ -33132,8 +33323,8 @@ def: "Neurogenic field fated to develop into an epibranchial placode." [GOC:ymb, synonym: "epibranchial fields" EXACT PLURAL [] xref: TAO:0007061 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007062 @@ -33143,8 +33334,8 @@ def: "Neurogenic field fated to develop into the olfactory placode." [GOC:ymb, O synonym: "olfactory fields" EXACT PLURAL [] xref: TAO:0007062 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000025 ! Segmentation:10-13 somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000025 ! segmentation:10-13 somites +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007063 @@ -33154,8 +33345,8 @@ def: "Cranial neural crest that is part of the hindbrain." [GOC:ymb, ORCiD:0000- synonym: "rhombencephalic neural crest" EXACT [] xref: TAO:0007063 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:51:35Z @@ -33166,9 +33357,9 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the mandibular arch." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-061108-6] xref: TAO:0007064 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:53:53Z @@ -33179,9 +33370,9 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the hyoid arch." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-061108-6] xref: TAO:0007065 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:56:12Z @@ -33192,8 +33383,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the glossopharyngeal ganglion." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0007066 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-11-04T03:39:42Z @@ -33204,8 +33395,8 @@ namespace: zebrafish_anatomy synonym: "gX" EXACT [] xref: TAO:0007067 is_a: ZFA:0001555 ! epibranchial ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2010-04-21T09:45:38Z @@ -33215,8 +33406,8 @@ name: otic epithelium namespace: zebrafish_anatomy def: "Is an epithelium of the auditory apparatus." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2011-04-26T12:34:16Z @@ -33226,8 +33417,8 @@ name: otic squamous epithelium namespace: zebrafish_anatomy def: "Is an otic epithelium composed of cells with a squamous morphology." [GOC:ymb, ISBN:019514502X, ORCiD:0000-0002-9900-7880] is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2011-04-26T12:38:05Z @@ -33237,8 +33428,8 @@ name: otic sensory epithelium namespace: zebrafish_anatomy def: "Is an otic epithelium that is a neuroepithelium which is pseudostratified and senses sound." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2011-04-26T12:43:35Z @@ -33248,9 +33439,9 @@ name: flexural organ namespace: zebrafish_anatomy def: "Is a portion of tissue that is the most anterior portion of the notochord. The flexural organ secretes Reissner's fiber-related proteins, including F-spondin." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-120709-5] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2012-07-18T02:12:26Z @@ -33260,9 +33451,9 @@ name: blood sinus namespace: zebrafish_anatomy def: "Is a multitissue structure that accumulates blood." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2014-10-24T02:12:44Z @@ -33273,9 +33464,9 @@ namespace: zebrafish_anatomy def: "An enlarged chamber in the blood sinus capable of accumulating a large volume of blood." [GOC:ymb, ORCiD:0000-0002-9900-7880] synonym: "blood sinus lumen" EXACT [] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007072 ! blood sinus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2014-10-24T02:14:28Z @@ -33285,9 +33476,9 @@ name: maxillary barbel blood sinus namespace: zebrafish_anatomy def: "Is a three-chambered blood sinus found at the base of the maxillary barbel. Responsible, in part, for the movement of the maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140816-6] is_a: ZFA:0007072 ! blood sinus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:18:03Z @@ -33297,9 +33488,9 @@ name: distal bulb of the maxillary blood sinus namespace: zebrafish_anatomy def: "Is a multi-tissue structure forming the smallest chamber of the maxillary barbel blood sinus. It projects into the barbel shaft and has a blood filled lumen, into which extend irregular septa of vascular smooth muscle cells. Additional smooth muscle cells surround the lumen and attach the bulb to the barbel core. Circumferential to the core, there is a thin band of dermal tissue through with run several smaller capillaries and the barbel branch of the of the facial nerve (cranial nerve VII). The entire structure is wrapped by a glandular, stratified epithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:22:04Z @@ -33309,9 +33500,9 @@ name: central chamber of the maxillary blood sinus namespace: zebrafish_anatomy def: "Is a multi-tissue structure that is located outside the maxillary barbel proper and is positioned on the lateral surface of the maxilla, medially attached to the lateral surface of the maxillary bone and is laterally is attached to a hemispheric capsule of dense connective tissue of the distal bulb. It connects with the smaller accessory chamber through a slight isthmus. It has a smooth muscle tunic from which extend luminally projecting muscular septa." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:27:58Z @@ -33321,9 +33512,9 @@ name: accessory chamber of the maxillary blood sinus namespace: zebrafish_anatomy def: "Is a multi-tissue structure part of the maxillary barbel blood sinus which is connected to the central chamber of the maxillary blood sinus by a slight isthmus. It is not muscularized, has no dense connective tissue capsule and is not attached to adjacent bone. Is composed of dark tunica intima wrapped by thick, light tunica adventitia; cells within the adventitia are widely separated, with extended cytoplasmic veils. External to the adventitia, a branch of the facial nerve and several smaller nerve bundles appear in cross section just lateral to the isthmus. These nerves are in the dermis, but outside the sinus." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:34:40Z @@ -33334,9 +33525,9 @@ namespace: zebrafish_anatomy def: "A blind end lymph vessel that emerges from the maxilla, wraps around the sinus isthmus, then runs alongside the distal bulb to enter the barbel shaft proper." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1, ZFIN:ZDB-PUB-140816-6] synonym: "dorsal maxillary barbel lymph vessel" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:41:22Z @@ -33347,9 +33538,9 @@ namespace: zebrafish_anatomy def: "Blood vessel that emerges from the maxilla, wraps around the sinus isthmus, then runs alongside the distal bulb to enter the barbel shaft proper. There are two ventral vessels that connect distally in the maxillary barbel forming a complete capillary loop." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1, ZFIN:ZDB-PUB-140816-6] synonym: "ventral maxillary barbel blood vessel" EXACT [] is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:46:19Z @@ -33359,9 +33550,9 @@ name: maxillary barbel vasculature namespace: zebrafish_anatomy def: "Is a vasculature that delivers fluid to the maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1] is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:52:05Z @@ -33371,9 +33562,9 @@ name: maxillary barbel proximal plexus namespace: zebrafish_anatomy def: "Is a vascular plexus at the base, or proximal end, of the developing maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1, ZFIN:ZDB-PUB-140816-6] is_a: ZFA:0007080 ! maxillary barbel vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:55:07Z @@ -33383,9 +33574,9 @@ name: neural plate border namespace: zebrafish_anatomy def: "Region of the neural plate that will give rise to the neural crest. The neural plate border includes progenitors for the dorsal neural tube, the neural crest, and placodes. It is a broad competence domain, established between neural and non-neural ectoderm within which subtle and sequential cell autonomous and non-cell autonomous molecular interactions will progressively define the neural crest fate from adjacent dorsal neural fates." [GOC:ymb, ORCiD:0000-0002-9900-7880, PMID:22305800] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly created_by: yvonne creation_date: 2016-01-28T08:43:28Z @@ -33396,8 +33587,8 @@ namespace: zebrafish_anatomy def: "Premigratory neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000045 ! neural crest relationship: develops_from ZFA:0007082 ! neural plate border -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: yvonne creation_date: 2016-01-28T09:06:50Z @@ -33406,12 +33597,13 @@ id: ZFA:0007084 name: premigratory neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory neural crest cells" EXACT PLURAL [] xref: CL:0007004 is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0007083 ! premigratory neural crest -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: yvonne creation_date: 2016-01-28T09:29:06Z @@ -33422,8 +33614,8 @@ namespace: zebrafish_anatomy def: "Migratory neural crest population that develops from premigratory neural crest. This group of neural crest has undergone ectomesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000045 ! neural crest relationship: develops_from ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-01-28T12:04:14Z @@ -33432,13 +33624,14 @@ id: ZFA:0007086 name: migratory neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory neural crest population. Migratory neural crest cells develop from premigratory neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory neural crest cells" EXACT PLURAL [] xref: CL:0000333 is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0007084 ! premigratory neural crest cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0007085 ! migratory neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-01-28T01:35:09Z @@ -33450,8 +33643,8 @@ def: "Migratory cranial neural crest population that develops from premigratory is_a: ZFA:0001194 ! cranial neural crest is_a: ZFA:0007085 ! migratory neural crest relationship: develops_from ZFA:0007088 ! premigratory cranial neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-03-07T11:45:15Z @@ -33462,8 +33655,8 @@ namespace: zebrafish_anatomy def: "Premigratory cranial neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001194 ! cranial neural crest is_a: ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-07T03:27:33Z @@ -33472,10 +33665,11 @@ id: ZFA:0007089 name: embryonic cell namespace: zebrafish_anatomy def: "A cell of the embryo." [CL:curator] +subset: cell_slim xref: CL:0002321 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000001 ! zygote:1-cell created_by: yvonne creation_date: 2016-03-30T01:24:36Z @@ -33484,12 +33678,13 @@ id: ZFA:0007090 name: premigratory cranial neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory cranial neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory cranial neural crest cells" EXACT PLURAL [] is_a: ZFA:0007084 ! premigratory neural crest cell is_a: ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007088 ! premigratory cranial neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T12:37:58Z @@ -33498,13 +33693,14 @@ id: ZFA:0007091 name: migratory cranial neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory cranial neural crest population. Migratory cranial neural crest cells develop from premigratory cranial neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory cranial neural crest cells" EXACT PLURAL [] xref: CL:0000008 is_a: ZFA:0007086 ! migratory neural crest cell relationship: develops_from ZFA:0007090 ! premigratory cranial neural crest cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007087 ! migratory cranial neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-03-31T12:43:55Z @@ -33515,8 +33711,8 @@ namespace: zebrafish_anatomy def: "Premigratory trunk neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001024 ! trunk neural crest is_a: ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000030 ! pharyngula:prim-15 +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:03:25Z @@ -33528,8 +33724,8 @@ def: "Migratory trunk neural crest population that develops from premigratory tr is_a: ZFA:0001024 ! trunk neural crest is_a: ZFA:0007085 ! migratory neural crest relationship: develops_from ZFA:0007092 ! premigratory trunk neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:11:09Z @@ -33538,12 +33734,13 @@ id: ZFA:0007094 name: premigratory trunk neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory trunk neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory trunk neural crest cells" EXACT PLURAL [] is_a: ZFA:0007084 ! premigratory neural crest cell is_a: ZFA:0009004 ! trunk neural crest cell -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0007092 ! premigratory trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:18:04Z @@ -33552,13 +33749,14 @@ id: ZFA:0007095 name: migratory trunk neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory trunk neural crest population. Migratory trunk neural crest cells develop from premigratory trunk neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory trunk neural crest cells" EXACT PLURAL [] xref: CL:0000011 is_a: ZFA:0007086 ! migratory neural crest cell relationship: develops_from ZFA:0007094 ! premigratory trunk neural crest cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0007093 ! migratory trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:22:09Z @@ -33568,8 +33766,8 @@ name: vertebra 13 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 12." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T14:15:01Z @@ -33579,8 +33777,8 @@ name: vertebra 14 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 13." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T14:22:33Z @@ -33590,8 +33788,8 @@ name: vertebra 15 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 14." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:10:35Z @@ -33601,8 +33799,8 @@ name: vertebra 16 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 15." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:15:45Z @@ -33612,8 +33810,8 @@ name: vertebra 17 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 16." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:17:20Z @@ -33623,8 +33821,8 @@ name: vertebra 18 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 17." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:19:07Z @@ -33634,8 +33832,8 @@ name: vertebra 19 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 18." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:20:46Z @@ -33645,8 +33843,8 @@ name: vertebra 20 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 19." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:22:42Z @@ -33656,8 +33854,8 @@ name: vertebra 21 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 20." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:24:43Z @@ -33667,8 +33865,8 @@ name: vertebra 22 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 21." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:26:15Z @@ -33678,8 +33876,8 @@ name: vertebra 23 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 22." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:29:09Z @@ -33689,8 +33887,8 @@ name: vertebra 24 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 23." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:31:04Z @@ -33700,8 +33898,8 @@ name: vertebra 25 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 24." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:32:40Z @@ -33711,8 +33909,8 @@ name: vertebra 26 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 25." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:34:15Z @@ -33722,8 +33920,8 @@ name: vertebra 27 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 26." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:36:10Z @@ -33733,8 +33931,8 @@ name: vertebra 28 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 27." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:37:40Z @@ -33744,8 +33942,8 @@ name: vertebra 29 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 28." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:39:17Z @@ -33755,8 +33953,8 @@ name: vertebra 30 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 29." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:41:01Z @@ -33766,8 +33964,8 @@ name: anatomical conduit namespace: zebrafish_anatomy def: "An anatomical structure that is an opening or tube that connects two distinct anatomical spaces." [GOC:ymb, ORCid:0000-0002-9900-7880] is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2018-03-23T11:46:06Z @@ -33777,8 +33975,8 @@ name: pericardial region namespace: zebrafish_anatomy def: "An anatomical cluster composed of the heart and associated structures." [GOC:ymb, ORCid:0000-0002-9900-7880] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2018-03-26T11:52:32Z @@ -33788,8 +33986,8 @@ name: pleuroperitoneal region namespace: zebrafish_anatomy def: "An anatomical cluster composed of the organs of the pleuroperitoneal cavity and associated structures." [GOC:ymb, ORCid:0000-0002-9900-7880] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2018-03-26T14:19:43Z @@ -33800,8 +33998,8 @@ namespace: zebrafish_anatomy def: "Joint between Meckel's cartilage and palatoquadrate cartilage." [GOC:ymb, ORCid:0000-0002-9900-7880, ZFIN:ZDB-PUB-151122-6] synonym: "jaw joint" EXACT [] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Yvonne creation_date: 2019-04-05T15:06:57Z @@ -33812,9 +34010,9 @@ namespace: zebrafish_anatomy def: "The vertebral body end plate is part of the autocentrum. The anterior and posterior surfaces of the autocentrum constitute the funnel shaped vertebral body end plates. The outer rim of the end plate is the vertebral body growth zone. The anterior and posterior end plates are connected by bony plates that are horizontally attached to the ourter contour of the autocentrum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-180228-2] synonym: "vertebral body endplate" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000126 ! centrum -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Yvonne creation_date: 2019-04-08T12:21:06Z @@ -33825,9 +34023,9 @@ namespace: zebrafish_anatomy def: "Ligament that connects adjacent vertebra. The intervertebral ligament (IVL) connects the posterior vertebral end plate to the anterior vertebral end plate of adjacent vertebra. For example the IVL connects the posterior end plate of vertebra 14 to the anterior end plate of vertebra 15. It is typically composed of three distinct layers: the notochord sheet which is mainly type II collagen; the outer elastin layer; and a layer of type I collagen fiber bundles." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-180808-7] synonym: "IVL" EXACT [] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Yvonne creation_date: 2019-04-08T13:27:22Z @@ -33836,13 +34034,14 @@ id: ZFA:0007120 name: cerebrospinal fluid contacting neuron namespace: zebrafish_anatomy def: "Spinal cord interneuron located along the central canal that extends a microvilliated apical process into the cerebrospinal fluid and extends ascending axonal projections ventrally and ipsilaterally. CSF-cNs are GABAergic neurons that express PKD2L1 (TRPP3) channels and have been shown to be chemosensory and mechanosensory, responding to pH and osmolarity changes as well as mechanical stimuli associated with tail bending. CSF-cNs originate from two distinct progenitor domains, p3 and pMN. CSF-cNs project onto caudal primary (CaP motor neurons) and commissural primary ascending (CoPA) sensory interneurons within the escape circuit as well as onto V0-v interneurons within the slow swimming circuit." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-170409-2] +subset: cell_slim synonym: "CSF-cN" EXACT [ZFIN:ZDB-PUB-170409-2] synonym: "CSF-cNs" EXACT PLURAL [ZFIN:ZDB-PUB-170409-2] is_a: ZFA:0000778 ! spinal cord interneuron is_a: ZFA:0009120 ! mechanoreceptor cell is_a: ZFA:0009124 ! chemoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Yvonne creation_date: 2020-03-03T10:15:16Z @@ -33851,12 +34050,13 @@ id: ZFA:0007121 name: ventral cerebrospinal fluid contacting neuron namespace: zebrafish_anatomy def: "A cerebrospinal fluid contacting neuron that originates form p3 progenitor domain. The apical extension of ventral CSF-cNs are more compact than that of dorsal CSF-cNs. Ventral CSF-cNs synapse with CaP motor neurons and project onto CoPA sensory interneurons. Ventral CSF-cNs respond to longitudinal contractions of the spinal cord. Frequently called KA\" neurons." [GOC:ymb, ORDiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-170409-2] +subset: cell_slim synonym: "KA 2" RELATED [] synonym: "ventral CSF-cN" EXACT [ZFIN:ZDB-PUB-170409-2] synonym: "ventral CSF-cNs" EXACT PLURAL [ZFIN:ZDB-PUB-170409-2] is_a: ZFA:0007120 ! cerebrospinal fluid contacting neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Yvonne creation_date: 2020-03-03T10:51:35Z @@ -33865,11 +34065,12 @@ id: ZFA:0007122 name: epidermal stem cell namespace: zebrafish_anatomy def: "A stem cell that gives rise to several epidermal cell types, including ionocytes and keratinocytes." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "" RELATED [] xref: CL:1000428 is_a: ZFA:0009020 ! multi fate stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T13:31:57Z @@ -33878,11 +34079,12 @@ id: ZFA:0007123 name: ionocyte progenitor cell namespace: zebrafish_anatomy def: "A cell that will become an ionocyte. Ionocyte progenitor cells develop from epidermal stem cells in the ventral ectoderm that are DeltaC and Tp63 positive." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-190402-19] +subset: cell_slim synonym: "ionocyte progenitor cells" EXACT PLURAL [] is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0007122 ! epidermal stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T14:01:21Z @@ -33891,11 +34093,12 @@ id: ZFA:0007124 name: keratinocyte progenitor cell namespace: zebrafish_anatomy def: "A cell that will become a keratinocyte. Keratinocyte progenitor cells develop from epidermal stem cells in the ventral ectoderm that are DeltaC negative and Tp63 positive." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-190402-19] +subset: cell_slim synonym: "keratinocyte progenitor cells" EXACT PLURAL [] is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0007122 ! epidermal stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T14:12:30Z @@ -33906,9 +34109,9 @@ namespace: zebrafish_anatomy def: "A portion of tissue that is the deepest point of the fold of the midbrain hindbrain boundary. In zebrafish the midbrain hindbrain boundary constriction (MHBC) is formed soon after neural tube closure. The MHBC is formed by the bending of the basal side of the neuroepithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-080825-24] synonym: "MHBC" EXACT [ZFIN:ZDB-PUB-080825-24] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Yvonne creation_date: 2020-03-04T12:35:25Z @@ -33923,9 +34126,9 @@ xref: CARO:0000013 xref: CL:0000000 xref: TAO:0009000 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0009001 @@ -33936,8 +34139,8 @@ synonym: "receptor cells (sensu Animalia)" EXACT PLURAL [] xref: CL:0000006 xref: TAO:0009001 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009002 @@ -33949,8 +34152,8 @@ synonym: "early embryonic cells" EXACT PLURAL [] xref: CL:0000007 xref: TAO:0009002 is_a: ZFA:0007089 ! embryonic cell -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0009003 @@ -33960,9 +34163,9 @@ def: "A cell of the cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] subset: cell_slim synonym: "cranial neural crest cells" EXACT PLURAL [] is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001194 ! cranial neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009004 @@ -33972,9 +34175,9 @@ def: "A cell of the trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] subset: cell_slim synonym: "trunk neural crest cells" EXACT PLURAL [] is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0001024 ! trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009005 @@ -33987,9 +34190,9 @@ xref: CL:0000017 xref: TAO:0009005 is_a: ZFA:0009016 ! germ line cell relationship: develops_from ZFA:0009007 ! spermatogonium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0009006 @@ -34003,8 +34206,8 @@ synonym: "spermatozoon" EXACT [] xref: CL:0000019 xref: TAO:0009006 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009007 @@ -34018,9 +34221,9 @@ xref: CL:0000020 xref: TAO:0001337 xref: TAO:0009007 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005882 ! spermatogenic cyst -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009009 @@ -34031,8 +34234,8 @@ xref: CL:0000029 xref: TAO:0009009 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009010 @@ -34045,8 +34248,8 @@ xref: TAO:0009010 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009011 @@ -34057,8 +34260,8 @@ synonym: "neuroblasts" EXACT PLURAL [] xref: CL:0000031 xref: TAO:0009011 is_a: ZFA:0009019 ! neuronal stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009012 @@ -34069,8 +34272,8 @@ synonym: "neuroplacodal cells" EXACT PLURAL [] xref: CL:0000032 xref: TAO:0009012 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009013 @@ -34081,8 +34284,8 @@ synonym: "single fate stem cells" EXACT PLURAL [] xref: CL:0000035 xref: TAO:0009013 is_a: ZFA:0009307 ! somatic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009014 @@ -34099,9 +34302,9 @@ xref: CL:0000037 xref: TAO:0009014 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009258 ! angioblastic mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009015 @@ -34119,8 +34322,8 @@ xref: CL:0000038 xref: TAO:0009015 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009016 @@ -34132,8 +34335,8 @@ synonym: "germ line cells" EXACT PLURAL [] xref: CL:0000039 xref: TAO:0009016 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009017 @@ -34148,8 +34351,8 @@ xref: CL:0000040 xref: TAO:0009017 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009018 @@ -34162,8 +34365,8 @@ xref: CL:0000042 xref: TAO:0009018 is_a: ZFA:0009353 ! myeloblast relationship: develops_from ZFA:0009352 ! neutrophil progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009019 @@ -34175,8 +34378,8 @@ xref: CL:0000047 xref: TAO:0009019 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009020 @@ -34188,8 +34391,8 @@ synonym: "multipotent stem cell" EXACT [] xref: CL:0000048 xref: TAO:0009020 is_a: ZFA:0009307 ! somatic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009021 @@ -34206,8 +34409,8 @@ xref: CL:0000049 xref: TAO:0009021 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009022 @@ -34221,8 +34424,8 @@ xref: CL:0000050 xref: TAO:0009022 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009023 @@ -34240,8 +34443,8 @@ xref: CL:0000051 xref: TAO:0009023 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009024 @@ -34253,8 +34456,8 @@ synonym: "totipotent stem cells" EXACT PLURAL [] xref: CL:0000052 xref: TAO:0009024 is_a: ZFA:0009307 ! somatic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009025 @@ -34267,8 +34470,8 @@ xref: CL:0000056 xref: TAO:0009025 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009179 ! muscle stem cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009026 @@ -34282,8 +34485,8 @@ xref: CL:0000057 xref: TAO:0009026 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009027 @@ -34298,9 +34501,9 @@ is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001501 ! cartilage element -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009028 @@ -34313,8 +34516,8 @@ xref: CL:0000059 xref: TAO:0009028 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009029 @@ -34327,9 +34530,9 @@ xref: CL:0000060 xref: TAO:0009029 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005141 ! tooth pulp -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009030 @@ -34341,9 +34544,9 @@ synonym: "cementoblasts" EXACT PLURAL [] xref: CL:0000061 xref: TAO:0009030 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009031 @@ -34357,8 +34560,8 @@ xref: TAO:0009031 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: develops_from ZFA:0009184 ! osteoprogenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009032 @@ -34369,8 +34572,8 @@ synonym: "ciliated cells" EXACT PLURAL [] xref: CL:0000064 xref: TAO:0009032 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009033 @@ -34383,9 +34586,9 @@ xref: CL:0000065 xref: TAO:0009033 is_a: ZFA:0009035 ! ciliated epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009034 @@ -34397,9 +34600,9 @@ synonym: "epithelial cells" EXACT PLURAL [] xref: CL:0000066 xref: TAO:0009034 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001486 ! epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009035 @@ -34411,8 +34614,8 @@ xref: CL:0000067 xref: TAO:0009035 is_a: ZFA:0009032 ! ciliated cell is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009036 @@ -34426,9 +34629,9 @@ is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0005773 ! embryonic blood vessel endothelial progenitor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005257 ! blood vessel endothelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009037 @@ -34439,8 +34642,8 @@ synonym: "barrier epithelial cells" EXACT PLURAL [] xref: CL:0000073 xref: TAO:0009037 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009038 @@ -34451,8 +34654,8 @@ synonym: "columnar/cuboidal epithelial cells" EXACT PLURAL [] xref: CL:0000075 xref: TAO:0009038 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009039 @@ -34463,8 +34666,8 @@ synonym: "squamous epithelial cells" EXACT PLURAL [] xref: CL:0000076 xref: TAO:0009039 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009040 @@ -34477,8 +34680,8 @@ xref: TAO:0009040 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009130 ! lining cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009041 @@ -34489,8 +34692,8 @@ synonym: "peridermal cells" EXACT PLURAL [] xref: CL:0000078 xref: TAO:0009041 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009042 @@ -34502,8 +34705,8 @@ xref: CL:0000079 xref: TAO:0009042 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009180 ! stratified epithelial stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009043 @@ -34515,8 +34718,8 @@ synonym: "circulating cells" EXACT PLURAL [] xref: CL:0000080 xref: TAO:0009043 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009044 @@ -34528,9 +34731,9 @@ synonym: "blood cells" EXACT PLURAL [] xref: CL:0000081 xref: TAO:0009044 is_a: ZFA:0005830 ! hematopoietic cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000007 ! blood -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009045 @@ -34542,8 +34745,8 @@ xref: CL:0000083 xref: TAO:0009045 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009139 ! endodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009046 @@ -34571,8 +34774,8 @@ xref: TAO:0009340 xref: TAO:0009341 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009350 ! pro-T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009047 @@ -34586,8 +34789,8 @@ xref: CL:0000092 xref: TAO:0009047 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009265 ! monocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009048 @@ -34599,8 +34802,8 @@ synonym: "granulocytes" EXACT PLURAL [] xref: CL:0000094 xref: TAO:0009048 is_a: ZFA:0009326 ! myeloid leukocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009049 @@ -34625,8 +34828,8 @@ xref: TAO:0009049 is_a: ZFA:0009327 ! neutrophil relationship: develops_from ZFA:0009254 ! band form neutrophil relationship: develops_from ZFA:0009328 ! immature neutrophil -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009050 @@ -34638,8 +34841,8 @@ xref: CL:0000098 xref: TAO:0009050 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009051 @@ -34651,8 +34854,8 @@ synonym: "interneurons" EXACT PLURAL [] xref: CL:0000099 xref: TAO:0009051 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009052 @@ -34664,8 +34867,8 @@ synonym: "motoneuron" EXACT [] xref: CL:0000100 xref: TAO:0009052 is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009053 @@ -34676,8 +34879,8 @@ subset: cell_slim xref: CL:0000101 xref: TAO:0009053 is_a: ZFA:0009238 ! afferent neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009054 @@ -34688,8 +34891,8 @@ synonym: "polymodal neurons" EXACT PLURAL [] xref: CL:0000102 xref: TAO:0009054 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009055 @@ -34701,9 +34904,9 @@ synonym: "bipolar neurons" EXACT PLURAL [] xref: CL:0000103 xref: TAO:0009055 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009056 @@ -34714,8 +34917,8 @@ synonym: "multipolar neurons" EXACT PLURAL [] xref: CL:0000104 xref: TAO:0009056 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009057 @@ -34726,8 +34929,8 @@ synonym: "pseudounipolar neurons" EXACT PLURAL [] xref: CL:0000105 xref: TAO:0009057 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009058 @@ -34738,8 +34941,8 @@ synonym: "unipolar neurons" EXACT PLURAL [] xref: CL:0000106 xref: TAO:0009058 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009059 @@ -34751,9 +34954,9 @@ xref: CL:0000107 xref: TAO:0009059 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001574 ! autonomic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009060 @@ -34765,8 +34968,8 @@ synonym: "cholinergic neurons" EXACT PLURAL [] xref: CL:0000108 xref: TAO:0009060 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009061 @@ -34777,8 +34980,8 @@ synonym: "adrenergic neurons" EXACT PLURAL [] xref: CL:0000109 xref: TAO:0009061 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009062 @@ -34789,8 +34992,8 @@ synonym: "peptidergic neurons" EXACT PLURAL [] xref: CL:0000110 xref: TAO:0009062 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009063 @@ -34802,8 +35005,8 @@ xref: CL:0000111 xref: TAO:0009063 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009064 @@ -34815,8 +35018,8 @@ synonym: "mononuclear phagocytes" EXACT PLURAL [] xref: CL:0000113 xref: TAO:0009064 is_a: ZFA:0009357 ! mononuclear cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009065 @@ -34827,8 +35030,8 @@ synonym: "endothelial cells" EXACT PLURAL [] xref: CL:0000115 xref: TAO:0009065 is_a: ZFA:0009130 ! lining cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009066 @@ -34840,9 +35043,9 @@ subset: cell_slim xref: CL:0000116 xref: TAO:0009066 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000048 ! olfactory placode -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009067 @@ -34854,8 +35057,8 @@ xref: CL:0000117 xref: TAO:0009067 is_a: ZFA:0009248 ! neuron relationship: develops_from ZFA:0009168 ! neuroblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009068 @@ -34866,8 +35069,8 @@ synonym: "basket cells" EXACT PLURAL [] xref: CL:0000118 xref: TAO:0009068 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009069 @@ -34878,8 +35081,8 @@ synonym: "Golgi cells" EXACT PLURAL [] xref: CL:0000119 xref: TAO:0009069 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009070 @@ -34890,9 +35093,9 @@ synonym: "granule cells" EXACT PLURAL [] xref: CL:0000120 xref: TAO:0009070 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009071 @@ -34905,10 +35108,10 @@ xref: CL:0000121 xref: TAO:0009071 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001706 ! Purkinje cell layer corpus cerebelli relationship: part_of ZFA:0001709 ! Purkinje cell layer valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009072 @@ -34919,8 +35122,8 @@ synonym: "stellate cells" EXACT PLURAL [] xref: CL:0000122 xref: TAO:0009072 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009073 @@ -34934,9 +35137,9 @@ xref: CL:0000125 xref: TAO:0009073 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009010 ! glioblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009074 @@ -34948,8 +35151,8 @@ xref: CL:0000126 xref: TAO:0009074 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009075 @@ -34961,8 +35164,8 @@ synonym: "astrocytes" EXACT PLURAL [] xref: CL:0000127 xref: TAO:0009075 is_a: ZFA:0009074 ! macroglial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009076 @@ -34975,8 +35178,8 @@ xref: CL:0000128 xref: TAO:0009076 is_a: ZFA:0009074 ! macroglial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009077 @@ -34988,8 +35191,8 @@ synonym: "microglia" EXACT [] xref: CL:0000129 xref: TAO:0009077 is_a: ZFA:0009141 ! macrophage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009078 @@ -35002,9 +35205,9 @@ xref: TAO:0009078 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009139 ! endodermal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009079 @@ -35018,9 +35221,9 @@ xref: TAO:0009079 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001687 ! corneal endothelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009080 @@ -35032,8 +35235,8 @@ xref: CL:0000133 xref: TAO:0009080 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009137 ! ectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009081 @@ -35046,8 +35249,8 @@ xref: CL:0000134 xref: TAO:0009081 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009082 @@ -35065,9 +35268,9 @@ xref: TAO:0009082 xref: TAO:0009208 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005345 ! adipose tissue -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0009083 @@ -35080,9 +35283,9 @@ xref: CL:0000137 xref: TAO:0009083 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009031 ! osteoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009084 @@ -35096,9 +35299,9 @@ xref: TAO:0009084 is_a: ZFA:0009093 ! GAG secreting cell is_a: ZFA:0009287 ! collagen secreting cell relationship: develops_from ZFA:0009027 ! chondroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001501 ! cartilage element -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009085 @@ -35111,8 +35314,8 @@ xref: CL:0000059 xref: TAO:0009085 is_a: ZFA:0009089 ! simple columnar epithelial cell relationship: develops_from ZFA:0009028 ! ameloblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009086 @@ -35125,8 +35328,8 @@ xref: TAO:0009086 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009029 ! odontoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009087 @@ -35140,9 +35343,9 @@ xref: TAO:0009087 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009030 ! cementoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009088 @@ -35155,8 +35358,8 @@ synonym: "APC" EXACT [] xref: CL:0000145 xref: TAO:0009088 is_a: ZFA:0009309 ! leukocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009089 @@ -35167,8 +35370,8 @@ synonym: "simple columnar epithelial cells" EXACT PLURAL [] xref: CL:0000146 xref: TAO:0009089 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009090 @@ -35181,8 +35384,8 @@ synonym: "chromatophore" EXACT [] xref: CL:0000147 xref: TAO:0009090 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009091 @@ -35196,10 +35399,10 @@ xref: CL:0000148 xref: TAO:0009091 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0009249 ! melanoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0005915 ! iris melanophore layer -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009092 @@ -35211,8 +35414,8 @@ synonym: "exocrine cells" EXACT PLURAL [] xref: CL:0000152 xref: TAO:0009092 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009093 @@ -35223,8 +35426,8 @@ synonym: "hyaluronic acid secreting cell" EXACT [] xref: CL:0000153 xref: TAO:0009093 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009094 @@ -35236,9 +35439,9 @@ synonym: "chalice cell" EXACT [] xref: CL:0000160 xref: TAO:0009094 is_a: ZFA:0009159 ! mucus secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001486 ! epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009095 @@ -35249,8 +35452,8 @@ synonym: "acid secreting cells" EXACT PLURAL [] xref: CL:0000161 xref: TAO:0009095 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009096 @@ -35262,9 +35465,9 @@ synonym: "endocrine cells" EXACT PLURAL [] xref: CL:0000163 xref: TAO:0009096 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009097 @@ -35276,8 +35479,8 @@ synonym: "enteroendocrine cells" EXACT PLURAL [] xref: CL:0000164 xref: TAO:0009097 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009098 @@ -35290,8 +35493,8 @@ xref: CL:0000165 xref: TAO:0009098 is_a: ZFA:0009096 ! endocrine cell is_a: ZFA:0009190 ! electrically responsive cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009099 @@ -35304,8 +35507,8 @@ xref: CL:0000166 xref: TAO:0009099 is_a: ZFA:0009098 ! neuroendocrine cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009100 @@ -35316,8 +35519,8 @@ synonym: "peptide hormone secreting cells" EXACT PLURAL [] xref: CL:0000167 xref: TAO:0009100 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009101 @@ -35328,8 +35531,8 @@ synonym: "insulin secreting cells" EXACT PLURAL [] xref: CL:0000168 xref: TAO:0009101 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009102 @@ -35340,9 +35543,9 @@ synonym: "beta cell" EXACT [] xref: CL:0000169 xref: TAO:0009102 is_a: ZFA:0009101 ! insulin secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009103 @@ -35353,8 +35556,8 @@ synonym: "glucagon secreting cells" EXACT PLURAL [] xref: CL:0000170 xref: TAO:0009103 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009104 @@ -35365,9 +35568,9 @@ synonym: "alpha cell" EXACT [] xref: CL:0000171 xref: TAO:0009104 is_a: ZFA:0009103 ! glucagon secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009105 @@ -35378,8 +35581,8 @@ synonym: "somatostatin secreting cells" EXACT PLURAL [] xref: CL:0000172 xref: TAO:0009105 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009106 @@ -35390,8 +35593,8 @@ synonym: "steroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000174 xref: TAO:0009106 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009107 @@ -35402,8 +35605,8 @@ synonym: "testosterone secreting cells" EXACT PLURAL [] xref: CL:0000177 xref: TAO:0009107 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009108 @@ -35415,8 +35618,8 @@ synonym: "interstitial cell" EXACT [] xref: CL:0000178 xref: TAO:0009108 is_a: ZFA:0009107 ! testosterone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009109 @@ -35427,8 +35630,8 @@ synonym: "progesterone secreting cells" EXACT PLURAL [] xref: CL:0000179 xref: TAO:0009109 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009110 @@ -35439,8 +35642,8 @@ synonym: "estradiol secreting cells" EXACT PLURAL [] xref: CL:0000180 xref: TAO:0009110 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009111 @@ -35453,9 +35656,9 @@ xref: CL:0000182 xref: TAO:0009111 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009398 ! hepatoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009112 @@ -35469,8 +35672,8 @@ synonym: "perivascular cells" EXACT [] xref: CL:0000669 xref: TAO:0009112 is_a: ZFA:0005944 ! mural cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009113 @@ -35482,8 +35685,8 @@ xref: CL:0000185 xref: TAO:0009113 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009114 @@ -35497,9 +35700,9 @@ xref: CL:0000187 xref: TAO:0009114 is_a: ZFA:0009190 ! electrically responsive cell relationship: develops_from ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005145 ! muscle -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009115 @@ -35512,9 +35715,9 @@ xref: CL:0000188 xref: TAO:0009115 is_a: ZFA:0005784 ! striated muscle cell relationship: develops_from ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005277 ! skeletal muscle -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009116 @@ -35530,8 +35733,8 @@ xref: TAO:0009116 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0001373 ! migratory slow muscle precursor cell relationship: develops_from ZFA:0009368 ! slow muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009117 @@ -35546,8 +35749,8 @@ xref: CL:0000190 xref: TAO:0009117 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0009369 ! fast muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0009118 @@ -35559,9 +35762,9 @@ synonym: "non-striated muscle cell" EXACT [] xref: CL:0000192 xref: TAO:0009118 is_a: ZFA:0009114 ! muscle cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005274 ! smooth muscle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009119 @@ -35574,8 +35777,8 @@ synonym: "nocireceptor" EXACT [] xref: CL:0000198 xref: TAO:0009119 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009120 @@ -35587,8 +35790,8 @@ synonym: "mechanoreceptor cells" EXACT PLURAL [] xref: CL:0000199 xref: TAO:0009120 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009121 @@ -35602,8 +35805,8 @@ synonym: "auditory receptor cells" EXACT PLURAL [] xref: CL:0000202 xref: TAO:0009121 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009122 @@ -35622,8 +35825,8 @@ synonym: "thermoreceptor cells" EXACT PLURAL [] xref: CL:0000205 xref: TAO:0009123 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009124 @@ -35635,8 +35838,8 @@ synonym: "chemoreceptor cells" EXACT PLURAL [] xref: CL:0000206 xref: TAO:0009124 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009125 @@ -35649,9 +35852,9 @@ synonym: "Schultze's cell" EXACT [] xref: CL:0000207 xref: TAO:0009125 is_a: ZFA:0009124 ! chemoreceptor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009126 @@ -35662,9 +35865,9 @@ synonym: "taste receptor cells" EXACT PLURAL [] xref: CL:0000209 xref: TAO:0009126 is_a: ZFA:0009124 ! chemoreceptor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001074 ! taste bud -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009127 @@ -35676,8 +35879,8 @@ synonym: "photoreceptor cells" EXACT PLURAL [] xref: CL:0000210 xref: TAO:0009127 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009128 @@ -35689,8 +35892,8 @@ synonym: "electrically active cells" EXACT PLURAL [] xref: CL:0000211 xref: TAO:0009128 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009129 @@ -35702,8 +35905,8 @@ synonym: "absorptive cells" EXACT PLURAL [] xref: CL:0000212 xref: TAO:0009129 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009130 @@ -35715,8 +35918,8 @@ synonym: "boundary cell" EXACT [] xref: CL:0000213 xref: TAO:0009130 is_a: ZFA:0009132 ! barrier cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009131 @@ -35729,9 +35932,9 @@ xref: TAO:0009131 is_a: ZFA:0009093 ! GAG secreting cell is_a: ZFA:0009130 ! lining cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005153 ! synovial joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009132 @@ -35743,8 +35946,8 @@ synonym: "barrier cells" EXACT PLURAL [] xref: CL:0000215 xref: TAO:0009132 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009133 @@ -35756,9 +35959,9 @@ synonym: "Sertoli cells" EXACT PLURAL [] xref: CL:0000216 xref: TAO:0009133 is_a: ZFA:0009132 ! barrier cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005882 ! spermatogenic cyst -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0009134 @@ -35769,8 +35972,8 @@ synonym: "insulating cells" EXACT PLURAL [] xref: CL:0000217 xref: TAO:0009134 is_a: ZFA:0009132 ! barrier cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009135 @@ -35785,9 +35988,9 @@ is_a: ZFA:0009134 ! insulating cell is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) is_a: ZFA:0009163 ! myelin accumulating cell relationship: develops_from ZFA:0001725 ! immature Schwann cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009136 @@ -35799,8 +36002,8 @@ synonym: "motile cells" EXACT PLURAL [] xref: CL:0000219 xref: TAO:0009136 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009137 @@ -35812,9 +36015,9 @@ synonym: "ectoderm cell" EXACT [] xref: CL:0000221 xref: TAO:0009137 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009138 @@ -35827,9 +36030,9 @@ synonym: "mesoderm cell" EXACT [] xref: CL:0000222 xref: TAO:0009138 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009139 @@ -35841,9 +36044,9 @@ synonym: "endoderm cell" EXACT [] xref: CL:0000223 xref: TAO:0009139 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000017 ! endoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009140 @@ -35855,8 +36058,8 @@ synonym: "phagocytes" EXACT PLURAL [] xref: CL:0000234 xref: TAO:0009140 is_a: ZFA:0009136 ! motile cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009141 @@ -35870,9 +36073,9 @@ xref: TAO:0009141 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009265 ! monocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009142 @@ -35887,8 +36090,8 @@ xref: CL:0000236 xref: TAO:0009142 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009349 ! pro-B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009143 @@ -35899,8 +36102,8 @@ synonym: "brush border epithelial cells" EXACT PLURAL [] xref: CL:0000239 xref: TAO:0009143 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009144 @@ -35911,8 +36114,8 @@ synonym: "stratified squamous epithelial cells" EXACT PLURAL [] xref: CL:0000240 xref: TAO:0009144 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009145 @@ -35923,8 +36126,8 @@ synonym: "stratified cuboidal epithelial cells" EXACT PLURAL [] xref: CL:0000241 xref: TAO:0009145 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009146 @@ -35936,8 +36139,8 @@ synonym: "Merkel cells" EXACT PLURAL [] xref: CL:0000242 xref: TAO:0009146 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009147 @@ -35950,8 +36153,8 @@ xref: CL:0000243 xref: TAO:0009147 is_a: ZFA:0009073 ! glial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009148 @@ -35962,8 +36165,8 @@ synonym: "transitional epithelial cells" EXACT PLURAL [] xref: CL:0000244 xref: TAO:0009148 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009149 @@ -35977,10 +36180,10 @@ xref: CL:0000246 xref: TAO:0009149 is_a: ZFA:0005865 ! reticulospinal neuron is_a: ZFA:0009194 ! CNS short range interneuron -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009150 @@ -35995,8 +36198,8 @@ synonym: "Rohon-Beard neurons" EXACT PLURAL [] xref: CL:0000247 xref: TAO:0009150 is_a: ZFA:0009053 ! sensory neuron -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009151 @@ -36007,8 +36210,8 @@ synonym: "hatching gland cells" EXACT PLURAL [] xref: CL:0000249 xref: TAO:0009151 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009152 @@ -36019,8 +36222,8 @@ synonym: "extramedullary cells" EXACT PLURAL [] xref: CL:0000251 xref: TAO:0009152 is_a: ZFA:0009053 ! sensory neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009153 @@ -36031,9 +36234,9 @@ synonym: "eurydendroid cells" EXACT PLURAL [] xref: CL:0000253 xref: TAO:0009153 is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009154 @@ -36044,10 +36247,10 @@ synonym: "eye photoreceptor cells" EXACT PLURAL [] xref: CL:0000287 xref: TAO:0009154 is_a: ZFA:0009127 ! photoreceptor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer relationship: part_of ZFA:0001464 ! retinal outer nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009155 @@ -36064,9 +36267,9 @@ synonym: "somatrophic cell" RELATED [] xref: CL:0000295 xref: TAO:0009155 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009156 @@ -36078,9 +36281,9 @@ synonym: "gametes" EXACT PLURAL [] xref: CL:0000300 xref: TAO:0009156 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000413 ! gonad -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0009157 @@ -36091,8 +36294,8 @@ synonym: "keratin accumulating cells" EXACT PLURAL [] xref: CL:0000311 xref: TAO:0009157 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009158 @@ -36105,8 +36308,8 @@ xref: CL:0000312 xref: TAO:0009158 is_a: ZFA:0009157 ! keratin accumulating cell relationship: develops_from ZFA:0007124 ! keratinocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009159 @@ -36118,10 +36321,10 @@ synonym: "mucous cell" EXACT [] xref: CL:0000319 xref: TAO:0009159 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009160 @@ -36132,8 +36335,8 @@ synonym: "seminal fluid secreting cells" EXACT PLURAL [] xref: CL:0000321 xref: TAO:0009160 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009161 @@ -36155,8 +36358,8 @@ synonym: "extracellular matrix secreting cells" EXACT PLURAL [] xref: CL:0000327 xref: TAO:0009162 is_a: ZFA:0009226 ! stromal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009163 @@ -36167,8 +36370,8 @@ synonym: "myelin accumulating cells" EXACT PLURAL [] xref: CL:0000328 xref: TAO:0009163 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009164 @@ -36179,8 +36382,8 @@ synonym: "oxygen accumulating cells" EXACT PLURAL [] xref: CL:0000329 xref: TAO:0009164 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009165 @@ -36190,9 +36393,9 @@ def: "A cell of the neural crest. The neural crest is a strip of specialized ect subset: cell_slim synonym: "neural crest cells" EXACT PLURAL [] is_a: ZFA:0007089 ! embryonic cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000045 ! neural crest -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009166 @@ -36204,8 +36407,8 @@ xref: CL:0000335 xref: TAO:0009166 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009167 @@ -36217,8 +36420,8 @@ xref: CL:0000336 xref: TAO:0009167 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009168 @@ -36228,8 +36431,8 @@ subset: cell_slim xref: CL:0000337 xref: TAO:0009168 is_a: ZFA:0009011 ! neuroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009169 @@ -36240,8 +36443,8 @@ synonym: "glioblasts (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000339 xref: TAO:0009169 is_a: ZFA:0009010 ! glioblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009170 @@ -36252,8 +36455,8 @@ synonym: "pigment cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000342 xref: TAO:0009170 is_a: ZFA:0009090 ! pigment cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009171 @@ -36264,9 +36467,9 @@ synonym: "visual pigment cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000343 xref: TAO:0009171 is_a: ZFA:0009170 ! pigment cell (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009172 @@ -36289,9 +36492,9 @@ xref: CL:0000345 xref: TAO:0009173 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005140 ! dental papilla -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009174 @@ -36304,9 +36507,9 @@ xref: CL:0000347 xref: TAO:0009174 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005563 ! sclera -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009175 @@ -36319,8 +36522,8 @@ xref: CL:0000348 xref: TAO:0009175 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009176 @@ -36331,8 +36534,8 @@ synonym: "extraembryonic cells" EXACT PLURAL [] xref: CL:0000349 xref: TAO:0009176 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009177 @@ -36344,9 +36547,9 @@ synonym: "blastomere" RELATED [] xref: CL:0000353 xref: TAO:0009177 is_a: ZFA:0009002 ! early embryonic cell -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0009178 @@ -36357,8 +36560,8 @@ synonym: "blastemal cells" EXACT PLURAL [] xref: CL:0000354 xref: TAO:0009178 is_a: ZFA:0009020 ! multi fate stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009179 @@ -36370,8 +36573,8 @@ xref: CL:0000355 xref: TAO:0009179 is_a: ZFA:0009013 ! single fate stem cell is_a: ZFA:0009291 ! muscle precursor cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009180 @@ -36382,8 +36585,8 @@ synonym: "stratified epithelial stem cells" EXACT PLURAL [] xref: CL:0000357 xref: TAO:0009180 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009181 @@ -36395,8 +36598,8 @@ xref: CL:0000359 xref: TAO:0009181 is_a: ZFA:0005944 ! mural cell is_a: ZFA:0009118 ! smooth muscle cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009182 @@ -36408,8 +36611,8 @@ synonym: "gastrula cells" EXACT PLURAL [] xref: CL:0000361 xref: TAO:0009182 is_a: ZFA:0009002 ! early embryonic cell -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0009183 @@ -36421,8 +36624,8 @@ synonym: "epidermal cells" EXACT PLURAL [] xref: CL:0000362 xref: TAO:0009183 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009184 @@ -36434,8 +36637,8 @@ xref: CL:0000375 xref: TAO:0009184 is_a: ZFA:0009013 ! single fate stem cell relationship: develops_from ZFA:0009166 ! mesenchyme condensation cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009185 @@ -36446,8 +36649,8 @@ synonym: "sensory processing neurons" EXACT PLURAL [] xref: CL:0000379 xref: TAO:0009185 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009186 @@ -36458,8 +36661,8 @@ synonym: "neurosecretory neurons" EXACT PLURAL [] xref: CL:0000381 xref: TAO:0009186 is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009187 @@ -36471,8 +36674,8 @@ xref: CL:0000383 xref: TAO:0009187 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009188 @@ -36483,9 +36686,9 @@ synonym: "ligament cells" EXACT PLURAL [] xref: CL:0000384 xref: TAO:0009188 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001675 ! ligament -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009189 @@ -36496,8 +36699,8 @@ synonym: "muscle attachment cell" EXACT [] xref: CL:0000388 xref: TAO:0009189 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009190 @@ -36509,8 +36712,8 @@ synonym: "electrically responsive cells" EXACT PLURAL [] xref: CL:0000393 xref: TAO:0009190 is_a: ZFA:0009128 ! electrically active cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009191 @@ -36523,8 +36726,8 @@ xref: CL:0000402 xref: TAO:0009191 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009193 @@ -36536,8 +36739,8 @@ synonym: "electrically signaling cells" EXACT PLURAL [] xref: CL:0000404 xref: TAO:0009193 is_a: ZFA:0009128 ! electrically active cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009194 @@ -36548,8 +36751,8 @@ synonym: "CNS short range interneurons" EXACT PLURAL [] xref: CL:0000406 xref: TAO:0009194 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009195 @@ -36560,8 +36763,8 @@ synonym: "CNS long range interneurons" EXACT PLURAL [] xref: CL:0000410 xref: TAO:0009195 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009196 @@ -36572,8 +36775,8 @@ synonym: "hypodermal cells" EXACT PLURAL [] xref: CL:0000411 xref: TAO:0009196 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009198 @@ -36586,9 +36789,9 @@ xref: CL:0000430 xref: TAO:0009198 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005245 ! xanthoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0009199 @@ -36603,11 +36806,11 @@ xref: CL:0000431 xref: TAO:0009199 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005328 ! iridoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0005914 ! argentum relationship: part_of ZFA:0005916 ! tapetum lucidum -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0009200 @@ -36618,8 +36821,8 @@ synonym: "reticular cells" EXACT PLURAL [] xref: CL:0000432 xref: TAO:0009200 is_a: ZFA:0009026 ! fibroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009201 @@ -36630,8 +36833,8 @@ synonym: "alkali secreting cells" EXACT PLURAL [] xref: CL:0000435 xref: TAO:0009201 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009202 @@ -36644,9 +36847,9 @@ synonym: "gonadotroph" EXACT [] xref: CL:0000437 xref: TAO:0009202 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009203 @@ -36659,9 +36862,9 @@ synonym: "gonadotroph" RELATED [] xref: CL:0000438 xref: TAO:0009203 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009204 @@ -36680,9 +36883,9 @@ synonym: "mammotropic cell" EXACT [] xref: CL:0000439 xref: TAO:0009204 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005580 ! rostral pars anterior -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009205 @@ -36695,9 +36898,9 @@ synonym: "melanotroph" EXACT [] xref: CL:0000440 xref: TAO:0009205 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001197 ! pars intermedia -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009206 @@ -36708,8 +36911,8 @@ synonym: "calcitonin secreting cells" EXACT PLURAL [] xref: CL:0000443 xref: TAO:0009206 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009207 @@ -36719,8 +36922,8 @@ subset: cell_slim synonym: "chief cell" EXACT [] xref: TAO:0009207 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009209 @@ -36733,8 +36936,8 @@ synonym: "veiled cell" RELATED [] xref: CL:0000451 xref: TAO:0009209 is_a: ZFA:0009088 ! professional antigen presenting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009210 @@ -36745,8 +36948,8 @@ synonym: "thyroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000452 xref: TAO:0009210 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009211 @@ -36757,8 +36960,8 @@ synonym: "epinephrin secreting cells" EXACT PLURAL [] xref: CL:0000454 xref: TAO:0009211 is_a: ZFA:0009212 ! biogenic amine secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009212 @@ -36769,8 +36972,8 @@ synonym: "biogenic amine secreting cells" EXACT PLURAL [] xref: CL:0000457 xref: TAO:0009212 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009213 @@ -36781,8 +36984,8 @@ synonym: "serotin secreting cells" EXACT PLURAL [] xref: CL:0000458 xref: TAO:0009213 is_a: ZFA:0009212 ! biogenic amine secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009214 @@ -36795,8 +36998,8 @@ synonym: "norepinephrin secreting cells" EXACT PLURAL [] xref: CL:0000459 xref: TAO:0009214 is_a: ZFA:0009212 ! biogenic amine secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009215 @@ -36807,8 +37010,8 @@ synonym: "glucocorticoid secreting cells" EXACT PLURAL [] xref: CL:0000460 xref: TAO:0009215 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009216 @@ -36824,9 +37027,9 @@ synonym: "corticotropin hormone secreting cell" EXACT [] xref: CL:0000467 xref: TAO:0009216 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005580 ! rostral pars anterior -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009217 @@ -36837,9 +37040,9 @@ synonym: "digestive enzyme secreting cells" EXACT PLURAL [] xref: CL:0000470 xref: TAO:0009217 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009218 @@ -36853,9 +37056,9 @@ synonym: "thyrotroph" EXACT [] xref: CL:0000476 xref: TAO:0009218 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009219 @@ -36866,8 +37069,8 @@ synonym: "visible light photoreceptor cells" EXACT PLURAL [] xref: CL:0000488 xref: TAO:0009219 is_a: ZFA:0009127 ! photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009220 @@ -36878,8 +37081,8 @@ synonym: "photopic photoreceptor cells" EXACT PLURAL [] xref: CL:0000490 xref: TAO:0009220 is_a: ZFA:0009219 ! visible light photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009221 @@ -36890,8 +37093,8 @@ synonym: "UV sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000494 xref: TAO:0009221 is_a: ZFA:0009127 ! photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009222 @@ -36902,8 +37105,8 @@ synonym: "blue sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000495 xref: TAO:0009222 is_a: ZFA:0009220 ! photopic photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009223 @@ -36914,8 +37117,8 @@ synonym: "green sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000496 xref: TAO:0009223 is_a: ZFA:0009220 ! photopic photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009224 @@ -36926,8 +37129,8 @@ synonym: "red sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000497 xref: TAO:0009224 is_a: ZFA:0009220 ! photopic photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009225 @@ -36938,8 +37141,8 @@ synonym: "inhibitory interneurons" EXACT PLURAL [] xref: CL:0000498 xref: TAO:0009225 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009226 @@ -36952,8 +37155,8 @@ xref: CL:0000499 xref: TAO:0009226 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009227 @@ -36965,8 +37168,8 @@ synonym: "granulosa cells" EXACT PLURAL [] xref: CL:0000501 xref: TAO:0009227 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009228 @@ -36979,9 +37182,9 @@ xref: CL:0000502 xref: TAO:0009228 is_a: ZFA:0009097 ! enteroendocrine cell is_a: ZFA:0009105 ! somatostatin secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009229 @@ -36994,8 +37197,8 @@ xref: CL:0000503 xref: TAO:0009229 is_a: ZFA:0009226 ! stromal cell is_a: ZFA:0009271 ! androgen secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009230 @@ -37006,8 +37209,8 @@ synonym: "substance P secreting cells" EXACT PLURAL [] xref: CL:0000505 xref: TAO:0009230 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009231 @@ -37018,8 +37221,8 @@ synonym: "enkephalin secreting cells" EXACT PLURAL [] xref: CL:0000506 xref: TAO:0009231 is_a: ZFA:0009232 ! endorphin secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009232 @@ -37030,8 +37233,8 @@ synonym: "endorphin secreting cells" EXACT PLURAL [] xref: CL:0000507 xref: TAO:0009232 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009233 @@ -37042,8 +37245,8 @@ synonym: "paracrine cells" EXACT PLURAL [] xref: CL:0000512 xref: TAO:0009233 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009234 @@ -37055,8 +37258,8 @@ synonym: "cardioblast" RELATED [] xref: CL:0000513 xref: TAO:0009234 is_a: ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009235 @@ -37068,8 +37271,8 @@ synonym: "satellite cell" RELATED [] xref: CL:0000514 xref: TAO:0009235 is_a: ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009236 @@ -37081,8 +37284,8 @@ synonym: "skeletal muscle myoblasts" EXACT PLURAL [] xref: CL:0000515 xref: TAO:0009236 is_a: ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009237 @@ -37095,8 +37298,8 @@ xref: CL:0000516 xref: TAO:0009237 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009238 @@ -37109,8 +37312,8 @@ xref: CL:0000526 xref: TAO:0009238 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009239 @@ -37123,8 +37326,8 @@ xref: CL:0000527 xref: TAO:0009239 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009240 @@ -37136,8 +37339,8 @@ synonym: "nitrergic neurons" EXACT PLURAL [] xref: CL:0000528 xref: TAO:0009240 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009241 @@ -37149,8 +37352,8 @@ xref: CL:0000529 xref: TAO:0009241 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009242 @@ -37161,9 +37364,9 @@ subset: cell_slim xref: CL:0000530 xref: TAO:0009242 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001120 ! neuroectoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009243 @@ -37176,8 +37379,8 @@ synonym: "caudal primary motoneuron" EXACT [] xref: CL:0000532 xref: TAO:0009243 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009244 @@ -37191,8 +37394,8 @@ xref: CL:0000533 xref: TAO:0009244 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009245 @@ -37204,8 +37407,8 @@ xref: CL:0000534 xref: TAO:0009245 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009246 @@ -37216,8 +37419,8 @@ synonym: "secondary neurons" EXACT PLURAL [] xref: CL:0000535 xref: TAO:0009246 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009247 @@ -37231,8 +37434,8 @@ xref: CL:0000536 xref: TAO:0009247 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009246 ! secondary neuron -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009248 @@ -37246,9 +37449,9 @@ xref: TAO:0009248 is_a: ZFA:0009190 ! electrically responsive cell is_a: ZFA:0009193 ! electrically signaling cell relationship: develops_from ZFA:0009011 ! neuroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009249 @@ -37261,8 +37464,8 @@ xref: CL:0000541 xref: TAO:0009249 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009250 @@ -37275,8 +37478,8 @@ xref: CL:0000542 xref: TAO:0009250 is_a: ZFA:0009357 ! mononuclear cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009251 @@ -37292,8 +37495,8 @@ xref: CL:0000557 xref: TAO:0009251 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009252 @@ -37306,8 +37509,8 @@ xref: CL:0000558 xref: TAO:0009252 is_a: ZFA:0009044 ! blood cell is_a: ZFA:0009325 ! erythroid lineage cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009253 @@ -37320,8 +37523,8 @@ xref: CL:0000559 xref: TAO:0009253 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009017 ! monoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009254 @@ -37338,8 +37541,8 @@ xref: CL:0000560 xref: TAO:0009254 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009268 ! neutrophilic metamyelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009255 @@ -37351,9 +37554,9 @@ synonym: "amacrine neuron" EXACT [] xref: CL:0000561 xref: TAO:0009255 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009256 @@ -37366,8 +37569,8 @@ synonym: "red blood cell" EXACT [] xref: CL:0000562 xref: TAO:0009256 is_a: ZFA:0009044 ! blood cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009257 @@ -37382,8 +37585,8 @@ xref: CL:0000564 xref: TAO:0009257 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009018 ! neutrophilic myeloblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009258 @@ -37395,8 +37598,8 @@ xref: CL:0000566 xref: TAO:0009258 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009259 @@ -37410,8 +37613,8 @@ xref: TAO:0009259 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009260 @@ -37423,8 +37626,8 @@ xref: CL:0000570 xref: TAO:0009260 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009261 @@ -37438,9 +37641,9 @@ xref: CL:0000571 xref: TAO:0009261 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005329 ! leucoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009262 @@ -37452,8 +37655,8 @@ synonym: "retinal cone cells" EXACT PLURAL [] xref: CL:0000573 xref: TAO:0009262 is_a: ZFA:0009154 ! eye photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009263 @@ -37466,9 +37669,9 @@ xref: CL:0000574 xref: TAO:0009263 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005331 ! pigment erythroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009264 @@ -37479,8 +37682,8 @@ synonym: "corneal epithelial cells" EXACT PLURAL [] xref: CL:0000575 xref: TAO:0009264 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009265 @@ -37494,8 +37697,8 @@ xref: TAO:0009265 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009253 ! promonocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009266 @@ -37508,8 +37711,8 @@ xref: CL:0000580 xref: TAO:0009266 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009267 @@ -37521,8 +37724,8 @@ synonym: "peritoneal macrophages" EXACT PLURAL [] xref: CL:0000581 xref: TAO:0009267 is_a: ZFA:0009141 ! macrophage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009268 @@ -37535,8 +37738,8 @@ xref: CL:0000582 xref: TAO:0009268 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009266 ! neutrophilic myelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009269 @@ -37548,9 +37751,9 @@ synonym: "enterocytes" EXACT PLURAL [] xref: CL:0000584 xref: TAO:0009269 is_a: ZFA:0009143 ! brush border epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009270 @@ -37562,8 +37765,8 @@ synonym: "odontoclasts" EXACT PLURAL [] xref: CL:0000588 xref: TAO:0009270 is_a: ZFA:0009047 ! osteoclast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009271 @@ -37574,8 +37777,8 @@ synonym: "androgen secreting cells" EXACT PLURAL [] xref: CL:0000593 xref: TAO:0009271 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009272 @@ -37587,8 +37790,8 @@ synonym: "skeletal muscle satellite cells" EXACT PLURAL [] xref: CL:0000594 xref: TAO:0009272 is_a: ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009273 @@ -37600,8 +37803,8 @@ synonym: "pyramidal cells" EXACT PLURAL [] xref: CL:0000598 xref: TAO:0009273 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009274 @@ -37613,8 +37816,8 @@ synonym: "pressoreceptor cells" EXACT PLURAL [] xref: CL:0000602 xref: TAO:0009274 is_a: ZFA:0009370 ! stretch receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009275 @@ -37626,8 +37829,8 @@ synonym: "retinal rod cells" EXACT PLURAL [] xref: CL:0000604 xref: TAO:0009275 is_a: ZFA:0009154 ! eye photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009276 @@ -37639,8 +37842,8 @@ synonym: "GABAergic neurons" EXACT PLURAL [] xref: CL:0000617 xref: TAO:0009276 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009277 @@ -37652,8 +37855,8 @@ synonym: "acinar cells" EXACT PLURAL [] xref: CL:0000622 xref: TAO:0009277 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009278 @@ -37668,8 +37871,8 @@ xref: CL:0000623 xref: TAO:0009278 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009348 ! pro-NK cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009279 @@ -37682,8 +37885,8 @@ synonym: "perisinusoidal cell" EXACT [] xref: CL:0000632 xref: TAO:0009279 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009280 @@ -37696,9 +37899,9 @@ synonym: "Muller cells" EXACT PLURAL [] xref: CL:0000636 xref: TAO:0009280 is_a: ZFA:0009075 ! astrocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009281 @@ -37710,9 +37913,9 @@ synonym: "folliculostellate cells" EXACT PLURAL [] xref: CL:0000642 xref: TAO:0009281 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009282 @@ -37723,8 +37926,8 @@ synonym: "Bergmann glial cells" EXACT PLURAL [] xref: CL:0000644 xref: TAO:0009282 is_a: ZFA:0009075 ! astrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009283 @@ -37736,8 +37939,8 @@ xref: CL:0000650 xref: TAO:0009283 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009284 @@ -37748,9 +37951,9 @@ synonym: "pinealocytes" EXACT PLURAL [] xref: CL:0000652 xref: TAO:0009284 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000019 ! epiphysis -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009285 @@ -37761,9 +37964,9 @@ synonym: "podocytes" EXACT PLURAL [] xref: CL:0000653 xref: TAO:0009285 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000163 ! renal system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009286 @@ -37774,8 +37977,8 @@ synonym: "window cell" EXACT [] xref: CL:0000666 xref: TAO:0009286 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009287 @@ -37786,8 +37989,8 @@ synonym: "collagen secreting cells" EXACT PLURAL [] xref: CL:0000667 xref: TAO:0009287 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009288 @@ -37801,9 +38004,9 @@ xref: CL:0000670 xref: TAO:0009288 is_a: ZFA:0009016 ! germ line cell is_a: ZFA:0009136 ! motile cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0009289 @@ -37815,9 +38018,9 @@ synonym: "gut absorptive cells" EXACT PLURAL [] xref: CL:0000677 xref: TAO:0009289 is_a: ZFA:0009129 ! absorptive cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009290 @@ -37828,8 +38031,8 @@ synonym: "glutamatergic neurons" EXACT PLURAL [] xref: CL:0000679 xref: TAO:0009290 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009291 @@ -37842,8 +38045,8 @@ xref: TAO:0009291 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009292 @@ -37857,8 +38060,8 @@ xref: TAO:0009292 is_a: ZFA:0009168 ! neuroblast (sensu Vertebrata) relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009293 @@ -37870,8 +38073,8 @@ synonym: "M cells" EXACT PLURAL [] xref: CL:0000682 xref: TAO:0009293 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009294 @@ -37883,8 +38086,8 @@ synonym: "ependymoglial cells" EXACT PLURAL [] xref: CL:0000683 xref: TAO:0009294 is_a: ZFA:0009075 ! astrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009295 @@ -37896,8 +38099,8 @@ xref: CL:0000686 xref: TAO:0009295 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009296 @@ -37909,8 +38112,8 @@ synonym: "perijunctional fibroblasts" EXACT PLURAL [] xref: CL:0000688 xref: TAO:0009296 is_a: ZFA:0009026 ! fibroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009297 @@ -37921,8 +38124,8 @@ synonym: "stellate interneurons" EXACT PLURAL [] xref: CL:0000691 xref: TAO:0009297 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009298 @@ -37935,9 +38138,9 @@ xref: CL:0000692 xref: TAO:0009298 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009073 ! glial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009299 @@ -37949,8 +38152,8 @@ synonym: "spiderweb cell" EXACT [] xref: CL:0000693 xref: TAO:0009299 is_a: ZFA:0009297 ! stellate interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009300 @@ -37962,8 +38165,8 @@ synonym: "Cajal-Retzius cells" EXACT PLURAL [] xref: CL:0000695 xref: TAO:0009300 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009301 @@ -37975,8 +38178,8 @@ synonym: "dopaminergic neurons" EXACT PLURAL [] xref: CL:0000700 xref: TAO:0009301 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009302 @@ -37988,8 +38191,8 @@ synonym: "sustentacular cells" EXACT PLURAL [] xref: CL:0000703 xref: TAO:0009302 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009303 @@ -38001,8 +38204,8 @@ synonym: "endothelial tip cells" EXACT PLURAL [] xref: CL:0000704 xref: TAO:0009303 is_a: ZFA:0009036 ! blood vessel endothelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009304 @@ -38014,9 +38217,9 @@ synonym: "choroid plexus epithelial cells" EXACT PLURAL [] xref: CL:0000706 xref: TAO:0009304 is_a: ZFA:0009033 ! ependymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001443 ! choroid plexus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009305 @@ -38029,8 +38232,8 @@ synonym: "leptomeningeal cells" EXACT PLURAL [] xref: CL:0000708 xref: TAO:0009305 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009306 @@ -38042,22 +38245,22 @@ xref: CL:0000710 xref: TAO:0009306 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009307 name: somatic stem cell namespace: zebrafish_anatomy -def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:CJM] +def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:cjm] comment: Definition originally referred to GO:0048103. Changed to GOC: CJM to match other references. subset: cell_slim synonym: "somatic stem cells" EXACT PLURAL [] xref: CL:0000723 xref: TAO:0009307 -is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +is_a: ZFA:0005957 ! stem cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009308 @@ -38069,8 +38272,8 @@ synonym: "urothelial cells" EXACT PLURAL [] xref: CL:0000731 xref: TAO:0009308 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009309 @@ -38086,9 +38289,9 @@ xref: TAO:0009309 is_a: ZFA:0005830 ! hematopoietic cell is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009310 @@ -38101,9 +38304,9 @@ synonym: "RGC" EXACT [] xref: CL:0000740 xref: TAO:0009310 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000024 ! retinal ganglion cell layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009311 @@ -38115,8 +38318,8 @@ synonym: "SACMN" EXACT [] xref: CL:0000741 xref: TAO:0009311 is_a: ZFA:0009052 ! motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009312 @@ -38128,8 +38331,8 @@ synonym: "periarticular chondrocytes" EXACT PLURAL [] xref: CL:0000742 xref: TAO:0009312 is_a: ZFA:0009084 ! chondrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009313 @@ -38141,8 +38344,8 @@ synonym: "hypertrophic chondrocytes" EXACT PLURAL [] xref: CL:0000743 xref: TAO:0009313 is_a: ZFA:0009084 ! chondrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009314 @@ -38154,8 +38357,8 @@ synonym: "columnar chondrocytes" EXACT PLURAL [] xref: CL:0000744 xref: TAO:0009314 is_a: ZFA:0009084 ! chondrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009315 @@ -38167,9 +38370,9 @@ synonym: "horizontal cells" EXACT PLURAL [] xref: CL:0000745 xref: TAO:0009315 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009316 @@ -38182,10 +38385,10 @@ synonym: "cardiomyocyte" EXACT [] xref: CL:0000746 xref: TAO:0009316 is_a: ZFA:0005784 ! striated muscle cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001319 ! myocardium relationship: part_of ZFA:0005280 ! cardiac muscle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009317 @@ -38198,9 +38401,9 @@ xref: CL:0000747 xref: TAO:0009317 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005332 ! cyanoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009318 @@ -38211,8 +38414,8 @@ subset: cell_slim xref: CL:0000748 xref: TAO:0009318 is_a: ZFA:0009055 ! bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009319 @@ -38224,8 +38427,8 @@ synonym: "ON-bipolar cells" EXACT PLURAL [] xref: CL:0000749 xref: TAO:0009319 is_a: ZFA:0009318 ! retinal bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009320 @@ -38237,8 +38440,8 @@ synonym: "OFF-bipolar cells" EXACT PLURAL [] xref: CL:0000750 xref: TAO:0009320 is_a: ZFA:0009318 ! retinal bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009321 @@ -38250,8 +38453,8 @@ synonym: "rod bipolar cells" EXACT PLURAL [] xref: CL:0000751 xref: TAO:0009321 is_a: ZFA:0009319 ! ON-bipolar cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009322 @@ -38263,8 +38466,8 @@ synonym: "cone retinal bipolar cells" EXACT PLURAL [] xref: CL:0000752 xref: TAO:0009322 is_a: ZFA:0009318 ! retinal bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009323 @@ -38279,8 +38482,8 @@ xref: TAO:0009323 is_a: ZFA:0009044 ! blood cell is_a: ZFA:0009324 ! myeloid cell relationship: develops_from ZFA:0009351 ! thromboblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009324 @@ -38293,8 +38496,8 @@ xref: CL:0000763 xref: TAO:0009324 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009325 @@ -38306,8 +38509,8 @@ synonym: "erythroid lineage cells" EXACT PLURAL [] xref: CL:0000764 xref: TAO:0009325 is_a: ZFA:0009324 ! myeloid cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009326 @@ -38321,8 +38524,8 @@ xref: TAO:0009326 is_a: ZFA:0009309 ! leukocyte is_a: ZFA:0009324 ! myeloid cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009327 @@ -38344,8 +38547,8 @@ synonym: "polynuclear neutrophilic leukocyte" RELATED [] xref: CL:0000775 xref: TAO:0009327 is_a: ZFA:0009048 ! granulocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009328 @@ -38361,8 +38564,8 @@ xref: CL:0000776 xref: TAO:0009328 is_a: ZFA:0009327 ! neutrophil relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009329 @@ -38375,8 +38578,8 @@ xref: CL:0000778 xref: TAO:0009329 is_a: ZFA:0009047 ! osteoclast is_a: ZFA:0009064 ! mononuclear phagocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009330 @@ -38389,8 +38592,8 @@ xref: CL:0000781 xref: TAO:0009330 is_a: ZFA:0009270 ! odontoclast is_a: ZFA:0009329 ! mononuclear osteoclast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009331 @@ -38407,8 +38610,8 @@ is_a: ZFA:0009088 ! professional antigen presenting cell is_a: ZFA:0009142 ! B cell relationship: develops_from ZFA:0009343 ! immature B cell relationship: develops_from ZFA:0009345 ! transitional stage B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009332 @@ -38421,8 +38624,8 @@ xref: CL:0000786 xref: TAO:0009332 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009331 ! mature B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009333 @@ -38436,8 +38639,8 @@ synonym: "memory B-lymphocyte" EXACT [] xref: CL:0000787 xref: TAO:0009333 is_a: ZFA:0009331 ! mature B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009334 @@ -38451,8 +38654,8 @@ synonym: "naive B-lymphocyte" EXACT [] xref: CL:0000788 xref: TAO:0009334 is_a: ZFA:0009331 ! mature B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009335 @@ -38466,8 +38669,8 @@ synonym: "alpha-beta T-lymphocyte" EXACT [] xref: CL:0000789 xref: TAO:0009335 is_a: ZFA:0009046 ! T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009336 @@ -38483,8 +38686,8 @@ xref: CL:0000798 xref: TAO:0009336 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009350 ! pro-T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009337 @@ -38499,8 +38702,8 @@ synonym: "immature gamma-delta T-lymphocyte" EXACT [] xref: CL:0000799 xref: TAO:0009337 is_a: ZFA:0009336 ! gamma-delta T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009338 @@ -38515,8 +38718,8 @@ xref: CL:0000800 xref: TAO:0009338 is_a: ZFA:0009336 ! gamma-delta T cell relationship: develops_from ZFA:0009337 ! immature gamma-delta T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009339 @@ -38532,8 +38735,8 @@ synonym: "intraepithelial lymphocyte" RELATED [] xref: CL:0000801 xref: TAO:0009339 is_a: ZFA:0009338 ! mature gamma-delta T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009342 @@ -38548,8 +38751,8 @@ xref: CL:0000813 xref: TAO:0009342 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009046 ! T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009343 @@ -38565,8 +38768,8 @@ xref: CL:0000816 xref: TAO:0009343 is_a: ZFA:0009344 ! precursor B cell relationship: develops_from ZFA:0009349 ! pro-B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009344 @@ -38579,8 +38782,8 @@ xref: CL:0000817 xref: TAO:0009344 is_a: ZFA:0009142 ! B cell relationship: develops_from ZFA:0009349 ! pro-B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009345 @@ -38597,8 +38800,8 @@ synonym: "transitional stage B-lymphocyte" EXACT [] xref: CL:0000818 xref: TAO:0009345 is_a: ZFA:0009142 ! B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009346 @@ -38612,8 +38815,8 @@ xref: CL:0000823 xref: TAO:0009346 is_a: ZFA:0009278 ! natural killer cell relationship: develops_from ZFA:0009348 ! pro-NK cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009347 @@ -38628,8 +38831,8 @@ xref: CL:0000824 xref: TAO:0009347 is_a: ZFA:0009278 ! natural killer cell relationship: develops_from ZFA:0009346 ! immature natural killer cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009348 @@ -38646,8 +38849,8 @@ xref: CL:0000825 xref: TAO:0009348 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009349 @@ -38663,8 +38866,8 @@ xref: CL:0000826 xref: TAO:0009349 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009350 @@ -38680,9 +38883,9 @@ xref: CL:0000827 xref: TAO:0009350 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001078 ! thymus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009351 @@ -38696,8 +38899,8 @@ xref: CL:0000828 xref: TAO:0009351 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009352 @@ -38709,8 +38912,8 @@ synonym: "neutrophil stem cell" RELATED [] xref: CL:0000834 xref: TAO:0009352 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009353 @@ -38723,8 +38926,8 @@ xref: CL:0000835 xref: TAO:0009353 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009354 @@ -38739,8 +38942,8 @@ xref: CL:0000837 xref: TAO:0009354 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009355 @@ -38753,8 +38956,8 @@ synonym: "lymphoid progenitor cells" EXACT PLURAL [] xref: CL:0000838 xref: TAO:0009355 is_a: ZFA:0005830 ! hematopoietic cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009356 @@ -38768,8 +38971,8 @@ synonym: "myeloid progenitor cells" EXACT PLURAL [] xref: CL:0000839 xref: TAO:0009356 is_a: ZFA:0005830 ! hematopoietic cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009357 @@ -38781,8 +38984,8 @@ synonym: "mononuclear cells" EXACT PLURAL [] xref: CL:0000842 xref: TAO:0009357 is_a: ZFA:0009309 ! leukocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009358 @@ -38795,8 +38998,8 @@ synonym: "ciliated sensory neuron" EXACT [] xref: CL:0000847 xref: TAO:0009358 is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009359 @@ -38809,8 +39012,8 @@ synonym: "microvillous sensory neuron" RELATED [] xref: CL:0000848 xref: TAO:0009359 is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009360 @@ -38824,8 +39027,8 @@ synonym: "crypt sensory neuron" EXACT [] xref: CL:0000849 xref: TAO:0009360 is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009361 @@ -38843,8 +39046,8 @@ xref: CL:0000850 xref: TAO:0009192 xref: TAO:0009361 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009362 @@ -38856,9 +39059,9 @@ synonym: "neuromast mantle cells" EXACT PLURAL [] xref: CL:0000851 xref: TAO:0009362 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009363 @@ -38870,9 +39073,9 @@ synonym: "neuromast support cells" EXACT PLURAL [] xref: CL:0000852 xref: TAO:0009363 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009364 @@ -38884,8 +39087,8 @@ synonym: "olfactory sustentacular cell" EXACT [] xref: CL:0000853 xref: TAO:0009364 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009365 @@ -38898,9 +39101,9 @@ xref: CL:0000854 xref: TAO:0009365 is_a: ZFA:0009080 ! neurectodermal cell relationship: develops_from ZFA:0009012 ! neuroplacodal cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009366 @@ -38912,8 +39115,8 @@ synonym: "hair cells" EXACT PLURAL [] xref: CL:0000855 xref: TAO:0009366 is_a: ZFA:0009120 ! mechanoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009367 @@ -38925,9 +39128,9 @@ synonym: "neuromast hair cells" EXACT PLURAL [] xref: CL:0000856 xref: TAO:0009367 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009368 @@ -38939,8 +39142,8 @@ synonym: "slow muscle myoblasts" EXACT PLURAL [] xref: CL:0000857 xref: TAO:0009368 is_a: ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009369 @@ -38952,8 +39155,8 @@ synonym: "fast muscle myoblasts" EXACT PLURAL [] xref: CL:0000858 xref: TAO:0009369 is_a: ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009370 @@ -38964,8 +39167,8 @@ synonym: "stretch receptor cells" EXACT PLURAL [] xref: CL:1000082 xref: TAO:0009370 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009371 @@ -38976,8 +39179,8 @@ synonym: "stratified keratinized epithelial stem cells" EXACT PLURAL [] xref: CL:1000083 xref: TAO:0009371 is_a: ZFA:0009180 ! stratified epithelial stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009372 @@ -38988,9 +39191,9 @@ comment: Definition not present in CL. subset: cell_slim xref: CL:0000068 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005171 ! duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-29T05:17:20Z @@ -39003,8 +39206,8 @@ subset: cell_slim xref: CL:0002518 is_a: ZFA:0009034 ! epithelial cell is_a: ZFA:0009389 ! kidney cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009375 @@ -39017,8 +39220,8 @@ xref: CL:0005010 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009374 ! kidney epithelial cell is_a: ZFA:0009388 ! meso-epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-06T01:42:07Z @@ -39030,8 +39233,8 @@ def: "A cuboidal epithelial cell of the kidney which secretes acid and reabsorbs subset: cell_slim xref: CL:0005011 is_a: ZFA:0009375 ! renal intercalated cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-06T01:42:03Z @@ -39043,9 +39246,9 @@ def: "An epithelial cell of the intrahepatic portion of the bile duct." [GOC:tfm subset: cell_slim xref: CL:0002538 is_a: ZFA:0009372 ! duct epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005169 ! intrahepatic bile duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-07-29T05:21:19Z @@ -39057,9 +39260,9 @@ def: "Epithelial cell found in the ducts of the pancreas." [GOC:tfm] subset: cell_slim xref: CL:0002079 is_a: ZFA:0009372 ! duct epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2013-07-29T05:23:07Z @@ -39072,8 +39275,8 @@ subset: cell_slim xref: CL:0002076 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-02T04:25:16Z @@ -39089,8 +39292,8 @@ xref: CL:0000710 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009385 ! ecto-epithelial cell relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009385 @@ -39102,8 +39305,8 @@ xref: CL:0002077 is_a: ZFA:0009034 ! epithelial cell is_a: ZFA:0009386 ! somatic cell relationship: develops_from ZFA:0009137 ! ectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009386 @@ -39113,8 +39316,8 @@ def: "A cell of an organism that does not pass on its genetic material to the or subset: cell_slim xref: CL:0002371 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009387 @@ -39124,8 +39327,8 @@ def: "A cell whose primary function is to support other cell types." [FB:ma, GOC subset: cell_slim xref: CL:0000630 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009388 @@ -39138,8 +39341,8 @@ xref: CL:0002078 is_a: ZFA:0009034 ! epithelial cell is_a: ZFA:0009386 ! somatic cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009389 @@ -39149,9 +39352,9 @@ def: "Cell that is part of the kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917] subset: cell_slim xref: CL:1000497 is_a: ZFA:0009386 ! somatic cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0009390 @@ -39161,8 +39364,8 @@ subset: cell_slim xref: CL:1000500 is_a: ZFA:0009389 ! kidney cell is_a: ZFA:0009392 ! connective tissue cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009391 @@ -39171,8 +39374,8 @@ namespace: zebrafish_anatomy subset: cell_slim xref: CL:1000504 is_a: ZFA:0009389 ! kidney cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009392 @@ -39182,8 +39385,8 @@ def: "A cell of the supporting or framework tissue of the body, arising chiefly subset: cell_slim xref: CL:0002320 is_a: ZFA:0009386 ! somatic cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009393 @@ -39194,8 +39397,8 @@ comment: Usually express Prox1, or prox1b. subset: cell_slim xref: CL:0005020 is_a: ZFA:0009020 ! multi fate stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-12T04:44:34Z @@ -39208,8 +39411,8 @@ subset: cell_slim xref: CL:0005021 is_a: ZFA:0009081 ! mesenchymal cell is_a: ZFA:0009393 ! lymphangioblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-12T05:01:22Z @@ -39222,8 +39425,8 @@ subset: cell_slim synonym: "parachordal lymphangioblast" NARROW [] xref: CL:0005022 is_a: ZFA:0009393 ! lymphangioblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-12T05:21:09Z @@ -39235,8 +39438,8 @@ def: "The neurons that utilize glycine as a neurotransmitter." [MP:0010385] subset: cell_slim xref: CL:1001509 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009397 @@ -39249,8 +39452,8 @@ synonym: "epithelial cell of bile duct" EXACT [] xref: CL:1000488 is_a: ZFA:0009372 ! duct epithelial cell relationship: develops_from ZFA:0009398 ! hepatoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-02T12:08:01Z @@ -39262,8 +39465,8 @@ def: "Multi fate stem cell that gives rise to both hepatocytes and cholangiocyte subset: cell_slim is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0000124 ! liver primordium -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-08-02T12:13:12Z @@ -39275,9 +39478,9 @@ def: "An epithelial cell of the intestine." [GOC:tfm] subset: cell_slim xref: CL:0002563 is_a: ZFA:0009383 ! endo-epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2013-08-02T04:26:27Z @@ -39289,9 +39492,9 @@ def: "An epithelial cell of the esophagus." [GOC:tfm] subset: cell_slim xref: CL:0002252 is_a: ZFA:0009383 ! endo-epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000204 ! esophagus -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2013-08-02T04:32:14Z @@ -39300,11 +39503,12 @@ id: ZFA:0009401 name: lens fiber cell namespace: zebrafish_anatomy def: "A vertebrate lens cell that is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye." [GOC:nv] +subset: cell_slim xref: CL:0011004 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-09-01T15:46:37Z @@ -39316,9 +39520,9 @@ def: "Cell that is part of the heart valve." [CL:editor] subset: cell_slim xref: CL:1000147 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005065 ! heart valve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-08T09:32:56Z @@ -39330,21 +39534,22 @@ def: "Cells that secrete the extracellular matrix of the heart valve." [GOC:cvs, subset: cell_slim synonym: "VIC" RELATED [ZFIN:ZDB-PUB-191202-2] is_a: ZFA:0009402 ! heart valve cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-08T09:43:48Z [Term] id: ZFA:0009404 -name: heart valve endothelial cells +name: heart valve endothelial cell namespace: zebrafish_anatomy def: "Endothelial cells that surround the heart valve extracellular matrix." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191202-2] subset: cell_slim +synonym: "heart valve endocardial cell" EXACT [ZFIN:ZDB-PUB-200221-32] synonym: "VEC" RELATED [ZFIN:ZDB-PUB-191202-2] is_a: ZFA:0009402 ! heart valve cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-08T09:48:24Z @@ -39355,367 +39560,466 @@ namespace: zebrafish_anatomy [Term] id: ZFS:0000000 -name: Unknown +name: unknown namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-050211-1 xref: ZFIN:ZDB-TERM-100331-2430 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage [Term] id: ZFS:0000001 -name: Zygote:1-cell +name: zygote:1-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-4 xref: ZFIN:ZDB-TERM-100331-2431 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage [Term] id: ZFS:0000002 -name: Cleavage:2-cell +name: cleavage:2-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-15 xref: ZFIN:ZDB-TERM-100331-2432 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000003 -name: Cleavage:4-cell +name: cleavage:4-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-11 xref: ZFIN:ZDB-TERM-100331-2433 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000004 -name: Cleavage:8-cell +name: cleavage:8-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-33 xref: ZFIN:ZDB-TERM-100331-2434 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000005 -name: Cleavage:16-cell +name: cleavage:16-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-20 xref: ZFIN:ZDB-TERM-100331-2435 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000006 -name: Cleavage:32-cell +name: cleavage:32-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-25 xref: ZFIN:ZDB-TERM-100331-2436 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000007 -name: Cleavage:64-cell +name: cleavage:64-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-28 xref: ZFIN:ZDB-TERM-100331-2437 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000008 -name: Blastula:128-cell +name: blastula:128-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-7 xref: ZFIN:ZDB-TERM-100331-2438 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000009 -name: Blastula:256-cell +name: blastula:256-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-1 xref: ZFIN:ZDB-TERM-100331-2439 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000010 -name: Blastula:512-cell +name: blastula:512-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-14 xref: ZFIN:ZDB-TERM-100331-2440 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000011 -name: Blastula:1k-cell +name: blastula:1k-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-22 xref: ZFIN:ZDB-TERM-100331-2441 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000012 -name: Blastula:High +name: blastula:high namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-27 xref: ZFIN:ZDB-TERM-100331-2442 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000013 -name: Blastula:Oblong +name: blastula:oblong namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-24 xref: ZFIN:ZDB-TERM-100331-2443 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000014 -name: Blastula:Sphere +name: blastula:sphere namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-21 xref: ZFIN:ZDB-TERM-100331-2444 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000015 -name: Blastula:Dome +name: blastula:dome namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-19 xref: ZFIN:ZDB-TERM-100331-2445 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000016 -name: Blastula:30%-epiboly +name: blastula:30%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-17 xref: ZFIN:ZDB-TERM-100331-2446 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000017 -name: Gastrula:50%-epiboly +name: gastrula:50%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-6 xref: ZFIN:ZDB-TERM-100331-2447 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000018 -name: Gastrula:Germ-ring +name: gastrula:germ-ring namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-3 xref: ZFIN:ZDB-TERM-100331-2448 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000019 -name: Gastrula:Shield +name: gastrula:shield namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-2 xref: ZFIN:ZDB-TERM-100331-2449 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000020 -name: Gastrula:75%-epiboly +name: gastrula:75%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-18 xref: ZFIN:ZDB-TERM-100331-2450 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000021 -name: Gastrula:90%-epiboly +name: gastrula:90%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-29 xref: ZFIN:ZDB-TERM-100331-2451 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000022 -name: Gastrula:Bud +name: gastrula:bud namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-12 xref: ZFIN:ZDB-TERM-100331-2452 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000023 -name: Segmentation:1-4 somites +name: segmentation:1-4 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-23 xref: ZFIN:ZDB-TERM-100331-2453 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000024 -name: Segmentation:5-9 somites +name: segmentation:5-9 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-5 xref: ZFIN:ZDB-TERM-100331-2454 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000025 -name: Segmentation:10-13 somites +name: segmentation:10-13 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-020626-1 xref: ZFIN:ZDB-TERM-100331-2455 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000026 -name: Segmentation:14-19 somites +name: segmentation:14-19 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-30 xref: ZFIN:ZDB-TERM-100331-2456 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000027 -name: Segmentation:20-25 somites +name: segmentation:20-25 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-16 xref: ZFIN:ZDB-TERM-100331-2457 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000028 -name: Segmentation:26+ somites +name: segmentation:26+ somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-34 xref: ZFIN:ZDB-TERM-100331-2458 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000029 -name: Pharyngula:Prim-5 +name: pharyngula:prim-5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-10 xref: ZFIN:ZDB-TERM-100331-2439 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000030 -name: Pharyngula:Prim-15 +name: pharyngula:prim-15 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-32 xref: ZFIN:ZDB-TERM-100331-2460 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000031 -name: Pharyngula:Prim-25 +name: pharyngula:prim-25 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-13 xref: ZFIN:ZDB-TERM-100331-2461 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000032 -name: Pharyngula:High-pec +name: pharyngula:high-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-31 xref: ZFIN:ZDB-TERM-100331-2462 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000033 -name: Hatching:Long-pec +name: hatching:long-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-9 xref: ZFIN:ZDB-TERM-100331-2463 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0007000 ! hatching [Term] id: ZFS:0000034 -name: Hatching:Pec-fin +name: hatching:pec-fin namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-26 xref: ZFIN:ZDB-TERM-100331-2464 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0007000 ! hatching [Term] id: ZFS:0000035 -name: Larval:Protruding-mouth +name: larval:protruding-mouth namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-8 xref: ZFIN:ZDB-TERM-100331-2465 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000036 -name: Larval:Day 4 +name: larval:day 4 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-35 xref: ZFIN:ZDB-TERM-100331-2466 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000037 -name: Larval:Day 5 +name: larval:day 5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-36 xref: ZFIN:ZDB-TERM-100331-2467 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000038 -name: Larval:Day 6 +name: larval:day 6 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-37 xref: ZFIN:ZDB-TERM-100331-2468 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000039 -name: Larval:Days 7-13 +name: larval:days 7-13 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-47 xref: ZFIN:ZDB-TERM-100331-2469 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000040 -name: Larval:Days 14-20 +name: larval:days 14-20 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-48 xref: ZFIN:ZDB-TERM-100331-2470 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000041 -name: Larval:Days 21-29 +name: larval:days 21-29 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-49 xref: ZFIN:ZDB-TERM-100331-2471 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000042 -name: Juvenile:Days 30-44 +name: juvenile:days 30-44 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-51 xref: ZFIN:ZDB-TERM-100331-2472 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000051 ! juvenile [Term] id: ZFS:0000043 -name: Juvenile:Days 45-89 +name: juvenile:days 45-89 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-52 xref: ZFIN:ZDB-TERM-100331-2473 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000051 ! juvenile [Term] id: ZFS:0000044 -name: Adult +name: adult namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-39 xref: ZFIN:ZDB-TERM-100331-2474 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage + +[Term] +id: ZFS:0000045 +name: blastula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000046 ! cleavage + +[Term] +id: ZFS:0000046 +name: cleavage +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage + +[Term] +id: ZFS:0000047 +name: gastrula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000045 ! blastula + +[Term] +id: ZFS:0000048 +name: larva +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0007000 ! hatching + +[Term] +id: ZFS:0000049 +name: segmentation +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000047 ! gastrula + +[Term] +id: ZFS:0000050 +name: pharyngula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000049 ! segmentation + +[Term] +id: ZFS:0000051 +name: juvenile +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000048 ! larva + +[Term] +id: ZFS:0007000 +name: hatching +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000050 ! pharyngula +created_by: yvonne +creation_date: 2014-11-05T08:33:09Z [Term] id: ZFS:0100000 -name: Stages +name: zebrafish stage namespace: zebrafish_stages [Typedef] @@ -39757,6 +40061,13 @@ xref: BFO:0000051 is_transitive: true is_a: overlaps ! overlaps +[Typedef] +id: immediately_preceded_by +name: immediately_preceded_by +def: "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y)." [goc:cjm] +xref: RO:0002087 +is_a: preceded_by ! preceded_by + [Typedef] id: overlaps name: overlaps @@ -39770,6 +40081,13 @@ is_transitive: true is_a: overlaps ! overlaps inverse_of: has_part ! has_part +[Typedef] +id: preceded_by +name: preceded_by +def: "X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X)." [goc:cjm] +xref: BFO:0000062 +is_transitive: true + [Typedef] id: start name: start stage diff --git a/zfa-zfin.owl b/zfa-zfin.owl index 5a09da6..31afd6f 100644 --- a/zfa-zfin.owl +++ b/zfa-zfin.owl @@ -12,21 +12,22 @@ xmlns:terms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + + + ZFA description. Zebrafish Anatomy Ontology (ZFA) - OBO-Edit 2.3.1 - 08:03:2021 11:16 + OBO-Edit 2.3-beta5 + 29:11:2022 16:29 zebrafish_anatomical_ontology 1.2 - ceriv + zfinf CARO part_of NCBITaxon:7955 CL part_of NCBITaxon:7955 TAO part_of NCBITaxon:7955 VSAO part_of NCBITaxon:7955 - SVN version: $Revision: 1.100$ - 2022-03-15 + 2022-12-09 @@ -302,6 +303,46 @@ + + + + + X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X). + BFO:0000062 + zebrafish_anatomical_ontology + preceded_by + preceded_by + preceded_by + + + + + X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X). + goc:cjm + + + + + + + + + X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y). + RO:0002087 + zebrafish_anatomical_ontology + immediately_preceded_by + immediately_preceded_by + immediately_preceded_by + + + + + X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y). + goc:cjm + + + + @@ -7902,7 +7943,7 @@ Brain structure which is one of three parts of the cerebellum and is the entry point for a posterior cerebellar tract that carries cerebellar afferents from many brain stem nuclei. From Neuroanatomy of the Zebrafish Brain. TAO:0000188 cerebellar corpus - corpus cerebelli granular layer + corpus cerebelli granular layer corpus cerebellum zebrafish_anatomy ZFA:0000188 @@ -7919,7 +7960,7 @@ - corpus cerebelli granular layer + corpus cerebelli granular layer ZFIN:ZDB-PUB-961014-1280 @@ -10016,18 +10057,18 @@ ZFA:0000239 mesocoracoid bone - - - - Endochondral bone that articulates laterally with the medial surface of the cleithrum and ventro-medially with the scapula and coracoid. Mesocoracoid bone is a small, arch-like bone that develops from the mesocoracoid cartilage. Mesocoracoid bone is paired. - TAO:WD - mesocoracoid bones + + + + Endochondral bone that articulates laterally with the medial surface of the cleithrum and ventro-medially with the scapula and coracoid. Mesocoracoid bone is a small, arch-like bone that develops from the mesocoracoid cartilage. Mesocoracoid bone is paired. + TAO:WD + @@ -10873,7 +10914,7 @@ One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -11990,7 +12031,7 @@ Paired, deep caudal fin muscles that originate from the 30th vertebra and extend toward the dorsal base of the caudal fin where they insert broadly on fin rays. TAO:0000287 - flexor caudalis dorsalis superioris + flexor caudalis dorsalis superioris superior dorsal flexor zebrafish_anatomy CDS @@ -14260,7 +14301,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -16347,7 +16388,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -17365,7 +17406,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -18109,7 +18150,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:JCN 421-:189-198 + ZFIN:ZDB-PUB-000523-3 @@ -18437,7 +18478,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Portion of tissue, located on the upper jaw that defines the caudal extent of the labial cavity. The oral valves control the flow of water into the mouth during routine respiration. TAO:0000451 maxillary valve - upper semilunar valve + upper semilunar valve zebrafish_anatomy breathing valve buccal valve @@ -18454,7 +18495,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. - upper semilunar valve + upper semilunar valve ZFIN:ZDB-PUB-060921-12 @@ -18966,7 +19007,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -20382,7 +20423,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Mandibular muscle that inserts along the dorsolateral faces of the opercles. Responsible for opercular abduction. TAO:0000498 - dilatator opercula + dilatator opercula zebrafish_anatomy dilator opercula dilators operculi @@ -20940,7 +20981,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. LVII lobus facialis zebrafish_anatomy - tuberculum impar of Herrick + tuberculum impar of Herrick ZFA:0000512 facial lobe @@ -21473,7 +21514,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -22476,7 +22517,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000549 postemporal zebrafish_anatomy - post-temporal + post-temporal ZFA:0000549 posttemporal @@ -24217,7 +24258,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000588 auditory ganglion gVIII - octaval ganglion + octaval ganglion sag statoacoustic ganglia zebrafish_anatomy @@ -24683,7 +24724,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Multi-tissue structure that is part of the midbrain and develops from the alar plate. The torus semicircularis is located dorsal to the lateral tegmentum where it extends into the medial tectal ventricle and receives ascending sensory octavolateralis input. TAO:0000599 - semicircular torus + semicircular torus zebrafish_anatomy ZFA:0000599 torus semicircularis @@ -25036,7 +25077,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000608 transverse ventralis - transversus ventralis + transversus ventralis zebrafish_anatomy ZFA:0000608 ventral transverse @@ -33324,7 +33365,7 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - Portion of somite 16 that gives rise to body wall muscle masses. + Portion of somite 26 that gives rise to body wall muscle masses. TAO:0000807 zebrafish_anatomy ZFA:0000807 @@ -33334,7 +33375,7 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - Portion of somite 16 that gives rise to body wall muscle masses. + Portion of somite 26 that gives rise to body wall muscle masses. GOC:ymb ORCiD:0000-0002-9900-7880 ZFIN:ZDB-PUB-961014-576 @@ -38967,19 +39008,22 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) TAO:0000944 pll zebrafish_anatomy + midbody lateral line + midtrunk line ZFA:0000944 posterior lateral line - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 + ZFIN:ZDB-PUB-110811-14 @@ -53867,7 +53911,7 @@ The ciliary "body" does not contain processes or a cumferential band o tunica muscularis - http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html + http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html @@ -74287,7 +74331,7 @@ The epithelium exists before becoming folded into the rosette. - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) TAO:0005112 dorsal lateral lines zebrafish_anatomy @@ -74297,9 +74341,10 @@ The epithelium exists before becoming folded into the rosette. - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 + ZFIN:ZDB-PUB-070907-34 @@ -75128,7 +75173,7 @@ The epithelium exists before becoming folded into the rosette. tunica serosa - http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html + http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html @@ -99470,6 +99515,7 @@ This may be the same as CoBL. 2013-09-30T03:31:51Z zebrafish_anatomy ZFA:0005768 + trigeminal sensory neuron @@ -99548,6 +99594,7 @@ This may be the same as CoBL. 2013-11-05T11:05:25Z zebrafish_anatomy ZFA:0005770 + crypt neuron olfactory support cell @@ -99656,6 +99703,7 @@ This may be the same as CoBL. CL:0002546 zebrafish_anatomy ZFA:0005773 + embryonic blood vessel endothelial progenitor cell @@ -99735,6 +99783,7 @@ This may be the same as CoBL. CL:0007011 zebrafish_anatomy ZFA:0005775 + enteric neuron @@ -99774,6 +99823,7 @@ This may be the same as CoBL. CL:0011102 zebrafish_anatomy ZFA:0005776 + parasympathetic neuron @@ -99813,6 +99863,7 @@ This may be the same as CoBL. CL:0011103 zebrafish_anatomy ZFA:0005777 + sympathetic neuron @@ -99847,6 +99898,7 @@ This may be the same as CoBL. zebrafish_anatomy orexin secreting neuron ZFA:0005778 + hypocretin-secreting neuron @@ -100078,6 +100130,7 @@ This may be the same as CoBL. CL:0000737 zebrafish_anatomy ZFA:0005784 + striated muscle cell @@ -100186,6 +100239,7 @@ This may be the same as CoBL. 2014-03-25T09:31:29Z zebrafish_anatomy ZFA:0005786 + cleft cell @@ -103486,6 +103540,7 @@ this previously described vessel is connected to, or derived from, the FL networ 2016-01-12T10:33:08Z zebrafish_anatomy ZFA:0005865 + reticulospinal neuron @@ -103521,6 +103576,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy V ZFA:0005866 + vestibulospinal neuron @@ -103841,6 +103897,7 @@ this previously described vessel is connected to, or derived from, the FL networ 2016-03-23T01:14:15Z zebrafish_anatomy ZFA:0005874 + spiral neuron @@ -104009,6 +104066,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0000024 zebrafish_anatomy ZFA:0005878 + oogonia @@ -106592,7 +106650,19 @@ this previously described vessel is connected to, or derived from, the FL networ - Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes . + + + + + + + + + + + + + Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes . ceriv 2021-01-27T10:44:40Z zebrafish_anatomy @@ -106603,7 +106673,7 @@ this previously described vessel is connected to, or derived from, the FL networ - Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes . + Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes . GOC:cvs ORCID:0000-0002-1009-339X ORCID:0000-0002-2244-7917 @@ -106612,6 +106682,38 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + + + + + + + + + + + + Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance. + ceriv + 2021-03-25T15:52:05Z + zebrafish_anatomy + ZFA:0005943 + perivitelline fluid + + + + + Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance. + ZFIN:ZDB-PUB-200910-2 + + + + @@ -106654,6 +106756,521 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + + + + + + + + + + + + Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus. + 2021-07-09T09:06:25Z + red-sensitive cone cell + zebrafish_anatomy + unequal double cone cell + ZFA:0005945 + + long double cone cell + + + + + Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + red-sensitive cone cell + ZFIN:ZDB-PUB-990520-1 + + + + + unequal double cone cell + ZFIN:ZDB-PUB-961014-677 + + + + + + + + + + + + + + + + + + + + + Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus. + ceriv + 2021-07-09T10:53:10Z + green-sensitive cone + zebrafish_anatomy + unequal double cone cell + ZFA:0005946 + + short double cone cell + + + + + Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + green-sensitive cone + ZFIN:ZDB-PUB-990520-1 + + + + + unequal double cone cell + ZFIN:ZDB-PUB-961014-677 + + + + + + + + + + + + + + + + + + + + + Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells. + ceriv + 2021-07-09T11:01:04Z + blue-sensitive cone cell + zebrafish_anatomy + ZFA:0005947 + + long single cone cell + + + + + Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + blue-sensitive cone cell + ZFIN:ZDB-PUB-990520-1 + + + + + + + + + + + + + + + + + + + + + Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs. + ceriv + 2021-07-09T11:10:25Z + UV-sensitive cone + ultraviolet-sensitive cone + zebrafish_anatomy + ZFA:0005948 + + short single cone cell + + + + + Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + UV-sensitive cone + ZFIN:ZDB-PUB-990520-1 + + + + + + + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the heart. + 2021-08-13T11:47:35Z + zebrafish_anatomy + ZFA:0005949 + heart lymph vessel + + + + + Lymph vessel located in the heart. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition. + ceriv + 2021-08-13T11:53:55Z + outflow tract lymph vessel + zebrafish_anatomy + ZFA:0005950 + bulbus arteriosus lymph vessel + + + + + Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels. + ceriv + 2021-08-13T11:58:24Z + zebrafish_anatomy + ZFA:0005951 + cardiac ventricle lymph vessel + + + + + Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + Lymphatic system of the heart. + ceriv + 2021-08-13T12:23:44Z + zebrafish_anatomy + ZFA:0005952 + heart lymphatic system + + + + + Lymphatic system of the heart. + GOC:CVS + ORCID:0000-0002-2244-7917 + + + + + + + + + + + + + + + + + + + + + Capillary plexus that is located in the heart. + ceriv + 2021-08-13T12:26:17Z + zebrafish_anatomy + ZFA:0005953 + coronary capillary plexus + + + + + Capillary plexus that is located in the heart. + GOC:cvs + ORCID:0000-0002-2244-7917 + + + + + + + + + + + + + + + + + + + + + + + + + + + Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network. + ceriv + 2021-08-13T12:30:04Z + isolated lymph endothelial cells + zebrafish_anatomy + ZFA:0005954 + cardiac lymphatic endothelial cluster + + + + + Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage. + ceriv + 2021-08-13T12:53:02Z + zebrafish_anatomy + ZFA:0005955 + lymphatic endothelial cluster + + + + + Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + A stem cell that can give rise to cell types of the germ-line. + ceriv + 2021-08-13T13:44:39Z + CL:0000014 + zebrafish_anatomy + ZFA:0005956 + + germline stem cell + + + + + A stem cell that can give rise to cell types of the germ-line. + ORCID:0000-0002-4142-7153 + + + + + + + + + + + + + + + + + + + + + A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. + ceriv + 2021-08-13T13:47:16Z + CL:0000034 + zebrafish_anatomy + ZFA:0005957 + + stem cell + + + + + A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. + GOC:tfm + + + + @@ -110281,6 +110898,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory neural crest cells zebrafish_anatomy ZFA:0007084 + premigratory neural crest cell @@ -110373,6 +110991,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory neural crest cells zebrafish_anatomy ZFA:0007086 + migratory neural crest cell @@ -110487,6 +111106,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0002321 zebrafish_anatomy ZFA:0007089 + embryonic cell @@ -110527,6 +111147,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory cranial neural crest cells zebrafish_anatomy ZFA:0007090 + premigratory cranial neural crest cell @@ -110580,6 +111201,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory cranial neural crest cells zebrafish_anatomy ZFA:0007091 + migratory cranial neural crest cell @@ -110701,6 +111323,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory trunk neural crest cells zebrafish_anatomy ZFA:0007094 + premigratory trunk neural crest cell @@ -110754,6 +111377,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory trunk neural crest cells zebrafish_anatomy ZFA:0007095 + migratory trunk neural crest cell @@ -111607,6 +112231,7 @@ this previously described vessel is connected to, or derived from, the FL networ CSF-cNs zebrafish_anatomy ZFA:0007120 + cerebrospinal fluid contacting neuron @@ -111657,6 +112282,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy KA 2 ZFA:0007121 + ventral cerebrospinal fluid contacting neuron @@ -111706,6 +112332,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy <new synonym> ZFA:0007122 + epidermal stem cell @@ -111746,6 +112373,7 @@ this previously described vessel is connected to, or derived from, the FL networ ionocyte progenitor cells zebrafish_anatomy ZFA:0007123 + ionocyte progenitor cell @@ -111793,6 +112421,7 @@ this previously described vessel is connected to, or derived from, the FL networ keratinocyte progenitor cells zebrafish_anatomy ZFA:0007124 + keratinocyte progenitor cell @@ -123872,7 +124501,7 @@ this previously described vessel is connected to, or derived from, the FL networ - + @@ -123899,7 +124528,7 @@ this previously described vessel is connected to, or derived from, the FL networ A stem cell that can give rise to cell types of the body other than those of the germ-line. - GO:CJM + GO:cjm @@ -127463,6 +128092,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0011004 zebrafish_anatomy ZFA:0009401 + lens fiber cell @@ -127575,11 +128205,12 @@ this previously described vessel is connected to, or derived from, the FL networ Endothelial cells that surround the heart valve extracellular matrix. ceriv 2020-12-08T09:48:24Z + heart valve endocardial cell zebrafish_anatomy VEC ZFA:0009404 - heart valve endothelial cells + heart valve endothelial cell @@ -127589,6 +128220,12 @@ this previously described vessel is connected to, or derived from, the FL networ ORCID:0000-0002-2244-7917 ZFIN:ZDB-PUB-191202-2 + + + + heart valve endocardial cell + ZFIN:ZDB-PUB-200221-32 + @@ -127616,7 +128253,7 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2430 zebrafish_stages ZFS:0000000 - Unknown + unknown @@ -127629,7 +128266,7 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2431 zebrafish_stages ZFS:0000001 - Zygote:1-cell + zygote:1-cell @@ -127638,11 +128275,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-15 ZFIN:ZDB-TERM-100331-2432 zebrafish_stages ZFS:0000002 - Cleavage:2-cell + cleavage:2-cell @@ -127651,11 +128294,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-11 ZFIN:ZDB-TERM-100331-2433 zebrafish_stages ZFS:0000003 - Cleavage:4-cell + cleavage:4-cell @@ -127664,11 +128313,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-33 ZFIN:ZDB-TERM-100331-2434 zebrafish_stages ZFS:0000004 - Cleavage:8-cell + cleavage:8-cell @@ -127677,11 +128332,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-20 ZFIN:ZDB-TERM-100331-2435 zebrafish_stages ZFS:0000005 - Cleavage:16-cell + cleavage:16-cell @@ -127690,11 +128351,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-25 ZFIN:ZDB-TERM-100331-2436 zebrafish_stages ZFS:0000006 - Cleavage:32-cell + cleavage:32-cell @@ -127703,11 +128370,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-28 ZFIN:ZDB-TERM-100331-2437 zebrafish_stages ZFS:0000007 - Cleavage:64-cell + cleavage:64-cell @@ -127716,11 +128389,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-7 ZFIN:ZDB-TERM-100331-2438 zebrafish_stages ZFS:0000008 - Blastula:128-cell + blastula:128-cell @@ -127729,11 +128408,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-1 ZFIN:ZDB-TERM-100331-2439 zebrafish_stages ZFS:0000009 - Blastula:256-cell + blastula:256-cell @@ -127742,11 +128427,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-14 ZFIN:ZDB-TERM-100331-2440 zebrafish_stages ZFS:0000010 - Blastula:512-cell + blastula:512-cell @@ -127755,11 +128446,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-22 ZFIN:ZDB-TERM-100331-2441 zebrafish_stages ZFS:0000011 - Blastula:1k-cell + blastula:1k-cell @@ -127768,11 +128465,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-27 ZFIN:ZDB-TERM-100331-2442 zebrafish_stages ZFS:0000012 - Blastula:High + blastula:high @@ -127781,11 +128484,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-24 ZFIN:ZDB-TERM-100331-2443 zebrafish_stages ZFS:0000013 - Blastula:Oblong + blastula:oblong @@ -127794,11 +128503,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-21 ZFIN:ZDB-TERM-100331-2444 zebrafish_stages ZFS:0000014 - Blastula:Sphere + blastula:sphere @@ -127807,11 +128522,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-19 ZFIN:ZDB-TERM-100331-2445 zebrafish_stages ZFS:0000015 - Blastula:Dome + blastula:dome @@ -127820,11 +128541,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-17 ZFIN:ZDB-TERM-100331-2446 zebrafish_stages ZFS:0000016 - Blastula:30%-epiboly + blastula:30%-epiboly @@ -127833,11 +128560,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-6 ZFIN:ZDB-TERM-100331-2447 zebrafish_stages ZFS:0000017 - Gastrula:50%-epiboly + gastrula:50%-epiboly @@ -127846,11 +128579,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-3 ZFIN:ZDB-TERM-100331-2448 zebrafish_stages ZFS:0000018 - Gastrula:Germ-ring + gastrula:germ-ring @@ -127859,11 +128598,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-2 ZFIN:ZDB-TERM-100331-2449 zebrafish_stages ZFS:0000019 - Gastrula:Shield + gastrula:shield @@ -127872,11 +128617,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-18 ZFIN:ZDB-TERM-100331-2450 zebrafish_stages ZFS:0000020 - Gastrula:75%-epiboly + gastrula:75%-epiboly @@ -127885,11 +128636,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-29 ZFIN:ZDB-TERM-100331-2451 zebrafish_stages ZFS:0000021 - Gastrula:90%-epiboly + gastrula:90%-epiboly @@ -127898,11 +128655,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-12 ZFIN:ZDB-TERM-100331-2452 zebrafish_stages ZFS:0000022 - Gastrula:Bud + gastrula:bud @@ -127911,11 +128674,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-23 ZFIN:ZDB-TERM-100331-2453 zebrafish_stages ZFS:0000023 - Segmentation:1-4 somites + segmentation:1-4 somites @@ -127924,11 +128693,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-5 ZFIN:ZDB-TERM-100331-2454 zebrafish_stages ZFS:0000024 - Segmentation:5-9 somites + segmentation:5-9 somites @@ -127937,11 +128712,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-020626-1 ZFIN:ZDB-TERM-100331-2455 zebrafish_stages ZFS:0000025 - Segmentation:10-13 somites + segmentation:10-13 somites @@ -127950,11 +128731,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-30 ZFIN:ZDB-TERM-100331-2456 zebrafish_stages ZFS:0000026 - Segmentation:14-19 somites + segmentation:14-19 somites @@ -127963,11 +128750,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-16 ZFIN:ZDB-TERM-100331-2457 zebrafish_stages ZFS:0000027 - Segmentation:20-25 somites + segmentation:20-25 somites @@ -127976,11 +128769,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-34 ZFIN:ZDB-TERM-100331-2458 zebrafish_stages ZFS:0000028 - Segmentation:26+ somites + segmentation:26+ somites @@ -127989,11 +128788,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-10 ZFIN:ZDB-TERM-100331-2439 zebrafish_stages ZFS:0000029 - Pharyngula:Prim-5 + pharyngula:prim-5 @@ -128002,11 +128807,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-32 ZFIN:ZDB-TERM-100331-2460 zebrafish_stages ZFS:0000030 - Pharyngula:Prim-15 + pharyngula:prim-15 @@ -128015,11 +128826,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-13 ZFIN:ZDB-TERM-100331-2461 zebrafish_stages ZFS:0000031 - Pharyngula:Prim-25 + pharyngula:prim-25 @@ -128028,11 +128845,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-31 ZFIN:ZDB-TERM-100331-2462 zebrafish_stages ZFS:0000032 - Pharyngula:High-pec + pharyngula:high-pec @@ -128041,11 +128864,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-9 ZFIN:ZDB-TERM-100331-2463 zebrafish_stages ZFS:0000033 - Hatching:Long-pec + hatching:long-pec @@ -128054,11 +128883,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-26 ZFIN:ZDB-TERM-100331-2464 zebrafish_stages ZFS:0000034 - Hatching:Pec-fin + hatching:pec-fin @@ -128067,11 +128902,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-8 ZFIN:ZDB-TERM-100331-2465 zebrafish_stages ZFS:0000035 - Larval:Protruding-mouth + larval:protruding-mouth @@ -128080,11 +128921,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-35 ZFIN:ZDB-TERM-100331-2466 zebrafish_stages ZFS:0000036 - Larval:Day 4 + larval:day 4 @@ -128093,11 +128940,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-36 ZFIN:ZDB-TERM-100331-2467 zebrafish_stages ZFS:0000037 - Larval:Day 5 + larval:day 5 @@ -128106,11 +128959,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-37 ZFIN:ZDB-TERM-100331-2468 zebrafish_stages ZFS:0000038 - Larval:Day 6 + larval:day 6 @@ -128119,11 +128978,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-47 ZFIN:ZDB-TERM-100331-2469 zebrafish_stages ZFS:0000039 - Larval:Days 7-13 + larval:days 7-13 @@ -128132,11 +128997,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-48 ZFIN:ZDB-TERM-100331-2470 zebrafish_stages ZFS:0000040 - Larval:Days 14-20 + larval:days 14-20 @@ -128145,11 +129016,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-49 ZFIN:ZDB-TERM-100331-2471 zebrafish_stages ZFS:0000041 - Larval:Days 21-29 + larval:days 21-29 @@ -128158,11 +129035,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-51 ZFIN:ZDB-TERM-100331-2472 zebrafish_stages ZFS:0000042 - Juvenile:Days 30-44 + juvenile:days 30-44 @@ -128171,11 +129054,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-52 ZFIN:ZDB-TERM-100331-2473 zebrafish_stages ZFS:0000043 - Juvenile:Days 45-89 + juvenile:days 45-89 @@ -128188,7 +129077,139 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2474 zebrafish_stages ZFS:0000044 - Adult + adult + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000045 + blastula + + + + + + + + + zebrafish_stages + ZFS:0000046 + cleavage + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000047 + gastrula + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000048 + larva + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000049 + segmentation + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000050 + pharyngula + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000051 + juvenile + + + + + + + + + + + + + + + yvonne + 2014-11-05T08:33:09Z + zebrafish_stages + ZFS:0007000 + hatching @@ -128198,7 +129219,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_stages ZFS:0100000 - Stages + zebrafish stage diff --git a/zfa.json b/zfa.json index 75e7165..714760c 100644 --- a/zfa.json +++ b/zfa.json @@ -8,6 +8,11 @@ "pred": "inverseOf", "sub": "http://purl.obolibrary.org/obo/BFO_0000050" }, + { + "obj": "http://purl.obolibrary.org/obo/BFO_0000062", + "pred": "subPropertyOf", + "sub": "http://purl.obolibrary.org/obo/RO_0002087" + }, { "obj": "http://purl.obolibrary.org/obo/RO_0002131", "pred": "subPropertyOf", @@ -398,6 +403,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005075" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000009", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000010", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -628,6 +638,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0000329" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000020", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005943" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000022", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -3608,6 +3623,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005068" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000173", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000175", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -5238,6 +5258,11 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005658" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0000385", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005955" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0000386", "pred": "is_a", @@ -24503,6 +24528,16 @@ "pred": "http://purl.obolibrary.org/obo/BFO_0000050", "sub": "http://purl.obolibrary.org/obo/ZFA_0005814" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005811", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005952" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005811", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005953" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0005818", "pred": "http://purl.obolibrary.org/obo/BFO_0000050", @@ -24833,6 +24868,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005862" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005844", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0005844", "pred": "is_a", @@ -25353,6 +25393,41 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0009181" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005949", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005949", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005952", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005952", + "pred": "http://purl.obolibrary.org/obo/BFO_0000050", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005955", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005957", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005956" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0005957", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0006000", "pred": "http://purl.obolibrary.org/obo/RO_0002202", @@ -26333,6 +26408,11 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005944" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", "pred": "is_a", @@ -26668,11 +26748,6 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0009306" }, - { - "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", - "pred": "is_a", - "sub": "http://purl.obolibrary.org/obo/ZFA_0009307" - }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009000", "pred": "is_a", @@ -29113,6 +29188,26 @@ "pred": "is_a", "sub": "http://purl.obolibrary.org/obo/ZFA_0005929" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005947" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFA_0009262", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005948" + }, { "obj": "http://purl.obolibrary.org/obo/ZFA_0009265", "pred": "http://purl.obolibrary.org/obo/RO_0002202", @@ -35708,6 +35803,46 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005941" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005942" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005947" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005948" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005952" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005953" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005955" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005956" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005957" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000000", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -38628,6 +38763,11 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005772" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000001", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005943" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000001", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -44593,6 +44733,11 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0005738" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000032", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005943" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -45058,6 +45203,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005926" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000033", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -48818,6 +48973,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005800" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005950" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000041", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -49108,6 +49273,16 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002496", "sub": "http://purl.obolibrary.org/obo/ZFA_0005769" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005951" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", + "pred": "http://purl.obolibrary.org/obo/RO_0002496", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005954" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000043", "pred": "http://purl.obolibrary.org/obo/RO_0002496", @@ -58323,11 +58498,81 @@ "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0005941" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005942" + }, { "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", "pred": "http://purl.obolibrary.org/obo/RO_0002497", "sub": "http://purl.obolibrary.org/obo/ZFA_0005944" }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005945" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005946" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005947" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005948" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": "http://purl.obolibrary.org/obo/RO_0002497", + "sub": "http://purl.obolibrary.org/obo/ZFA_0005949" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0000044", + "pred": 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"obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000049" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000050" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0000051" + }, + { + "obj": "http://purl.obolibrary.org/obo/ZFS_0100000", + "pred": "is_a", + "sub": "http://purl.obolibrary.org/obo/ZFS_0007000" } ], "equivalentNodesSets": [], @@ -60684,6 +61214,14 @@ "logicalDefinitionAxioms": [], "meta": { "basicPropertyValues": [ + { + "pred": "http://purl.obolibrary.org/obo/IAO_0000700", + "val": "http://purl.obolibrary.org/obo/ZFA_0100000" + }, + { + "pred": "http://purl.obolibrary.org/obo/IAO_0000700", + "val": "http://purl.obolibrary.org/obo/ZFS_0100000" + }, { "pred": "http://purl.org/dc/elements/1.1/description", "val": "ZFA description." @@ -60698,11 +61236,11 @@ }, { "pred": "http://www.geneontology.org/formats/oboInOwl#auto-generated-by", - "val": "OBO-Edit 2.3.1" + "val": "OBO-Edit 2.3-beta5" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#date", - "val": "08:03:2021 11:16" + "val": "29:11:2022 16:29" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#default-namespace", @@ -60714,7 +61252,7 @@ }, { "pred": "http://www.geneontology.org/formats/oboInOwl#saved-by", - "val": "ceriv" + "val": "zfinf" }, { "pred": "http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-genus-differentia", @@ -60732,17 +61270,13 @@ "pred": "http://www.geneontology.org/formats/oboInOwl#treat-xrefs-as-genus-differentia", "val": "VSAO part_of NCBITaxon:7955" }, - { - "pred": "http://www.w3.org/2000/01/rdf-schema#comment", - "val": "SVN version: $Revision: 1.100$" - }, { "pred": "http://www.w3.org/2002/07/owl#versionInfo", - "val": "2022-03-15" + "val": "2022-12-09" } ], "subsets": [], - "version": "http://purl.obolibrary.org/obo/zfa/releases/2022-03-15/zfa.json", + "version": "http://purl.obolibrary.org/obo/zfa/releases/2022-12-09/zfa.json", "xrefs": [] }, "nodes": [ @@ -60790,6 +61324,62 @@ }, "type": "PROPERTY" }, + { + "id": "http://purl.obolibrary.org/obo/BFO_0000062", + "lbl": "preceded_by", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomical_ontology" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val": "preceded_by" + } + ], + "definition": { + "val": "X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X).", + "xrefs": [ + "goc:cjm" + ] + }, + "xrefs": [ + { + "val": "BFO:0000062" + } + ] + }, + "type": "PROPERTY" + }, + { + "id": "http://purl.obolibrary.org/obo/RO_0002087", + "lbl": "immediately_preceded_by", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomical_ontology" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#shorthand", + "val": "immediately_preceded_by" + } + ], + "definition": { + "val": "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y).", + "xrefs": [ + "goc:cjm" + ] + }, + "xrefs": [ + { + "val": "RO:0002087" + } + ] + }, + "type": "PROPERTY" + }, { "id": "http://purl.obolibrary.org/obo/RO_0002131", "lbl": "overlaps", @@ -66860,7 +67450,7 @@ }, { "pred": "hasExactSynonym", - "val": "corpus cerebelli granular layer ", + "val": "corpus cerebelli granular layer", "xrefs": [ "ZFIN:ZDB-PUB-961014-1280" ] @@ -69197,7 +69787,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -70077,7 +70667,7 @@ "synonyms": [ { "pred": "hasExactSynonym", - "val": "flexor caudalis dorsalis superioris ", + "val": "flexor caudalis dorsalis superioris", "xrefs": [] }, { @@ -71955,7 +72545,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -73584,7 +74174,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -74344,7 +74934,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -74939,7 +75529,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:JCN 421-:189-198" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -75223,7 +75813,7 @@ }, { "pred": "hasExactSynonym", - "val": "upper semilunar valve ", + "val": "upper semilunar valve", "xrefs": [ "ZFIN:ZDB-PUB-060921-12" ] @@ -75653,7 +76243,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -76721,7 +77311,7 @@ }, { "pred": "hasExactSynonym", - "val": " dilatator opercula", + "val": "dilatator opercula", "xrefs": [] }, { @@ -77202,7 +77792,7 @@ }, { "pred": "hasRelatedSynonym", - "val": "tuberculum impar of Herrick ", + "val": "tuberculum impar of Herrick", "xrefs": [] } ], @@ -77587,7 +78177,7 @@ "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", - "ZFIN:" + "ZFIN:ZDB-PUB-000523-3" ] }, "synonyms": [ @@ -78422,7 +79012,7 @@ }, { "pred": "hasRelatedSynonym", - "val": "post-temporal ", + "val": "post-temporal", "xrefs": [] } ], @@ -79695,7 +80285,7 @@ }, { "pred": "hasExactSynonym", - "val": "octaval ganglion ", + "val": "octaval ganglion", "xrefs": [] }, { @@ -80016,7 +80606,7 @@ "synonyms": [ { "pred": "hasExactSynonym", - "val": "semicircular torus ", + "val": "semicircular torus", "xrefs": [] } ], @@ -80303,7 +80893,7 @@ }, { "pred": "hasExactSynonym", - "val": "transversus ventralis ", + "val": "transversus ventralis", "xrefs": [] } ], @@ -86629,7 +87219,7 @@ } ], "definition": { - "val": "Portion of somite 16 that gives rise to body wall muscle masses.", + "val": "Portion of somite 26 that gives rise to body wall muscle masses.", "xrefs": [ "GOC:ymb", "ORCiD:0000-0002-9900-7880", @@ -90899,10 +91489,11 @@ } ], "definition": { - "val": "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", + "val": "One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", "xrefs": [ "GOC:ymb", - "ORCiD:0000-0002-9900-7880" + "ORCiD:0000-0002-9900-7880", + "ZFIN:ZDB-PUB-110811-14" ] }, "synonyms": [ @@ -90910,6 +91501,16 @@ "pred": "hasExactSynonym", "val": "pll", "xrefs": [] + }, + { + "pred": "hasRelatedSynonym", + "val": "midbody lateral line", + "xrefs": [] + }, + { + "pred": "hasRelatedSynonym", + "val": "midtrunk line", + "xrefs": [] } ], "xrefs": [ @@ -102193,7 +102794,7 @@ "pred": "hasRelatedSynonym", "val": "tunica muscularis", "xrefs": [ - "http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" + "http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" ] } ], @@ -118512,10 +119113,11 @@ } ], "definition": { - "val": "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", + "val": "One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)", "xrefs": [ "GOC:ymb", - "ORCiD:0000-0002-9900-7880" + "ORCiD:0000-0002-9900-7880", + "ZFIN:ZDB-PUB-070907-34" ] }, "synonyms": [ @@ -119128,7 +119730,7 @@ "pred": "hasRelatedSynonym", "val": "tunica serosa", "xrefs": [ - "http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" + "http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html" ] } ], @@ -141775,7 +142377,10 @@ "xrefs": [ "ZFIN:ZDB-PUB-120106-15" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -141839,7 +142444,10 @@ "ORCiD:0000-0002-2244-7917", "ZFIN:ZDB-PUB-060724-7" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -141934,6 +142542,9 @@ "GOC:tjm" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0002546" @@ -141995,6 +142606,9 @@ "CL:MAH" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0007011" @@ -142027,6 +142641,9 @@ "ISBN:0080923437" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011102" @@ -142059,6 +142676,9 @@ "ISBN:0080923437" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011103" @@ -142091,6 +142711,9 @@ "PMID:23848055" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -142274,6 +142897,9 @@ "ISBN:0721662544" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0000737" @@ -142343,7 +142969,10 @@ "ORCiD:0000-0002-2244-7917", "ZFIN:ZDB-PUB-961014-195" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -145057,7 +145686,10 @@ "ORCID:0000-0002-2244-7917", "ZFIN:ZDB-PUB-961014-594" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -145085,6 +145717,9 @@ "ZFIN:ZDB-PUB-961014-572" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -145348,7 +145983,10 @@ "ZFIN:ZDB-PUB-110110-13", "ZFIN:ZDB-PUB-150512-4" ] - } + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ] }, "type": "CLASS" }, @@ -145492,6 +146130,9 @@ "ZFIN:ZDB-PUB-120718-30" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0000024" @@ -147712,7 +148353,7 @@ } ], "definition": { - "val": "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes .", + "val": "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes .", "xrefs": [ "GOC:cvs", "ORCID:0000-0002-1009-339X", @@ -147726,6 +148367,33 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005943", + "lbl": "perivitelline fluid", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-03-25T15:52:05Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance.", + "xrefs": [ + "ZFIN:ZDB-PUB-200910-2" + ] + } + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFA_0005944", "lbl": "mural cell", @@ -147763,6 +148431,470 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005945", + "lbl": "long double cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T09:06:25Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "red-sensitive cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasRelatedSynonym", + "val": "unequal double cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-961014-677" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005946", + "lbl": "short double cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T10:53:10Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "green-sensitive cone", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasRelatedSynonym", + "val": "unequal double cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-961014-677" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005947", + "lbl": "long single cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T11:01:04Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "blue-sensitive cone cell", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005948", + "lbl": "short single cone cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-07-09T11:10:25Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs.", + "xrefs": [ + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-961014-677", + "ZFIN:ZDB-PUB-990520-1", + "goc:cvs" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "UV-sensitive cone", + "xrefs": [ + "ZFIN:ZDB-PUB-990520-1" + ] + }, + { + "pred": "hasExactSynonym", + "val": "ultraviolet-sensitive cone", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005949", + "lbl": "heart lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:47:35Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the heart.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005950", + "lbl": "bulbus arteriosus lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:53:55Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + }, + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "outflow tract lymph vessel", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005951", + "lbl": "cardiac ventricle lymph vessel", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T11:58:24Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005952", + "lbl": "heart lymphatic system", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:23:44Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Lymphatic system of the heart.", + "xrefs": [ + "GOC:CVS", + "ORCID:0000-0002-2244-7917" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005953", + "lbl": "coronary capillary plexus", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:26:17Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Capillary plexus that is located in the heart.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005954", + "lbl": "cardiac lymphatic endothelial cluster", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:30:04Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + }, + "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "isolated lymph endothelial cells", + "xrefs": [] + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005955", + "lbl": "lymphatic endothelial cluster", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T12:53:02Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage.", + "xrefs": [ + "GOC:cvs", + "ORCID:0000-0002-2244-7917", + "ZFIN:ZDB-PUB-191110-11" + ] + } + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005956", + "lbl": "germline stem cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T13:44:39Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "A stem cell that can give rise to cell types of the germ-line.", + "xrefs": [ + "ORCID:0000-0002-4142-7153" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "xrefs": [ + { + "val": "CL:0000014" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFA_0005957", + "lbl": "stem cell", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "ceriv" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2021-08-13T13:47:16Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_anatomy" + } + ], + "definition": { + "val": "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.", + "xrefs": [ + "GOC:tfm" + ] + }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], + "xrefs": [ + { + "val": "CL:0000034" + } + ] + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFA_0006000", "lbl": "intermediate hypothalamus", @@ -150516,6 +151648,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150585,6 +151720,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150681,6 +151819,9 @@ "CL:curator" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0002321" @@ -150714,6 +151855,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150750,6 +151894,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150847,6 +151994,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -150883,6 +152033,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151621,6 +152774,9 @@ "ZFIN:ZDB-PUB-170409-2" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151667,6 +152823,9 @@ "ZFIN:ZDB-PUB-170409-2" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151717,6 +152876,9 @@ "ORCiD:0000-0002-9900-7880" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasRelatedSynonym", @@ -151758,6 +152920,9 @@ "ZFIN:ZDB-PUB-190402-19" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -151795,6 +152960,9 @@ "ZFIN:ZDB-PUB-190402-19" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "synonyms": [ { "pred": "hasExactSynonym", @@ -163076,7 +164244,7 @@ "definition": { "val": "A stem cell that can give rise to cell types of the body other than those of the germ-line.", "xrefs": [ - "GO:CJM" + "GO:cjm" ] }, "subsets": [ @@ -166608,6 +167776,9 @@ "GOC:nv" ] }, + "subsets": [ + "http://purl.obolibrary.org/obo/zfa#cell_slim" + ], "xrefs": [ { "val": "CL:0011004" @@ -166694,7 +167865,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFA_0009404", - "lbl": "heart valve endothelial cells", + "lbl": "heart valve endothelial cell", "meta": { "basicPropertyValues": [ { @@ -166722,6 +167893,13 @@ "http://purl.obolibrary.org/obo/zfa#cell_slim" ], "synonyms": [ + { + "pred": "hasExactSynonym", + "val": "heart valve endocardial cell", + "xrefs": [ + "ZFIN:ZDB-PUB-200221-32" + ] + }, { "pred": "hasRelatedSynonym", "val": "VEC", @@ -166748,7 +167926,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000000", - "lbl": "Unknown", + "lbl": "unknown", "meta": { "basicPropertyValues": [ { @@ -166769,7 +167947,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000001", - "lbl": "Zygote:1-cell", + "lbl": "zygote:1-cell", "meta": { "basicPropertyValues": [ { @@ -166790,7 +167968,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000002", - "lbl": "Cleavage:2-cell", + "lbl": "cleavage:2-cell", "meta": { "basicPropertyValues": [ { @@ -166811,7 +167989,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000003", - "lbl": "Cleavage:4-cell", + "lbl": "cleavage:4-cell", "meta": { "basicPropertyValues": [ { @@ -166832,7 +168010,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000004", - "lbl": "Cleavage:8-cell", + "lbl": "cleavage:8-cell", "meta": { "basicPropertyValues": [ { @@ -166853,7 +168031,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000005", - "lbl": "Cleavage:16-cell", + "lbl": "cleavage:16-cell", "meta": { "basicPropertyValues": [ { @@ -166874,7 +168052,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000006", - "lbl": "Cleavage:32-cell", + "lbl": "cleavage:32-cell", "meta": { "basicPropertyValues": [ { @@ -166895,7 +168073,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000007", - "lbl": "Cleavage:64-cell", + "lbl": "cleavage:64-cell", "meta": { "basicPropertyValues": [ { @@ -166916,7 +168094,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000008", - "lbl": "Blastula:128-cell", + "lbl": "blastula:128-cell", "meta": { "basicPropertyValues": [ { @@ -166937,7 +168115,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000009", - "lbl": "Blastula:256-cell", + "lbl": "blastula:256-cell", "meta": { "basicPropertyValues": [ { @@ -166958,7 +168136,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000010", - "lbl": "Blastula:512-cell", + "lbl": "blastula:512-cell", "meta": { "basicPropertyValues": [ { @@ -166979,7 +168157,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000011", - "lbl": "Blastula:1k-cell", + "lbl": "blastula:1k-cell", "meta": { "basicPropertyValues": [ { @@ -167000,7 +168178,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000012", - "lbl": "Blastula:High", + "lbl": "blastula:high", "meta": { "basicPropertyValues": [ { @@ -167021,7 +168199,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000013", - "lbl": "Blastula:Oblong", + "lbl": "blastula:oblong", "meta": { "basicPropertyValues": [ { @@ -167042,7 +168220,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000014", - "lbl": "Blastula:Sphere", + "lbl": "blastula:sphere", "meta": { "basicPropertyValues": [ { @@ -167063,7 +168241,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000015", - "lbl": "Blastula:Dome", + "lbl": "blastula:dome", "meta": { "basicPropertyValues": [ { @@ -167084,7 +168262,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000016", - "lbl": "Blastula:30%-epiboly", + "lbl": "blastula:30%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167105,7 +168283,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000017", - "lbl": "Gastrula:50%-epiboly", + "lbl": "gastrula:50%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167126,7 +168304,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000018", - "lbl": "Gastrula:Germ-ring", + "lbl": "gastrula:germ-ring", "meta": { "basicPropertyValues": [ { @@ -167147,7 +168325,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000019", - "lbl": "Gastrula:Shield", + "lbl": "gastrula:shield", "meta": { "basicPropertyValues": [ { @@ -167168,7 +168346,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000020", - "lbl": "Gastrula:75%-epiboly", + "lbl": "gastrula:75%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167189,7 +168367,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000021", - "lbl": "Gastrula:90%-epiboly", + "lbl": "gastrula:90%-epiboly", "meta": { "basicPropertyValues": [ { @@ -167210,7 +168388,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000022", - "lbl": "Gastrula:Bud", + "lbl": "gastrula:bud", "meta": { "basicPropertyValues": [ { @@ -167231,7 +168409,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000023", - "lbl": "Segmentation:1-4 somites", + "lbl": "segmentation:1-4 somites", "meta": { "basicPropertyValues": [ { @@ -167252,7 +168430,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000024", - "lbl": "Segmentation:5-9 somites", + "lbl": "segmentation:5-9 somites", "meta": { "basicPropertyValues": [ { @@ -167273,7 +168451,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000025", - "lbl": "Segmentation:10-13 somites", + "lbl": "segmentation:10-13 somites", "meta": { "basicPropertyValues": [ { @@ -167294,7 +168472,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000026", - "lbl": "Segmentation:14-19 somites", + "lbl": "segmentation:14-19 somites", "meta": { "basicPropertyValues": [ { @@ -167315,7 +168493,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000027", - "lbl": "Segmentation:20-25 somites", + "lbl": "segmentation:20-25 somites", "meta": { "basicPropertyValues": [ { @@ -167336,7 +168514,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000028", - "lbl": "Segmentation:26+ somites", + "lbl": "segmentation:26+ somites", "meta": { "basicPropertyValues": [ { @@ -167357,7 +168535,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000029", - "lbl": "Pharyngula:Prim-5", + "lbl": "pharyngula:prim-5", "meta": { "basicPropertyValues": [ { @@ -167378,7 +168556,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000030", - "lbl": "Pharyngula:Prim-15", + "lbl": "pharyngula:prim-15", "meta": { "basicPropertyValues": [ { @@ -167399,7 +168577,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000031", - "lbl": "Pharyngula:Prim-25", + "lbl": "pharyngula:prim-25", "meta": { "basicPropertyValues": [ { @@ -167420,7 +168598,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000032", - "lbl": "Pharyngula:High-pec", + "lbl": "pharyngula:high-pec", "meta": { "basicPropertyValues": [ { @@ -167441,7 +168619,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000033", - "lbl": "Hatching:Long-pec", + "lbl": "hatching:long-pec", "meta": { "basicPropertyValues": [ { @@ -167462,7 +168640,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000034", - "lbl": "Hatching:Pec-fin", + "lbl": "hatching:pec-fin", "meta": { "basicPropertyValues": [ { @@ -167483,7 +168661,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000035", - "lbl": "Larval:Protruding-mouth", + "lbl": "larval:protruding-mouth", "meta": { "basicPropertyValues": [ { @@ -167504,7 +168682,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000036", - "lbl": "Larval:Day 4", + "lbl": "larval:day 4", "meta": { "basicPropertyValues": [ { @@ -167525,7 +168703,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000037", - "lbl": "Larval:Day 5", + "lbl": "larval:day 5", "meta": { "basicPropertyValues": [ { @@ -167546,7 +168724,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000038", - "lbl": "Larval:Day 6", + "lbl": "larval:day 6", "meta": { "basicPropertyValues": [ { @@ -167567,7 +168745,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000039", - "lbl": "Larval:Days 7-13", + "lbl": "larval:days 7-13", "meta": { "basicPropertyValues": [ { @@ -167588,7 +168766,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000040", - "lbl": "Larval:Days 14-20", + "lbl": "larval:days 14-20", "meta": { "basicPropertyValues": [ { @@ -167609,7 +168787,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000041", - "lbl": "Larval:Days 21-29", + "lbl": "larval:days 21-29", "meta": { "basicPropertyValues": [ { @@ -167630,7 +168808,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000042", - "lbl": "Juvenile:Days 30-44", + "lbl": "juvenile:days 30-44", "meta": { "basicPropertyValues": [ { @@ -167651,7 +168829,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000043", - "lbl": "Juvenile:Days 45-89", + "lbl": "juvenile:days 45-89", "meta": { "basicPropertyValues": [ { @@ -167672,7 +168850,7 @@ }, { "id": "http://purl.obolibrary.org/obo/ZFS_0000044", - "lbl": "Adult", + "lbl": "adult", "meta": { "basicPropertyValues": [ { @@ -167691,9 +168869,121 @@ }, "type": "CLASS" }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000045", + "lbl": "blastula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000046", + "lbl": "cleavage", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000047", + "lbl": "gastrula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000048", + "lbl": "larva", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000049", + "lbl": "segmentation", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000050", + "lbl": "pharyngula", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0000051", + "lbl": "juvenile", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, + { + "id": "http://purl.obolibrary.org/obo/ZFS_0007000", + "lbl": "hatching", + "meta": { + "basicPropertyValues": [ + { + "pred": "http://www.geneontology.org/formats/oboInOwl#created_by", + "val": "yvonne" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#creation_date", + "val": "2014-11-05T08:33:09Z" + }, + { + "pred": "http://www.geneontology.org/formats/oboInOwl#hasOBONamespace", + "val": "zebrafish_stages" + } + ] + }, + "type": "CLASS" + }, { "id": "http://purl.obolibrary.org/obo/ZFS_0100000", - "lbl": "Stages", + "lbl": "zebrafish stage", "meta": { "basicPropertyValues": [ { diff --git a/zfa.obo b/zfa.obo index 23b92b4..43693b5 100644 --- a/zfa.obo +++ b/zfa.obo @@ -1,8 +1,8 @@ format-version: 1.2 -data-version: releases/2022-03-15 -date: 08:03:2021 11:16 -saved-by: ceriv -auto-generated-by: OBO-Edit 2.3.1 +data-version: releases/2022-12-09 +date: 29:11:2022 16:29 +saved-by: zfinf +auto-generated-by: OBO-Edit 2.3-beta5 subsetdef: cell_slim "cell_slim" synonymtypedef: PLURAL "PLURAL" default-namespace: zebrafish_anatomical_ontology @@ -10,12 +10,13 @@ treat-xrefs-as-genus-differentia: CARO part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: CL part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: TAO part_of NCBITaxon:7955 treat-xrefs-as-genus-differentia: VSAO part_of NCBITaxon:7955 -remark: SVN version: $Revision: 1.100$ ontology: zfa property_value: http://purl.org/dc/elements/1.1/description "ZFA description." xsd:string property_value: http://purl.org/dc/elements/1.1/title "Zebrafish Anatomy Ontology (ZFA)" xsd:string property_value: http://purl.org/dc/terms/license https://creativecommons.org/licenses/by/3.0/ -property_value: owl:versionInfo "2022-03-15" xsd:string +property_value: IAO:0000700 ZFA:0100000 +property_value: IAO:0000700 ZFS:0100000 +property_value: owl:versionInfo "2022-12-09" xsd:string [Term] id: ZFA:0000000 @@ -24,8 +25,8 @@ namespace: zebrafish_anatomy def: "The visible division between epiblast and hypoblast in the gastrula." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000000 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000001 @@ -36,9 +37,9 @@ synonym: "ciliated organ of asymmetry" EXACT [ZFIN:ZDB-PUB-050221-4] xref: TAO:0000001 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000023 ! forerunner cell group -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000077 ! tail bud -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000003 @@ -50,9 +51,9 @@ synonym: "adaxial cells" EXACT PLURAL [] xref: CL:0007016 xref: TAO:0000003 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000279 ! segmental plate -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000004 @@ -62,9 +63,9 @@ def: "Anterior portion of the axial hypoblast." [GOC:cvs, GOC:ymb, ORCiD:0000-00 synonym: "pre-polster" EXACT [ZFIN:ZDB-PUB-051019-5] xref: TAO:0000004 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001378 ! axial hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000005 @@ -74,9 +75,9 @@ def: "Blood vessels that carry blood away from the heart." [GOC:cvs, ORCiD:0000- synonym: "arterial system" RELATED [] xref: TAO:0000005 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000006 @@ -86,9 +87,9 @@ def: "The anterior round region of the yolk cell present after the yolk extensio synonym: "yolk ball" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000006 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000084 ! yolk -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000007 @@ -97,9 +98,9 @@ namespace: zebrafish_anatomy def: "A complex mixture of cells suspended in a liquid matrix that delivers nutrients to cells and removes wastes." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000007 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000008 @@ -111,9 +112,9 @@ synonym: "brain structure" RELATED [] xref: TAO:0000008 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001135 ! neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000009 @@ -124,9 +125,9 @@ synonym: "ventricle" EXACT [] xref: TAO:0000009 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001719 ! presumptive cardiac ventricle heart tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000010 @@ -135,8 +136,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that functions in circulation and has as its parts the heart and vasculature. The lymphatic system is considered part of the cardiovascular system." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000010 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000011 @@ -146,10 +147,10 @@ def: "Extension of the dorsal aorta in the post-vent region." [GOC:cvs, ORCiD:00 synonym: "CA" EXACT [] xref: TAO:0000011 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000012 @@ -160,8 +161,8 @@ synonym: "cns" EXACT [] xref: TAO:0000012 is_a: ZFA:0000396 ! nervous system relationship: develops_from ZFA:0000063 ! presumptive neural plate -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000013 @@ -172,8 +173,8 @@ synonym: "cranial ganglia" EXACT PLURAL [] synonym: "presumptive cranial ganglia" RELATED [] xref: TAO:0000013 is_a: ZFA:0000190 ! ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000014 @@ -185,10 +186,10 @@ synonym: "dorsal aortic root" EXACT [] xref: TAO:0000014 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005077 ! vascular cord -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000015 @@ -205,8 +206,8 @@ def: "The outer layer of the embryo derived from the epiblast. The definitive ec xref: TAO:0000016 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0000018 ! epiblast -relationship: end ZFS:0000038 ! Larval:Day 6 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000038 ! larval:day 6 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000017 @@ -215,8 +216,8 @@ namespace: zebrafish_anatomy xref: TAO:0000017 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0000416 ! presumptive endoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000035 ! larval:protruding-mouth +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000018 @@ -226,9 +227,9 @@ def: "The outer of the two layers of the blastoderm that form during gastrulatio xref: TAO:0000018 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000019 @@ -240,11 +241,11 @@ synonym: "pineal gland" EXACT [] synonym: "pineal organ" EXACT [] xref: TAO:0000019 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001127 ! visual system relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000020 @@ -255,8 +256,8 @@ synonym: "extraembryonic structures" EXACT PLURAL [] xref: CARO:0000042 xref: TAO:0000020 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000022 @@ -269,9 +270,9 @@ synonym: "fp" EXACT [] xref: TAO:0000022 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001218 ! presumptive floor plate -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000023 @@ -284,8 +285,8 @@ synonym: "forerunner cells" EXACT PLURAL [] xref: TAO:0000023 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001126 ! noninvoluting endocytic marginal cell cluster -relationship: end ZFS:0000023 ! Segmentation:1-4 somites -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000023 ! segmentation:1-4 somites +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0000024 @@ -295,9 +296,9 @@ def: "Layer of the retina that contains the ganglion cell bodies." [GOC:mh, ORCi synonym: "ganglion cell layer" EXACT [] xref: TAO:0000024 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000026 @@ -308,8 +309,8 @@ synonym: "hgg" EXACT [] xref: TAO:0000026 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000058 ! polster -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000027 @@ -319,9 +320,9 @@ def: "Skeletal system of paired fins." [GOC:mh, ORCiD:0000-0001-9114-8737] synonym: "appendicular skeleton" EXACT [] xref: TAO:0000027 is_a: ZFA:0000434 ! skeletal system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005596 ! paired fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000028 @@ -333,9 +334,9 @@ synonym: "heart primordia" EXACT PLURAL [] xref: TAO:0000028 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001065 ! lateral mesoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000029 @@ -346,9 +347,9 @@ synonym: "rhombencephalon" EXACT [] xref: TAO:0000029 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007043 ! hindbrain neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000030 @@ -359,9 +360,9 @@ synonym: "maculae utricle" EXACT PLURAL [] xref: TAO:0000030 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000168 ! anterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000700 ! utricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000031 @@ -371,9 +372,9 @@ def: "Portion of tissue that arises from the arise from the lateral edges of the xref: TAO:0000031 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001217 ! presumptive hypochord -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000017 ! endoderm -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000032 @@ -382,9 +383,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure which is the largest portion of diencephalon and is ventrally located. The hypothalamus arises near the end of the segmentation period and the embryonic hypothalamic region gives rise to the neurohypophysis and other diencephalic nuclei." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000032 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000033 @@ -397,9 +398,9 @@ xref: TAO:0000033 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000121 ! lateral plate mesoderm relationship: develops_from ZFA:0001201 ! ventral lateral mesoderm -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000034 @@ -409,9 +410,9 @@ def: "A sensory system on the surface of the fish, consisting of small sensory p synonym: "ll" EXACT [] xref: TAO:0000034 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000035 @@ -422,9 +423,9 @@ synonym: "lenses" EXACT PLURAL [] xref: TAO:0000035 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001679 ! solid lens vesicle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000036 @@ -433,8 +434,8 @@ namespace: zebrafish_anatomy def: "System responsible for the production and movement of bile." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000036 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000037 @@ -445,8 +446,8 @@ synonym: "anatomical structures" EXACT PLURAL [] xref: CARO:0000003 xref: TAO:0000037 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000038 @@ -455,8 +456,8 @@ namespace: zebrafish_anatomy def: "Embryonic structure, the edge of the blastoderm." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000038 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000039 @@ -464,8 +465,8 @@ name: median axial vein namespace: zebrafish_anatomy xref: TAO:0000039 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000040 @@ -475,8 +476,8 @@ def: "Surface structure that will develop into one of the median fins. Extends synonym: "median fin" RELATED [] xref: TAO:0000040 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000041 @@ -485,8 +486,8 @@ namespace: zebrafish_anatomy xref: TAO:0000041 is_a: ZFA:0001122 ! primary germ layer relationship: develops_from ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000042 @@ -499,9 +500,9 @@ synonym: "midbrain-hindbrain boundary" EXACT [] xref: TAO:0000042 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007047 ! midbrain hindbrain boundary neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000043 @@ -512,9 +513,9 @@ subset: cell_slim synonym: "muscle pioneers somite 1" EXACT PLURAL [] xref: TAO:0000043 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000072 ! somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000044 @@ -524,9 +525,9 @@ def: "Portion of somite 14 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000044 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000045 @@ -536,8 +537,8 @@ def: "A cell population arising from the dorsolateral aspect of the central nerv xref: TAO:0000045 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007082 ! neural plate border -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000046 @@ -549,9 +550,9 @@ synonym: "neuroretina" EXACT [] xref: TAO:0000046 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001071 ! presumptive neural retina -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000047 @@ -563,9 +564,9 @@ synonym: "nose" RELATED [] xref: TAO:0000047 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000048 ! olfactory placode -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000048 @@ -576,9 +577,9 @@ synonym: "olfactory placodes" EXACT PLURAL [] xref: TAO:0000048 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007062 ! olfactory field -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000049 @@ -588,9 +589,9 @@ def: "Lumen of optic stalk." [ZFIN:ZDB-PUB-101008-1] synonym: "optic recesses" EXACT PLURAL [] xref: TAO:0000049 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000050 @@ -601,9 +602,9 @@ synonym: "optic vesicles" EXACT PLURAL [] xref: TAO:0000050 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000570 ! optic primordium -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000051 @@ -616,8 +617,8 @@ synonym: "ov" EXACT [] xref: TAO:0000051 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000138 ! otic placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000052 @@ -627,9 +628,9 @@ def: "Actinotrichium which is part of the dorsal fin fold." [GOC:cvs, ORCiD:0000 synonym: "dorsal actinotrichia" EXACT PLURAL [] xref: TAO:0000052 is_a: ZFA:0000089 ! fin fold actinotrichium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000102 ! dorsal fin fold -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000053 @@ -639,9 +640,9 @@ def: "Embryonic structure part of the mesoderm fated to become segmental plate." synonym: "presumptive segmental plates" EXACT PLURAL [] xref: TAO:0000053 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000054 @@ -651,9 +652,9 @@ def: "Serous membrane that surrounds the heart." [GOC:cvs, ORCiD:0000-0002-2244- synonym: "pericardial sac" EXACT [] xref: TAO:0000054 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000056 @@ -662,9 +663,9 @@ namespace: zebrafish_anatomy def: "Swollen region of the anterior foregut, posterior to the mouth and anterior to the liver; its walls form the jaws and gills." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000056 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000058 @@ -675,9 +676,9 @@ synonym: "pillow" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000058 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000004 ! anterior axial hypoblast -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000060 ! prechordal plate -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000059 @@ -688,8 +689,8 @@ synonym: "post optic commissure" EXACT [] synonym: "post-optic commissure" EXACT [] xref: TAO:0000059 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000060 @@ -698,9 +699,9 @@ namespace: zebrafish_anatomy def: "Axial hypoblast located anterior to the chorda mesoderm; the polster is its most anterior region." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000060 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001204 ! axial mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000062 @@ -710,10 +711,10 @@ def: "Embryonic structure that gives rise to the forebrain." [GOC:mh, ORCiD:0000 synonym: "presumptive prosencephalon" EXACT [] xref: TAO:0000062 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000063 @@ -727,8 +728,8 @@ synonym: "prospective neuroectoderm" EXACT [] synonym: "prospective vegetal ectoderm" EXACT [] xref: TAO:0000063 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000021 ! gastrula:90%-epiboly +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000064 @@ -739,9 +740,9 @@ synonym: "outer layer optic cup" EXACT [] synonym: "presumptive pigmented epithelia" EXACT PLURAL [] xref: TAO:0000064 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000066 @@ -751,9 +752,9 @@ def: "An inward fold on the surface of the embryonic ectoderm that develops into synonym: "anus" RELATED [] xref: TAO:0000066 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000067 @@ -763,9 +764,9 @@ def: "Intermediate mesoderm that is located beneath the anterior somites and giv synonym: "pronephric primordium" EXACT [ZFIN:ZDB-PUB-000606-4] xref: TAO:0000067 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0001206 ! intermediate mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000068 @@ -775,9 +776,9 @@ def: "Cluster of cells in the neural plate that have the potential to become neu synonym: "proneural clusters" EXACT PLURAL [] xref: TAO:0000068 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000069 @@ -788,8 +789,8 @@ synonym: "r6" EXACT [] xref: TAO:0000069 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001210 ! presumptive rhombomere 6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000070 @@ -810,9 +811,9 @@ synonym: "Spemann Mangold organizer" EXACT [] synonym: "Spemann's organizer" EXACT [] xref: TAO:0000071 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000072 @@ -821,8 +822,8 @@ namespace: zebrafish_anatomy def: "Anteriormost undifferentiated mesodermal component of early trunk segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000072 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000073 @@ -831,8 +832,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 5 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000073 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000074 @@ -841,8 +842,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 26 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000074 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000075 @@ -854,9 +855,9 @@ synonym: "spinal cord structure" RELATED [] xref: TAO:0000075 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0007042 ! spinal cord neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000076 @@ -867,9 +868,9 @@ synonym: "gas bladder" EXACT [] xref: TAO:0000076 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005335 ! swim bladder bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000077 @@ -880,8 +881,8 @@ synonym: "tailbud" EXACT [] xref: TAO:0000077 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000078 @@ -891,9 +892,9 @@ def: "Actinotrichium which is part of the ventral fin fold." [GOC:mh, ORCiD:0000 synonym: "ventral actinotrichia" EXACT PLURAL [] xref: TAO:0000078 is_a: ZFA:0000089 ! fin fold actinotrichium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001069 ! ventral fin fold -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000079 @@ -903,9 +904,9 @@ def: "The anterior and dorsal forebrain neuromere. In ray-finned fishes and most xref: TAO:0000079 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000571 ! presumptive telencephalon -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000080 @@ -914,8 +915,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the trigeminal ganglion." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000080 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000081 @@ -923,8 +924,8 @@ name: trunk mesenchyme namespace: zebrafish_anatomy xref: TAO:0000081 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000082 @@ -934,9 +935,9 @@ def: "Vessels that carry blood to the heart." [GOC:cvs, ORCiD:0000-0002-2244-791 synonym: "venous system" RELATED [] xref: TAO:0000082 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000083 @@ -944,8 +945,8 @@ name: ventral mesoderm namespace: zebrafish_anatomy xref: TAO:0000083 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000084 @@ -958,8 +959,8 @@ synonym: "yolk cell" EXACT [] xref: CL:0000428 xref: TAO:0000084 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000085 @@ -975,9 +976,9 @@ synonym: "apical fold pectoral fin" EXACT [] xref: TAO:0000085 xref: TAO:0000736 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000086 @@ -988,9 +989,9 @@ synonym: "enveloping layer" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000086 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001484 ! superficial blastomere -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000088 @@ -1004,8 +1005,8 @@ xref: TAO:0000088 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000084 ! yolk relationship: develops_from ZFA:0000541 ! marginal blastomere -relationship: end ZFS:0000037 ! Larval:Day 5 -relationship: start ZFS:0000011 ! Blastula:1k-cell +relationship: end ZFS:0000037 ! larval:day 5 +relationship: start ZFS:0000011 ! blastula:1k-cell [Term] id: ZFA:0000089 @@ -1016,9 +1017,9 @@ synonym: "fin fold actinotrichia" EXACT PLURAL [] synonym: "median fin fold actinotrichium" EXACT [] xref: TAO:0000089 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000090 @@ -1027,9 +1028,9 @@ namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000090 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000091 @@ -1043,9 +1044,9 @@ synonym: "presumptive notochord" EXACT [] xref: TAO:0000091 xref: TAO:0001219 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001204 ! axial mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000092 @@ -1055,8 +1056,8 @@ def: "Organism subdivision running along the rostral-caudal axis of the early em synonym: "midline" EXACT [] xref: TAO:0000092 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0000093 @@ -1067,9 +1068,9 @@ subset: cell_slim synonym: "blastomeres" EXACT PLURAL [] xref: TAO:0000093 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000015 ! Blastula:Dome +relationship: end ZFS:0000015 ! blastula:dome relationship: part_of ZFA:0001175 ! blastodisc -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000094 @@ -1082,9 +1083,9 @@ synonym: "posterior blood island" RELATED [] synonym: "posterior ICM" EXACT [] xref: TAO:0000094 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000033 ! intermediate cell mass of mesoderm -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000095 @@ -1095,10 +1096,10 @@ synonym: "branchial arch skeleton" EXACT [] synonym: "gill arches 1-5 skeleton" EXACT [] xref: TAO:0000095 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000096 @@ -1107,8 +1108,8 @@ namespace: zebrafish_anatomy def: "Blood vasculature comprised of the cardinal veins." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000096 is_a: ZFA:0001079 ! blood vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000097 @@ -1117,8 +1118,8 @@ namespace: zebrafish_anatomy def: "Artery originating at the junction of the first two aortic arches and supplying the anterior brain." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000097 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000098 @@ -1130,8 +1131,8 @@ synonym: "cell division" RELATED [] synonym: "proliferation" RELATED [] xref: TAO:0000098 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000012 ! Blastula:High +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0000099 @@ -1140,9 +1141,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the brain." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000099 is_a: ZFA:0001267 ! cranial vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000100 @@ -1152,9 +1153,9 @@ def: "Brain structure derived from the anterior hindbrain, and perhaps including xref: TAO:0000100 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001442 ! upper rhombic lip -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000101 @@ -1164,9 +1165,9 @@ def: "The more posterior and ventral of two forebrain neuromeres, the other bein xref: TAO:0000101 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000574 ! presumptive diencephalon -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000102 @@ -1175,9 +1176,9 @@ namespace: zebrafish_anatomy def: "Region of the median fin fold that develops into the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000102 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000103 @@ -1230,9 +1231,9 @@ def: "A cellular, multilayered epithelium derived from the ectoderm. Zebrafish e xref: TAO:0000105 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000016 ! ectoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000106 @@ -1242,9 +1243,9 @@ def: "The posterior elongated region of the yolk cell that forms during the segm synonym: "yolk extension" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000106 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000084 ! yolk -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000107 @@ -1255,10 +1256,10 @@ synonym: "eyes" EXACT PLURAL [] xref: TAO:0000107 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001678 ! immature eye -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head relationship: part_of ZFA:0001127 ! visual system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000108 @@ -1268,8 +1269,8 @@ def: "Surface structure involved in locomotion." [TAO:WD] synonym: "fins" EXACT PLURAL [] xref: TAO:0000108 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000109 @@ -1280,9 +1281,9 @@ synonym: "prosencephalon" EXACT [] xref: TAO:0000109 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007041 ! forebrain neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000110 @@ -1297,10 +1298,10 @@ synonym: "ventricle IV" EXACT [] synonym: "ventriculus rhombencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000110 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000111 @@ -1310,8 +1311,8 @@ def: "Embryonic structure that forms as a thickened annulus at the blastoderm ri xref: TAO:0000111 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000038 ! margin -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000112 @@ -1324,9 +1325,9 @@ synonym: "gut tube" EXACT [] xref: TAO:0000112 is_a: ZFA:0001512 ! anatomical group relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000113 @@ -1335,8 +1336,8 @@ namespace: zebrafish_anatomy def: "Mesoderm that will give rise, along with cranial neural crest cells, to connective tissue, bone and musculature in the head." [http://www.Biology-Text.com] xref: TAO:0000113 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000114 @@ -1346,10 +1347,10 @@ def: "Blood pumping organ composed of four components: sinus venosus, atrium, ca xref: TAO:0000114 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000360 ! heart tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000115 @@ -1361,9 +1362,9 @@ synonym: "rudimentary heart" EXACT [] xref: TAO:0000115 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000028 ! heart primordium -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000116 @@ -1374,9 +1375,9 @@ synonym: "maculae lagena" EXACT PLURAL [] xref: TAO:0000116 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000374 ! lagena -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000117 @@ -1387,9 +1388,9 @@ synonym: "mesendoderm" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000117 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000711 ! DEL -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000111 ! germ ring -relationship: start ZFS:0000018 ! Gastrula:Germ-ring +relationship: start ZFS:0000018 ! gastrula:germ-ring [Term] id: ZFA:0000118 @@ -1399,10 +1400,10 @@ def: "A compound organ which is an endocrine gland located ventral to the dience synonym: "pituitary" EXACT [] xref: TAO:0000118 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000119 @@ -1413,9 +1414,9 @@ synonym: "inner nuclear layer" EXACT PLURAL [] synonym: "intermediate cell layer" EXACT [] xref: TAO:0000119 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000120 @@ -1426,9 +1427,9 @@ synonym: "lateral line ganglia" EXACT PLURAL [] synonym: "llg" EXACT [] xref: TAO:0000120 is_a: ZFA:0000013 ! cranial ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000121 @@ -1438,8 +1439,8 @@ synonym: "lateral plate" EXACT [] synonym: "LPM" EXACT [] xref: TAO:0000121 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000122 @@ -1449,10 +1450,10 @@ def: "Ectodermal primordium of the lens of the eye." [ZFIN:ZDB-PUB-961014-576] synonym: "lens placodes" EXACT PLURAL [] xref: TAO:0000122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000016 ! ectoderm relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000123 @@ -1462,10 +1463,10 @@ def: "Solid compound organ with three lobes that has many functions including bi xref: TAO:0000123 is_a: ZFA:0001491 ! solid compound organ relationship: develops_from ZFA:0000124 ! liver primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000124 @@ -1476,9 +1477,9 @@ synonym: "liver bud" EXACT [] xref: TAO:0000124 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000125 @@ -1489,9 +1490,9 @@ synonym: "neuromast mandibular" EXACT [] synonym: "neuromasts mandibular" EXACT PLURAL [] xref: TAO:0000125 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000259 ! mandibular lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000126 @@ -1501,9 +1502,9 @@ def: "Centra are represented by mineralized, calcified, or ossified portions tha synonym: "autocentrum" EXACT [] xref: TAO:0000126 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001189 ! vertebra -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000127 @@ -1520,9 +1521,9 @@ synonym: "mesencephalon" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000128 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0007039 ! midbrain neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000130 @@ -1534,9 +1535,9 @@ synonym: "nasal pit" EXACT [] synonym: "olfactory cavity" EXACT [] xref: TAO:0000130 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000131 @@ -1547,8 +1548,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000131 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000132 ! neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000025 ! segmentation:10-13 somites +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000132 @@ -1559,8 +1560,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000132 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000063 ! presumptive neural plate -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000133 @@ -1571,8 +1572,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0000133 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000131 ! neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000135 @@ -1583,8 +1584,8 @@ synonym: "notocord" EXACT [] xref: TAO:0000135 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000091 ! axial chorda mesoderm -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000136 @@ -1595,9 +1596,9 @@ synonym: "neuromast otic" EXACT [] synonym: "neuromasts otic" EXACT PLURAL [] xref: TAO:0000136 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000464 ! otic lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000137 @@ -1608,9 +1609,9 @@ synonym: "optic stalks" EXACT PLURAL [] xref: TAO:0000137 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007031 ! anterior neural rod -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000138 @@ -1619,9 +1620,9 @@ namespace: zebrafish_anatomy def: "Primordium of the ear epithelium before it hollows into the otic vesicle, present beside the hindbrain rudiment in the mid-segmentation period. (Also see Anatomical Atlas entry for ear by T. Whitfield.)" [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000138 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000140 @@ -1631,10 +1632,10 @@ def: "The pancreas is an organ composed of endocrine and exocrine glandular tiss xref: TAO:0000140 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001390 ! pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000141 @@ -1645,8 +1646,8 @@ synonym: "pectoral fin buds" EXACT PLURAL [] xref: TAO:0000141 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001453 ! pectoral fin field -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000142 @@ -1656,8 +1657,8 @@ def: "Nervous structures including ganglia outside of the central nervous system synonym: "pns" EXACT [] xref: TAO:0000142 is_a: ZFA:0000396 ! nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000143 @@ -1667,9 +1668,9 @@ def: "The layer within the retina where the photoreceptor cell receptor segments synonym: "retinal photoreceptor layers" EXACT PLURAL [] xref: TAO:0000143 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000144 @@ -1684,9 +1685,9 @@ synonym: "RPE" EXACT [] xref: TAO:0000144 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000064 ! presumptive retinal pigmented epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000146 @@ -1696,9 +1697,9 @@ def: "Embryonic structure that gives rise to the brain." [GOC:mh, ORCiD:0000-000 synonym: "brain rudiment" EXACT [] xref: TAO:0000146 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000148 @@ -1708,10 +1709,10 @@ def: "Embryonic structure that gives rise to the midbrain." [GOC:mh, ORCiD:0000- synonym: "presumptive mesencephalon" EXACT [] xref: TAO:0000148 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000149 @@ -1721,10 +1722,10 @@ def: "Multi-tissue structure that arises from the heart rudiment and will become xref: TAO:0000149 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000115 ! heart rudiment -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000150 @@ -1735,9 +1736,9 @@ synonym: "pronephric ducts" EXACT PLURAL [] xref: TAO:0000150 is_a: ZFA:0005171 ! duct relationship: develops_from ZFA:0000067 ! pronephric mesoderm -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000151 @@ -1749,10 +1750,10 @@ synonym: "pronephric nephron" EXACT [] xref: TAO:0000151 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000067 ! pronephric mesoderm -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000152 @@ -1763,9 +1764,9 @@ synonym: "retinas" EXACT PLURAL [] xref: TAO:0000152 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001202 ! optic cup -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000153 @@ -1776,8 +1777,8 @@ synonym: "r8" EXACT [] xref: TAO:0000153 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001214 ! presumptive rhombomere 8 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000154 @@ -1788,9 +1789,9 @@ synonym: "inflow tract" EXACT [] xref: TAO:0000154 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001722 ! presumptive sinus venosus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000155 @@ -1801,9 +1802,9 @@ synonym: "somitic mesoderm" RELATED [] xref: TAO:0000155 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000279 ! segmental plate -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000156 @@ -1812,8 +1813,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 20 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000156 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000157 @@ -1822,8 +1823,8 @@ namespace: zebrafish_anatomy def: "Posteriormost undifferentiated mesodermal component of early tail segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000157 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000158 @@ -1837,9 +1838,9 @@ xref: TAO:0000158 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001581 ! ural centrum 2 relationship: develops_from ZFA:0001583 ! preural centrum 1+ ural centrum 1 -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000159 @@ -1853,10 +1854,10 @@ synonym: "midbrain ventricle" EXACT [] synonym: "ventriculus mesencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000159 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000160 @@ -1869,10 +1870,10 @@ synonym: "midbrain tegmentum" EXACT [] xref: TAO:0000160 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000761 ! basal plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000161 @@ -1886,10 +1887,10 @@ synonym: "ventriculus diencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000161 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001259 ! forebrain ventricle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000162 @@ -1899,8 +1900,8 @@ def: "The ectodermal rudiment of the trigeminal ganglion, distinguishable during synonym: "trigeminal placodes" EXACT PLURAL [] xref: TAO:0000162 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000163 @@ -1910,8 +1911,8 @@ def: "System that removes and collects metabolic waste from the blood while main synonym: "urinary system" RELATED [] xref: TAO:0000163 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000164 @@ -1919,8 +1920,8 @@ name: ventral mesenchyme namespace: zebrafish_anatomy xref: TAO:0000164 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000165 @@ -1933,9 +1934,9 @@ synonym: "lateral lobe of hypothalamus" EXACT [] synonym: "lobus inferior hypothalami" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000165 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000347 ! dorsal hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000166 @@ -1952,9 +1953,9 @@ synonym: "medial crista" RELATED [ZFIN:ZDB-PUB-051116-3] xref: TAO:0000166 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000225 ! lateral crista primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000167 @@ -1963,9 +1964,9 @@ namespace: zebrafish_anatomy def: "Median fin skeleton that is located posterior to the anus." [TAO:curator] xref: TAO:0000167 is_a: ZFA:0001123 ! axial fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001162 ! anal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000168 @@ -1976,9 +1977,9 @@ synonym: "am" EXACT [] synonym: "anterior sensory patch" EXACT [] xref: TAO:0000168 is_a: ZFA:0000386 ! macula -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001671 ! macula communis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000169 @@ -1996,9 +1997,9 @@ synonym: "basibranchials" EXACT PLURAL [] xref: TAO:0000170 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001220 ! copula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000171 @@ -2015,10 +2016,10 @@ def: "Muscle that is part of pharyngeal arches 3-7 which are also known as the b synonym: "branchial muscles" EXACT PLURAL [] xref: TAO:0000172 is_a: ZFA:0001652 ! head muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000173 @@ -2031,9 +2032,9 @@ synonym: "truncus" EXACT [] xref: TAO:0000173 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001712 ! presumptive bulbus arteriosus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000174 @@ -2045,9 +2046,9 @@ synonym: "caudal cerebellar tracts" EXACT PLURAL [] synonym: "cerebellovestibular tracts" EXACT PLURAL [] xref: TAO:0000174 is_a: ZFA:0001708 ! cerebellar white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000175 @@ -2058,9 +2059,9 @@ synonym: "caudal lateral line nerve" EXACT [] xref: TAO:0000175 is_a: ZFA:0000641 ! cranial nerve is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000176 @@ -2071,8 +2072,8 @@ synonym: "area ventralis telencephali, nucleus lateralis" EXACT [] xref: TAO:0002204 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon relationship: develops_from ZFA:0005911 ! presumptive lateral nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000177 @@ -2081,8 +2082,8 @@ namespace: zebrafish_anatomy synonym: "caudal obliques" EXACT PLURAL [] xref: TAO:0000177 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000178 @@ -2091,9 +2092,9 @@ namespace: zebrafish_anatomy def: "Portion of the fish's body that is posterior to the vent and anterior to the caudal fin." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000178 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000179 @@ -2103,10 +2104,10 @@ def: "Cranial nerve root which is part of the abducens nerve (CN-VI) and is loca synonym: "radix caudalis nervi abducentis" EXACT [] xref: TAO:0000179 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000310 ! cranial nerve VI relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000180 @@ -2117,10 +2118,10 @@ synonym: "CV" EXACT [] xref: TAO:0000180 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0001286 ! caudal vein plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005037 ! post-vent vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000181 @@ -2133,9 +2134,9 @@ synonym: "Dp" EXACT [ZFIN:ZDB-PUB-150226-6] synonym: "posterior zone of dorsal telencephalic area" EXACT [] xref: TAO:0000181 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000182 @@ -2146,9 +2147,9 @@ synonym: "central posterior thalamic nucleus" EXACT [] synonym: "nucleus centralis posterior thalami" EXACT [] xref: TAO:0000182 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000653 ! dorsal thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000183 @@ -2158,9 +2159,9 @@ def: "Multi-tissue structure that is the central part of the pretectum." [GOC:mh xref: TAO:0000183 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005908 ! presumptive pretectum proliferative zone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000418 ! pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000184 @@ -2170,9 +2171,9 @@ def: "Transversely oriented bone connecting the occipital region of the skull do synonym: "cleithra" EXACT PLURAL [] xref: TAO:0000184 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000185 @@ -2182,8 +2183,8 @@ def: "Anterior commissure which abuts the preoptic region dorsally. From Neuroan synonym: "commissura anterior, pars ventralis" EXACT [] xref: TAO:0000185 is_a: ZFA:0001108 ! anterior commissure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000186 @@ -2193,10 +2194,10 @@ def: "Bilaterally paired longitudinal vein; the anterior cardinal returns blood synonym: "duct of Cuvier" EXACT [] xref: TAO:0000186 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000188 @@ -2204,13 +2205,13 @@ name: corpus cerebelli namespace: zebrafish_anatomy def: "Brain structure which is one of three parts of the cerebellum and is the entry point for a posterior cerebellar tract that carries cerebellar afferents from many brain stem nuclei. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] synonym: "cerebellar corpus" EXACT [] -synonym: "corpus cerebelli granular layer " EXACT [ZFIN:ZDB-PUB-961014-1280] +synonym: "corpus cerebelli granular layer" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "corpus cerebellum" EXACT PLURAL [] xref: TAO:0000188 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000189 @@ -2220,9 +2221,9 @@ def: "Anatomical cluster of skeletal elements that is a posterolateral part of t synonym: "cranial vault" RELATED [] xref: TAO:0000189 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000190 @@ -2232,9 +2233,9 @@ def: "Structures containing a collection of nerve cell bodies." [GOC:mh, ORCiD:0 synonym: "ganglia" EXACT PLURAL [] xref: TAO:0000190 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000191 @@ -2244,11 +2245,11 @@ def: "Dermal bone that forms the antero-lateral part of the lower jaw. It first synonym: "dentary bone" EXACT [] xref: TAO:0000191 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005488 ! mandibular symphysis relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000192 @@ -2258,9 +2259,9 @@ def: "The bundle of the sensory root of the trigeminal nerve that descends in th synonym: "radix descendens nervi trigemini" EXACT [] xref: TAO:0000192 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000193 @@ -2271,9 +2272,9 @@ synonym: "diffuse nuclei" EXACT PLURAL [] synonym: "DIL" EXACT [] xref: TAO:0000193 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000165 ! inferior lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000194 @@ -2283,9 +2284,9 @@ def: "Diencephalic nucleus that is part of the central pretectum and is ventral synonym: "nucleus opticus accessorius dorsalis" EXACT [] xref: TAO:0000194 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000195 @@ -2296,9 +2297,9 @@ synonym: "depressor dorsalis" EXACT [] synonym: "dorsal depressors" EXACT PLURAL [] xref: TAO:0000195 is_a: ZFA:0005270 ! depressor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000196 @@ -2308,11 +2309,11 @@ def: "The dorsal hypohyal is a small cartilage replacement bone ossifying from t synonym: "dorsal hypohyals" EXACT PLURAL [] xref: TAO:0000196 is_a: ZFA:0001381 ! hypohyal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005457 ! dorsal hypohyal-urohyal joint relationship: overlaps ZFA:0005458 ! dorsal hypohyal-ventral hypohyal joint relationship: overlaps ZFA:0005467 ! ceratohyal-dorsal hypohyal joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000197 @@ -2323,9 +2324,9 @@ synonym: "dorsal habenular nuclei" EXACT PLURAL [] synonym: "dorsal nuclei" EXACT PLURAL [] xref: TAO:0000197 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000213 ! habenula -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000199 @@ -2334,9 +2335,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the dorsal hypothalamic zone and is located periventricularly. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000199 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000347 ! dorsal hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000200 @@ -2348,8 +2349,8 @@ synonym: "DRG" EXACT [] xref: TAO:0000200 is_a: ZFA:0001573 ! trunk ganglion relationship: develops_from ZFA:0001024 ! trunk neural crest -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000201 @@ -2357,8 +2358,8 @@ name: dorsal transverse namespace: zebrafish_anatomy xref: TAO:0000201 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000202 @@ -2369,10 +2370,10 @@ synonym: "EBA" EXACT [] xref: TAO:0000202 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000203 @@ -2390,9 +2391,9 @@ synonym: "oesophagus" EXACT [] xref: TAO:0000204 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000205 @@ -2404,9 +2405,9 @@ synonym: "lateralis superficialis ventralis" EXACT [] synonym: "LSV" RELATED [] xref: TAO:0000205 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000206 @@ -2418,9 +2419,9 @@ synonym: "nucleus motorius nervi facialis" EXACT [] synonym: "nVII" EXACT [] xref: TAO:0000206 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000207 @@ -2429,8 +2430,8 @@ namespace: zebrafish_anatomy def: "Musculature part of fin." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000207 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000208 @@ -2439,11 +2440,11 @@ namespace: zebrafish_anatomy def: "The compound organ that stores bile." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000208 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000209 @@ -2453,8 +2454,8 @@ def: "Preglomerular nucleus which is located between the rostral and medial preg synonym: "lateral preglomerular nuclei" EXACT PLURAL [] xref: TAO:0000209 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000210 @@ -2464,9 +2465,9 @@ def: "Portion of tissue that is the caudal gigantocellular portion of the magnoc synonym: "nucleus praeopticus magnocellularis, pars gigantocellularis" EXACT [] xref: TAO:0000210 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000248 ! magnocellular preoptic nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000211 @@ -2476,9 +2477,9 @@ def: "Multi-tissue structure that is the transverse vertical platelet on the gil synonym: "gill lamellae" EXACT PLURAL [] xref: TAO:0000211 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000212 @@ -2491,9 +2492,9 @@ synonym: "eminentia granularis" EXACT [] synonym: "lateral granular eminence" EXACT [] xref: TAO:0000212 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000307 ! vestibulolateralis lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000213 @@ -2504,9 +2505,9 @@ synonym: "habenulae" EXACT PLURAL [] synonym: "habenular nucleus" EXACT [] xref: TAO:0000213 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000214 @@ -2525,9 +2526,9 @@ namespace: zebrafish_anatomy def: "Hindbrain nucleus where climbing fibers originate. The neurons in the inferior olive are capable of prolonged oscillatory activity. The inferior olive is called a precerebellar nucleus since virtually all of the efferent axons terminate in the cerebellum." [GOC:mh, ISBN:0471888893, ORCiD:0000-0001-9114-8737] xref: TAO:0000215 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000216 @@ -2536,9 +2537,9 @@ namespace: zebrafish_anatomy comment: This may need to be treated as a waypoint in the development of the various muscles or as a group of muscles. xref: TAO:0000216 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000217 @@ -2551,9 +2552,9 @@ synonym: "otocyst" RELATED [] xref: TAO:0000217 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0000051 ! otic vesicle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000219 @@ -2562,9 +2563,9 @@ namespace: zebrafish_anatomy synonym: "intermediate reticular formations" EXACT PLURAL [] xref: TAO:0000219 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000542 ! medial column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000220 @@ -2577,8 +2578,8 @@ synonym: "lateral semicircular canals" EXACT PLURAL [] synonym: "lateral semicircular duct" EXACT [] xref: TAO:0000220 is_a: ZFA:0000431 ! semicircular canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000221 @@ -2587,8 +2588,8 @@ namespace: zebrafish_anatomy synonym: "internal levators" EXACT PLURAL [] xref: TAO:0000221 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000222 @@ -2599,8 +2600,8 @@ synonym: "isthmic primary nuclei" EXACT PLURAL [] synonym: "isthmic primary sensory trigeminal nucleus" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000222 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000223 @@ -2612,9 +2613,9 @@ synonym: "lacrimal" EXACT [] synonym: "lacrymal bone" EXACT [] xref: TAO:0000223 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000224 @@ -2637,9 +2638,9 @@ def: "Is an otic epithelium that will mature into the lateral crista." [GOC:ymb, synonym: "lateral crista primordia" EXACT PLURAL [] xref: TAO:0000225 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000226 @@ -2650,12 +2651,12 @@ synonym: "lateral ethmoids" EXACT PLURAL [] xref: TAO:0000226 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001503 ! lamina orbitonasalis -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005420 ! autopalatine-lateral ethmoid joint relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000227 @@ -2667,9 +2668,9 @@ synonym: "lateral hypothalamic nuclei" EXACT PLURAL [] synonym: "lateral tuberal nucleus" EXACT [] xref: TAO:0000227 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000228 @@ -2680,9 +2681,9 @@ synonym: "lateral line primordia" EXACT PLURAL [] synonym: "llp" EXACT [] xref: TAO:0000228 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000229 @@ -2692,8 +2693,8 @@ def: "Telencephalic white matter which extends between the olfactory bulb and th synonym: "tractus olfactorius lateralis" EXACT [] xref: TAO:0000229 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000230 @@ -2703,9 +2704,9 @@ def: "Muscle that attaches to the parhypurpophyses. The muscle inserts on the up synonym: "hypochordal longitudinalis" EXACT [] xref: TAO:0000230 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000628 ! caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000231 @@ -2719,9 +2720,9 @@ synonym: "recessus lateralis" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000231 xref: TAO:0001799 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000232 @@ -2732,8 +2733,8 @@ synonym: "lateral semicircular canal primordia" RELATED PLURAL [] synonym: "lateral semicircular canal primordium" RELATED [] xref: TAO:0000232 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000233 @@ -2747,9 +2748,9 @@ synonym: "lower semilunar valve" EXACT [ZFIN:ZDB-PUB-060921-12] synonym: "mandibular valve" EXACT [] xref: TAO:0000233 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000234 @@ -2760,9 +2761,9 @@ synonym: "maculae neglecta" EXACT PLURAL [] xref: TAO:0000234 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000235 @@ -2772,9 +2773,9 @@ def: "Diencephalic nucleus that is part of the superficial pretectum and is caud synonym: "magnocellular superficial pretectal nuclei" EXACT PLURAL [] xref: TAO:0000235 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000687 ! superficial pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000236 @@ -2784,10 +2785,10 @@ def: "Muscle that are part of the mandibular arch (pharyngeal arch 1)." [GOC:cv synonym: "mandibular muscles" EXACT PLURAL [] xref: TAO:0000236 is_a: ZFA:0001652 ! head muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001612 ! pharyngeal arch 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000237 @@ -2796,9 +2797,9 @@ namespace: zebrafish_anatomy synonym: "medial forebrain bundles diencephalon" EXACT PLURAL [] xref: TAO:0000237 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005111 ! medial forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000238 @@ -2808,8 +2809,8 @@ def: "Telencephalic white matter which extends between the olfactory bulb and th synonym: "tractus olfactorius medialis" EXACT [] xref: TAO:0000238 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000239 @@ -2820,9 +2821,9 @@ synonym: "mesocoracoid bones" EXACT PLURAL [] xref: TAO:0000239 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001537 ! mesocoracoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000240 @@ -2833,12 +2834,12 @@ synonym: "metapterygoids" EXACT PLURAL [] xref: TAO:0000240 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0005902 ! pterygoid process -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005469 ! hyomandibula-metapterygoid joint relationship: overlaps ZFA:0005486 ! quadrate-metapterygoid joint relationship: part_of ZFA:0001272 ! palatoquadrate arch relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000241 @@ -2846,9 +2847,9 @@ name: midline column namespace: zebrafish_anatomy xref: TAO:0000241 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000421 ! reticular formation -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000242 @@ -2858,8 +2859,8 @@ def: "Gonochoristic organism that can produce male gametes." [GOC:mh, ORCiD:0000 xref: CARO:0000027 xref: TAO:0000242 is_a: ZFA:0001094 ! whole organism -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000243 @@ -2872,9 +2873,9 @@ synonym: "neuromasts" EXACT PLURAL [] xref: TAO:0000243 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0005227 ! protoneuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000244 @@ -2883,9 +2884,9 @@ namespace: zebrafish_anatomy synonym: "Edinger-Westphal nucleus" EXACT [] xref: TAO:0000244 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000245 @@ -2895,8 +2896,8 @@ def: "Sensory trigeminal nucleus that lies at the mediodorsal edge of the descen synonym: "sensory nucleus of the descending trigeminal root" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000245 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000246 @@ -2905,9 +2906,9 @@ namespace: zebrafish_anatomy def: "Telencephalic nucleus which is located immediately ventral to the caudal zone of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000246 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000247 @@ -2920,8 +2921,8 @@ synonym: "octaval nerve" EXACT [] synonym: "statoacoustic nerve" EXACT [] xref: TAO:0000247 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000248 @@ -2931,9 +2932,9 @@ def: "Diencephalic nucleus that is dorsal to the caudal parvocellular preoptic n synonym: "magnocellular preoptic nuclei" EXACT PLURAL [] xref: TAO:0000248 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000249 @@ -2943,9 +2944,9 @@ synonym: "CN-I" EXACT [] synonym: "olfactory nerve" EXACT [] xref: TAO:0000249 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000250 @@ -2955,12 +2956,12 @@ def: "Dermal bone that articulates anteriorly with the hyomandibula. The opercle synonym: "opercles" EXACT PLURAL [] xref: TAO:0000250 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005885 ! operculohyoid ligament relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000251 @@ -2979,8 +2980,8 @@ synonym: "optic tracts" EXACT PLURAL [] synonym: "tractus opticus" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000252 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000253 @@ -2991,12 +2992,12 @@ synonym: "orbitosphenoids" EXACT PLURAL [] xref: TAO:0000253 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001505 ! taenia marginalis anterior -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000254 @@ -3007,9 +3008,9 @@ comment: During normal development, the exocrine anlage arises from bilateral se synonym: "pancreatic anlage" EXACT [ZFIN:ZDB-PUB-050623-3] xref: TAO:0000254 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000255 @@ -3022,8 +3023,8 @@ xref: TAO:0000255 is_a: ZFA:0000041 ! mesoderm is_a: ZFA:0000081 ! trunk mesenchyme relationship: develops_from ZFA:0000591 ! presumptive paraxial mesoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000256 @@ -3032,9 +3033,9 @@ namespace: zebrafish_anatomy synonym: "pars subcommissuralis of V" EXACT [] xref: TAO:0000256 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000304 ! ventral telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000257 @@ -3044,9 +3045,9 @@ def: "Cartilage which is part of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-22 synonym: "pectoral fin cartilages" EXACT PLURAL [] xref: TAO:0000257 is_a: ZFA:0001543 ! paired fin cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000258 @@ -3056,22 +3057,22 @@ def: "Musculature that is part of the pelvic fin." [GOC:mh, ORCiD:0000-0001-9114 xref: TAO:0000258 is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001449 ! mesenchyme pelvic fin -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000259 name: mandibular lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "mandibular lateral lines" EXACT PLURAL [] synonym: "mandibular line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000259 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000260 @@ -3082,9 +3083,9 @@ synonym: "periventricular nuclei" EXACT PLURAL [] synonym: "ventral zone of periventricular hypothalamus" EXACT [] xref: TAO:0000260 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000261 @@ -3092,8 +3093,8 @@ name: pharyngohyoid namespace: zebrafish_anatomy xref: TAO:0000261 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000262 @@ -3106,8 +3107,8 @@ synonym: "posterior semicircular canals" EXACT PLURAL [] synonym: "posterior semicircular duct" EXACT [] xref: TAO:0000262 is_a: ZFA:0000431 ! semicircular canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000263 @@ -3119,9 +3120,9 @@ synonym: "precaudal vertebrae" EXACT PLURAL [] synonym: "trunk vertebra" RELATED [] xref: TAO:0000263 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000264 @@ -3131,11 +3132,11 @@ def: "Dermal bone that is part of the opercular flap and bears the preopercular synonym: "preopercles" EXACT PLURAL [] xref: TAO:0000264 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000265 @@ -3144,8 +3145,8 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become dorsal mesoderm. Determined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000265 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000266 @@ -3157,8 +3158,8 @@ synonym: "pretectomamillary tract" EXACT [] synonym: "TPp" RELATED [] xref: TAO:0000266 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000267 @@ -3169,9 +3170,9 @@ synonym: "olfactory nerve layer" EXACT [ZFIN:ZDB-PUB-050523-2] synonym: "stratum nervosum bulbi olfactorii" EXACT [] xref: TAO:0000267 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000268 @@ -3181,9 +3182,9 @@ def: "Rod-like internal median skeletal support bones of the anal fin, which art synonym: "anal fin proximal radials" EXACT PLURAL [] xref: TAO:0000268 is_a: ZFA:0001646 ! anal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001420 ! anal fin pterygiophore -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000269 @@ -3195,9 +3196,9 @@ synonym: "flexor caudalis ventralis inferioris" EXACT [] synonym: "inferior ventral flexor" EXACT [] xref: TAO:0000269 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000270 @@ -3207,11 +3208,11 @@ def: "The dermal maxilla forms part of the upper jaw. It is first visible as a s synonym: "maxillae" EXACT PLURAL [] xref: TAO:0000270 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005421 ! autopalatine-maxillary joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000271 @@ -3221,8 +3222,8 @@ def: "The internal skeletal supports of the median and paired fins." [TAO:curat synonym: "radials" EXACT PLURAL [] xref: TAO:0000271 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000272 @@ -3231,8 +3232,8 @@ namespace: zebrafish_anatomy def: "System responsible for the exchange of gases across the gill membranes." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000272 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000274 @@ -3243,8 +3244,8 @@ synonym: "anterior octaval nucleus" EXACT [] synonym: "nucleus octavus anterior" EXACT [] xref: TAO:0000274 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000275 @@ -3252,9 +3253,9 @@ name: rostral tegmental nucleus namespace: zebrafish_anatomy xref: TAO:0000275 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000276 @@ -3262,9 +3263,9 @@ name: rostrolateral thalamic nucleus of Butler & Saidel namespace: zebrafish_anatomy xref: TAO:0000276 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000277 @@ -3275,9 +3276,9 @@ synonym: "scales" EXACT PLURAL [] xref: TAO:0000277 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001704 ! scale primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001183 ! dermal superficial region -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000278 @@ -3285,10 +3286,10 @@ name: secondary gustatory nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000278 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000279 @@ -3299,9 +3300,9 @@ synonym: "presomitic mesoderm" EXACT [] synonym: "PSM" EXACT [] xref: TAO:0000279 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000255 ! paraxial mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000280 @@ -3312,9 +3313,9 @@ synonym: "medial division" EXACT [] synonym: "valvula cerebelli, pars medialis" EXACT [] xref: TAO:0000280 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000281 @@ -3326,9 +3327,9 @@ synonym: "sensory hair cells posterior macula" EXACT PLURAL [] xref: TAO:0000281 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001099 ! immature hair cell posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000558 ! posterior macula -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000282 @@ -3338,9 +3339,9 @@ def: "Nervous system responsible for transmitting sensory stimuli." [GOC:mh, ORC synonym: "sensory systems" EXACT PLURAL [] xref: TAO:0000282 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000284 @@ -3350,11 +3351,11 @@ def: "Dermal bone lying below the opercle. The subopercle is a paired bone." [GO synonym: "subopercles" EXACT PLURAL [] xref: TAO:0000284 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000285 @@ -3366,9 +3367,9 @@ synonym: "superficial adductors" EXACT PLURAL [] xref: TAO:0000285 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000286 @@ -3379,9 +3380,9 @@ synonym: "lateral superficial muscle" RELATED [] synonym: "lateralis superficialis" EXACT [] xref: TAO:0000286 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000287 @@ -3389,13 +3390,13 @@ name: superior caudal dorsal flexor namespace: zebrafish_anatomy def: "Paired, deep caudal fin muscles that originate from the 30th vertebra and extend toward the dorsal base of the caudal fin where they insert broadly on fin rays." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] synonym: "CDS" RELATED [] -synonym: "flexor caudalis dorsalis superioris " EXACT [] +synonym: "flexor caudalis dorsalis superioris" EXACT [] synonym: "superior dorsal flexor" EXACT [] xref: TAO:0000287 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000288 @@ -3403,9 +3404,9 @@ name: supracarinalis namespace: zebrafish_anatomy xref: TAO:0000288 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000289 @@ -3421,9 +3422,9 @@ namespace: zebrafish_anatomy def: "Anatomical cluster that forms the floor and sidewalls of the middle part of the cranium." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000290 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000291 @@ -3435,9 +3436,9 @@ synonym: "medial octavolateralis nuclei" EXACT PLURAL [] synonym: "MON" RELATED [] xref: TAO:0000291 is_a: ZFA:0000381 ! lateral line sensory nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000292 @@ -3447,8 +3448,8 @@ def: "Organism subdivision which is the collection of anatomical structures on t synonym: "surface structures" EXACT PLURAL [] xref: TAO:0000292 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000293 @@ -3457,9 +3458,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is located between the dorsal diencephalon and the mesencephalon and contains the caudal commissure. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000293 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000294 @@ -3469,9 +3470,9 @@ def: "Diencephalic nucleus which is part of the caudal tuberculum. In goldfish synonym: "lateral torus" EXACT [] xref: TAO:0000294 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000295 @@ -3486,8 +3487,8 @@ xref: TAO:0000295 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000080 ! trigeminal neural crest relationship: develops_from ZFA:0000162 ! trigeminal placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000296 @@ -3495,8 +3496,8 @@ name: uncrossed tecto-bulbar tract namespace: zebrafish_anatomy xref: TAO:0000296 is_a: ZFA:0000446 ! tecto-bulbar tract -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000297 @@ -3505,9 +3506,9 @@ namespace: zebrafish_anatomy def: "The multi-tissue, vagal lobe is a large, paired brain stem structure flanking the unpaired facial lobe laterally. The vagal lobe contains motor and gustatory neurons. While some degree of histological segregation is apparent within the vagal lobe, a clear lamination, as seen in goldfish or carp is absent." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-1280] synonym: "LX" EXACT [ZFIN:ZDB-PUB-961014-1280] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000298 @@ -3519,9 +3520,9 @@ synonym: "cloacal vent" EXACT [] xref: TAO:0000298 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0000066 ! proctodeum -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000299 @@ -3537,8 +3538,8 @@ synonym: "ventral entopeduncular nucleus V" EXACT [] xref: TAO:0000299 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon relationship: develops_from ZFA:0005910 ! presumptive ventral entopeduncular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000300 @@ -3549,11 +3550,11 @@ synonym: "lower hypohyal" EXACT [] synonym: "ventrohyal" EXACT [] xref: TAO:0000300 is_a: ZFA:0001381 ! hypohyal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005458 ! dorsal hypohyal-ventral hypohyal joint relationship: overlaps ZFA:0005466 ! ceratohyal-ventral hypohyal joint relationship: overlaps ZFA:0005476 ! inter-ventral hypohyal joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000301 @@ -3564,9 +3565,9 @@ comment: Mature form at Hatching:Long-pec. synonym: "medial recti" EXACT PLURAL [] xref: TAO:0000301 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000302 @@ -3575,9 +3576,9 @@ namespace: zebrafish_anatomy def: "Habenular nucleus positioned ventromedially to the dorsal habenular nuclei. The ventral habenular nuclei are paired and symmetrical, each have a conical shape defined by a wide rostral end, occupying the entire anterior region of the habenula, and a narrow caudal end. The axons of the ventral habenular nucleus passed laterally through the interpeduncular nucleus and projected to the ventral part of the median raphe. The ventral habenular nucleus is homolog mammalian lateral habenular nucleus." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100202-7, ZFIN:ZDB-PUB-120709-5] xref: TAO:0000302 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000213 ! habenula -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000303 @@ -3587,8 +3588,8 @@ def: "Gonochoristic organism that can produce female gametes." [GOC:mh, ORCiD:00 xref: CARO:0000028 xref: TAO:0000303 is_a: ZFA:0001094 ! whole organism -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000304 @@ -3599,9 +3600,9 @@ synonym: "area ventralis telencephali" EXACT [] synonym: "subpallium" EXACT [] xref: TAO:0000304 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000305 @@ -3611,9 +3612,9 @@ def: "Groove that separates the paired inferior (or lateral) lobes of the hypoth synonym: "hypothalamic sulcus" RELATED [] xref: TAO:0000305 is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000306 @@ -3621,9 +3622,9 @@ name: ventrolateral thalamic nucleus namespace: zebrafish_anatomy xref: TAO:0000306 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000307 @@ -3632,9 +3633,9 @@ namespace: zebrafish_anatomy def: "Brain structure which is part of the cerebellum consists of the paired granular eminentia and the medial caudal lobe. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000307 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000308 @@ -3644,11 +3645,11 @@ def: "A thin medial unpaired dermal bone that is kite or paddle-shape. Underlyin synonym: "vomer" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0000308 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000309 @@ -3658,9 +3659,9 @@ def: "The portion of the YSL that is outside of the blastoderm margin during epi synonym: "E-YSL" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000309 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000013 ! Blastula:Oblong +relationship: start ZFS:0000013 ! blastula:oblong [Term] id: ZFA:0000310 @@ -3672,8 +3673,8 @@ synonym: "CN-VI" EXACT [] synonym: "nervus abducens" EXACT [] xref: TAO:0000310 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000311 @@ -3683,8 +3684,8 @@ def: "Is a mandibular muscle that consists of three subdivisions A1, A2, and A3. xref: TAO:0000311 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0007049 ! adductor mandibulae -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000312 @@ -3694,8 +3695,8 @@ def: "Sensory trigeminal nucleus located at the tectal ventricle near the synenc synonym: "mesencephalic nuclei of trigeminal nerves" EXACT PLURAL [] xref: TAO:0000312 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000313 @@ -3706,9 +3707,9 @@ synonym: "anal inclinators" EXACT PLURAL [] synonym: "inclinatores anales" EXACT [ZFIN:ZDB-PUB-171118-8] xref: TAO:0000313 is_a: ZFA:0005276 ! inclinator muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000314 @@ -3721,8 +3722,8 @@ synonym: "anterior semicircular duct" EXACT [] synonym: "rostral vertical semicircular canal" EXACT [] xref: TAO:0000314 is_a: ZFA:0000431 ! semicircular canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000315 @@ -3733,9 +3734,9 @@ synonym: "lagenar otolith" EXACT [] synonym: "lagenolith" EXACT [] xref: TAO:0000315 is_a: ZFA:0001617 ! otolith -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000374 ! lagena -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000316 @@ -3748,9 +3749,9 @@ synonym: "glossohyal" EXACT [] xref: TAO:0000316 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001510 ! basihyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000317 @@ -3761,8 +3762,8 @@ synonym: "axial skeleton" EXACT [] xref: TAO:0000317 is_a: ZFA:0000434 ! skeletal system relationship: develops_from ZFA:0001080 ! sclerotome -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000318 @@ -3773,9 +3774,9 @@ synonym: "brain stem and spinal tract/commissure" EXACT [] synonym: "brain stem/spinal tracts and commissures" EXACT PLURAL [] xref: TAO:0000318 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000319 @@ -3785,9 +3786,9 @@ def: "The portion of tissue forming the membrane connecting the branchiostegals synonym: "branchiostegal membranes" EXACT PLURAL [] xref: TAO:0000319 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000320 @@ -3798,9 +3799,9 @@ synonym: "PC" RELATED [] synonym: "posterior commissure" EXACT [] xref: TAO:0000320 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000321 @@ -3809,8 +3810,8 @@ namespace: zebrafish_anatomy synonym: "caudal levators" EXACT PLURAL [] xref: TAO:0000321 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000322 @@ -3819,8 +3820,8 @@ namespace: zebrafish_anatomy synonym: "caudal octaval nuclei" EXACT PLURAL [] xref: TAO:0000322 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000323 @@ -3832,11 +3833,11 @@ xref: TAO:0000323 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001321 ! neurocranial trabecula relationship: develops_from ZFA:0001405 ! ethmoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000324 @@ -3847,9 +3848,9 @@ synonym: "caudal zone of periventricular hypothalamus" EXACT [] synonym: "nucleus periventricularis hypothalami, zona caudalis" EXACT [] xref: TAO:0000324 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000634 ! caudal hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000325 @@ -3859,9 +3860,9 @@ def: "Diencephalic nucleus which is part of the caudal tuberculum. It is target synonym: "posterior thalamic nucleus" EXACT [] xref: TAO:0000325 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000326 @@ -3871,8 +3872,8 @@ def: "Vertebra bearing a hemal arch and spine. The most posterior caudal vertebr synonym: "caudal vertebrae" EXACT PLURAL [] xref: TAO:0000326 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000327 @@ -3880,9 +3881,9 @@ name: central zone of the optic tectum namespace: zebrafish_anatomy xref: TAO:0000327 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000328 @@ -3892,8 +3893,8 @@ def: "Musculature system of the pharyngeal and head regions." [GOC:cvs, ORCiD:00 synonym: "head muscles" RELATED [] xref: TAO:0000328 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000329 @@ -3902,8 +3903,8 @@ namespace: zebrafish_anatomy def: "The egg shell." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000329 is_a: ZFA:0000020 ! extraembryonic structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000330 @@ -3913,9 +3914,9 @@ def: "Space proximal to the urogenital pore where the pronephric duct, intestine synonym: "cloaca lumen" EXACT [] xref: TAO:0000330 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000331 @@ -3925,8 +3926,8 @@ synonym: "commissura infima Halleri" EXACT [] synonym: "commissura infima of Haller" EXACT [] xref: TAO:0000331 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000332 @@ -3938,10 +3939,10 @@ synonym: "scapulocoracoid" RELATED [] xref: TAO:0000332 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005470 ! inter-coracoid joint relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000333 @@ -3949,9 +3950,9 @@ name: mesovarium namespace: zebrafish_anatomy xref: TAO:0000333 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000403 ! ovary -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000334 @@ -3961,9 +3962,9 @@ def: "Brain structure which is located ventrolaterally to the caudal preglomerul synonym: "mammillary body" EXACT [] xref: TAO:0000334 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000335 @@ -3972,8 +3973,8 @@ namespace: zebrafish_anatomy synonym: "tractus tectobulbaris cruciatus" EXACT [] xref: TAO:0000335 is_a: ZFA:0000446 ! tecto-bulbar tract -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000336 @@ -3997,9 +3998,9 @@ def: "CNS white matter that is part of the diencephalon." [GOC:mh, ORCiD:0000-00 synonym: "diencephalic tract/commissure" EXACT [] xref: TAO:0000338 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000339 @@ -4008,8 +4009,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that processes ingested substances." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000339 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000340 @@ -4022,8 +4023,8 @@ synonym: "entopeduncular nucleus, dorsal part" EXACT [] synonym: "nucleus entopeduncularis, pars dorsalis" EXACT [] xref: TAO:0000340 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000341 @@ -4036,9 +4037,9 @@ synonym: "dorsal flexors" EXACT PLURAL [] synonym: "flexor caudalis dorsalis inferioris" EXACT [] xref: TAO:0000341 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000342 @@ -4049,9 +4050,9 @@ synonym: "dorsal inclinators" EXACT PLURAL [] synonym: "inclinator dorsalis" EXACT [] xref: TAO:0000342 is_a: ZFA:0005276 ! inclinator muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000343 @@ -4064,22 +4065,22 @@ synonym: "dorsal nucleus of V" EXACT [] synonym: "Vd" RELATED [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000343 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000344 name: middle lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "middle lateral lines" EXACT PLURAL [] xref: TAO:0000344 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005118 ! middle lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000345 @@ -4091,9 +4092,9 @@ synonym: "dorsal recti" EXACT PLURAL [] synonym: "superior rectus" EXACT [ZFIN:ZDB-PUB-110512-18] xref: TAO:0000345 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000346 @@ -4104,9 +4105,9 @@ synonym: "DTN" RELATED [] synonym: "nucleus tegmentalis dorsalis" EXACT [] xref: TAO:0000346 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000347 @@ -4116,9 +4117,9 @@ def: "Brain structure which is the dorsal most region of the hypothalamus and ex xref: TAO:0000347 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0006000 ! intermediate hypothalamus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000348 @@ -4133,9 +4134,9 @@ namespace: zebrafish_anatomy def: "Skeletal muscle that is the dorsal-most component of the body musculature. The anterior region attaches to the back of the cranial vault and the dorsal region of the pectoral girdle. The epaxialis is bound to the skin by fibrous connective tissue and internally it inserts over the dorsal portion of the vertebral centra and fin pterygiophores and the neural spines. Posteriorly the epaxialis overlies the modified muscle of the caudal fin and inserts onto the dorsal ray bases of the fin. The anterior epaxial plays a role in feeding and the posterior region is central to locomotion." [GOC:cvs, ISBN:0125296509, ORCiD:0000-0002-2244-7917] xref: TAO:0000349 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000350 @@ -4145,8 +4146,8 @@ def: "Epipleurals lie below the horizontal septum and are posteroventrally direc synonym: "epipleurals" EXACT PLURAL [] xref: TAO:0000350 is_a: ZFA:0000526 ! intermuscular bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000351 @@ -4156,9 +4157,9 @@ def: "Anatomical cluster that is located in the anterior region of the cranium a synonym: "ethmoid region" EXACT [] xref: TAO:0000351 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000352 @@ -4168,9 +4169,9 @@ def: "Portion of tissue which is located between the glomerular layer and intern synonym: "stratum cellulare externum bulbi olfactorii" EXACT [] xref: TAO:0000352 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000353 @@ -4183,8 +4184,8 @@ synonym: "habenulointerpeduncular tract" EXACT [] synonym: "tractus habenulo-interpeduncularis" EXACT [] xref: TAO:0000353 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000354 @@ -4195,9 +4196,9 @@ synonym: "gills" EXACT PLURAL [] xref: TAO:0000354 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001107 ! internal gill bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000272 ! respiratory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000355 @@ -4206,9 +4207,9 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the midbrain." [GOC:CVS, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000355 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000356 @@ -4218,9 +4219,9 @@ def: "Dermal bone that is a small anterior projection present on all of pharynge synonym: "gill rakers" EXACT PLURAL [] xref: TAO:0000356 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000357 @@ -4230,9 +4231,9 @@ def: "Multi-tissue structure which is located in between the primary olfactory f synonym: "stratum glomerulosum bulbi olfactorii" EXACT [] xref: TAO:0000357 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000358 @@ -4241,9 +4242,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is the innermost layer of the corpus cerebelli and consists of small granule cells and larger Golgi cells. The granule cell receive excitatory input from the mossy fibers, and send parallel fibers to the molecular layer where they synapse with Purkinje cell dendrites." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000358 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000359 @@ -4252,8 +4253,8 @@ namespace: zebrafish_anatomy synonym: "commissura habenularum" EXACT [] xref: TAO:0000359 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000360 @@ -4263,10 +4264,10 @@ def: "Cavitated compound organ that will become the adult heart following loopin xref: TAO:0000360 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0000149 ! primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000010 ! cardiovascular system relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000362 @@ -4275,9 +4276,9 @@ namespace: zebrafish_anatomy def: "The hypaxialis consists of that part of the body musculature lying ventral to the midlateral horizontal septum." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-151106-17] xref: TAO:0000362 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000363 @@ -4288,9 +4289,9 @@ synonym: "hypobranchial bones" EXACT PLURAL [] xref: TAO:0000363 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000364 @@ -4302,8 +4303,8 @@ synonym: "hypuralia" EXACT [] synonym: "hypurals" EXACT PLURAL [] xref: TAO:0000364 is_a: ZFA:0000859 ! specialized hemal arch and spine -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000365 @@ -4313,10 +4314,10 @@ def: "Paired dermal bones, likened to a bone tube, positioned lateral to the sup synonym: "nasal bones" EXACT PLURAL [] xref: TAO:0000365 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000366 @@ -4326,9 +4327,9 @@ def: "Hindbrain nucleus that provides descending innervation to the brainstem an synonym: "posterior raphe nucleus" EXACT [] xref: TAO:0000366 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001429 ! raphe nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000367 @@ -4345,8 +4346,8 @@ def: "The outer protective barrier that separates the animal from its aquatic en synonym: "skin" EXACT [] xref: TAO:0000368 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000369 @@ -4356,8 +4357,8 @@ def: "Is a mandibular muscle that develops into the ventral intermandibularis an synonym: "intermandibular muscle" RELATED [ZFIN:ZDB-PUB-060921-12] xref: TAO:0000369 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000370 @@ -4366,9 +4367,9 @@ namespace: zebrafish_anatomy synonym: "intermediate thalamic nuclei" EXACT PLURAL [] xref: TAO:0000370 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000371 @@ -4377,8 +4378,8 @@ namespace: zebrafish_anatomy synonym: "internal pharyngoclavicularae" EXACT PLURAL [] xref: TAO:0000371 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000372 @@ -4386,9 +4387,9 @@ name: interpeduncular nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000372 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000373 @@ -4406,10 +4407,10 @@ def: "Otolith organ comprised of the macula lagena and asteriscus. The lagena i synonym: "lagenas" EXACT PLURAL [] xref: TAO:0000374 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005410 ! pars inferior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000375 @@ -4428,10 +4429,10 @@ alt_id: ZFA:0000489 def: "Dermal bone that is situated under or posterior to the eye and associated with the infraorbital sensory canal." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000376 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000379 @@ -4441,9 +4442,9 @@ def: "Portion of the lateral forebrain bundle that lies in the diencephalon." [G synonym: "lateral forebrain bundles diencephalon" EXACT PLURAL [] xref: TAO:0000379 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007012 ! lateral forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000380 @@ -4452,9 +4453,9 @@ namespace: zebrafish_anatomy synonym: "lateral lemniscus nuclei" EXACT PLURAL [] xref: TAO:0000380 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000381 @@ -4463,9 +4464,9 @@ namespace: zebrafish_anatomy synonym: "lateral line sensory nuclei" EXACT PLURAL [] xref: TAO:0000381 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000382 @@ -4476,8 +4477,8 @@ synonym: "acellular anatomical structures" EXACT PLURAL [] xref: CARO:0000040 xref: TAO:0000382 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0000383 @@ -4489,9 +4490,9 @@ synonym: "lateral recti" EXACT PLURAL [] synonym: "posterior rectus" EXACT [ZFIN:ZDB-PUB-970121-6] xref: TAO:0000383 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000384 @@ -4502,8 +4503,8 @@ synonym: "levators arcus palatini" EXACT PLURAL [] xref: TAO:0000384 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000385 @@ -4512,9 +4513,9 @@ namespace: zebrafish_anatomy def: "The lymphatic system consists of blind-ended vessels, fluid and macromolecules collected from interstitial tissue space that serve as a conduit for the development and transport of lymphoid cells." [ZFIN:ZDB-PUB-130322-28] xref: TAO:0000385 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000386 @@ -4526,9 +4527,9 @@ synonym: "sensory macula" EXACT [] synonym: "sensory patch" EXACT [] xref: TAO:0000386 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000387 @@ -4541,9 +4542,9 @@ synonym: "nucleus motorius of nervi vagi" EXACT [] synonym: "nX" EXACT [] synonym: "vagal lobe" RELATED [] is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000297 ! vagal lobe -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000388 @@ -4554,9 +4555,9 @@ synonym: "caudal lobe of cerebellum" EXACT [] synonym: "lobus caudalis cerebelli" EXACT [] xref: TAO:0000388 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000307 ! vestibulolateralis lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000389 @@ -4564,9 +4565,9 @@ name: medial funicular nucleus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000389 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000390 @@ -4576,8 +4577,8 @@ def: "Preglomerular nucleus which is located between the lateral and caudal preg synonym: "medial preglomerular nuclei" EXACT PLURAL [] xref: TAO:0000390 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000391 @@ -4590,9 +4591,9 @@ synonym: "medial zone of D" EXACT [] synonym: "medial zone of dorsal telencephalic area" EXACT [] xref: TAO:0000391 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000392 @@ -4601,9 +4602,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure which is part of the hypothalamus and consists of caudal and ventral zones, and is separated from the dorsal hypothalamic zone by a deep ventral sulcus. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000392 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000393 @@ -4612,8 +4613,8 @@ namespace: zebrafish_anatomy def: "A mesh-like cell arrangement, less compact than an epithelium." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000393 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000394 @@ -4622,9 +4623,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is the outermost layer of the corpus cerebelli and consists largely of axons and dendrites. Other cell types such as stellate and basket neurons are also found in the molecular layer." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000394 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000395 @@ -4635,9 +4636,9 @@ subset: cell_slim synonym: "muscle pioneers somite 2" EXACT PLURAL [] xref: TAO:0000395 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000396 @@ -4646,8 +4647,8 @@ namespace: zebrafish_anatomy def: "A regulatory system of the body that consists of neurons and neuroglial cells. The nervous system is divided into two parts, the central nervous system (CNS) and the peripheral nervous system (PNS)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000396 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000397 @@ -4656,9 +4657,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is part of the caudal tuberculum. In trout the nucleus subglomerulosis receives gustatory information." [GOC:cvs, GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-2244-7917, PMID:11923003] xref: TAO:0000397 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000398 @@ -4667,9 +4668,9 @@ namespace: zebrafish_anatomy def: "The nucleus isthmi is a hindbrain nucleus located in the tegmentum of rhombomere 1 close to the secondary gustatory nucleus. It projects to and receives excitatory visual input from the ipsilateral optic tectum and the parvocellular and/or magnocellular superficial pretectal nucleus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100601-20] xref: TAO:0000398 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000399 @@ -4679,21 +4680,21 @@ def: "Nucleus that lies rostral to the isthmic primary nucleus." [ZFIN:ZDB-PUB-9 synonym: "secondary gustatory nucleus trigeminal nuclei" EXACT PLURAL [] xref: TAO:0000399 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000400 name: occipital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "supratemporal lateral line" EXACT [] xref: TAO:0000400 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000401 @@ -4703,9 +4704,9 @@ synonym: "cranial nerve VIII sensory nucleus" EXACT [] synonym: "octaval nerve sensory nuclei" EXACT PLURAL [] xref: TAO:0000401 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000402 @@ -4716,10 +4717,10 @@ synonym: "bulbus olfactorius" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "olfactory lobe" EXACT [] xref: TAO:0000402 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000403 @@ -4729,10 +4730,10 @@ def: "Female reproductive organ. The ovary is a bilobed cavitated organ located synonym: "ovaries" EXACT PLURAL [] xref: TAO:0000403 is_a: ZFA:0000413 ! gonad -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000303 ! female organism relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000404 @@ -4741,9 +4742,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the synencephalon and is located adjacent to the caudal commissure. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000404 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000405 @@ -4755,9 +4756,9 @@ synonym: "occulomotor" EXACT [] synonym: "oculomotor nerve" EXACT [] xref: TAO:0000405 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000406 @@ -4767,9 +4768,9 @@ def: "Diencephalic nucleus that is part of the superficial pretectum. From Neuro synonym: "parvocellular superficial pretectal nuclei" EXACT PLURAL [] xref: TAO:0000406 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000687 ! superficial pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000407 @@ -4779,9 +4780,9 @@ def: "Anatomical cluster of paired dermal and endochondral bones that attaches t synonym: "pectoral girdles" EXACT PLURAL [] xref: TAO:0000407 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000408 @@ -4791,9 +4792,9 @@ def: "Diencephalic nucleus which is located between the ventral thalamus and the synonym: "periventricular nucleus of posterior tuberculum" EXACT [] xref: TAO:0000408 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000410 @@ -4803,9 +4804,9 @@ def: "Dermal bone that is part of the pectoral girdle and located ventral to the synonym: "postcleithra" EXACT PLURAL [] xref: TAO:0000410 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000411 @@ -4815,9 +4816,9 @@ def: "Is an otic epithelium that will mature into the posterior crista." [GOC:ym synonym: "posterior crista primordia" EXACT PLURAL [] xref: TAO:0000411 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000412 @@ -4828,8 +4829,8 @@ synonym: "posterior semicircular canal primordia" RELATED PLURAL [] synonym: "posterior semicircular canal primordium" RELATED [] xref: TAO:0000412 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000413 @@ -4841,10 +4842,10 @@ synonym: "mature gonad" RELATED [] xref: TAO:0000413 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0005272 ! immature gonad -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000632 ! reproductive system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000414 @@ -4853,9 +4854,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that is fated to become cephalic mesoderm." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000414 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0000415 @@ -4865,8 +4866,8 @@ def: "Sphincter at the junction of the esophagus and pneumatic duct." [GOC:cvs, synonym: "oesophagial sphincter" EXACT [] xref: TAO:0000415 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000416 @@ -4875,8 +4876,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become endoderm. Determined by fate mapping." [ZFIN:ZDB-PUB-961014-608] xref: TAO:0000416 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000417 @@ -4888,9 +4889,9 @@ synonym: "presumptive spinal cord neural plate" EXACT [] synonym: "presumptive spinal cord neural rod" EXACT [] xref: TAO:0000417 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0007015 ! posterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000418 @@ -4899,9 +4900,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the dorsal part of the diencephalon, caudal to the telencephalon, rostral to the midbrain optic tectum; the major sensory input to the pretectum is visual. From The Laboratory Fish." [GOC:mh, ISBN:0125296509, ORCiD:0000-0001-9114-8737] xref: TAO:0000418 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000419 @@ -4912,12 +4913,12 @@ synonym: "pterosphenoids" EXACT PLURAL [] xref: TAO:0000419 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001515 ! taenia marginalis posterior -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005482 ! prootic-pterosphenoid joint relationship: overlaps ZFA:0005560 ! parasphenoid-basioccipital joint relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000420 @@ -4926,8 +4927,8 @@ namespace: zebrafish_anatomy synonym: "renal arteries" EXACT PLURAL [] xref: TAO:0000420 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000421 @@ -4936,9 +4937,9 @@ namespace: zebrafish_anatomy def: "Reticular formation is a complex network of neurons and diffuse nuclei that extends from the spinal cord centrally along the length of the brain to the mesencephalon. It s a dense, almost impenetrable network of seemingly random scattered nerve cells. The reticular formation integrates sensory inputs." [ISBN:0865777101] xref: TAO:0000421 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000422 @@ -4949,10 +4950,10 @@ synonym: "retroarticulars" EXACT PLURAL [] xref: TAO:0000422 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0005904 ! retroarticular process -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005618 ! anguloarticular-retroarticular joint relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000423 @@ -4963,21 +4964,21 @@ synonym: "ACV" EXACT [] synonym: "rostral cardinal vein" EXACT [] xref: TAO:0000423 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000096 ! cardinal system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000424 name: opercular lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "opercular lateral lines" EXACT PLURAL [] xref: TAO:0000424 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000425 @@ -4990,9 +4991,9 @@ synonym: "rostral lateral line nerve" EXACT [] xref: TAO:0000425 is_a: ZFA:0000641 ! cranial nerve is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000426 @@ -5003,9 +5004,9 @@ synonym: "anterior parvocellular preoptic nucleus" EXACT [] synonym: "rostral parvocellular preoptic nuclei" EXACT PLURAL [] xref: TAO:0000426 is_a: ZFA:0001680 ! parvocellular preoptic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000427 @@ -5016,9 +5017,9 @@ synonym: "anterior thalamic nucleus" EXACT [] synonym: "nucleus anterior thalami" EXACT [] xref: TAO:0000427 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000653 ! dorsal thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000428 @@ -5028,10 +5029,10 @@ def: "Otolith organ comprised of the macula saccule and sagitta. The lagena is p synonym: "sacculus" EXACT [] xref: TAO:0000428 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005410 ! pars inferior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000429 @@ -5040,10 +5041,10 @@ namespace: zebrafish_anatomy def: "The scaphium is a modification of NA 1 in which the neural arch is reduced and fused to a cup-shaped ossification of membrane bone, the concha. The second Weberian ossicle, consisting of three parts: the concha, the ascending process, and the articulating process." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000429 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001167 ! vertebra 1 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000430 @@ -5052,10 +5053,10 @@ namespace: zebrafish_anatomy def: "White matter connecting the primary gustatory nuclei to the secondary gustatory nucleus in the isthmus." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000430 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000431 @@ -5067,9 +5068,9 @@ synonym: "semicircular canals" EXACT PLURAL [] synonym: "semicircular duct" EXACT [] xref: TAO:0000431 is_a: ZFA:0007114 ! anatomical conduit -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005409 ! pars superior ear -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000433 @@ -5079,9 +5080,9 @@ synonym: "NVs" RELATED [] synonym: "sensory trigeminal nuclei" EXACT PLURAL [] xref: TAO:0000433 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000434 @@ -5089,8 +5090,8 @@ name: skeletal system namespace: zebrafish_anatomy xref: TAO:0000434 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000435 @@ -5102,9 +5103,9 @@ synonym: "optic" EXACT [] synonym: "optic nerve" EXACT [] xref: TAO:0000435 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000338 ! diencephalic white matter -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000436 @@ -5113,11 +5114,11 @@ namespace: zebrafish_anatomy def: "Organ that filters the blood removing defective blood cells. The spleen is a dark red organ, located in the peritoneal cavity, adjacent to one of the liver lobes. The spleen consists of red pulp composed of erythrocytes and thrombocytes and white pulp, composed of macrophages, reticular cells and reticulin fibers." [ZFIN:ZDB-PUB-110609-55] xref: TAO:0000436 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0005023 ! hematopoietic system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000437 @@ -5137,9 +5138,9 @@ synonym: "parhyural" EXACT [] synonym: "phy" EXACT [] xref: TAO:0000438 is_a: ZFA:0000859 ! specialized hemal arch and spine -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000557 ! preural 1 vertebra -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000439 @@ -5150,9 +5151,9 @@ synonym: "abductor superficialis pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "superficial pelvic abductors" EXACT PLURAL [] xref: TAO:0000439 is_a: ZFA:0005269 ! abductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000440 @@ -5164,9 +5165,9 @@ synonym: "anterior raphe nucleus" EXACT [] synonym: "dorsal raphe nucleus" RELATED [] xref: TAO:0000440 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001429 ! raphe nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000441 @@ -5175,9 +5176,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the preoptic area and is ventrolateral to the caudal parvocellular preoptic nucleus. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000441 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000442 @@ -5187,22 +5188,22 @@ def: "Supraneurals independent, median, elongate, rod-like cartilages or bones i synonym: "sn" EXACT [] xref: TAO:0000442 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000443 name: supraorbital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:JCN 421-\:189-198] +def: "One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "supraorbital lateral lines" EXACT PLURAL [] synonym: "supraorbital line" EXACT [ZFIN:ZDB-PUB-000523-3] xref: TAO:0000443 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000444 @@ -5212,9 +5213,9 @@ synonym: "hyopalatine" EXACT [] synonym: "suspensoria" EXACT [] xref: TAO:0000444 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000445 @@ -5230,9 +5231,9 @@ synonym: "tectum opticum" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000445 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000446 @@ -5240,8 +5241,8 @@ name: tecto-bulbar tract namespace: zebrafish_anatomy xref: TAO:0000446 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000447 @@ -5251,9 +5252,9 @@ def: "Portion of tissue that is part of the primitive meninx which forms a fold, synonym: "tela choroidea" RELATED [] xref: TAO:0000447 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001355 ! primitive meninx -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000448 @@ -5262,10 +5263,10 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located ventral to the medial preglomerular nucleus in the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000448 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000449 @@ -5277,9 +5278,9 @@ synonym: "tori longitudinalis" EXACT PLURAL [] xref: TAO:0000449 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000450 @@ -5289,9 +5290,9 @@ synonym: "motor nucleus IV" EXACT [] synonym: "nIV" EXACT [] xref: TAO:0000450 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000451 @@ -5302,12 +5303,12 @@ synonym: "breathing valve" RELATED [] synonym: "buccal valve" RELATED [] synonym: "maxillary valve" EXACT [] synonym: "upper internal lip" RELATED [ZFIN:ZDB-PUB-060921-12] -synonym: "upper semilunar valve " EXACT [ZFIN:ZDB-PUB-060921-12] +synonym: "upper semilunar valve" EXACT [ZFIN:ZDB-PUB-060921-12] xref: TAO:0000451 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000452 @@ -5316,11 +5317,11 @@ namespace: zebrafish_anatomy def: "The urohyal is a median dermal bone that ossifies in the membrane between the paired sternohyoideus muscles ventral to the anterior end of copula 1. It is an unpaired ossification of the tendon of the sternohyoideos muscles in basal teleosts, and it is paired in catfishes (Arratia and Schultze, 1990)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000452 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005457 ! dorsal hypohyal-urohyal joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000453 @@ -5332,9 +5333,9 @@ synonym: "vagal nerve" EXACT [] synonym: "vagus nerve" EXACT [] xref: TAO:0000453 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000454 @@ -5343,9 +5344,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the central pretectum and is ventromedial to the magnocellular superficial pretectal nucleus and the caudal pretectal nucleus. The ventral accessory optic nucleus is very large in zebrafish as compared to other cyprinids. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000454 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000455 @@ -5357,9 +5358,9 @@ synonym: "flexor caudalis ventralis superioris" EXACT [] synonym: "ventral flexor" RELATED [] xref: TAO:0000455 is_a: ZFA:0005271 ! flexor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000456 @@ -5371,8 +5372,8 @@ synonym: "ventral division of ventral telencephalic area" RELATED [] synonym: "ventral nucleus of V" EXACT [] xref: TAO:0000456 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000457 @@ -5384,9 +5385,9 @@ synonym: "inferior rectus" EXACT [ZFIN:ZDB-PUB-110512-18] synonym: "ventral recti" EXACT PLURAL [] xref: TAO:0000457 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000458 @@ -5395,9 +5396,9 @@ namespace: zebrafish_anatomy synonym: "prethalamus" EXACT [ZFIN:ZDB-PUB-060207-11] xref: TAO:0000458 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001215 ! thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000459 @@ -5405,9 +5406,9 @@ name: ventromedial thalamic nucleus namespace: zebrafish_anatomy xref: TAO:0000459 is_a: ZFA:0005576 ! ventral thalamus nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000460 @@ -5424,9 +5425,9 @@ def: "A group of modified neural arches and spines of the first four vertebrae. synonym: "Weberian ossicles" EXACT PLURAL [] xref: TAO:0000461 is_a: ZFA:0001491 ! solid compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000462 @@ -5437,9 +5438,9 @@ synonym: "abductors hyohyoid" EXACT PLURAL [] synonym: "hyohyoideus abductor" EXACT [] xref: TAO:0000462 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007052 ! hyohyoideus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000463 @@ -5448,20 +5449,20 @@ namespace: zebrafish_anatomy synonym: "adductors" EXACT PLURAL [] xref: TAO:0000463 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000464 name: otic lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "otic lateral lines" EXACT PLURAL [] xref: TAO:0000464 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000465 @@ -5472,8 +5473,8 @@ synonym: "adductor opercula" EXACT [] synonym: "adductor operculae" EXACT PLURAL [] xref: TAO:0000465 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000466 @@ -5484,9 +5485,9 @@ synonym: "anal depressors" EXACT PLURAL [] synonym: "depressores anales" RELATED [ZFIN:ZDB-PUB-171118-8] xref: TAO:0000466 is_a: ZFA:0005270 ! depressor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000467 @@ -5499,11 +5500,11 @@ is_a: ZFA:0001590 ! dermal bone is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001644 ! articular cartilage relationship: develops_from ZFA:0001645 ! angular bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005618 ! anguloarticular-retroarticular joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000468 @@ -5513,9 +5514,9 @@ def: "Is an otic epithelium that will mature into the anterior crista." [GOC:ymb synonym: "anterior crista primordia" EXACT PLURAL [] xref: TAO:0000468 is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000469 @@ -5526,8 +5527,8 @@ synonym: "anterior semicircular canal primordia" RELATED PLURAL [] synonym: "anterior semicircular canal primordium" RELATED [] xref: TAO:0000469 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000470 @@ -5539,9 +5540,9 @@ synonym: "area preoptica" EXACT [] synonym: "preoptic region" EXACT [] xref: TAO:0000470 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000471 @@ -5551,9 +5552,9 @@ def: "Cavitated compound organ that receives inflow of deoxygenated blood and de xref: TAO:0000471 is_a: ZFA:0001490 ! cavitated compound organ relationship: develops_from ZFA:0001718 ! presumptive atrium heart tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000472 @@ -5563,14 +5564,14 @@ def: "Large median unpaired cartilage bone that contacts the exoccipital, epioti xref: TAO:0000472 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005423 ! basioccipital-exoccipital joint relationship: overlaps ZFA:0005560 ! parasphenoid-basioccipital joint relationship: overlaps ZFA:0005613 ! basioccipital-prootic joint relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000473 @@ -5580,8 +5581,8 @@ def: "Muscle system in the trunk." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "body musculature" EXACT [] xref: TAO:0000473 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000474 @@ -5591,9 +5592,9 @@ def: "Small membrane bone homologous with a cartilage bone in more basal fishes synonym: "opisthotic" EXACT [] xref: TAO:0000474 is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000189 ! otic region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000475 @@ -5603,9 +5604,9 @@ def: "Diencephalic nucleus which is located anterior to the caudal tuberal nucle synonym: "PVO" EXACT [] xref: TAO:0000475 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000476 @@ -5615,12 +5616,12 @@ def: "Dermal bone that is a bilaterally paired and flattened element that suppor synonym: "branchiostegal rays" EXACT PLURAL [] xref: TAO:0000476 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005465 ! ceratohyal-branchiostegal ray joint relationship: overlaps ZFA:0005498 ! epihyal-branchiostegal ray joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000477 @@ -5634,11 +5635,11 @@ synonym: "postcardinal vein" EXACT [] xref: TAO:0000477 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005077 ! vascular cord -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000096 ! cardinal system relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005295 ! axial blood vessel -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000479 @@ -5648,10 +5649,10 @@ def: "Brainstem tract which carries cerebellar afferents from the dorsal tegment synonym: "posterior mesencephalo-cerebellar tract" EXACT [] xref: TAO:0000479 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000643 ! rostral cerebellar tract relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000480 @@ -5661,8 +5662,8 @@ def: "Hindbrain nucleus which is part of the medulla oblongata and is a mechanor synonym: "nucleus octavolateralis caudalis" EXACT [] xref: TAO:0000480 is_a: ZFA:0000381 ! lateral line sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000481 @@ -5672,8 +5673,8 @@ def: "Preglomerular nucleus which is the most caudomedial of the preglomerular n synonym: "nucleus praeglomerulosus caudalis" EXACT [] xref: TAO:0000481 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000482 @@ -5683,9 +5684,9 @@ def: "Diencephalic nucleus which is located posterior to the paraventricular org synonym: "posterior tuberal nucleus" EXACT [] xref: TAO:0000482 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000484 @@ -5694,8 +5695,8 @@ namespace: zebrafish_anatomy synonym: "coeliac-mesenteric artery" EXACT [] xref: TAO:0000484 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000485 @@ -5707,9 +5708,9 @@ synonym: "central nucleus of the inferior lobe" EXACT [] synonym: "nucleus centralis lobi inferioris hypothalami" EXACT [] xref: TAO:0000485 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000165 ! inferior lobe -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000486 @@ -5719,7 +5720,7 @@ def: "Paired dermal bone that covers the hind part of the cranium, overlapping t synonym: "post parietal" EXACT [] xref: TAO:0000486 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005607 ! inter-parietal joint relationship: overlaps ZFA:0005608 ! frontal-parietal joint relationship: overlaps ZFA:0005609 ! supraoccipital-parietal joint @@ -5728,7 +5729,7 @@ relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000487 @@ -5740,9 +5741,9 @@ synonym: "central zone of D" EXACT [] synonym: "Dc" EXACT [ZFIN:ZDB-PUB-150226-6] xref: TAO:0000487 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000488 @@ -5752,9 +5753,9 @@ def: "Endochondral bone that is bilaterally paired and forms part of the ventral synonym: "ceratobranchial bones" EXACT PLURAL [] xref: TAO:0000488 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000490 @@ -5764,8 +5765,8 @@ def: "Cerebellar commissure which is located within the ventral boundary zone be synonym: "cerebellar commissure" EXACT [] xref: TAO:0000490 is_a: ZFA:0001708 ! cerebellar white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000491 @@ -5778,8 +5779,8 @@ synonym: "CPT" RELATED [ZFIN:ZDB-PUB-961014-1268] synonym: "Ctub" RELATED [ZFIN:ZDB-PUB-120424-30] xref: TAO:0000491 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000492 @@ -5787,9 +5788,9 @@ name: coracoradialis namespace: zebrafish_anatomy xref: TAO:0000492 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000493 @@ -5797,9 +5798,9 @@ name: decussation of medial funicular nucleus namespace: zebrafish_anatomy xref: TAO:0000493 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000494 @@ -5808,9 +5809,9 @@ namespace: zebrafish_anatomy synonym: "deep white zones" EXACT PLURAL [] xref: TAO:0000494 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000495 @@ -5820,9 +5821,9 @@ def: "Plate like dermal bone with usually only one neuromast pore (Nelson, 1969) synonym: "dermosphenotic" EXACT [] xref: TAO:0000495 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0000496 @@ -5833,9 +5834,9 @@ synonym: "organ" EXACT [] xref: CARO:0000024 xref: TAO:0000496 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000497 @@ -5846,23 +5847,23 @@ synonym: "adductor profundus pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "pelvic adductors profundus" EXACT PLURAL [] xref: TAO:0000497 is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000498 name: dilatator operculi namespace: zebrafish_anatomy def: "Mandibular muscle that inserts along the dorsolateral faces of the opercles. Responsible for opercular abduction." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-020703-2, ZFIN:ZDB-PUB-080306-33] -synonym: " dilatator opercula" EXACT [] +synonym: "dilatator opercula" EXACT [] synonym: "dilator opercula" RELATED [] synonym: "dilators operculi" RELATED PLURAL [] xref: TAO:0000498 is_a: ZFA:0000236 ! mandibular muscle relationship: develops_from ZFA:0007050 ! constrictor dorsalis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000499 @@ -5875,8 +5876,8 @@ synonym: "dorsal arrectors" EXACT PLURAL [] xref: TAO:0000499 is_a: ZFA:0005275 ! arrector muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000500 @@ -5887,9 +5888,9 @@ synonym: "dorsal erectors" EXACT PLURAL [] synonym: "erector dorsalis" EXACT [] xref: TAO:0000500 is_a: ZFA:0005267 ! erector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000501 @@ -5898,9 +5899,9 @@ namespace: zebrafish_anatomy synonym: "funiculus dorsalis" EXACT [] xref: TAO:0000501 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000502 @@ -5909,8 +5910,8 @@ namespace: zebrafish_anatomy def: "Trigeminal motor nucleus that is located dorsal to the lateral longitudinal fascicle." [ISBN:3764351209] xref: TAO:0000502 is_a: ZFA:0001365 ! trigeminal motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000503 @@ -5919,8 +5920,8 @@ namespace: zebrafish_anatomy synonym: "dorsal oblique branchial muscles" EXACT PLURAL [] xref: TAO:0000503 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000504 @@ -5929,8 +5930,8 @@ namespace: zebrafish_anatomy synonym: "dorsal retractors" EXACT PLURAL [] xref: TAO:0000504 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000505 @@ -5943,9 +5944,9 @@ synonym: "dorsal telencephalic area" EXACT [] synonym: "pallium" EXACT [] xref: TAO:0000505 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000506 @@ -5958,9 +5959,9 @@ synonym: "dorsal zone of D" EXACT [] synonym: "dorsal zone of dorsal telencephalic area" EXACT [] xref: TAO:0000506 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000507 @@ -5970,8 +5971,8 @@ def: "Some or all epineural bones ossify free from the neural arches in most tel synonym: "epineurals" EXACT PLURAL [] xref: TAO:0000507 is_a: ZFA:0000526 ! intermuscular bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000508 @@ -5981,9 +5982,9 @@ def: "Internal skeletal supports of the pelvic fin." [TAO:curator] synonym: "pelvic radials" EXACT PLURAL [] xref: TAO:0000508 is_a: ZFA:0000271 ! radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000509 @@ -5992,9 +5993,9 @@ namespace: zebrafish_anatomy def: "Brain structure which is part of the diencephalon and consists of the dorsal and ventral nuclei of the habenula, and two dorsal outgrowths, the epiphysis and the saccus dorsalis. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] xref: TAO:0000509 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000510 @@ -6003,8 +6004,8 @@ namespace: zebrafish_anatomy synonym: "external levators" EXACT PLURAL [] xref: TAO:0000510 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000511 @@ -6014,8 +6015,8 @@ def: "Muscle system surrounding the eye. The extraocular musculature is derived synonym: "ocular musculature" RELATED [] xref: TAO:0000511 is_a: ZFA:0000328 ! cephalic musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000512 @@ -6024,12 +6025,12 @@ namespace: zebrafish_anatomy def: "Hindbrain nucleus that doesn't project to the spinal cord." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-970218-12] synonym: "lobus facialis" EXACT [] synonym: "LVII" EXACT [ZFIN:ZDB-PUB-961014-1280] -synonym: "tuberculum impar of Herrick " RELATED [] +synonym: "tuberculum impar of Herrick" RELATED [] xref: TAO:0000512 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000513 @@ -6041,9 +6042,9 @@ synonym: "fast muscle cells somite 1" EXACT PLURAL [] synonym: "fast muscle fiber somite 1" EXACT [] xref: TAO:0000513 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000514 @@ -6052,7 +6053,7 @@ namespace: zebrafish_anatomy def: "Large elongated paired dermal bones that roof the cranium and bear part of the supraorbital canal. The frontal bones cover the upper edge of the lateral ethmoid, orbitosphenoid and pterosphenoids and overlaps the parietal bone posteriorly." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000514 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005468 ! frontal-pterotic joint relationship: overlaps ZFA:0005472 ! inter-frontal joint relationship: overlaps ZFA:0005608 ! frontal-parietal joint @@ -6060,7 +6061,7 @@ relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000516 @@ -6080,9 +6081,9 @@ xref: TAO:0000516 xref: TAO:0001352 is_a: ZFA:0001477 ! portion of tissue is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000517 @@ -6091,9 +6092,9 @@ namespace: zebrafish_anatomy synonym: "lobus glossopharyngei" EXACT [] xref: TAO:0000517 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000518 @@ -6104,9 +6105,9 @@ synonym: "central gray" EXACT [] synonym: "central grey" EXACT [] xref: TAO:0000518 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000519 @@ -6118,9 +6119,9 @@ synonym: "ventral arcocentrum" EXACT [] xref: TAO:0000519 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001361 ! basiventral -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000326 ! caudal vertebra -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000520 @@ -6128,8 +6129,8 @@ name: horizontal commissure namespace: zebrafish_anatomy xref: TAO:0000520 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000521 @@ -6139,10 +6140,10 @@ def: "Muscles that insert into skeletal elements of pharyngeal arch 2 (hyoid arc synonym: "hyoid muscles" EXACT PLURAL [] xref: TAO:0000521 is_a: ZFA:0001652 ! head muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001307 ! pharyngeal musculature relationship: part_of ZFA:0001611 ! pharyngeal arch 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000522 @@ -6153,9 +6154,9 @@ synonym: "hyohyoideus inferior" RELATED [] synonym: "inferior hyohyoids" EXACT PLURAL [] xref: TAO:0000522 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007052 ! hyohyoideus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000523 @@ -6163,21 +6164,21 @@ name: inferior reticular formation namespace: zebrafish_anatomy xref: TAO:0000523 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000542 ! medial column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000524 name: infraorbital lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:] +def: "One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-000523-3] synonym: "infraorbital line" EXACT [] xref: TAO:0000524 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000525 @@ -6186,10 +6187,10 @@ namespace: zebrafish_anatomy def: "Third Weberian ossicle. The intercalarium is a Y- or T-shaped modification of neural arch 2 in which an anteriolateral process (the manubrium) is embedded in the interossicular ligament; other parts include the ascending and articulating processes." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0000525 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001168 ! vertebra 2 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000526 @@ -6199,9 +6200,9 @@ def: "Axial bone which is a segmental ossification that forms in the myoseptum; synonym: "intermuscular bones" EXACT PLURAL [] xref: TAO:0000526 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000527 @@ -6212,9 +6213,9 @@ synonym: "infrapharyngobranchial" EXACT [] synonym: "pharyngobranchials" EXACT [] xref: TAO:0000527 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000528 @@ -6226,9 +6227,9 @@ synonym: "interradiali" EXACT PLURAL [] synonym: "interradialis" EXACT [] xref: TAO:0000528 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000628 ! caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000529 @@ -6238,11 +6239,11 @@ def: "Cavitated compound organ located in the pleuroperitoneal cavity where hema synonym: "mesonephros" EXACT [] xref: TAO:0000529 is_a: ZFA:0001490 ! cavitated compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000163 ! renal system relationship: part_of ZFA:0001159 ! immune system relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000530 @@ -6255,9 +6256,9 @@ synonym: "utricular otolith" EXACT [] synonym: "utriculith" EXACT [] xref: TAO:0000530 is_a: ZFA:0001617 ! otolith -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000700 ! utricle -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000531 @@ -6266,9 +6267,9 @@ namespace: zebrafish_anatomy synonym: "lateral columns" EXACT PLURAL [] xref: TAO:0000531 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000421 ! reticular formation -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000532 @@ -6279,9 +6280,9 @@ synonym: "lateral division" EXACT [] synonym: "valvula cerebelli, pars lateralis" EXACT [] xref: TAO:0000532 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000533 @@ -6290,9 +6291,9 @@ namespace: zebrafish_anatomy synonym: "lateral funiculi" EXACT PLURAL [] xref: TAO:0000533 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000534 @@ -6306,9 +6307,9 @@ synonym: "lateral longitundinal fasciculus" EXACT [] synonym: "LLF" RELATED [] xref: TAO:0000534 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000535 @@ -6317,9 +6318,9 @@ namespace: zebrafish_anatomy synonym: "lateral reticular nuclei" EXACT PLURAL [] xref: TAO:0000535 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000531 ! lateral column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000536 @@ -6332,9 +6333,9 @@ synonym: "lateral zone of D" EXACT [] synonym: "lateral zone of dorsal telencephalic area" EXACT [] xref: TAO:0000536 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000537 @@ -6344,8 +6345,8 @@ def: "Hyoid muscle that originates at the ventrolateral margin of the pterotic a synonym: "levator operculae" EXACT [] xref: TAO:0000537 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000538 @@ -6356,9 +6357,9 @@ synonym: "dorsal rib" EXACT [] synonym: "pleural rib" EXACT [] xref: TAO:0000538 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000539 @@ -6369,9 +6370,9 @@ comment: Sometimes considered part of the reticular formation. synonym: "loci coeruleus" EXACT PLURAL [] xref: TAO:0000539 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000540 @@ -6380,8 +6381,8 @@ namespace: zebrafish_anatomy synonym: "magnocellular octaval nuclei" EXACT PLURAL [] xref: TAO:0000540 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000541 @@ -6392,8 +6393,8 @@ subset: cell_slim synonym: "marginal blastomeres" EXACT PLURAL [] xref: TAO:0000541 is_a: ZFA:0000093 ! blastomere -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000005 ! Cleavage:16-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000005 ! cleavage:16-cell [Term] id: ZFA:0000542 @@ -6403,9 +6404,9 @@ synonym: "medial column of the reticular formation" EXACT [] synonym: "medial columns" EXACT PLURAL [] xref: TAO:0000542 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000421 ! reticular formation -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000543 @@ -6415,8 +6416,8 @@ def: "The medial longitudinal fasciculus (MLF) is a pair of crossed fiber tracts synonym: "MLF" RELATED [] xref: TAO:0000543 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000544 @@ -6432,10 +6433,10 @@ namespace: zebrafish_anatomy def: "Brain structure that is located ventrocaudal to the cerebellum and just anterior to the spinal cord and contains the sensory and motor nuclei of six cranial nerves. In zebrafish, with the exception of the cerebellum, the ventral remainder of the metencephalon can be separated only arbitrarily from the more caudal myelencephalic portion of the medulla oblongata." [ISBN:3764351209] xref: TAO:0000545 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000546 @@ -6446,9 +6447,9 @@ synonym: "renal duct" RELATED [] synonym: "Wolffian duct" RELATED [] xref: TAO:0000546 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000163 ! renal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000547 @@ -6457,10 +6458,10 @@ namespace: zebrafish_anatomy xref: TAO:0000547 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0001290 ! stomodeum -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000548 @@ -6469,24 +6470,24 @@ namespace: zebrafish_anatomy def: "Anatomical system consisting of the cardiac, skeletal and smooth muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000548 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000549 name: posttemporal namespace: zebrafish_anatomy def: "Paired fin bone that attaches the pectoral girdle to the skull via two projections contacting the epiotic and intercalar bones, and carry the main laterosensory canal." [GOC:mh, ORCiD:0000-0001-9114-8737] -synonym: "post-temporal " RELATED [] +synonym: "post-temporal" RELATED [] synonym: "postemporal" EXACT [] xref: TAO:0000549 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005889 ! epiotic-posttemporal joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000407 ! pectoral girdle relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000550 @@ -6497,10 +6498,10 @@ synonym: "nares" EXACT PLURAL [] synonym: "nostril" EXACT [] xref: TAO:0000550 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000551 @@ -6509,9 +6510,9 @@ namespace: zebrafish_anatomy def: "Hindbrain nucleus in the tegmental region of rhombomere 1. The cells of the nucleus are granular and lie at the ventral border of the cerebellum and brain stem." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100601-20, ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000551 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000552 @@ -6521,9 +6522,9 @@ def: "Nucleus located in the midbrain tegmentum that controls motor coordination synonym: "red nucleus" EXACT [] xref: TAO:0000552 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000553 @@ -6533,9 +6534,9 @@ synonym: "motor nucleus III" EXACT [] synonym: "nIII" EXACT [] xref: TAO:0000553 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000554 @@ -6547,9 +6548,9 @@ synonym: "nasal sensory epithelium" EXACT [] xref: TAO:0000554 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0001431 ! primitive olfactory epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000555 @@ -6563,8 +6564,8 @@ synonym: "opercular cover" RELATED [ZFIN:ZDB-PUB-030304-18] synonym: "operculum" EXACT [] xref: TAO:0000555 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000556 @@ -6575,8 +6576,8 @@ synonym: "chiasma opticum" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "optic commissure" EXACT [] xref: TAO:0000556 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000557 @@ -6589,8 +6590,8 @@ synonym: "pu1" EXACT [] synonym: "second last vertebra" EXACT [] xref: TAO:0000557 is_a: ZFA:0000734 ! preural vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000558 @@ -6602,9 +6603,9 @@ synonym: "posterior sensory patch" EXACT [] synonym: "posteromedial macula" EXACT [] xref: TAO:0000558 is_a: ZFA:0000386 ! macula -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001671 ! macula communis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000559 @@ -6614,9 +6615,9 @@ def: "Cavitated compound organ that is a fluid filed chamber with a maculae on synonym: "otolith organs" EXACT PLURAL [] xref: TAO:0000559 is_a: ZFA:0001490 ! cavitated compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000560 @@ -6626,10 +6627,10 @@ def: "Duct that connects ovary with cloacal chamber. In zebrafish the oviduct i synonym: "oviducts" EXACT PLURAL [] xref: TAO:0000560 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000303 ! female organism relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000561 @@ -6638,14 +6639,14 @@ namespace: zebrafish_anatomy def: "Long, unpaired median dermal bone that runs almost the entire length of the cranium. Contacts the prevomer anteriorly, and the prootic and basioccipital posteriorly. Anteriorly the parasphenoid is a long, thin bone that widens abruptly at the point of contact with the prootic." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000561 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005509 ! palate -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000563 @@ -6656,10 +6657,10 @@ synonym: "pectoral fin muscle" RELATED [] xref: TAO:0000563 is_a: ZFA:0000207 ! fin musculature relationship: develops_from ZFA:0001000 ! mesenchyme pectoral fin -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005924 ! middle migratory muscle precursor stream relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000564 @@ -6670,9 +6671,9 @@ synonym: "abductor profundus pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "pelvic abductors profundus" EXACT PLURAL [] xref: TAO:0000564 is_a: ZFA:0005269 ! abductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000565 @@ -6682,9 +6683,9 @@ def: "Anatomical cluster that consists of the paired basipterygia which support synonym: "pelvic girdles" EXACT PLURAL [] xref: TAO:0000565 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000566 @@ -6701,9 +6702,9 @@ synonym: "posterior semicircular canal sensory patches" EXACT PLURAL [] xref: TAO:0000566 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000411 ! posterior crista primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000567 @@ -6713,11 +6714,11 @@ def: "The premaxilla is a bone of the upper jaw. It is an L-shaped bone first vi synonym: "premaxillae" EXACT PLURAL [] xref: TAO:0000567 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005475 ! inter-premaxillary joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000568 @@ -6726,8 +6727,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become blood. Determined by marker expression." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000568 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000569 @@ -6737,10 +6738,10 @@ def: "Embryonic structure that gives rise to the hindbrain." [GOC:mh, ORCiD:0000 synonym: "presumptive rhombencephalon" EXACT [] xref: TAO:0000569 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007015 ! posterior presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0000570 @@ -6751,9 +6752,9 @@ def: "Portion of tissue that is part of the anterior neural keel and will form t synonym: "eye field" EXACT [] xref: TAO:0000570 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0000571 @@ -6762,9 +6763,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the telencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000571 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000573 @@ -6774,9 +6775,9 @@ def: "Portion of tissue which is the innermost layer of the olfactory bulb. From synonym: "stratum cellulare internum bulbi olfactorii" EXACT [] xref: TAO:0000573 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000574 @@ -6785,9 +6786,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the diencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000574 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000575 @@ -6800,14 +6801,14 @@ is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: develops_from ZFA:0001425 ! basal plate cartilage relationship: develops_from ZFA:0001500 ! auditory capsule -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005887 ! posterior basicapsular commissure relationship: overlaps ZFA:0005482 ! prootic-pterosphenoid joint relationship: overlaps ZFA:0005613 ! basioccipital-prootic joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000576 @@ -6818,13 +6819,13 @@ synonym: "autopterotic" EXACT [] xref: TAO:0000576 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001500 ! auditory capsule -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005468 ! frontal-pterotic joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000577 @@ -6834,9 +6835,9 @@ def: "Afferent vein that supplies the kidney." [GOC:cvs, ISBN:9781118222942, ORC synonym: "renal portal veins" EXACT PLURAL [] xref: TAO:0000577 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000578 @@ -6849,14 +6850,14 @@ synonym: "rostral ceratohyal" EXACT [] xref: TAO:0000578 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005465 ! ceratohyal-branchiostegal ray joint relationship: overlaps ZFA:0005466 ! ceratohyal-ventral hypohyal joint relationship: overlaps ZFA:0005467 ! ceratohyal-dorsal hypohyal joint relationship: overlaps ZFA:0005497 ! epihyal-ceratohyal joint relationship: overlaps ZFA:0005859 ! ceratohyal-interhyal joint relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000579 @@ -6866,10 +6867,10 @@ def: "Brainstem tract which carries cerebellar afferents from the pretectum and synonym: "anterior mesencephalo-cerebellar tract" EXACT [] xref: TAO:0000579 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000643 ! rostral cerebellar tract relationship: part_of ZFA:0001707 ! brainstem -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000580 @@ -6880,8 +6881,8 @@ synonym: "anterior preglomerular nucleus" EXACT [] synonym: "nucleus praeglomerulosus anterior" EXACT [] xref: TAO:0000580 is_a: ZFA:0001662 ! preglomerular nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000581 @@ -6892,9 +6893,9 @@ synonym: "anterior tuberal nucleus" EXACT [] synonym: "nucleus tuberis anterior" EXACT [] xref: TAO:0000581 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000707 ! ventral hypothalamic zone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000582 @@ -6902,9 +6903,9 @@ name: saccus dorsalis namespace: zebrafish_anatomy xref: TAO:0000582 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000583 @@ -6915,9 +6916,9 @@ synonym: "scapulae" EXACT PLURAL [] xref: TAO:0000583 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001455 ! scapulocoracoid -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000585 @@ -6926,8 +6927,8 @@ namespace: zebrafish_anatomy def: "Cranial cartilage which is a small median cartilage located between the premaxillae and anterodorsal to the ethmoid." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000585 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000586 @@ -6940,8 +6941,8 @@ synonym: "pu2" EXACT [] synonym: "third last vertebra" EXACT [] xref: TAO:0000586 is_a: ZFA:0000734 ! preural vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000587 @@ -6953,11 +6954,11 @@ xref: TAO:0000587 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001506 ! tectum synoticum relationship: develops_from ZFA:0001515 ! taenia marginalis posterior -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000588 @@ -6966,16 +6967,16 @@ namespace: zebrafish_anatomy def: "The sensory ganglion of the ear. (See Anatomical Atlas entry for statoacoustic ganglion by T. Whitfield.)" [GOC:mh, ORCiD:0000-0001-9114-8737] synonym: "auditory ganglion" EXACT [] synonym: "gVIII" EXACT [] -synonym: "octaval ganglion " EXACT [] +synonym: "octaval ganglion" EXACT [] synonym: "sag" EXACT [] synonym: "statoacoustic ganglia" EXACT PLURAL [] xref: TAO:0000588 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0000138 ! otic placode relationship: develops_from ZFA:0000762 ! facio-acoustic neural crest -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000589 @@ -6984,9 +6985,9 @@ namespace: zebrafish_anatomy def: "Anatomical groove which separates the dorsal and medial zones of dorsal telencephalon. From Neuroanatomy of the Zebrafish Brain." [GOC:cvs, GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-2244-7917] xref: TAO:0000589 is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000505 ! dorsal telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000590 @@ -6995,9 +6996,9 @@ namespace: zebrafish_anatomy def: "Region of the head where the mouth and oral structures are located." [GOC:ymb, ORCid:0000-0002-9900-7880] xref: TAO:0000590 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000591 @@ -7006,8 +7007,8 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become paraxial mesoderm. Determined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000591 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000021 ! gastrula:90%-epiboly +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000592 @@ -7018,9 +7019,9 @@ synonym: "adductor superficialis pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "superficial pelvic adductors" EXACT PLURAL [] xref: TAO:0000592 is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000593 @@ -7029,9 +7030,9 @@ namespace: zebrafish_anatomy comment: There may be a cholinergic nucleus called the superior reticular nucleus rostral to the locus coeruleus, ZDB-PUB-040526-6. xref: TAO:0000593 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000542 ! medial column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000594 @@ -7041,9 +7042,9 @@ def: "Dermal bone that articulates dorsally with the posttemporal and ventrally synonym: "supracleithra" EXACT PLURAL [] xref: TAO:0000594 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000595 @@ -7053,13 +7054,13 @@ def: "Large shield-shaped unpaired median cartilage bone that contact the pariet xref: TAO:0000595 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001506 ! tectum synoticum -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005609 ! supraoccipital-parietal joint relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000596 @@ -7076,9 +7077,9 @@ def: "CNS white matter that is part of the telencephalon." [GOC:mh, ORCiD:0000-0 synonym: "telencephalic tract/commissure" EXACT [] xref: TAO:0000597 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000598 @@ -7088,23 +7089,23 @@ def: "Male reproductive organ. Adult zebrafish testes are paired organs forming synonym: "testes" EXACT PLURAL [] xref: TAO:0000598 is_a: ZFA:0000413 ! gonad -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000242 ! male organism relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000599 name: torus semicircularis namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the midbrain and develops from the alar plate. The torus semicircularis is located dorsal to the lateral tegmentum where it extends into the medial tectal ventricle and receives ascending sensory octavolateralis input." [GOC:mh, ORCiD:0000-0001-9114-8737] -synonym: "semicircular torus " EXACT [] +synonym: "semicircular torus" EXACT [] xref: TAO:0000599 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001357 ! alar plate midbrain region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000600 @@ -7116,9 +7117,9 @@ synonym: "trochlear" EXACT [] synonym: "trochlear nerve" EXACT [] xref: TAO:0000600 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000601 @@ -7129,10 +7130,10 @@ synonym: "periventricular pretectum" EXACT [] synonym: "pretectal periventricular nuclei" EXACT PLURAL [] xref: TAO:0000601 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon relationship: part_of ZFA:0000418 ! pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000602 @@ -7142,9 +7143,9 @@ def: "Neural arch that extends along the dorso-lateral surface of the last preur synonym: "uroneurals" EXACT PLURAL [] xref: TAO:0000602 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000603 @@ -7155,9 +7156,9 @@ synonym: "valvula" RELATED [] synonym: "valvula cerebellum" EXACT PLURAL [] xref: TAO:0000603 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000604 @@ -7166,8 +7167,8 @@ namespace: zebrafish_anatomy def: "Outflow artery from the heart to the aortic arches." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000604 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000605 @@ -7176,9 +7177,9 @@ namespace: zebrafish_anatomy synonym: "ventral funiculi" EXACT PLURAL [] xref: TAO:0000605 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000606 @@ -7187,8 +7188,8 @@ namespace: zebrafish_anatomy synonym: "ventral oblique branchial muscles" EXACT PLURAL [] xref: TAO:0000606 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000607 @@ -7197,19 +7198,19 @@ namespace: zebrafish_anatomy def: "Brainstem commissure that intersects the medial longitudinal fasciculus." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000607 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000608 name: ventral transverse namespace: zebrafish_anatomy synonym: "transverse ventralis" EXACT [] -synonym: "transversus ventralis " EXACT [] +synonym: "transversus ventralis" EXACT [] xref: TAO:0000608 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000609 @@ -7218,9 +7219,9 @@ namespace: zebrafish_anatomy def: "Midbrain nucleus which is part of the torus semicircularis and is the target of ascending octavolateralis systems related to mechanoreception. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000609 is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000599 ! torus semicircularis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000610 @@ -7230,8 +7231,8 @@ def: "Connective tissue partitions developing between the myotomes." [GOC:mh, OR synonym: "transverse myoseptum" EXACT [] xref: TAO:0000610 is_a: ZFA:0001089 ! myoseptum -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000611 @@ -7240,9 +7241,9 @@ namespace: zebrafish_anatomy def: "Collection of the visceromotor nuclei and their fiber tracts in the medulla oblongata." [ISBN:3540560130] xref: TAO:0000611 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000612 @@ -7254,8 +7255,8 @@ synonym: "protractor hyoideus" EXACT PLURAL [] synonym: "protractors hyoidei" EXACT PLURAL [] xref: TAO:0000612 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000614 @@ -7266,9 +7267,9 @@ synonym: "abductors profundus" EXACT PLURAL [] xref: TAO:0000614 is_a: ZFA:0005269 ! abductor muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000615 @@ -7278,8 +7279,8 @@ def: "Hyoid muscle that originates at the parasphenoid and inserts into the mesi synonym: "adductors arcus palatini" EXACT PLURAL [] xref: TAO:0000615 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000616 @@ -7290,9 +7291,9 @@ synonym: "adductors profundus" EXACT PLURAL [] xref: TAO:0000616 is_a: ZFA:0005268 ! adductor muscle relationship: develops_from ZFA:0005650 ! primitive pectoral fin adductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000617 @@ -7303,9 +7304,9 @@ synonym: "anal erectors" EXACT PLURAL [] synonym: "erectores anales" EXACT [ZFIN:ZDB-PUB-171118-8] xref: TAO:0000617 is_a: ZFA:0005267 ! erector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000618 @@ -7317,8 +7318,8 @@ synonym: "commissura ansulata" EXACT [] synonym: "ventral tegmental commissure" EXACT [] xref: TAO:0000618 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000619 @@ -7335,9 +7336,9 @@ synonym: "rostral crista" EXACT [] xref: TAO:0000619 is_a: ZFA:0007068 ! otic epithelium relationship: develops_from ZFA:0000468 ! anterior crista primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000620 @@ -7348,12 +7349,12 @@ synonym: "palatine" EXACT [] xref: TAO:0000620 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005420 ! autopalatine-lateral ethmoid joint relationship: overlaps ZFA:0005421 ! autopalatine-maxillary joint relationship: overlaps ZFA:0005422 ! autopalatine-vomer joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0000621 @@ -7364,11 +7365,11 @@ synonym: "quadrates" EXACT PLURAL [] xref: TAO:0000621 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001399 ! palatoquadrate cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005486 ! quadrate-metapterygoid joint relationship: overlaps ZFA:0005616 ! quadrate-entopterygoid joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000622 @@ -7379,10 +7380,10 @@ synonym: "barble" EXACT [] xref: TAO:0000622 is_a: ZFA:0000292 ! surface structure relationship: develops_from ZFA:0005119 ! barbel primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0000623 @@ -7394,10 +7395,10 @@ synonym: "pelvic girdle" RELATED [] xref: TAO:0000623 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001539 ! basipterygium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005471 ! inter-basipterygium joint relationship: part_of ZFA:0000565 ! pelvic girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000624 @@ -7415,8 +7416,8 @@ def: "Brainstem and spinal tract which emerges medial to the caudal intermediate synonym: "tractus bulbospinalis" EXACT [] xref: TAO:0000626 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000627 @@ -7428,11 +7429,11 @@ synonym: "posterior ceratohyal" EXACT [] xref: TAO:0000627 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005497 ! epihyal-ceratohyal joint relationship: overlaps ZFA:0005498 ! epihyal-branchiostegal ray joint relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000628 @@ -7441,9 +7442,9 @@ namespace: zebrafish_anatomy def: "Fin musculature that is part of the caudal fin. The musculature is composed of 12 muscles that are arranged in a superficial and a deep muscle layer. Nerve roots of spinal segments 27-31 supply the caudal fin muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-011008-1] xref: TAO:0000628 is_a: ZFA:0000207 ! fin musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000629 @@ -7454,8 +7455,8 @@ synonym: "nucleus nervi abducentis, pars caudalis" EXACT [] synonym: "nVIc" EXACT [] xref: TAO:0000629 is_a: ZFA:0000713 ! abducens motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000630 @@ -7466,9 +7467,9 @@ synonym: "caudal parvocellular preoptic nuclei" EXACT PLURAL [] synonym: "posterior parvocellular preoptic nucleus" EXACT [] xref: TAO:0000630 is_a: ZFA:0001680 ! parvocellular preoptic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000470 ! preoptic area -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000631 @@ -7479,9 +7480,9 @@ synonym: "caudal pretectal nuclei" EXACT PLURAL [] synonym: "posterior pretectal nucleus" EXACT [] xref: TAO:0000631 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000687 ! superficial pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000632 @@ -7490,8 +7491,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that has as its parts the organs concerned with reproduction." [UBERON:curator] xref: TAO:0000632 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0000633 @@ -7502,10 +7503,10 @@ synonym: "posterior tubercle" EXACT [] synonym: "posterior tuberculum" EXACT [] xref: TAO:0000633 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005909 ! presumptive preglomerular region relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000634 @@ -7515,9 +7516,9 @@ def: "Multi-tissue structure which forms most of the median tuberal portion of t synonym: "hypothalamus pars tuberalis " EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "tuberal hypothalamus" EXACT [ZFIN:ZDB-PUB-961014-1280] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000392 ! median tuberal portion -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000635 @@ -7527,9 +7528,9 @@ def: "Diencephalic nucleus that is part of the central pretectum and is dorsal t synonym: "nucleus praetectalis centralis" EXACT [] xref: TAO:0000635 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000636 @@ -7540,9 +7541,9 @@ comment: Not sure how much of the molecular layer is cerebellar crest. synonym: "crista cerebellaris molecular layer" EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000636 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000291 ! medial octavolateralis nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000637 @@ -7551,9 +7552,9 @@ namespace: zebrafish_anatomy def: "Postcranial axial cartilage and Weberian ossicle that is located dorsal to the scaphium. The claustrum is bilaterally paired." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000637 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000638 @@ -7563,8 +7564,8 @@ def: "Anterior commissure which is located immediately ventral to the supracommi synonym: "commissura anterior, pars dorsalis" EXACT [] xref: TAO:0000638 is_a: ZFA:0001108 ! anterior commissure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000639 @@ -7575,9 +7576,9 @@ synonym: "commissura nucleorum gustatoriorum secundariorum" EXACT [] synonym: "commissure of the secondary gustatory nuclei" RELATED [] xref: TAO:0000639 is_a: ZFA:0001708 ! cerebellar white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000640 @@ -7588,9 +7589,9 @@ synonym: "corneas" EXACT PLURAL [] xref: TAO:0000640 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001688 ! corneal primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0000641 @@ -7600,8 +7601,8 @@ def: "Twelve pairs of cranial nerves exit/enter the cranium through openings in synonym: "cranial nerves" EXACT PLURAL [] xref: TAO:0000641 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000642 @@ -7609,9 +7610,9 @@ name: decussation of the medial octavolateralis nucleus namespace: zebrafish_anatomy xref: TAO:0000642 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000381 ! lateral line sensory nucleus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000643 @@ -7622,9 +7623,9 @@ synonym: "anterior cerebellar tract" EXACT [] synonym: "tractus cerebellaris anterior" EXACT [] xref: TAO:0000643 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000644 @@ -7642,8 +7643,8 @@ namespace: zebrafish_anatomy synonym: "nucleus octavus descendens" EXACT [] xref: TAO:0000645 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000646 @@ -7653,9 +7654,9 @@ def: "Rod-like internal median skeletal support bones of the anal fin, which art synonym: "anal fin distal radials" EXACT PLURAL [] xref: TAO:0000646 is_a: ZFA:0001646 ! anal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001420 ! anal fin pterygiophore -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000647 @@ -7666,9 +7667,9 @@ synonym: "dorsal posterior thalamic nucleus" EXACT [] synonym: "nucleus dorsalis posterior thalami" EXACT [] xref: TAO:0000647 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000653 ! dorsal thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000648 @@ -7677,9 +7678,9 @@ namespace: zebrafish_anatomy def: "Musculature that is part of the dorsal fin. The dorsal fin musculature is composed of one unit per fin ray that are arranged in series on each side of the body. Each unit is composed of one fin ray, three supporting pterygophores, and a set of paired depressor, erector, and inclinator muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] xref: TAO:0000648 is_a: ZFA:0000207 ! fin musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000649 @@ -7689,9 +7690,9 @@ synonym: "cornu dorsale" EXACT [] synonym: "dorsal horn" EXACT [] xref: TAO:0000649 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000650 @@ -7700,9 +7701,9 @@ namespace: zebrafish_anatomy synonym: "dorsal motor roots of V" EXACT PLURAL [] xref: TAO:0000650 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000651 @@ -7713,9 +7714,9 @@ synonym: "arrector dorsalis pelvicus" EXACT [ZFIN:ZDB-PUB-171118-8] synonym: "dorsal pelvic arrectors" EXACT PLURAL [] xref: TAO:0000651 is_a: ZFA:0005275 ! arrector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000652 @@ -7725,9 +7726,9 @@ def: "The afferent sensory portion of the spinal nerve root." [http://en.wikiped synonym: "radix dorsalis" EXACT [] xref: TAO:0000652 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005578 ! spinal nerve root -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000653 @@ -7738,9 +7739,9 @@ synonym: "thalamus" RELATED [ZFIN:ZDB-PUB-100621-4] synonym: "thalamus, pars dorsalis" EXACT [] xref: TAO:0000653 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001215 ! thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000654 @@ -7749,8 +7750,8 @@ namespace: zebrafish_anatomy def: "Abducens motor nucleus which is located at the level of the superior reticular formation." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000654 is_a: ZFA:0000713 ! abducens motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000655 @@ -7759,9 +7760,9 @@ namespace: zebrafish_anatomy synonym: "tractus opticus dorsomedialis" EXACT [] xref: TAO:0000655 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000252 ! optic tract -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000656 @@ -7771,10 +7772,10 @@ def: "The ectopterygoid is dermal bone located at the anterior part of the palat synonym: "ectopterygoids" EXACT PLURAL [] xref: TAO:0000656 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000657 @@ -7785,11 +7786,11 @@ synonym: "endopterygoid" EXACT [] synonym: "mesopterygoid" EXACT [] xref: TAO:0000657 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005616 ! quadrate-entopterygoid joint relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000658 @@ -7800,9 +7801,9 @@ synonym: "epibranchial bones" EXACT PLURAL [] xref: TAO:0000658 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000660 @@ -7811,9 +7812,9 @@ namespace: zebrafish_anatomy def: "A free, modified neural spine of a preural or a ural vertebra that is placed between the last developed neural spine of a preural centrum and the dorsal axis (= anterior margin of first uroneural) of the caudal skeleton . An epural commonly supports one or more dorsal procurrent rays. An epural is an unpaired median perichondrally ossified bone." [TAO:curator] xref: TAO:0000660 is_a: ZFA:0001336 ! neural spine -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000661 @@ -7825,12 +7826,12 @@ xref: TAO:0000661 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001423 ! parachordal cartilage relationship: develops_from ZFA:0001504 ! occipital arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005423 ! basioccipital-exoccipital joint relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000662 @@ -7839,8 +7840,8 @@ namespace: zebrafish_anatomy synonym: "external pharyngoclavicularae" EXACT PLURAL [] xref: TAO:0000662 is_a: ZFA:0000172 ! branchial muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000663 @@ -7852,9 +7853,9 @@ synonym: "supratemporal" EXACT [] synonym: "tabular" EXACT [] xref: TAO:0000663 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000664 @@ -7866,9 +7867,9 @@ synonym: "facial nerve" EXACT [] synonym: "nervus facialis" EXACT [] xref: TAO:0000664 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000665 @@ -7876,10 +7877,10 @@ name: rostral root of abducens nerve namespace: zebrafish_anatomy xref: TAO:0000665 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000310 ! cranial nerve VI relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000666 @@ -7889,10 +7890,10 @@ def: "Artery of the gill filament." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "filamental arteries" EXACT PLURAL [] xref: TAO:0000666 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000667 ! gill filament relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000667 @@ -7902,9 +7903,9 @@ def: "Portion of tissue that projects outward from the gill and is a thread-like synonym: "gill filaments" EXACT PLURAL [] xref: TAO:0000667 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000668 @@ -7916,9 +7917,9 @@ synonym: "glossopharyngeal nerve" EXACT [] synonym: "nervus glossopharyngeus" EXACT [] xref: TAO:0000668 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0000669 @@ -7929,11 +7930,11 @@ synonym: "anterior kidney" EXACT [] synonym: "kidney marrow" EXACT [] xref: TAO:0000669 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney relationship: part_of ZFA:0001158 ! endocrine system relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000670 @@ -7943,9 +7944,9 @@ def: "Vein that carries blood away from the liver." [GOC:cvs, ORCiD:0000-0002-22 synonym: "hepatic veins" EXACT PLURAL [] xref: TAO:0000670 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000671 @@ -7955,8 +7956,8 @@ def: "A connective tissue partition developing at the apex of the chevron-shaped synonym: "horizontal septum" EXACT [] xref: TAO:0000671 is_a: ZFA:0001089 ! myoseptum -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000672 @@ -7967,11 +7968,11 @@ synonym: "hyomandibular" EXACT [] xref: TAO:0000672 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005469 ! hyomandibula-metapterygoid joint relationship: overlaps ZFA:0005632 ! preopercle vertical limb-hyomandibula joint relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000673 @@ -7982,8 +7983,8 @@ synonym: "HA" EXACT [] xref: TAO:0000673 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000674 @@ -7993,11 +7994,11 @@ def: "Dermal bone that is located anterior to the subopercle and lying below and synonym: "interopercles" EXACT PLURAL [] xref: TAO:0000674 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000555 ! opercular flap relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000676 @@ -8010,9 +8011,9 @@ synonym: "saccular otolith" EXACT [] synonym: "sacculith" EXACT [] xref: TAO:0000676 is_a: ZFA:0001617 ! otolith -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000428 ! saccule -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000677 @@ -8021,8 +8022,8 @@ namespace: zebrafish_anatomy synonym: "segmental intercostal arteries" EXACT PLURAL [] xref: TAO:0000677 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000678 @@ -8034,9 +8035,9 @@ synonym: "sensory hair cells anterior macula" EXACT PLURAL [] xref: TAO:0000678 is_a: ZFA:0009366 ! hair cell relationship: develops_from ZFA:0001098 ! immature hair cell anterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000168 ! anterior macula -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000679 @@ -8045,9 +8046,9 @@ namespace: zebrafish_anatomy synonym: "sensory roots of facial nerves" EXACT PLURAL [] xref: TAO:0000679 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000680 @@ -8058,10 +8059,10 @@ synonym: "sinoatrial valves" EXACT PLURAL [] xref: TAO:0000680 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000154 ! sinus venosus relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000681 @@ -8072,9 +8073,9 @@ synonym: "neural postzygapophyses" EXACT PLURAL [] synonym: "neural postzygopophysis" EXACT [] xref: TAO:0000681 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000682 @@ -8083,8 +8084,8 @@ namespace: zebrafish_anatomy synonym: "spinal arteries" EXACT PLURAL [] xref: TAO:0000682 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000683 @@ -8094,9 +8095,9 @@ def: "Diencephalic nucleus that is part of the synencephalon, is located adjacen synonym: "SCO" EXACT [] xref: TAO:0000683 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000684 @@ -8105,9 +8106,9 @@ namespace: zebrafish_anatomy def: "CNS white matter (commissure) that runs between the optic tectal hemispheres." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000684 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000685 @@ -8119,9 +8120,9 @@ synonym: "superficial abductors" EXACT PLURAL [] xref: TAO:0000685 is_a: ZFA:0005269 ! abductor muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000686 @@ -8131,9 +8132,9 @@ synonym: "superficial gray and white zone" EXACT [] synonym: "superficial grey and white zones" EXACT PLURAL [] xref: TAO:0000686 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000687 @@ -8143,9 +8144,9 @@ def: "Multi-tissue structure that is the superficial part of the pretectum and i xref: TAO:0000687 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005908 ! presumptive pretectum proliferative zone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000418 ! pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000688 @@ -8157,9 +8158,9 @@ subset: cell_slim synonym: "support cells" RELATED PLURAL [] xref: TAO:0000688 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0000689 @@ -8170,8 +8171,8 @@ synonym: "area ventralis telencephali, nucleus supracommissuralis" EXACT [] synonym: "supracommissural nucleus of V" EXACT [] xref: TAO:0000689 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000690 @@ -8179,8 +8180,8 @@ name: supraoptic commissure namespace: zebrafish_anatomy xref: TAO:0000690 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000691 @@ -8190,10 +8191,10 @@ def: "Paired dermal bones that form the anterodorsal margin of the orbit." [GOC: synonym: "supraorbital bones" EXACT PLURAL [] xref: TAO:0000691 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001410 ! orbital region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000692 @@ -8204,10 +8205,10 @@ synonym: "symplectics" EXACT PLURAL [] xref: TAO:0000692 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001422 ! hyosymplectic cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005631 ! preopercle horizontal limb-symplectic joint relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000693 @@ -8216,8 +8217,8 @@ namespace: zebrafish_anatomy def: "The tangential nucleus is located in rhombomere 5 and receives a dense utricular input. Tangential nucleus neurons project contralaterally to extraocular motoneurons and to multiple sites within the reticulospinal complex; unlike other classes of vestibular neuron, they modulate their firing in response to static head displacements." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120702-13, ZFIN:ZDB-PUB-160324-18] xref: TAO:0000693 is_a: ZFA:0000401 ! octaval nerve sensory nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000694 @@ -8230,10 +8231,10 @@ synonym: "tooth" EXACT [] xref: TAO:0000694 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005138 ! dental organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001239 ! ceratobranchial 5 bone -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000695 @@ -8243,9 +8244,9 @@ def: "The anatomical space located between the lips and the oral valves." [GOC:m synonym: "labial cavities" EXACT PLURAL [] xref: TAO:0000695 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000696 @@ -8257,9 +8258,9 @@ synonym: "ventriculi telencephali " EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0000696 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001259 ! forebrain ventricle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000697 @@ -8271,8 +8272,8 @@ synonym: "CN-V" EXACT [] synonym: "trigeminal nerve" EXACT [] xref: TAO:0000697 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000698 @@ -8282,10 +8283,10 @@ def: "The fourth Weberian ossicle. The tripus is a complex modification of the p xref: TAO:0000698 is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001169 ! vertebra 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000699 @@ -8302,10 +8303,10 @@ def: "Otolith organ comprised of the macula utricle and lapillus. The lagena is synonym: "utriculus" EXACT [] xref: TAO:0000700 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000559 ! otolith organ relationship: part_of ZFA:0005409 ! pars superior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000701 @@ -8318,9 +8319,9 @@ synonym: "ventral arrectors" EXACT PLURAL [] xref: TAO:0000701 is_a: ZFA:0005275 ! arrector muscle relationship: develops_from ZFA:0005651 ! primitive pectoral fin abductor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0000702 @@ -8329,9 +8330,9 @@ namespace: zebrafish_anatomy synonym: "ventral horns spinal cord" EXACT PLURAL [] xref: TAO:0000702 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000703 @@ -8340,8 +8341,8 @@ namespace: zebrafish_anatomy def: "Trigeminal motor nucleus that is located at the ventrolateral edge of the lateral longitudinal fascicle." [ISBN:3764351209] xref: TAO:0000703 is_a: ZFA:0001365 ! trigeminal motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000704 @@ -8351,9 +8352,9 @@ def: "Deep, narrow muscle that arises anteriorly and laterally of the pelvic abd synonym: "ventral pelvic arrectors" EXACT PLURAL [] xref: TAO:0000704 is_a: ZFA:0005275 ! arrector muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000258 ! pelvic fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000705 @@ -8363,9 +8364,9 @@ def: "The efferent motor portion of the spinal nerve root." [http://en.wikipedia synonym: "ventral roots" EXACT PLURAL [] xref: TAO:0000705 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005578 ! spinal nerve root -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000706 @@ -8375,9 +8376,9 @@ def: "The posterior intestine has short longitudinally arranged epithelial folds xref: TAO:0000706 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000707 @@ -8386,9 +8387,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure which is the ventral region of the median tuberal portion of the hypothalamus and is the most rostral region of the hypothalamus. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0000707 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000392 ! median tuberal portion -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000708 @@ -8397,9 +8398,9 @@ namespace: zebrafish_anatomy synonym: "ventrolateral optic tracts" EXACT PLURAL [] xref: TAO:0000708 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000252 ! optic tract -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000709 @@ -8408,8 +8409,8 @@ namespace: zebrafish_anatomy synonym: "vestibulo-spinal tracts" EXACT PLURAL [] xref: TAO:0000709 is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000710 @@ -8419,9 +8420,9 @@ synonym: "commissural nucleus of Cajal" EXACT [] synonym: "nucleus commissuralis Cajal" EXACT [] xref: TAO:0000710 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000711 @@ -8433,9 +8434,9 @@ synonym: "DEL cells" EXACT PLURAL [] xref: TAO:0000711 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001473 ! deep blastomere -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0000712 @@ -8445,9 +8446,9 @@ def: "The portion of the YSL that lies deep to the blastoderm during epiboly." [ synonym: "I-YSL" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000712 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000013 ! Blastula:Oblong +relationship: start ZFS:0000013 ! blastula:oblong [Term] id: ZFA:0000713 @@ -8460,9 +8461,9 @@ synonym: "motor nucleus VI" EXACT [] synonym: "nVI" EXACT [] xref: TAO:0000713 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000714 @@ -8473,9 +8474,9 @@ synonym: "APN" EXACT [] synonym: "nucleus praetectalis accessorius" EXACT [] xref: TAO:0000714 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000183 ! central pretectum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000715 @@ -8486,9 +8487,9 @@ synonym: "adductors hyohyoid" EXACT PLURAL [] synonym: "hyohyoidei adductores" EXACT [] xref: TAO:0000715 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007052 ! hyohyoideus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000716 @@ -8498,10 +8499,10 @@ def: "Artery that is part of the pharyngeal arches 3-5, and forms the afferent p synonym: "ABA" EXACT [] xref: TAO:0000716 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000717 @@ -8510,9 +8511,9 @@ namespace: zebrafish_anatomy def: "Apical ectodermal ridge that is part of the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000717 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000718 @@ -8521,9 +8522,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 27 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000718 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000719 @@ -8534,9 +8535,9 @@ subset: cell_slim synonym: "slow muscle cells somite 21" EXACT PLURAL [] xref: TAO:0000719 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000720 @@ -8547,9 +8548,9 @@ subset: cell_slim synonym: "slow muscle cells somite 24" EXACT PLURAL [] xref: TAO:0000720 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000721 @@ -8560,9 +8561,9 @@ subset: cell_slim synonym: "slow muscle cells somite 27" EXACT PLURAL [] xref: TAO:0000721 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000722 @@ -8573,9 +8574,9 @@ subset: cell_slim synonym: "slow muscle cells somite 3" EXACT PLURAL [] xref: TAO:0000722 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000723 @@ -8586,9 +8587,9 @@ subset: cell_slim synonym: "slow muscle cells somite 5" EXACT PLURAL [] xref: TAO:0000723 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000724 @@ -8599,9 +8600,9 @@ subset: cell_slim synonym: "slow muscle cells somite 8" EXACT PLURAL [] xref: TAO:0000724 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000725 @@ -8610,8 +8611,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 11 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000725 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000726 @@ -8620,8 +8621,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 14 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000726 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000727 @@ -8630,8 +8631,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 17 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000727 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000728 @@ -8640,8 +8641,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 2 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000728 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000729 @@ -8650,9 +8651,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 3 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000729 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000730 @@ -8661,8 +8662,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 23 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000730 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000731 @@ -8671,8 +8672,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 27 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000731 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000732 @@ -8681,8 +8682,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 3 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000732 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000733 @@ -8691,8 +8692,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 7 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000733 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000734 @@ -8703,9 +8704,9 @@ synonym: "caudal fin vertebra" EXACT [] synonym: "specialized centra/vertebrae" EXACT PLURAL [] xref: TAO:0000734 is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0000735 @@ -8717,9 +8718,9 @@ synonym: "hemal postzygapophyses" EXACT PLURAL [] synonym: "hemal postzygopophysis" EXACT [] xref: TAO:0000735 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000519 ! hemal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000737 @@ -8729,9 +8730,9 @@ def: "Skeletal system that is part of the head, including the splanchnocranium, synonym: "cranial skeleton" EXACT [] xref: TAO:0000737 is_a: ZFA:0000434 ! skeletal system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000738 @@ -8743,9 +8744,9 @@ synonym: "dorsal oblique extraocular muscles" EXACT PLURAL [] synonym: "superior oblique muscle" EXACT [ZFIN:ZDB-PUB-110512-18] xref: TAO:0000738 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000739 @@ -8754,9 +8755,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 11 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000739 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000740 @@ -8765,9 +8766,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 5 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000740 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000741 @@ -8776,9 +8777,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 14 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000741 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000742 @@ -8787,9 +8788,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 17 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000742 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000743 @@ -8798,9 +8799,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 2 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000743 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000744 @@ -8809,9 +8810,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 22 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000744 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000745 @@ -8820,9 +8821,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 25 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000745 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000746 @@ -8831,9 +8832,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 28 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000746 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000747 @@ -8842,9 +8843,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 30 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000747 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000748 @@ -8853,9 +8854,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 6 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000748 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000749 @@ -8864,9 +8865,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 9 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000749 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000750 @@ -8878,9 +8879,9 @@ synonym: "fast muscle cells somite 10" EXACT PLURAL [] synonym: "fast muscle fiber somite 10" EXACT [] xref: TAO:0000750 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000751 @@ -8889,9 +8890,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 8 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000751 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000752 @@ -8903,9 +8904,9 @@ synonym: "fast muscle cells somite 13" EXACT PLURAL [] synonym: "fast muscle fiber somite 13" EXACT [] xref: TAO:0000752 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000753 @@ -8917,9 +8918,9 @@ synonym: "fast muscle cells somite 16" EXACT PLURAL [] synonym: "fast muscle fiber somite 16" EXACT [] xref: TAO:0000753 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000754 @@ -8931,9 +8932,9 @@ synonym: "fast muscle cells somite 19" EXACT PLURAL [] synonym: "fast muscle fiber somite 19" EXACT [] xref: TAO:0000754 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000755 @@ -8945,9 +8946,9 @@ synonym: "fast muscle cells somite 21" EXACT PLURAL [] synonym: "fast muscle fiber somite 21" EXACT [] xref: TAO:0000755 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000756 @@ -8959,9 +8960,9 @@ synonym: "fast muscle cells somite 24" EXACT PLURAL [] synonym: "fast muscle fiber somite 24" EXACT [] xref: TAO:0000756 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000757 @@ -8973,9 +8974,9 @@ synonym: "fast muscle cells somite 27" EXACT PLURAL [] synonym: "fast muscle fiber somite 27" EXACT [] xref: TAO:0000757 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000758 @@ -8987,9 +8988,9 @@ synonym: "fast muscle cells somite 3" EXACT PLURAL [] synonym: "fast muscle fiber somite 3" EXACT [] xref: TAO:0000758 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000759 @@ -9001,9 +9002,9 @@ synonym: "fast muscle cells somite 5" EXACT PLURAL [] synonym: "fast muscle fiber somite 5" EXACT [] xref: TAO:0000759 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000760 @@ -9015,9 +9016,9 @@ synonym: "fast muscle cells somite 8" EXACT PLURAL [] synonym: "fast muscle fiber somite 8" EXACT [] xref: TAO:0000760 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000761 @@ -9028,9 +9029,9 @@ synonym: "floor plate midbrain" RELATED [] synonym: "floorplate midbrain" RELATED [] xref: TAO:0000761 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000762 @@ -9040,8 +9041,8 @@ def: "Cranial neural crest that gives rise to the facio-acoustic ganglion." [GOC synonym: "facio acoustic neural crest" EXACT [] xref: TAO:0000762 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000763 @@ -9052,10 +9053,10 @@ synonym: "floor plate r2" EXACT [] synonym: "floorplate r2" EXACT [] xref: TAO:0000763 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000764 @@ -9066,10 +9067,10 @@ synonym: "floor plate r5" EXACT [] synonym: "floorplate r5" EXACT [] xref: TAO:0000764 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000765 @@ -9080,10 +9081,10 @@ synonym: "floor plate r8" EXACT [] synonym: "floorplate r8" EXACT [] xref: TAO:0000765 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000766 @@ -9092,9 +9093,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is part of the valvula cerebelli and consists largely of axons and dendrites." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000766 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000767 @@ -9103,9 +9104,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 11 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000767 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000768 @@ -9114,9 +9115,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 14 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000768 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000769 @@ -9125,9 +9126,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 17 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000769 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000770 @@ -9136,9 +9137,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 2 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000770 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000771 @@ -9147,9 +9148,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 22 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000771 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000772 @@ -9158,9 +9159,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 25 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000772 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000773 @@ -9172,9 +9173,9 @@ synonym: "fast muscle cells somite 12" EXACT PLURAL [] synonym: "fast muscle fiber somite 12" EXACT [] xref: TAO:0000773 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000774 @@ -9184,9 +9185,9 @@ def: "The hypaxial region of somite 28 derived body wall muscle. The hypaxial re subset: cell_slim xref: TAO:0000774 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000775 @@ -9196,9 +9197,9 @@ def: "The hypaxial region of somite 30 derived body wall muscle. The hypaxial re subset: cell_slim xref: TAO:0000775 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000776 @@ -9207,9 +9208,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 6 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000776 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000777 @@ -9218,9 +9219,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 9 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000777 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000778 @@ -9232,9 +9233,9 @@ synonym: "interneurons spinal cord" EXACT PLURAL [] xref: CL:0005000 xref: TAO:0000778 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000779 @@ -9244,9 +9245,9 @@ def: "Portion of the lateral forebrain bundle that lies in the telencephalon." [ synonym: "lateral forebrain bundles telencephalon" EXACT PLURAL [] xref: TAO:0000779 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007012 ! lateral forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000780 @@ -9256,9 +9257,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the diencephalic synonym: "lateral wall diencephalon" EXACT [] xref: TAO:0000780 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000781 @@ -9267,9 +9268,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 1." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000781 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000782 @@ -9278,9 +9279,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000782 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000783 @@ -9289,9 +9290,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000783 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000949 ! rhombomere 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000784 @@ -9303,9 +9304,9 @@ synonym: "fast muscle cells somite 15" EXACT PLURAL [] synonym: "fast muscle fiber somite 15" EXACT [] xref: TAO:0000784 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000785 @@ -9315,9 +9316,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the telencephalic synonym: "lateral wall telencephalon" EXACT [] xref: TAO:0000785 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000786 @@ -9325,9 +9326,9 @@ name: medial migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000786 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000787 @@ -9335,8 +9336,8 @@ name: mesenchyme derived from head neural crest namespace: zebrafish_anatomy xref: TAO:0000787 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000788 @@ -9345,9 +9346,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme part of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0000788 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000789 @@ -9357,9 +9358,9 @@ def: "Mesoderm that is part of the pectoral fin bud." [GOC:mh, ORCiD:0000-0001-9 synonym: "mesoderm pectoral fin buds" EXACT PLURAL [] xref: TAO:0000789 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000790 @@ -9370,9 +9371,9 @@ subset: cell_slim synonym: "muscle pioneers somite 10" EXACT PLURAL [] xref: TAO:0000790 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000791 @@ -9383,9 +9384,9 @@ subset: cell_slim synonym: "muscle pioneers somite 13" EXACT PLURAL [] xref: TAO:0000791 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000792 @@ -9396,9 +9397,9 @@ subset: cell_slim synonym: "muscle pioneers somite 16" EXACT PLURAL [] xref: TAO:0000792 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000793 @@ -9409,9 +9410,9 @@ subset: cell_slim synonym: "muscle pioneers somite 19" EXACT PLURAL [] xref: TAO:0000793 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000794 @@ -9422,9 +9423,9 @@ subset: cell_slim synonym: "muscle pioneers somite 22" EXACT PLURAL [] xref: TAO:0000794 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000795 @@ -9436,9 +9437,9 @@ synonym: "fast muscle cells somite 18" EXACT PLURAL [] synonym: "fast muscle fiber somite 18" EXACT [] xref: TAO:0000795 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000796 @@ -9449,9 +9450,9 @@ subset: cell_slim synonym: "muscle pioneers somite 25" EXACT PLURAL [] xref: TAO:0000796 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000797 @@ -9462,9 +9463,9 @@ subset: cell_slim synonym: "muscle pioneers somite 28" EXACT PLURAL [] xref: TAO:0000797 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000798 @@ -9475,9 +9476,9 @@ subset: cell_slim synonym: "muscle pioneers somite 30" EXACT PLURAL [] xref: TAO:0000798 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000799 @@ -9488,9 +9489,9 @@ subset: cell_slim synonym: "muscle pioneers somite 6" EXACT PLURAL [] xref: TAO:0000799 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000800 @@ -9501,9 +9502,9 @@ subset: cell_slim synonym: "muscle pioneers somite 9" EXACT PLURAL [] xref: TAO:0000800 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000801 @@ -9513,9 +9514,9 @@ def: "Portion of somite 11 that gives rise to body wall muscle masses." [ZFIN:ZD subset: cell_slim xref: TAO:0000801 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000802 @@ -9525,9 +9526,9 @@ def: "Portion of somite 15 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000802 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000803 @@ -9537,9 +9538,9 @@ def: "Portion of somite 18 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000803 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000804 @@ -9549,9 +9550,9 @@ def: "Portion of somite 20 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000804 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000805 @@ -9561,9 +9562,9 @@ def: "Portion of somite 23 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000805 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000806 @@ -9575,21 +9576,21 @@ synonym: "fast muscle cells somite 20" EXACT PLURAL [] synonym: "fast muscle fiber somite 20" EXACT [] xref: TAO:0000806 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000807 name: myotome somite 26 namespace: zebrafish_anatomy -def: "Portion of somite 16 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] +def: "Portion of somite 26 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] subset: cell_slim xref: TAO:0000807 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000808 @@ -9599,9 +9600,9 @@ def: "Portion of somite 29 that gives rise to body wall muscle masses." [GOC:ymb subset: cell_slim xref: TAO:0000808 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000809 @@ -9611,9 +9612,9 @@ def: "Portion of somite 4 that gives rise to body wall muscle masses." [GOC:ymb, subset: cell_slim xref: TAO:0000809 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000810 @@ -9623,9 +9624,9 @@ def: "Portion of somite 7 that gives rise to body wall muscle masses." [GOC:ymb, subset: cell_slim xref: TAO:0000810 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000811 @@ -9635,8 +9636,8 @@ def: "Cranial neural crest that is part of the diencephalon." [GOC:ymb, ORCiD:00 synonym: "diencephalic neural crest" EXACT [] xref: TAO:0000811 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000812 @@ -9645,8 +9646,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that is part of the telencephalon." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0000812 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000813 @@ -9657,9 +9658,9 @@ synonym: "neuromast infraorbital" EXACT [] synonym: "neuromasts infraorbital" EXACT PLURAL [] xref: TAO:0000813 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000524 ! infraorbital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000814 @@ -9670,9 +9671,9 @@ synonym: "neuromast opercular" EXACT [] synonym: "neuromasts opercular" EXACT PLURAL [] xref: TAO:0000814 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000424 ! opercular lateral line -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0000815 @@ -9680,9 +9681,9 @@ name: nucleus of the medial longitudinal fasciculus medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000815 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000816 @@ -9691,9 +9692,9 @@ namespace: zebrafish_anatomy def: "The epithelium that lines the oral cavity. The oral epithelium epithelial cells with many short microvilli as well as mucous cells, rodlet cells and taste buds." [ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24] xref: TAO:0000816 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0000817 @@ -9705,9 +9706,9 @@ synonym: "fast muscle cells somite 23" EXACT PLURAL [] synonym: "fast muscle fiber somite 23" EXACT [] xref: TAO:0000817 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000818 @@ -9717,8 +9718,8 @@ def: "Vagal neural crest is adjacent to the first seven somites gives rise to bo synonym: "post-otic neural crest" EXACT [] xref: TAO:0000818 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000819 @@ -9729,8 +9730,8 @@ synonym: "area ventralis telencephali, nucleus postcommissuralis" EXACT [] synonym: "postcommissural nucleus of V" EXACT [] xref: TAO:0000819 is_a: ZFA:0001666 ! periventricular nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000820 @@ -9749,8 +9750,8 @@ subset: cell_slim synonym: "primary neurons hindbrain" EXACT PLURAL [] xref: TAO:0000821 is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000822 @@ -9761,8 +9762,8 @@ synonym: "r2" EXACT [] xref: TAO:0000822 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001208 ! presumptive rhombomere 2 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000823 @@ -9773,8 +9774,8 @@ synonym: "r5" EXACT [] xref: TAO:0000823 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001211 ! presumptive rhombomere 5 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000824 @@ -9783,10 +9784,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 2." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000824 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000822 ! rhombomere 2 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000825 @@ -9795,10 +9796,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000825 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000826 @@ -9809,9 +9810,9 @@ synonym: "central nucleus of semicircular torus" EXACT [] synonym: "nucleus centralis tori semicircularis" EXACT [] xref: TAO:0000826 is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000599 ! torus semicircularis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000827 @@ -9823,9 +9824,9 @@ synonym: "fast muscle cells somite 26" EXACT PLURAL [] synonym: "fast muscle fiber somite 26" EXACT [] xref: TAO:0000827 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000828 @@ -9834,10 +9835,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000828 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000823 ! rhombomere 5 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000829 @@ -9846,9 +9847,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 11 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000829 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000830 @@ -9857,9 +9858,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 14 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000830 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000831 @@ -9868,9 +9869,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 17 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000831 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000832 @@ -9879,9 +9880,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 2 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000832 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000833 @@ -9890,9 +9891,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 22 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000833 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000834 @@ -9901,9 +9902,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 25 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000834 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000835 @@ -9912,9 +9913,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 28 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000835 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000836 @@ -9923,9 +9924,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 30 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000836 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000837 @@ -9934,9 +9935,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 6 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000837 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000838 @@ -9948,9 +9949,9 @@ synonym: "fast muscle cells somite 29" EXACT PLURAL [] synonym: "fast muscle fiber somite 29" EXACT [] xref: TAO:0000838 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000839 @@ -9959,9 +9960,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 9 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000839 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000840 @@ -9972,9 +9973,9 @@ subset: cell_slim synonym: "slow muscle cells somite 11" EXACT PLURAL [] xref: TAO:0000840 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000841 @@ -9985,9 +9986,9 @@ subset: cell_slim synonym: "slow muscle cells somite 14" EXACT PLURAL [] xref: TAO:0000841 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000842 @@ -9998,9 +9999,9 @@ subset: cell_slim synonym: "slow muscle cells somite 17" EXACT PLURAL [] xref: TAO:0000842 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000843 @@ -10011,9 +10012,9 @@ subset: cell_slim synonym: "slow muscle cells somite 2" EXACT PLURAL [] xref: TAO:0000843 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000844 @@ -10024,9 +10025,9 @@ subset: cell_slim synonym: "slow muscle cells somite 22" EXACT PLURAL [] xref: TAO:0000844 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000845 @@ -10037,9 +10038,9 @@ subset: cell_slim synonym: "slow muscle cells somite 25" EXACT PLURAL [] xref: TAO:0000845 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000846 @@ -10050,9 +10051,9 @@ subset: cell_slim synonym: "slow muscle cells somite 28" EXACT PLURAL [] xref: TAO:0000846 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000847 @@ -10063,9 +10064,9 @@ subset: cell_slim synonym: "slow muscle cells somite 30" EXACT PLURAL [] xref: TAO:0000847 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000848 @@ -10076,9 +10077,9 @@ subset: cell_slim synonym: "slow muscle cells somite 6" EXACT PLURAL [] xref: TAO:0000848 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000849 @@ -10090,9 +10091,9 @@ synonym: "fast muscle cells somite 4" EXACT PLURAL [] synonym: "fast muscle fiber somite 4" EXACT [] xref: TAO:0000849 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000850 @@ -10103,9 +10104,9 @@ subset: cell_slim synonym: "slow muscle cells somite 9" EXACT PLURAL [] xref: TAO:0000850 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000851 @@ -10114,8 +10115,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 12 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000851 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000852 @@ -10124,8 +10125,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 15 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000852 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000853 @@ -10134,8 +10135,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 18 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000853 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000854 @@ -10144,8 +10145,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail 21 segment or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000854 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000855 @@ -10154,8 +10155,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 24 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000855 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000856 @@ -10164,8 +10165,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 28 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000856 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000857 @@ -10174,8 +10175,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 4 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000857 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000858 @@ -10184,8 +10185,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 8 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000858 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000859 @@ -10198,9 +10199,9 @@ synonym: "specialized haemal arch and spine" EXACT [] synonym: "specialized hemal arches and spines" EXACT PLURAL [] xref: TAO:0000859 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000860 @@ -10212,9 +10213,9 @@ synonym: "fast muscle cells somite 7" EXACT PLURAL [] synonym: "fast muscle fiber somite 7" EXACT [] xref: TAO:0000860 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000861 @@ -10226,9 +10227,9 @@ synonym: "inferior oblique muscle" EXACT [ZFIN:ZDB-PUB-110512-18] synonym: "ventral oblique extraocular muscles" EXACT PLURAL [] xref: TAO:0000861 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000511 ! extraocular musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000862 @@ -10237,9 +10238,9 @@ namespace: zebrafish_anatomy def: "Median fin skeleton supporting the caudal fin." [TAO:curator] xref: TAO:0000862 is_a: ZFA:0001123 ! axial fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000863 @@ -10249,9 +10250,9 @@ def: "Anatomical cluster that is part of the cranium and composed of dermally de synonym: "dermal bone cranium" EXACT [] xref: TAO:0000863 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000864 @@ -10260,9 +10261,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 1 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000864 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000865 @@ -10271,9 +10272,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 12 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000865 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000866 @@ -10282,9 +10283,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 15 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000866 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000867 @@ -10293,9 +10294,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 18 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000867 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000868 @@ -10304,9 +10305,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 20 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000868 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000869 @@ -10315,9 +10316,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 23 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000869 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000870 @@ -10326,9 +10327,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 26 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000870 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000871 @@ -10338,10 +10339,10 @@ def: "Floor plate that is part of the diencephalon." [GOC:mh, ORCiD:0000-0001-91 synonym: "floorplate diencephalon" EXACT [] xref: TAO:0000871 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000872 @@ -10350,9 +10351,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 29 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000872 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000873 @@ -10361,9 +10362,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 4 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000873 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000874 @@ -10372,9 +10373,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 7 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000874 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000875 @@ -10395,9 +10396,9 @@ synonym: "fast muscle cells somite 11" EXACT PLURAL [] synonym: "fast muscle fiber somite 11" EXACT [] xref: TAO:0000876 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000801 ! myotome somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000877 @@ -10409,9 +10410,9 @@ synonym: "fast muscle cells somite 14" EXACT PLURAL [] synonym: "fast muscle fiber somite 14" EXACT [] xref: TAO:0000877 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000044 ! myotome somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000878 @@ -10423,9 +10424,9 @@ synonym: "fast muscle cells somite 17" EXACT PLURAL [] synonym: "fast muscle fiber somite 17" EXACT [] xref: TAO:0000878 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001015 ! myotome somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000879 @@ -10437,9 +10438,9 @@ synonym: "fast muscle cells somite 2" EXACT PLURAL [] synonym: "fast muscle fiber somite 2" EXACT [] xref: TAO:0000879 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001016 ! myotome somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000880 @@ -10451,9 +10452,9 @@ synonym: "fast muscle cells somite 22" EXACT PLURAL [] synonym: "fast muscle fiber somite 22" EXACT [] xref: TAO:0000880 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001017 ! myotome somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000881 @@ -10465,9 +10466,9 @@ synonym: "fast muscle cells somite 25" EXACT PLURAL [] synonym: "fast muscle fiber somite 25" EXACT [] xref: TAO:0000881 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001018 ! myotome somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000882 @@ -10477,10 +10478,10 @@ def: "Floor plate that is part of the rhombomere 1." [GOC:mh, ORCiD:0000-0001-91 synonym: "floor plate r1" EXACT [] xref: TAO:0000882 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000883 @@ -10492,9 +10493,9 @@ synonym: "fast muscle cells somite 28" EXACT PLURAL [] synonym: "fast muscle fiber somite 28" EXACT [] xref: TAO:0000883 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001019 ! myotome somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000884 @@ -10506,9 +10507,9 @@ synonym: "fast muscle cells somite 30" EXACT PLURAL [] synonym: "fast muscle fiber somite 30" EXACT [] xref: TAO:0000884 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001020 ! myotome somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000885 @@ -10520,9 +10521,9 @@ synonym: "fast muscle cells somite 6" EXACT PLURAL [] synonym: "fast muscle fiber somite 6" EXACT [] xref: TAO:0000885 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001021 ! myotome somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000886 @@ -10534,9 +10535,9 @@ synonym: "fast muscle cells somite 9" EXACT PLURAL [] synonym: "fast muscle fiber somite 9" EXACT [] xref: TAO:0000886 is_a: ZFA:0009117 ! fast muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001022 ! myotome somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000887 @@ -10546,10 +10547,10 @@ def: "Floor plate that is part of the neural rod." [GOC:mh, GOC:ymb, ORCiD:0000- synonym: "floorplate neural rod" EXACT [] xref: TAO:0000887 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000888 @@ -10560,10 +10561,10 @@ synonym: "floor plate r3" EXACT [] synonym: "floorplate r3" EXACT [] xref: TAO:0000888 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000889 @@ -10574,10 +10575,10 @@ synonym: "floor plate r6" EXACT [] synonym: "floorplate r6" EXACT [] xref: TAO:0000889 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000890 @@ -10588,10 +10589,10 @@ synonym: "floorplate spinal cord" EXACT [] xref: TAO:0000890 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001434 ! floor plate neural tube -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000891 @@ -10600,9 +10601,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 1 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000891 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000892 @@ -10611,9 +10612,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 12 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000892 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000893 @@ -10624,10 +10625,10 @@ synonym: "floor plate r4" EXACT [] synonym: "floorplate r4" EXACT [] xref: TAO:0000893 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000894 @@ -10636,9 +10637,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 15 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000894 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000895 @@ -10647,9 +10648,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 18 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000895 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000896 @@ -10658,9 +10659,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 20 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000896 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000897 @@ -10669,9 +10670,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 23 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000897 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000898 @@ -10680,9 +10681,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 26 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000898 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000899 @@ -10691,9 +10692,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 29 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000899 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000900 @@ -10702,9 +10703,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 4 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000900 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000901 @@ -10713,9 +10714,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 7 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000901 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000902 @@ -10725,9 +10726,9 @@ def: "Musculature associated with the hypurals." [GOC:cvs, ORCiD:0000-0002-2244- synonym: "hypural muscles" EXACT PLURAL [] xref: TAO:0000902 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000628 ! caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000903 @@ -10736,9 +10737,9 @@ namespace: zebrafish_anatomy comment: ZDB-PUB-010601-11 says there are 4 sub-nuclei. xref: TAO:0000903 is_a: ZFA:0005577 ! tegmental nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000904 @@ -10749,10 +10750,10 @@ synonym: "floor plate r7" EXACT [] synonym: "floorplate r7" EXACT [] xref: TAO:0000904 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001258 ! floor plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000905 @@ -10760,8 +10761,8 @@ name: lateral mesenchyme derived from mesoderm namespace: zebrafish_anatomy xref: TAO:0000905 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000906 @@ -10771,9 +10772,9 @@ def: "Multi-tissue structure forming the sides of the lumen of the midbrain regi synonym: "lateral wall midbrain" EXACT [] xref: TAO:0000906 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000907 @@ -10782,9 +10783,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 2." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000907 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000908 @@ -10793,9 +10794,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000908 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000909 @@ -10804,9 +10805,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000909 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000153 ! rhombomere 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000910 @@ -10815,9 +10816,9 @@ namespace: zebrafish_anatomy synonym: "medial forebrain bundles telencephalon" EXACT PLURAL [] xref: TAO:0000910 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005111 ! medial forebrain bundle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000911 @@ -10833,9 +10834,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme part of median fin fold." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000912 is_a: ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0000913 @@ -10844,9 +10845,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue which is part of the valvula cerebelli and contains neuronal cell bodies." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000913 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000914 @@ -10856,10 +10857,10 @@ def: "Floor plate that is part of the telencephalon." [GOC:mh, ORCiD:0000-0001-9 synonym: "floorplate telencephalon" EXACT [] xref: TAO:0000914 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000915 @@ -10870,9 +10871,9 @@ subset: cell_slim synonym: "muscle pioneers somite 11" EXACT PLURAL [] xref: TAO:0000915 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000725 ! somite 11 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000916 @@ -10883,9 +10884,9 @@ subset: cell_slim synonym: "muscle pioneers somite 14" EXACT PLURAL [] xref: TAO:0000916 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000726 ! somite 14 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000917 @@ -10896,9 +10897,9 @@ subset: cell_slim synonym: "muscle pioneers somite 17" EXACT PLURAL [] xref: TAO:0000917 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000918 @@ -10909,9 +10910,9 @@ subset: cell_slim synonym: "muscle pioneers somite 20" EXACT PLURAL [] xref: TAO:0000918 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000919 @@ -10922,9 +10923,9 @@ subset: cell_slim synonym: "muscle pioneers somite 23" EXACT PLURAL [] xref: TAO:0000919 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000920 @@ -10935,9 +10936,9 @@ subset: cell_slim synonym: "muscle pioneers somite 26" EXACT PLURAL [] xref: TAO:0000920 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000921 @@ -10948,9 +10949,9 @@ subset: cell_slim synonym: "muscle pioneers somite 29" EXACT PLURAL [] xref: TAO:0000921 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000922 @@ -10961,9 +10962,9 @@ subset: cell_slim synonym: "muscle pioneers somite 4" EXACT PLURAL [] xref: TAO:0000922 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000923 @@ -10974,9 +10975,9 @@ subset: cell_slim synonym: "muscle pioneers somite 7" EXACT PLURAL [] xref: TAO:0000923 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000924 @@ -10985,9 +10986,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 1 that gives rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0000924 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000072 ! somite 1 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000925 @@ -10996,9 +10997,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 10 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000925 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000926 @@ -11007,9 +11008,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 12 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000926 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000927 @@ -11018,9 +11019,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 16 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000927 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000928 @@ -11029,9 +11030,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 19 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000928 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000929 @@ -11040,9 +11041,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 21 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000929 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000930 @@ -11051,9 +11052,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 24 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000930 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000931 @@ -11062,9 +11063,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 27 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000931 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000932 @@ -11073,9 +11074,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 3 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000932 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000933 @@ -11084,9 +11085,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 5 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000933 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000934 @@ -11095,9 +11096,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 8 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000934 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000935 @@ -11107,8 +11108,8 @@ def: "Neural crest that is part of the midbrain." [GOC:ymb, ORCiD:0000-0002-9900 synonym: "mesencephalic neural crest" EXACT [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0000935 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000936 @@ -11118,9 +11119,9 @@ def: "Rod-like internal median skeletal support bones of the dorsal fin, which a synonym: "dorsal fin distal radials" EXACT PLURAL [] xref: TAO:0000936 is_a: ZFA:0001647 ! dorsal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000937 @@ -11129,9 +11130,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 13 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000937 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000938 @@ -11142,10 +11143,10 @@ synonym: "canalis centralis" EXACT [] synonym: "neural lumen" EXACT [] xref: TAO:0000938 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000939 @@ -11156,9 +11157,9 @@ synonym: "neuromast middle" EXACT [] synonym: "neuromasts middle" EXACT PLURAL [] xref: TAO:0000939 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000344 ! middle lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0000940 @@ -11170,9 +11171,9 @@ synonym: "neuromasts posterior" EXACT PLURAL [] xref: TAO:0000940 is_a: ZFA:0000243 ! neuromast relationship: develops_from ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000944 ! posterior lateral line -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000941 @@ -11182,9 +11183,9 @@ def: "Diencephalic nucleus that is part of the synencephalon, is located adjacen xref: TAO:0000941 is_a: ZFA:0001659 ! diencephalic nucleus relationship: develops_from ZFA:0005871 ! region of the nucleus of the medial longitudinal fascicle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000293 ! synencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000943 @@ -11193,22 +11194,24 @@ namespace: zebrafish_anatomy def: "Skeleton that consists of the supporting endochondral proximal and distal radials and the dermal fins rays or lepidotrichia. The pectoral fin skeleton is located in the thoracic region of the body and articulates with the scapula and coracoid." [TAO:curator] xref: TAO:0000943 is_a: ZFA:0000027 ! paired fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000944 name: posterior lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880] +def: "One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-110811-14] +synonym: "midbody lateral line" RELATED [] +synonym: "midtrunk line" RELATED [] synonym: "pll" EXACT [] xref: TAO:0000944 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0000946 @@ -11217,9 +11220,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 16 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000946 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000947 @@ -11229,9 +11232,9 @@ def: "Rod-like internal median skeletal support bones of the dorsal fin, which a synonym: "dorsal fin proximal radials" EXACT PLURAL [] xref: TAO:0000947 is_a: ZFA:0001647 ! dorsal fin radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001419 ! dorsal fin pterygiophore -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0000948 @@ -11242,8 +11245,8 @@ synonym: "r3" EXACT [] xref: TAO:0000948 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001213 ! presumptive rhombomere 3 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000949 @@ -11254,8 +11257,8 @@ synonym: "r7" EXACT [] xref: TAO:0000949 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001209 ! presumptive rhombomere 7 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000950 @@ -11264,10 +11267,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 3." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000950 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000951 @@ -11276,10 +11279,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000951 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000952 @@ -11288,9 +11291,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 1 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000952 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000072 ! somite 1 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0000953 @@ -11299,9 +11302,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 12 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000953 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000954 @@ -11310,9 +11313,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 15 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000954 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000955 @@ -11321,9 +11324,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 18 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000955 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000956 @@ -11332,9 +11335,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 20 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000956 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000156 ! somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000957 @@ -11343,9 +11346,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 19 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000957 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000958 @@ -11354,9 +11357,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 23 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000958 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000730 ! somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000959 @@ -11365,9 +11368,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 26 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000959 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000074 ! somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000960 @@ -11376,9 +11379,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 29 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000960 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000981 ! somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000961 @@ -11387,9 +11390,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 4 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000961 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000857 ! somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000962 @@ -11398,9 +11401,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 7 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0000962 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000733 ! somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000963 @@ -11411,9 +11414,9 @@ subset: cell_slim synonym: "slow muscle cells somite 1" EXACT PLURAL [] xref: TAO:0000963 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000924 ! myotome somite 1 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000964 @@ -11424,9 +11427,9 @@ subset: cell_slim synonym: "slow muscle cells somite 12" EXACT PLURAL [] xref: TAO:0000964 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000926 ! myotome somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000965 @@ -11437,9 +11440,9 @@ subset: cell_slim synonym: "slow muscle cells somite 15" EXACT PLURAL [] xref: TAO:0000965 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000802 ! myotome somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000966 @@ -11450,9 +11453,9 @@ subset: cell_slim synonym: "slow muscle cells somite 18" EXACT PLURAL [] xref: TAO:0000966 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000803 ! myotome somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000967 @@ -11463,9 +11466,9 @@ subset: cell_slim synonym: "slow muscle cells somite 20" EXACT PLURAL [] xref: TAO:0000967 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000804 ! myotome somite 20 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000968 @@ -11474,9 +11477,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 21 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000968 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000969 @@ -11487,9 +11490,9 @@ subset: cell_slim synonym: "slow muscle cells somite 23" EXACT PLURAL [] xref: TAO:0000969 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000805 ! myotome somite 23 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000970 @@ -11500,9 +11503,9 @@ subset: cell_slim synonym: "slow muscle cells somite 26" EXACT PLURAL [] xref: TAO:0000970 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000807 ! myotome somite 26 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000971 @@ -11513,9 +11516,9 @@ subset: cell_slim synonym: "slow muscle cells somite 29" EXACT PLURAL [] xref: TAO:0000971 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000808 ! myotome somite 29 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000972 @@ -11526,9 +11529,9 @@ subset: cell_slim synonym: "slow muscle cells somite 4" EXACT PLURAL [] xref: TAO:0000972 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000809 ! myotome somite 4 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000973 @@ -11539,9 +11542,9 @@ subset: cell_slim synonym: "slow muscle cells somite 7" EXACT PLURAL [] xref: TAO:0000973 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000810 ! myotome somite 7 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000974 @@ -11550,8 +11553,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 10 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000974 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000975 @@ -11560,8 +11563,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 13 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000975 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000976 @@ -11570,8 +11573,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 16 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000976 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000977 @@ -11580,8 +11583,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk or tail segment 19 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000977 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0000978 @@ -11590,8 +11593,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 22 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000978 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000979 @@ -11600,9 +11603,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 24 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000979 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000980 @@ -11611,8 +11614,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 25 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000980 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0000981 @@ -11621,8 +11624,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early tail segment 29 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000981 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0000982 @@ -11631,8 +11634,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 6 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000982 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000983 @@ -11641,8 +11644,8 @@ namespace: zebrafish_anatomy def: "Undifferentiated mesodermal component of early trunk segment 9 or metamere, derived from paraxial mesoderm; forms the myotome, sclerotome and perhaps dermatome." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000983 is_a: ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000984 @@ -11650,9 +11653,9 @@ name: superior reticular formation tegmentum namespace: zebrafish_anatomy xref: TAO:0000984 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000985 @@ -11660,9 +11663,9 @@ name: ventral rhombencephalic commissure medulla oblongata namespace: zebrafish_anatomy xref: TAO:0000985 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000986 @@ -11671,9 +11674,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 27 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000986 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000931 ! myotome somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000987 @@ -11682,9 +11685,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 3 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000987 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000932 ! myotome somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000988 @@ -11693,9 +11696,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 5 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000988 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000933 ! myotome somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000989 @@ -11704,9 +11707,9 @@ namespace: zebrafish_anatomy def: "The hypaxial region of somite 8 derived body wall muscle. The hypaxial region is ventral to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000989 is_a: ZFA:0001085 ! hypaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000934 ! myotome somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000990 @@ -11714,8 +11717,8 @@ name: intermediate mesenchyme namespace: zebrafish_anatomy xref: TAO:0000990 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000991 @@ -11724,9 +11727,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 10 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0000991 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000992 @@ -11734,9 +11737,9 @@ name: lateral migration pathway mesenchyme namespace: zebrafish_anatomy xref: TAO:0000992 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000999 ! mesenchyme derived from trunk neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000993 @@ -11745,9 +11748,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue located at either side of the neural rod." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000993 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000994 @@ -11756,9 +11759,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 3." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000994 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000995 @@ -11767,9 +11770,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the neural tube in rhombomere 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000995 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0000996 @@ -11778,9 +11781,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure forming the sides of the lumen of the spinal cord." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0000996 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0000997 @@ -11790,8 +11793,8 @@ def: "Sensory trigeminal nucleus located at the end of the medulla oblongata." [ synonym: "medial funicular nucleus trigeminal nuclei" EXACT PLURAL [] xref: TAO:0000997 is_a: ZFA:0000433 ! sensory trigeminal nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0000998 @@ -11799,8 +11802,8 @@ name: mesenchyme derived from head mesoderm namespace: zebrafish_anatomy xref: TAO:0000998 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0000999 @@ -11808,8 +11811,8 @@ name: mesenchyme derived from trunk neural crest namespace: zebrafish_anatomy xref: TAO:0000999 is_a: ZFA:0000081 ! trunk mesenchyme -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001000 @@ -11820,9 +11823,9 @@ synonym: "mesenchyme pectoral fins" EXACT PLURAL [] xref: TAO:0001000 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0000789 ! mesoderm pectoral fin bud -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001001 @@ -11831,9 +11834,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 13 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001001 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001002 @@ -11852,9 +11855,9 @@ subset: cell_slim synonym: "muscle pioneers somite 12" EXACT PLURAL [] xref: TAO:0001003 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000851 ! somite 12 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001004 @@ -11865,9 +11868,9 @@ subset: cell_slim synonym: "muscle pioneers somite 15" EXACT PLURAL [] xref: TAO:0001004 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000852 ! somite 15 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001005 @@ -11878,9 +11881,9 @@ subset: cell_slim synonym: "muscle pioneers somite 18" EXACT PLURAL [] xref: TAO:0001005 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000853 ! somite 18 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001006 @@ -11891,9 +11894,9 @@ subset: cell_slim synonym: "muscle pioneers somite 21" EXACT PLURAL [] xref: TAO:0001006 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001007 @@ -11904,9 +11907,9 @@ subset: cell_slim synonym: "muscle pioneers somite 24" EXACT PLURAL [] xref: TAO:0001007 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001008 @@ -11917,9 +11920,9 @@ subset: cell_slim synonym: "muscle pioneers somite 27" EXACT PLURAL [] xref: TAO:0001008 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001009 @@ -11930,9 +11933,9 @@ subset: cell_slim synonym: "muscle pioneers somite 3" EXACT PLURAL [] xref: TAO:0001009 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001010 @@ -11943,9 +11946,9 @@ subset: cell_slim synonym: "muscle pioneers somite 5" EXACT PLURAL [] xref: TAO:0001010 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001011 @@ -11956,9 +11959,9 @@ subset: cell_slim synonym: "muscle pioneers somite 8" EXACT PLURAL [] xref: TAO:0001011 is_a: ZFA:0001086 ! muscle pioneer -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001012 @@ -11967,9 +11970,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 16 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001012 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001013 @@ -11978,9 +11981,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 10 that gives rise to body wall muscle masses." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001013 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001014 @@ -11989,9 +11992,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 13 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001014 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001015 @@ -12000,9 +12003,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 17 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001015 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000727 ! somite 17 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001016 @@ -12011,9 +12014,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 2 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001016 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000728 ! somite 2 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001017 @@ -12022,9 +12025,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 22 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001017 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000978 ! somite 22 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001018 @@ -12033,9 +12036,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 25 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001018 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000980 ! somite 25 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001019 @@ -12044,9 +12047,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 28 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001019 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000856 ! somite 28 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001020 @@ -12055,9 +12058,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 30 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001020 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000157 ! somite 30 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001021 @@ -12066,9 +12069,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 6 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001021 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000982 ! somite 6 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001022 @@ -12077,9 +12080,9 @@ namespace: zebrafish_anatomy def: "Portion of somite 9 that gives rise to body wall muscle masses." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001022 is_a: ZFA:0001056 ! myotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000983 ! somite 9 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001023 @@ -12088,9 +12091,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 19 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001023 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001024 @@ -12099,8 +12102,8 @@ namespace: zebrafish_anatomy def: "Neural crest that is part of the trunk." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001024 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001025 @@ -12111,9 +12114,9 @@ synonym: "neuromast occipital" EXACT [] synonym: "neuromasts occipital" EXACT PLURAL [] xref: TAO:0001025 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000400 ! occipital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001026 @@ -12124,9 +12127,9 @@ synonym: "neuromast supraorbital" EXACT [] synonym: "neuromasts supraorbital" EXACT PLURAL [] xref: TAO:0001026 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000443 ! supraorbital lateral line -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001027 @@ -12137,9 +12140,9 @@ synonym: "buccal cavity" EXACT [] synonym: "buccal chamber" EXACT [] xref: TAO:0001027 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001028 @@ -12151,9 +12154,9 @@ synonym: "parhypurapophysis" EXACT [] synonym: "parhypurapophysis process" EXACT [] xref: TAO:0001028 is_a: ZFA:0000859 ! specialized hemal arch and spine -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000438 ! parhypural -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001029 @@ -12164,9 +12167,9 @@ synonym: "ILM" EXACT [] synonym: "inner limiting membranes" EXACT PLURAL [] xref: TAO:0001029 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001030 @@ -12175,9 +12178,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 21 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001030 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000929 ! myotome somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001031 @@ -12188,8 +12191,8 @@ synonym: "r1" EXACT [] xref: TAO:0001031 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001207 ! presumptive rhombomere 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001032 @@ -12200,8 +12203,8 @@ synonym: "r4" EXACT [] xref: TAO:0001032 is_a: ZFA:0001064 ! rhombomere relationship: develops_from ZFA:0001212 ! presumptive rhombomere 4 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001033 @@ -12210,10 +12213,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 1." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001033 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001034 @@ -12222,10 +12225,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001034 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001035 @@ -12234,10 +12237,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of rhombomere 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001035 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0001311 ! roof plate rhombomere region -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001036 @@ -12246,9 +12249,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 10 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001036 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000974 ! somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001037 @@ -12257,9 +12260,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 13 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001037 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000975 ! somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001038 @@ -12268,9 +12271,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 16 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001038 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000976 ! somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001039 @@ -12279,9 +12282,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 19 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001039 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000977 ! somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001040 @@ -12290,9 +12293,9 @@ namespace: zebrafish_anatomy def: "The epaxial region of somite 24 derived body wall muscle. The epaxial region is dorsal to the horizontal myoseptum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001040 is_a: ZFA:0001084 ! epaxial myotome region -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000930 ! myotome somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001041 @@ -12301,9 +12304,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 21 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001041 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000854 ! somite 21 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001042 @@ -12312,9 +12315,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 24 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001042 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000855 ! somite 24 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001043 @@ -12323,9 +12326,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 27 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001043 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000731 ! somite 27 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001044 @@ -12334,9 +12337,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 3 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001044 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000732 ! somite 3 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001045 @@ -12345,9 +12348,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 5 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001045 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000073 ! somite 5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001046 @@ -12356,9 +12359,9 @@ namespace: zebrafish_anatomy def: "Ventromedial region of somite 8 that will form vertebral cartilages and connective tissues. The sclerotome lies ventral to the myotome. Cells of the sclerotome will migrate dorsally to surround the notochord and neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576, ZFIN:ZDB-PUB-970213-3] xref: TAO:0001046 is_a: ZFA:0001080 ! sclerotome -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000858 ! somite 8 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001047 @@ -12369,9 +12372,9 @@ subset: cell_slim synonym: "slow muscle cells somite 10" EXACT PLURAL [] xref: TAO:0001047 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001013 ! myotome somite 10 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001048 @@ -12382,9 +12385,9 @@ subset: cell_slim synonym: "slow muscle cells somite 13" EXACT PLURAL [] xref: TAO:0001048 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001014 ! myotome somite 13 -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001049 @@ -12395,9 +12398,9 @@ subset: cell_slim synonym: "slow muscle cells somite 16" EXACT PLURAL [] xref: TAO:0001049 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000927 ! myotome somite 16 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001050 @@ -12408,9 +12411,9 @@ subset: cell_slim synonym: "slow muscle cells somite 19" EXACT PLURAL [] xref: TAO:0001050 is_a: ZFA:0009116 ! slow muscle cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000928 ! myotome somite 19 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001051 @@ -12422,9 +12425,9 @@ synonym: "posterior cerebral carotid artery" EXACT [] synonym: "posterior rami of the cerebral carotid artery" EXACT [] xref: TAO:0001051 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005081 ! internal carotid artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001052 @@ -12435,9 +12438,9 @@ synonym: "medial head vein" EXACT [] synonym: "PHBC" EXACT [] xref: TAO:0001052 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001053 @@ -12447,8 +12450,8 @@ def: "Artery that originates as rostral extensions of the paired lateral dorsal synonym: "PICA" EXACT [] xref: TAO:0001053 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001054 @@ -12458,8 +12461,8 @@ def: "Connect the outflow of the aortic arches to the dorsal aorta. The place wh synonym: "LDA" EXACT [] xref: TAO:0001054 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001055 @@ -12470,10 +12473,10 @@ synonym: "pronephric duct openings" EXACT PLURAL [] synonym: "urogenital opening" RELATED [ZFIN:ZDB-PUB-060508-11] xref: TAO:0001055 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct relationship: part_of ZFA:0000330 ! cloacal chamber -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001056 @@ -12484,9 +12487,9 @@ synonym: "myomeres" EXACT [ZFIN:ZDB-PUB-961014-576] xref: TAO:0001056 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000155 ! somite -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001057 @@ -12497,8 +12500,8 @@ synonym: "ISV" EXACT [] xref: TAO:0001057 is_a: ZFA:0000082 ! vein is_a: ZFA:0001285 ! intersegmental vessel -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001058 @@ -12510,9 +12513,9 @@ synonym: "tail fin" EXACT [] xref: TAO:0001058 is_a: ZFA:0005597 ! median fin relationship: develops_from ZFA:0001069 ! ventral fin fold -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001059 @@ -12525,9 +12528,9 @@ synonym: "CrDI" EXACT [] synonym: "rostral division of the internal carotid artery" EXACT [] xref: TAO:0001059 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005081 ! internal carotid artery -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001060 @@ -12537,8 +12540,8 @@ def: "Basidorsals are bilaterally paired cartilages on the dorsolateral side of synonym: "arcualia" RELATED [] xref: TAO:0001060 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000039 ! larval:days 7-13 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001061 @@ -12549,8 +12552,8 @@ synonym: "intersegmental arteries" EXACT PLURAL [] xref: TAO:0001061 is_a: ZFA:0000005 ! artery is_a: ZFA:0001285 ! intersegmental vessel -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001062 @@ -12560,8 +12563,8 @@ def: "Artery that branches dorsally from the cranial division of the internal ca synonym: "PMsA" EXACT [] xref: TAO:0001062 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001063 @@ -12569,9 +12572,9 @@ name: posterior caudal vein namespace: zebrafish_anatomy xref: TAO:0001063 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001064 @@ -12583,9 +12586,9 @@ synonym: "neuromere" RELATED [] synonym: "rhombomeres" EXACT PLURAL [] xref: TAO:0001064 is_a: ZFA:0001328 ! neuromere -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001065 @@ -12593,8 +12596,8 @@ name: lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001065 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000027 ! segmentation:20-25 somites +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001066 @@ -12605,9 +12608,9 @@ synonym: "dorsal arcocentrum" EXACT [] xref: TAO:0001066 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001060 ! basidorsal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001189 ! vertebra -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001067 @@ -12618,9 +12621,9 @@ synonym: "ACeV" EXACT [] synonym: "rostral cerebral vein" EXACT [] xref: TAO:0001067 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001068 @@ -12631,8 +12634,8 @@ synonym: "MsA" EXACT [] xref: TAO:0001068 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001062 ! primitive mesencephalic artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001069 @@ -12644,9 +12647,9 @@ synonym: "tail fin fold" EXACT [] synonym: "ventral fin" EXACT [] xref: TAO:0001069 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001070 @@ -12656,9 +12659,9 @@ def: "Presumptive structure part of the intermediate mesoderm, that is fated to synonym: "nephron primordium" EXACT [] xref: TAO:0001070 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001206 ! intermediate mesoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001071 @@ -12669,9 +12672,9 @@ synonym: "inner layer optic cup" EXACT [] synonym: "presumptive retinas" EXACT PLURAL [] xref: TAO:0001071 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001072 @@ -12682,9 +12685,9 @@ synonym: "thyroid follicles" EXACT PLURAL [] xref: TAO:0001072 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001081 ! thyroid primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001073 @@ -12693,8 +12696,8 @@ namespace: zebrafish_anatomy def: "Vasculature that runs along the rostral-caudal axis of the fish." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001073 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001074 @@ -12705,9 +12708,9 @@ comment: Taste buds are made up of vertically oriented, elongate cells form the synonym: "taste buds" EXACT PLURAL [] xref: TAO:0001074 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001075 @@ -12717,9 +12720,9 @@ def: "The narrow cleft along the medial wall of the lateral ventricle along the synonym: "choroidal fissures" EXACT PLURAL [] xref: TAO:0001075 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001076 @@ -12732,9 +12735,9 @@ synonym: "foregut" RELATED [] xref: TAO:0001076 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001077 @@ -12746,9 +12749,9 @@ xref: TAO:0001077 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000818 ! vagal neural crest relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001078 @@ -12758,9 +12761,9 @@ def: "Paired organ where maturation of T-lymphocytes occurs. The adult thymus lo xref: TAO:0001078 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0001077 ! thymus primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001079 @@ -12771,8 +12774,8 @@ synonym: "blood vessel" RELATED [] xref: TAO:0001079 is_a: ZFA:0001490 ! cavitated compound organ is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001080 @@ -12783,8 +12786,8 @@ synonym: "sclerotomes" EXACT PLURAL [] xref: TAO:0001080 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000155 ! somite -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001081 @@ -12795,9 +12798,9 @@ synonym: "thyroid primordia" EXACT PLURAL [] xref: TAO:0001081 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001082 @@ -12806,9 +12809,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is posterior to the developing notochord during tail bud extension." [ZFIN:ZDB-PUB-970723-15] xref: TAO:0001082 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000077 ! tail bud -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001083 @@ -12818,9 +12821,9 @@ def: "Proliferative region that is part of the ventricular system. The cells di synonym: "ventricular zones" EXACT PLURAL [] xref: TAO:0001083 is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001084 @@ -12829,9 +12832,9 @@ namespace: zebrafish_anatomy synonym: "epaxial myotome regions" EXACT PLURAL [] xref: TAO:0001084 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001085 @@ -12840,9 +12843,9 @@ namespace: zebrafish_anatomy synonym: "hypaxial muscle" EXACT [] xref: TAO:0001085 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001086 @@ -12855,9 +12858,9 @@ synonym: "non migratory adaxial cells" EXACT [] xref: TAO:0001086 is_a: ZFA:0009114 ! muscle cell relationship: develops_from ZFA:0000003 ! adaxial cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001089 @@ -12867,9 +12870,9 @@ synonym: "myocommata" EXACT [ZFIN:ZDB-PUB-151106-17] synonym: "myosepta" EXACT PLURAL [] xref: TAO:0001089 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001056 ! myotome -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001093 @@ -12878,8 +12881,8 @@ namespace: zebrafish_anatomy def: "Annotation with this anatomy term indicates that a structure was not specified by the author." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001093 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001094 @@ -12890,8 +12893,8 @@ synonym: "multi-cellular organism" EXACT [] xref: CARO:0000012 xref: TAO:0001094 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001095 @@ -12903,9 +12906,9 @@ synonym: "immature sensory patch" EXACT [] synonym: "immature sensory patches" EXACT PLURAL [] xref: TAO:0001095 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0000051 ! otic vesicle -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001096 @@ -12915,9 +12918,9 @@ def: "Is an otic sensory epithelium that will develop into the mature anterior m synonym: "immature anterior maculae" EXACT PLURAL [] xref: TAO:0001096 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001095 ! immature macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001097 @@ -12927,9 +12930,9 @@ def: "Is an otic sensory epithelium that will develop into the mature posterior synonym: "immature posterior maculae" EXACT PLURAL [] xref: TAO:0001097 is_a: ZFA:0007070 ! otic sensory epithelium -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001095 ! immature macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001098 @@ -12940,9 +12943,9 @@ subset: cell_slim synonym: "immature sensory hair cells anterior macula" EXACT PLURAL [] xref: TAO:0001098 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001096 ! immature anterior macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001099 @@ -12953,9 +12956,9 @@ subset: cell_slim synonym: "immature sensory hair cells posterior macula" EXACT PLURAL [] xref: TAO:0001099 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001097 ! immature posterior macula -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001100 @@ -12964,9 +12967,9 @@ namespace: zebrafish_anatomy def: "A duct that carries bile from the liver to the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001100 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001101 @@ -12975,8 +12978,8 @@ namespace: zebrafish_anatomy def: "Sensory system that uses taste buds to sense chemical compounds." [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0001101 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001104 @@ -12985,9 +12988,9 @@ namespace: zebrafish_anatomy xref: TAO:0001104 is_a: ZFA:0000017 ! endoderm disjoint_from: ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001105 @@ -12997,9 +13000,9 @@ def: "Anatomical structure that is part of the embryo and is comprised of portio synonym: "embryonic structures" EXACT PLURAL [] xref: TAO:0001105 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001106 @@ -13010,10 +13013,10 @@ synonym: "pharyngeal pouches" EXACT PLURAL [] xref: TAO:0001106 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0001306 ! pharyngeal arch -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001107 @@ -13024,9 +13027,9 @@ synonym: "internal gill buds" EXACT PLURAL [] xref: TAO:0001107 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001108 @@ -13038,8 +13041,8 @@ synonym: "commissura rostral" EXACT [] synonym: "rostral commissure" EXACT [] xref: TAO:0001108 is_a: ZFA:0000597 ! telencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001109 @@ -13053,9 +13056,9 @@ synonym: "egg" RELATED [] xref: CL:0000023 xref: TAO:0001109 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001110 @@ -13065,9 +13068,9 @@ def: "Oocyte development of zebrafish has been divided into five stages based on synonym: "egg follicle" EXACT [] xref: TAO:0001110 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000403 ! ovary -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001111 @@ -13077,9 +13080,9 @@ def: "Acellular anatomic structure that is a layer that separates the developin synonym: "vitelline envelope" EXACT [] xref: TAO:0001111 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001112 @@ -13089,9 +13092,9 @@ def: "Portion of tissue part of the ovarian follicle containing a single layer o synonym: "granulosa cell layers" EXACT PLURAL [] xref: TAO:0001112 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001113 @@ -13101,9 +13104,9 @@ def: "Multi-tissue structure of the ovarian follicle, composed of stromal cells synonym: "thecal cell layers" EXACT PLURAL [] xref: TAO:0001113 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001114 @@ -13112,8 +13115,8 @@ namespace: zebrafish_anatomy def: "Organism subdivision which is the part of the body which consists of the cranial and pharyngeal regions." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001114 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001115 @@ -13123,8 +13126,8 @@ def: "Organism subdivision which is the part of the body posterior to the head a xref: TAO:0001115 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001116 @@ -13134,8 +13137,8 @@ def: "Portion of embryonic tissue determined by fate mapping to become a structu synonym: "presumptive structures" EXACT PLURAL [] xref: TAO:0001116 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0001117 @@ -13146,8 +13149,8 @@ synonym: "tail" RELATED [] xref: TAO:0001117 is_a: ZFA:0001308 ! organism subdivision relationship: develops_from ZFA:0000077 ! tail bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001118 @@ -13161,9 +13164,9 @@ synonym: "UGP" EXACT [] synonym: "urogenital papillae" EXACT PLURAL [] xref: TAO:0001118 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001119 @@ -13174,9 +13177,9 @@ xref: TAO:0001119 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000255 ! paraxial mesoderm relationship: develops_from ZFA:0000787 ! mesenchyme derived from head neural crest -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001120 @@ -13186,9 +13189,9 @@ synonym: "neural ectoderm" EXACT [] synonym: "neurectoderm" EXACT [] xref: TAO:0001120 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001121 @@ -13197,8 +13200,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become the shield. Defined by fate mapping." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001121 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000018 ! Gastrula:Germ-ring -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000018 ! gastrula:germ-ring +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0001122 @@ -13208,8 +13211,8 @@ def: "Portion of tissue that consists of a layer of cells that form during embry synonym: "embryonic germ layers" EXACT [] xref: TAO:0001122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000038 ! Larval:Day 6 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000038 ! larval:day 6 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001123 @@ -13220,8 +13223,8 @@ synonym: "median fin skeleton" EXACT [] synonym: "unpaired fin skeleton" EXACT [] xref: TAO:0001123 is_a: ZFA:0000317 ! postcranial axial skeleton -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001124 @@ -13230,9 +13233,9 @@ namespace: zebrafish_anatomy def: "Median fin skeleton located on the dorsal surface of the organism." [TAO:curator] xref: TAO:0001124 is_a: ZFA:0001123 ! axial fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001173 ! dorsal fin -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001125 @@ -13242,9 +13245,9 @@ def: "The dorsal marginal region of the YSL where maternal dorsal determinants l synonym: "Nieuwkoop center" EXACT [] xref: TAO:0001125 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000019 ! Gastrula:Shield +relationship: end ZFS:0000019 ! gastrula:shield relationship: part_of ZFA:0000088 ! yolk syncytial layer -relationship: start ZFS:0000012 ! Blastula:High +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001126 @@ -13255,9 +13258,9 @@ synonym: "NEM" EXACT [] synonym: "noninvoluting endocytic marginal cells" EXACT PLURAL [] xref: TAO:0001126 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000017 ! gastrula:50%-epiboly relationship: part_of ZFA:0000038 ! margin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001127 @@ -13266,8 +13269,8 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for the perception of light." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001127 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001128 @@ -13276,8 +13279,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 1" EXACT PLURAL [] xref: TAO:0001128 is_a: ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001129 @@ -13285,8 +13288,8 @@ name: pharyngeal pouches 2-6 namespace: zebrafish_anatomy xref: TAO:0001129 is_a: ZFA:0001106 ! pharyngeal pouch -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001130 @@ -13295,8 +13298,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 2" EXACT PLURAL [] xref: TAO:0001130 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001131 @@ -13305,8 +13308,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 3" EXACT PLURAL [] xref: TAO:0001131 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001132 @@ -13315,8 +13318,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 6" EXACT PLURAL [] xref: TAO:0001132 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001133 @@ -13325,8 +13328,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 5" EXACT PLURAL [] xref: TAO:0001133 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001134 @@ -13335,8 +13338,8 @@ namespace: zebrafish_anatomy synonym: "pharyngeal pouches 4" EXACT PLURAL [] xref: TAO:0001134 is_a: ZFA:0001129 ! pharyngeal pouches 2-6 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001135 @@ -13347,8 +13350,8 @@ synonym: "presumptive central nervous system" RELATED [] xref: TAO:0001135 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000133 ! neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001136 @@ -13358,9 +13361,9 @@ def: "A layer separating the inner face of the dermis from the subjacent muscle synonym: "subcutis" EXACT [] xref: TAO:0001136 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001137 @@ -13370,8 +13373,8 @@ def: "Tooth row that is the ventralmost row of teeth on ceratobranchial 5 bone." synonym: "ventral tooth rows" EXACT PLURAL [] xref: TAO:0001137 is_a: ZFA:0001642 ! tooth row -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001138 @@ -13380,8 +13383,8 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for the perception of spatial orientation and auditory stimuli." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001138 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001139 @@ -13391,8 +13394,8 @@ def: "Tooth row that is the mediodorsal row of teeth on ceratobranchial 5 bone, synonym: "mediodorsal tooth rows" EXACT PLURAL [] xref: TAO:0001139 is_a: ZFA:0001642 ! tooth row -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001140 @@ -13402,8 +13405,8 @@ def: "Tooth row that is the dorsalmost row of teeth on ceratobranchial 5 bone." synonym: "dorsal tooth rows" EXACT PLURAL [] xref: TAO:0001140 is_a: ZFA:0001642 ! tooth row -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001141 @@ -13412,9 +13415,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001141 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001142 @@ -13423,9 +13426,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001142 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001143 @@ -13434,9 +13437,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 3V and anterior to tooth 5V in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001143 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001144 @@ -13445,9 +13448,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1V and anterior to tooth 3V in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001144 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001145 @@ -13456,9 +13459,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001145 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001146 @@ -13467,9 +13470,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001146 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001147 @@ -13478,9 +13481,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1MD and anterior to tooth 3MD in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001147 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001148 @@ -13489,9 +13492,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the dorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001148 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001140 ! dorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001149 @@ -13500,8 +13503,8 @@ namespace: zebrafish_anatomy def: "Sensory system responsible for olfaction. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001149 is_a: ZFA:0000282 ! sensory system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001150 @@ -13510,9 +13513,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the dorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001150 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001140 ! dorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001151 @@ -13521,9 +13524,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001151 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001152 @@ -13532,9 +13535,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2MD and anterior to tooth 4MD in the mediodorsal tooth row." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001152 is_a: ZFA:0005851 ! ceratobranchial 5 primary tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001139 ! mediodorsal tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001153 @@ -13545,9 +13548,9 @@ synonym: "dental primordium" EXACT [] synonym: "tooth germ" EXACT [] xref: TAO:0001153 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001174 ! pharyngeal epithelium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001154 @@ -13556,9 +13559,9 @@ namespace: zebrafish_anatomy def: "Musculature part of the anal fin." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001154 is_a: ZFA:0000207 ! fin musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001162 ! anal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001155 @@ -13568,9 +13571,9 @@ def: "Nervous system that is involved primarily with the internal regulation of xref: TAO:0001155 is_a: ZFA:0001574 ! autonomic nervous system relationship: develops_from ZFA:0001334 ! presumptive enteric nervous system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001156 @@ -13580,9 +13583,9 @@ def: "Dorsolateral placode that gives rise to the posterior lateral line." [GOC: synonym: "posterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001156 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001157 @@ -13593,9 +13596,9 @@ synonym: "posterior lateral line primordia" EXACT PLURAL [] xref: TAO:0001157 is_a: ZFA:0000228 ! lateral line primordium relationship: develops_from ZFA:0001156 ! posterior lateral line placode -relationship: end ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000036 ! larval:day 4 relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001158 @@ -13604,8 +13607,8 @@ namespace: zebrafish_anatomy def: "Anatomical system that produces, transports and secretes peptides." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001158 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001159 @@ -13614,8 +13617,8 @@ namespace: zebrafish_anatomy def: "System that provides protection against foreign and abnormal cells and removes cellular debris." [ISBN:0314472304] xref: TAO:0001159 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001160 @@ -13634,8 +13637,8 @@ synonym: "pectoral fins" EXACT PLURAL [] xref: TAO:0001161 is_a: ZFA:0005596 ! paired fin relationship: develops_from ZFA:0000141 ! pectoral fin bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001162 @@ -13645,9 +13648,9 @@ def: "Median fin that is located posterior to the anus." [TAO:curator] xref: TAO:0001162 is_a: ZFA:0005597 ! median fin relationship: develops_from ZFA:0001069 ! ventral fin fold -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001163 @@ -13656,8 +13659,8 @@ namespace: zebrafish_anatomy def: "Supraneural located between vertebra 6 and 7." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001163 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001164 @@ -13667,8 +13670,8 @@ def: "Supraneural located between vertebra 5 and 6." [ZFIN:ZDB-PUB-031103-13] synonym: "sn6" EXACT [] xref: TAO:0001164 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001165 @@ -13678,8 +13681,8 @@ def: "Supraneural located between vertebra 4 and 5." [ZDB:ZDB-PUB-031103-13] synonym: "sn5" EXACT [] xref: TAO:0001165 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001166 @@ -13688,8 +13691,8 @@ namespace: zebrafish_anatomy def: "Supraneural located between vertebra 8 and 9." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001166 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001167 @@ -13699,8 +13702,8 @@ def: "Vertebra that is posteriorly adjacent to the neurocranium." [TAO:curator] synonym: "cervical vertebra 1" EXACT [] xref: TAO:0001167 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001168 @@ -13710,8 +13713,8 @@ def: "Vertebra that is posteriorly adjacent to vertebra 1." [TAO:curator] synonym: "cervical vertebra 2" EXACT [] xref: TAO:0001168 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001169 @@ -13720,8 +13723,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 2." [TAO:curator] xref: TAO:0001169 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001170 @@ -13730,8 +13733,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 3." [TAO:curator] xref: TAO:0001170 is_a: ZFA:0001190 ! Weberian vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001171 @@ -13742,10 +13745,10 @@ comment: The os suspensorium is similar in shape to a rib, but the other ribs in xref: TAO:0001171 is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000461 ! Weberian ossicle relationship: part_of ZFA:0001170 ! vertebra 4 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001172 @@ -13754,10 +13757,10 @@ namespace: zebrafish_anatomy def: "Cartilaginous larval structure dorsal to the four anterior-most vertebrae, which forms the connection between neural arches and supraneurals in the Weberian apparatus. Located dorsal to the neural tube." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001172 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001191 ! supraneural 2 relationship: part_of ZFA:0001192 ! supraneural 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001173 @@ -13767,8 +13770,8 @@ def: "Median fin that is located on the dorsal surface of the fish." [GOC:cvs, O xref: TAO:0001173 is_a: ZFA:0005597 ! median fin relationship: develops_from ZFA:0000102 ! dorsal fin fold -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001174 @@ -13778,9 +13781,9 @@ def: "Epithelium lining the pharynx consisting largely of simple columnar epithe xref: TAO:0001174 is_a: ZFA:0001495 ! unilaminar epithelium relationship: develops_from ZFA:0001104 ! pharyngeal endoderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001175 @@ -13789,8 +13792,8 @@ namespace: zebrafish_anatomy def: "Embryonic structure that is the dome of cytoplasm that segregates from the yolk toward the animal pole during and after the one cell-stage, and which undergoes cleavage." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001175 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001176 @@ -13800,8 +13803,8 @@ def: "Embryonic structure that is composed of the cellular part of the embryo, e xref: TAO:0001176 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0001175 ! blastodisc -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0001177 @@ -13809,10 +13812,10 @@ name: roof plate spinal cord region namespace: zebrafish_anatomy xref: TAO:0001177 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000075 ! spinal cord relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001178 @@ -13821,9 +13824,9 @@ namespace: zebrafish_anatomy synonym: "ventral ectoderm" EXACT [] xref: TAO:0001178 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001179 @@ -13833,9 +13836,9 @@ def: "The outer layer of the epidermis. The living cells form single cell layer xref: TAO:0001179 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001185 ! periderm -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001180 @@ -13845,9 +13848,9 @@ def: "Lower layer of the epidermis. Composed of a single layer of cells. The ma synonym: "basal epidermal layer" EXACT [] xref: TAO:0001180 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001181 @@ -13856,9 +13859,9 @@ namespace: zebrafish_anatomy def: "The tissue which lies between the basal stratum and the superficial stratum. This layer is composed of a variable number of cell layers which contain mucous goblet cells, club cells and sensory cells. Most of the cells of this region are undifferentiated. They serve as a reservoir to replace dead cells in any of the epidermis regions." [ZFIN:ZDB-PUB-040726-12] xref: TAO:0001181 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000105 ! epidermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001182 @@ -13869,9 +13872,9 @@ synonym: "stratum compactum" EXACT [] xref: TAO:0001182 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001186 ! collagenous dermal stroma -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001183 @@ -13881,9 +13884,9 @@ def: "Outer portion of the dermis composed of a loose collagenous matrix housing synonym: "stratum laxum" EXACT [] xref: TAO:0001183 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001184 @@ -13894,8 +13897,8 @@ synonym: "pelvic fins" EXACT PLURAL [] xref: TAO:0001184 is_a: ZFA:0005596 ! paired fin relationship: develops_from ZFA:0001384 ! pelvic fin bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001185 @@ -13906,9 +13909,9 @@ synonym: "EVL" RELATED [] xref: TAO:0001185 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000086 ! EVL -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001186 @@ -13918,9 +13921,9 @@ def: "Acellular anatomical structure that is a layer of collagen fibrils in the synonym: "primary dermal stroma" EXACT [] xref: TAO:0001186 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001187 @@ -13930,9 +13933,9 @@ def: "Embryonic structure that gives rise to the midbrain hindbrain boundary." [ synonym: "presumptive midbrain-hindbrain boundary" EXACT [] xref: TAO:0001187 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001188 @@ -13941,9 +13944,9 @@ namespace: zebrafish_anatomy def: "The Weberian apparatus consists of the modified anteriormost four vertebrae and associated structures of otophysans which transduce sound or pressure waves from the tunica externa of the swim bladder to the inner ear (Alexander, 1962)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001188 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001189 @@ -13953,9 +13956,9 @@ def: "All serially repeated ossified, cartilaginous, and ligamentous elements ar synonym: "vertebrae" EXACT PLURAL [] xref: TAO:0001189 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001190 @@ -13965,9 +13968,9 @@ def: "The first four vertebrae, which are part of the Weberian apparatus." [GOC: synonym: "Weberian vertebrae" EXACT PLURAL [] xref: TAO:0001190 is_a: ZFA:0000263 ! precaudal vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001191 @@ -13978,9 +13981,9 @@ synonym: "small supraneural" EXACT [] synonym: "sn2" EXACT [] xref: TAO:0001191 is_a: ZFA:0000442 ! supraneural -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001363 ! neural complex -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001192 @@ -13991,9 +13994,9 @@ synonym: "large supraneural" EXACT [] synonym: "sn3" EXACT [] xref: TAO:0001192 is_a: ZFA:0000442 ! supraneural -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001363 ! neural complex -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001193 @@ -14002,8 +14005,8 @@ namespace: zebrafish_anatomy def: "Supraneural located between vertebra 7 and 8." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001193 is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001194 @@ -14012,8 +14015,8 @@ namespace: zebrafish_anatomy def: "Neural crest that is part of the head." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001194 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001195 @@ -14023,9 +14026,9 @@ def: "The anterior portion of the adenohypophysis. Comprised of the proximal and synonym: "pars distalis" EXACT [] xref: TAO:0001195 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001282 ! adenohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001196 @@ -14042,9 +14045,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of the adenohypophysis." [ZFIN:ZDB-PUB-080616-4] xref: TAO:0001197 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001282 ! adenohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001198 @@ -14055,8 +14058,8 @@ synonym: "pituitary placode" EXACT [] xref: TAO:0001198 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001178 ! non neural ectoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001199 @@ -14068,9 +14071,9 @@ synonym: "infundibulum of hypothalamus" EXACT [] synonym: "pituitary stalk" EXACT [] xref: TAO:0001199 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001271 ! neurohypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001200 @@ -14079,8 +14082,8 @@ namespace: zebrafish_anatomy def: "Islands of eosinic cells found on the lateroventral surface of the kidney. Function is thought to be that of the parathyroid gland in other vertebrates, which are lacking in fishes. These cells secrete hypocalcin (teleocalcin) to regulate calcium metabolism." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001200 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001201 @@ -14088,9 +14091,9 @@ name: ventral lateral mesoderm namespace: zebrafish_anatomy xref: TAO:0001201 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000083 ! ventral mesoderm -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0001202 @@ -14101,9 +14104,9 @@ synonym: "eye cup" EXACT [] xref: TAO:0001202 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000050 ! optic vesicle -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001203 @@ -14116,9 +14119,9 @@ synonym: "ciliary body" RELATED [] synonym: "ciliary epithelial zone" EXACT [] xref: TAO:0001203 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001204 @@ -14128,8 +14131,8 @@ def: "Region of the mesoderm that is located along the rostral-caudal axis of th xref: TAO:0001204 is_a: ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0001378 ! axial hypoblast -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001205 @@ -14139,10 +14142,10 @@ def: "Meckel's cartilage is the bilaterally paired, rod-like, cartilaginous vent synonym: "ventral mandibular cartilage" EXACT [] xref: TAO:0001205 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0007117 ! Meckel's cartilage-palatoquadrate cartilage joint relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001206 @@ -14151,8 +14154,8 @@ namespace: zebrafish_anatomy synonym: "IM" EXACT [] xref: TAO:0001206 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001207 @@ -14161,9 +14164,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001207 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001208 @@ -14172,9 +14175,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 2." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001208 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001209 @@ -14183,9 +14186,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 7." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001209 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001210 @@ -14194,9 +14197,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 6." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001210 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001211 @@ -14205,9 +14208,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 5." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001211 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001212 @@ -14216,9 +14219,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 4." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001212 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001213 @@ -14227,9 +14230,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001213 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001214 @@ -14238,9 +14241,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, part of the neural keel, that gives rise to rhombomere 8." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001214 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007029 ! hindbrain neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001215 @@ -14250,9 +14253,9 @@ def: "Multi-tissue structure that is paired, and is situated one on either side synonym: "thalami" EXACT PLURAL [] xref: TAO:0001215 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001216 @@ -14264,9 +14267,9 @@ synonym: "pharyngeal skeleton" EXACT [] xref: TAO:0001216 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0005771 ! ectomesenchyme -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001217 @@ -14275,8 +14278,8 @@ namespace: zebrafish_anatomy def: "Tissue along the lateral edges of the shield that is fated to develop into the hypochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001217 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001218 @@ -14285,9 +14288,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure, the part of the neural plate fated to become floor plate." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001218 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001220 @@ -14297,9 +14300,9 @@ def: "Pharyngeal arch cartilage that is ventral, median, and associated with mor synonym: "copulae" EXACT PLURAL [] xref: TAO:0001220 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001221 @@ -14309,8 +14312,8 @@ def: "Copula that is ventral, median, and associated with pharyngeal arches 3-5. synonym: "anterior copula" EXACT [] xref: TAO:0001221 is_a: ZFA:0001220 ! copula -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001222 @@ -14320,8 +14323,8 @@ def: "Copula that is ventral, median, and associated with pharyngeal arches 6-7. synonym: "posterior copula" EXACT [] xref: TAO:0001222 is_a: ZFA:0001220 ! copula -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001223 @@ -14331,8 +14334,8 @@ def: "Basibranchial 1 ossifies posterior to the basihyal and anterior to the fir xref: TAO:0001223 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001224 @@ -14342,8 +14345,8 @@ def: "Basibranchial 2 ossifies in copula 1 posterior to the first hypobranchials xref: TAO:0001224 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001225 @@ -14353,8 +14356,8 @@ def: "Basibranchial 3 ossifies in copula 1 posterior to the second hypobranchial xref: TAO:0001225 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001221 ! copula 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001226 @@ -14364,8 +14367,8 @@ def: "Occasionally, a fourth basibranchial ossifies in the narrow copula 2 carti xref: TAO:0001226 is_a: ZFA:0000170 ! basibranchial relationship: develops_from ZFA:0001222 ! copula 2 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001227 @@ -14379,10 +14382,10 @@ synonym: "oral jaw skeleton" EXACT [] synonym: "pharyngeal arch 1 skeleton" EXACT [] xref: TAO:0001227 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: part_of ZFA:0001612 ! pharyngeal arch 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001228 @@ -14394,10 +14397,10 @@ synonym: "gill arch 1 skeleton" EXACT [] synonym: "visceral arch 3 skeleton" EXACT [] xref: TAO:0001228 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001606 ! pharyngeal arch 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001229 @@ -14409,10 +14412,10 @@ synonym: "gill arch 5 skeleton" EXACT [] synonym: "visceral arch 7 skeleton" EXACT [] xref: TAO:0001229 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001610 ! pharyngeal arch 7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001230 @@ -14424,10 +14427,10 @@ synonym: "gill arch 4 skeleton" EXACT [] synonym: "visceral arch 6 skeleton" EXACT [] xref: TAO:0001230 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001609 ! pharyngeal arch 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001231 @@ -14439,10 +14442,10 @@ synonym: "gill arch 2 skeleton" EXACT [] synonym: "visceral arch 4 skeleton" EXACT [] xref: TAO:0001231 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001607 ! pharyngeal arch 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001232 @@ -14454,10 +14457,10 @@ synonym: "gill arch 3 skeleton" EXACT [] synonym: "visceral arch 5 skeleton" EXACT [] xref: TAO:0001232 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton relationship: part_of ZFA:0001608 ! pharyngeal arch 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001233 @@ -14468,9 +14471,9 @@ synonym: "hypobranchial 1 bones" EXACT PLURAL [] xref: TAO:0001233 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001524 ! hypobranchial 1 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001234 @@ -14482,9 +14485,9 @@ synonym: "hypobranchial 4 bones" EXACT PLURAL [] xref: TAO:0001234 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001523 ! hypobranchial 4 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001235 @@ -14495,9 +14498,9 @@ synonym: "hypobranchial 3 bones" EXACT PLURAL [] xref: TAO:0001235 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001526 ! hypobranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001236 @@ -14508,9 +14511,9 @@ synonym: "hypobranchial 2 bones" EXACT PLURAL [] xref: TAO:0001236 is_a: ZFA:0000363 ! hypobranchial bone relationship: develops_from ZFA:0001525 ! hypobranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001237 @@ -14520,9 +14523,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001237 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001520 ! ceratobranchial 1 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001238 @@ -14532,9 +14535,9 @@ def: "Multi-tissue structure that consists of pigmented stroma and is connected synonym: "irises" EXACT PLURAL [] xref: TAO:0001238 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001239 @@ -14544,9 +14547,9 @@ def: "Ceratobranchial bone that is the most posterior, bilaterally paired ventra xref: TAO:0001239 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001521 ! ceratobranchial 5 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001240 @@ -14556,9 +14559,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001240 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001519 ! ceratobranchial 4 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001241 @@ -14568,9 +14571,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001241 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001518 ! ceratobranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001242 @@ -14580,9 +14583,9 @@ def: "Ceratobranchial bone that is bilaterally paired and articulates laterally xref: TAO:0001242 is_a: ZFA:0000488 ! ceratobranchial bone relationship: develops_from ZFA:0001517 ! ceratobranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001243 @@ -14592,9 +14595,9 @@ def: "Epibranchial bone that is bilaterally paired and articulates laterally wit xref: TAO:0001243 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001528 ! epibranchial 1 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001244 @@ -14604,9 +14607,9 @@ def: "Epibranchial cartilage that is bilaterally paired and appears as a separat synonym: "interbranchial IV" EXACT [] xref: TAO:0001244 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001245 @@ -14616,9 +14619,9 @@ def: "Epibranchial bone that is bilaterally paired and articulates laterally wit xref: TAO:0001245 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001531 ! epibranchial 4 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001246 @@ -14628,9 +14631,9 @@ def: "Epibranchial bone that is bilaterally paired and articulates laterally wit xref: TAO:0001246 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001530 ! epibranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001247 @@ -14641,9 +14644,9 @@ synonym: "infrapharyngobranchial 3" EXACT [] xref: TAO:0001247 is_a: ZFA:0000658 ! epibranchial bone relationship: develops_from ZFA:0001529 ! epibranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001248 @@ -14662,9 +14665,9 @@ synonym: "rostral pancreas" RELATED [ZFIN:ZDB-PUB-050623-3.] xref: TAO:0001249 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001369 ! anterior pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000140 ! pancreas -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001250 @@ -14675,9 +14678,9 @@ synonym: "infrapharyngobranchial 2" EXACT [] xref: TAO:0001250 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001536 ! pharyngobranchial 2 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001251 @@ -14688,9 +14691,9 @@ synonym: "infrapharyngobranchial 4 cartilage" EXACT [] synonym: "infrapharyngobranchials" EXACT [] xref: TAO:0001251 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001252 @@ -14701,9 +14704,9 @@ synonym: "pharyngobranchial 3 bones" EXACT PLURAL [] xref: TAO:0001252 is_a: ZFA:0000527 ! pharyngobranchial bone relationship: develops_from ZFA:0001534 ! pharyngobranchial 3 cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001253 @@ -14726,9 +14729,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the lateral part of the floor plate." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001256 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001257 @@ -14737,9 +14740,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the medial part of the floor plate and is located adjacent to the notochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001257 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001258 @@ -14749,10 +14752,10 @@ def: "Floor plate that is part of the rhombomeres." [GOC:mh, ORCiD:0000-0001-911 synonym: "floor plate hindbrain region" RELATED [] xref: TAO:0001258 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001259 @@ -14762,10 +14765,10 @@ synonym: "forebrain vesicle" EXACT [] synonym: "prosencephalic ventricle" EXACT [] xref: TAO:0001259 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000109 ! forebrain relationship: part_of ZFA:0001261 ! ventricular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001260 @@ -14778,9 +14781,9 @@ synonym: "tail pancreas" RELATED [ZFIN:ZDB-PUB-080922-7] xref: TAO:0001260 is_a: ZFA:0001489 ! compound organ component relationship: develops_from ZFA:0001370 ! posterior pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000140 ! pancreas -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001261 @@ -14788,9 +14791,9 @@ name: ventricular system namespace: zebrafish_anatomy xref: TAO:0001261 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001262 @@ -14801,9 +14804,9 @@ synonym: "gonadal primordium" EXACT [] synonym: "undifferentiated gonad" EXACT [] xref: TAO:0001262 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001263 @@ -14814,8 +14817,8 @@ synonym: "ovarian follicle stage 1" EXACT [] synonym: "previtellogenic ovarian follicle" EXACT [] xref: TAO:0001263 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001264 @@ -14826,8 +14829,8 @@ synonym: "mature ovarian follicle" EXACT [] synonym: "ovarian follicle stage 4" EXACT [] xref: TAO:0001264 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001265 @@ -14838,8 +14841,8 @@ synonym: "ovarian follicle stage 2" EXACT [] synonym: "ovarian follicles stage II" EXACT PLURAL [] xref: TAO:0001265 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001266 @@ -14850,8 +14853,8 @@ synonym: "ovarian follicle stage 3" EXACT [] synonym: "ovarian follicles stage III" EXACT PLURAL [] xref: TAO:0001266 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001267 @@ -14861,9 +14864,9 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th synonym: "head vasculature" EXACT [] xref: TAO:0001267 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001268 @@ -14875,9 +14878,9 @@ synonym: "efferent tubule" EXACT [] synonym: "sperm ducts" EXACT PLURAL [] xref: TAO:0001268 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001269 @@ -14887,8 +14890,8 @@ def: "Fin undergoing the process of regeneration." [GOC:cvs, ORCiD:0000-0002-224 synonym: "regenerating fins" EXACT PLURAL [] xref: TAO:0001269 is_a: ZFA:0000108 ! fin -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001270 @@ -14898,9 +14901,9 @@ def: "A regenerating tissue composed of a proliferative mass of undifferentiated synonym: "regeneration blastema" EXACT [ZFIN:ZDB-PUB-061108-12] xref: TAO:0001270 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001269 ! regenerating fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001271 @@ -14909,9 +14912,9 @@ namespace: zebrafish_anatomy synonym: "posterior pituitary" EXACT [] xref: TAO:0001271 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001272 @@ -14924,11 +14927,11 @@ synonym: "upper jaw" EXACT [] synonym: "upper pharyngeal jaw" EXACT [] xref: TAO:0001272 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000444 ! suspensorium relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001273 @@ -14940,10 +14943,10 @@ synonym: "mandible" EXACT [] synonym: "mandibular series" EXACT [] xref: TAO:0001273 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000590 ! oral region relationship: part_of ZFA:0001227 ! mandibular arch skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001274 @@ -14954,10 +14957,10 @@ synonym: "coronoid" RELATED [] synonym: "sesamoid articular" EXACT [] xref: TAO:0001274 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001275 @@ -14973,10 +14976,10 @@ namespace: zebrafish_anatomy synonym: "hyoid bars" EXACT [] xref: TAO:0001276 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium relationship: part_of ZFA:0001611 ! pharyngeal arch 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001277 @@ -14987,9 +14990,9 @@ synonym: "camera arerea weberiana" EXACT [] xref: TAO:0001277 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005337 ! anterior swim bladder bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001278 @@ -14998,9 +15001,9 @@ namespace: zebrafish_anatomy def: "The posterior compartment of the swim bladder plays a key role in buoyancy control. It is connected to the anterior chamber via the ductus communicans. This chamber corresponds to the swim bladder found in larval fish." [ZFIN:ZDB-PUB-060306-11] xref: TAO:0001278 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001279 @@ -15010,8 +15013,8 @@ def: "Branchiostegal ray that is the most anterior ray which ossifies last (5.5 synonym: "branchiostegal rays 1" EXACT PLURAL [] xref: TAO:0001279 is_a: ZFA:0000476 ! branchiostegal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001280 @@ -15021,8 +15024,8 @@ def: "Branchiostegal ray that is the most posterior ray which ossifies first (3. synonym: "branchiostegal rays 3" EXACT PLURAL [] xref: TAO:0001280 is_a: ZFA:0000476 ! branchiostegal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001281 @@ -15032,8 +15035,8 @@ def: "Branchiostegal ray 2 is between rays 1 and 3 and ossifies second." [GOC:cv synonym: "branchiostegal rays 2" EXACT PLURAL [] xref: TAO:0001281 is_a: ZFA:0000476 ! branchiostegal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001282 @@ -15046,9 +15049,9 @@ synonym: "anterior pituitary" EXACT [] xref: TAO:0001282 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001198 ! adenohypophyseal placode -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001283 @@ -15058,9 +15061,9 @@ def: "Anatomical space that is located in the center of the iris and allows ligh synonym: "pupils" EXACT PLURAL [] xref: TAO:0001283 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001284 @@ -15071,9 +15074,9 @@ synonym: "choroid fissure" RELATED [] synonym: "optic fissures" EXACT PLURAL [] xref: TAO:0001284 is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001202 ! optic cup -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001285 @@ -15086,10 +15089,10 @@ synonym: "segmental vessel" EXACT [] xref: TAO:0001285 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0000014 ! dorsal aorta -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001286 @@ -15098,8 +15101,8 @@ namespace: zebrafish_anatomy def: "Post-vent vasculature which forms an interconnecting network of venous tubes. The caudal vein plexus forms via a very active period of angiogenic sprouting, beginning at 25 hpf when venous endothelial cells of the posterior cardinal vein sprout and migrate ventrally, then fuse with neighboring tip cells. This process reiterates during a five-hour window, forming a primordial plexus by 30 hpf. By two days of development, the primitive caudal vein plexus has matured into a complex, well-perfused, venous vascular network. Starting at 4 dpf the caudal vein plexus starts to remodel and simplify." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010205-5, ZFIN:ZDB-PUB-111011-36] xref: TAO:0001286 is_a: ZFA:0005932 ! developmental vascular plexus -relationship: end ZFS:0000039 ! Larval:Days 7-13 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000039 ! larval:days 7-13 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001287 @@ -15110,9 +15113,9 @@ synonym: "mesonephric tubule" EXACT [] synonym: "renal tubules" EXACT PLURAL [] xref: TAO:0001287 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005282 ! nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001288 @@ -15123,9 +15126,9 @@ synonym: "glomerular capillary tuft" RELATED [] synonym: "renal glomeruli" EXACT PLURAL [] xref: TAO:0001288 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001289 @@ -15139,9 +15142,9 @@ synonym: "retinal ciliary marginal zone" EXACT [] synonym: "retinal proliferative zone" RELATED [] xref: TAO:0001289 is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001290 @@ -15151,10 +15154,10 @@ def: "Anterior part of the embryonic alimentary canal formed as an invagination synonym: "oral ectoderm" RELATED [ZFIN:ZDB-PUB-100726-23] xref: TAO:0001290 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000112 ! gut relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001291 @@ -15167,8 +15170,8 @@ xref: TAO:0001291 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0000762 ! facio-acoustic neural crest relationship: develops_from ZFA:0001295 ! facial placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001292 @@ -15178,9 +15181,9 @@ def: "The stalk emanates from the diencephalic roof at a left-of-medial position synonym: "pineal stalk" EXACT [] xref: TAO:0001292 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001293 @@ -15190,9 +15193,9 @@ synonym: "posterior kidneys" EXACT PLURAL [] xref: TAO:0001293 is_a: ZFA:0000496 ! compound organ relationship: develops_from ZFA:0000151 ! pronephros -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001294 @@ -15203,9 +15206,9 @@ synonym: "epibranchial placodes" EXACT PLURAL [] xref: TAO:0001294 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007061 ! epibranchial field -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001295 @@ -15215,8 +15218,8 @@ def: "Epibranchial placode that gives rise to the facial ganglia." [GOC:mh, ORCi synonym: "geniculate placode" EXACT [] xref: TAO:0001295 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001296 @@ -15226,8 +15229,8 @@ def: "Epibranchial placode that gives rise to the glossopharyngeal ganglia. Asso synonym: "petrosal placode" EXACT [] xref: TAO:0001296 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001297 @@ -15236,8 +15239,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 1." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-31] xref: TAO:0001297 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001298 @@ -15246,8 +15249,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 2." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-31] xref: TAO:0001298 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001299 @@ -15256,8 +15259,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 3." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-3] xref: TAO:0001299 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001300 @@ -15266,8 +15269,8 @@ namespace: zebrafish_anatomy def: "Epibranchial placode that gives rise to vagal ganglion 4." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-070122-31] xref: TAO:0001300 is_a: ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001301 @@ -15279,8 +15282,8 @@ xref: TAO:0001301 is_a: ZFA:0001555 ! epibranchial ganglion relationship: develops_from ZFA:0001296 ! glossopharyngeal placode relationship: develops_from ZFA:0007066 ! glossopharyngeal neural crest -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001302 @@ -15291,8 +15294,8 @@ synonym: "nodose ganglion 1" EXACT [] xref: TAO:0001302 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001297 ! vagal placode 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001303 @@ -15303,8 +15306,8 @@ synonym: "nodose ganglion 2" EXACT [] xref: TAO:0001303 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001298 ! vagal placode 2 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001304 @@ -15315,8 +15318,8 @@ synonym: "nodose ganglion 3" EXACT [] xref: TAO:0001304 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001299 ! vagal placode 3 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001305 @@ -15327,8 +15330,8 @@ synonym: "nodose ganglion 4" EXACT [] xref: TAO:0001305 is_a: ZFA:0007067 ! vagal ganglion relationship: develops_from ZFA:0001300 ! vagal placode 4 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001306 @@ -15338,9 +15341,9 @@ def: "One of a series of paired bony or cartilaginous arches that develop along synonym: "pharyngeal arches" EXACT PLURAL [] xref: TAO:0001306 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001307 @@ -15349,9 +15352,9 @@ namespace: zebrafish_anatomy def: "Muscle system of the pharyngeal region." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001307 is_a: ZFA:0000328 ! cephalic musculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001306 ! pharyngeal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001308 @@ -15362,9 +15365,9 @@ synonym: "body part" EXACT [] xref: CARO:0000032 xref: TAO:0001308 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0001309 @@ -15375,9 +15378,9 @@ synonym: "neurogenic placodes" EXACT PLURAL [] xref: TAO:0001309 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001310 @@ -15388,8 +15391,8 @@ synonym: "dorsolateral placodes" EXACT PLURAL [] xref: TAO:0001310 is_a: ZFA:0001309 ! neurogenic placode relationship: develops_from ZFA:0007060 ! dorsolateral field -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001311 @@ -15398,10 +15401,10 @@ namespace: zebrafish_anatomy synonym: "roof plate hindbrain" RELATED [] xref: TAO:0001311 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001064 ! rhombomere relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001312 @@ -15411,8 +15414,8 @@ synonym: "anterodorsal lateral line ganglion" EXACT [] xref: TAO:0001312 is_a: ZFA:0001391 ! anterior lateral line ganglion relationship: develops_from ZFA:0001316 ! anterior lateral line placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001313 @@ -15422,8 +15425,8 @@ synonym: "anteroventral lateral line ganglion" EXACT [] xref: TAO:0001313 is_a: ZFA:0001391 ! anterior lateral line ganglion relationship: develops_from ZFA:0001316 ! anterior lateral line placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001314 @@ -15435,8 +15438,8 @@ synonym: "posterior lateral line ganglia" EXACT PLURAL [] xref: TAO:0001314 is_a: ZFA:0000120 ! lateral line ganglion relationship: develops_from ZFA:0001156 ! posterior lateral line placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001315 @@ -15448,9 +15451,9 @@ synonym: "AVC" EXACT [] xref: TAO:0001315 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001723 ! presumptive atrioventricular canal -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001316 @@ -15460,9 +15463,9 @@ def: "Dorsolateral placode that gives rise to the anterior lateral line." [GOC:y synonym: "anterior lateral line placodes" EXACT PLURAL [] xref: TAO:0001316 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001317 @@ -15473,9 +15476,9 @@ comment: ZDB-PUB-080309-14 says these don't exist but looked at 55 hpf rather th synonym: "endocardial cushions" EXACT PLURAL [] xref: TAO:0001317 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001320 ! endocardium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001318 @@ -15484,9 +15487,9 @@ namespace: zebrafish_anatomy def: "The extracellular matrix between the myocardium and the endocardium. The cardiac jelly plays a central role in the septation of the heart and comprises most of the thickness of the heart wall at early stages, but disappears as the heart differentiates." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001318 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0001319 @@ -15496,9 +15499,9 @@ synonym: "cardiac muscle" RELATED [] synonym: "heart muscle " RELATED [] xref: TAO:0001319 is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001320 @@ -15508,9 +15511,9 @@ def: "Layer that lines the lumen of the heart." [GOC:cvs, ORCiD:0000-0002-2244-7 xref: TAO:0001320 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0001724 ! presumptive endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001321 @@ -15521,10 +15524,10 @@ synonym: "trabecula" EXACT [] synonym: "trabecular cartilage" EXACT [] xref: TAO:0001321 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001322 @@ -15534,8 +15537,8 @@ def: "A tract originating in the epiphysis and fasciculating with the tract of t synonym: "DVDT" EXACT [] xref: TAO:0001322 is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001323 @@ -15545,9 +15548,9 @@ def: "The terminal region of the mid intestine is comprised of specialized enter xref: TAO:0001323 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001324 @@ -15555,12 +15558,12 @@ name: enteric musculature namespace: zebrafish_anatomy def: "Musculature of the gut." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] synonym: "gut musculature" EXACT [] -synonym: "tunica muscularis" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] +synonym: "tunica muscularis" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0001324 is_a: ZFA:0000548 ! musculature system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001325 @@ -15571,9 +15574,9 @@ synonym: "neural prezygapophyses" EXACT PLURAL [] synonym: "neural prezygopophyses" EXACT [] xref: TAO:0001325 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001326 @@ -15582,9 +15585,9 @@ namespace: zebrafish_anatomy def: "Epithelium which borders the anterior and equitorial region of the lens. Lens growth in zebrafish occurs via the differentiation of additional fibre cells from lens epithelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070504-24, ZFIN:ZDB-PUB-100202-20] xref: TAO:0001326 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001327 @@ -15593,8 +15596,8 @@ namespace: zebrafish_anatomy def: "Trunk musculature that is located in ventral wall of abdomen." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001327 is_a: ZFA:0000473 ! trunk musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001328 @@ -15605,9 +15608,9 @@ synonym: "neural segment" EXACT [] synonym: "neuromeres" EXACT PLURAL [] xref: TAO:0001328 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001329 @@ -15617,9 +15620,9 @@ def: "The layer within the retina where the bipolar cells synapse with the dendr synonym: "inner plexiform layer" EXACT [] xref: TAO:0001329 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001330 @@ -15629,9 +15632,9 @@ def: "The layer within the retina where the bipolar cells synapse with the photo synonym: "retinal outer plexiform layers" EXACT PLURAL [] xref: TAO:0001330 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001331 @@ -15642,9 +15645,9 @@ synonym: "external limiting membrane" EXACT [] synonym: "outer limiting membranes" EXACT PLURAL [] xref: TAO:0001331 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001332 @@ -15655,9 +15658,9 @@ synonym: "spinal neuromeres" EXACT PLURAL [] xref: TAO:0001332 is_a: ZFA:0001328 ! neuromere is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001333 @@ -15673,8 +15676,8 @@ def: "Presumptive structure fated to become enteric nervous system. Develops fr xref: TAO:0001334 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0000818 ! vagal neural crest -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001335 @@ -15684,9 +15687,9 @@ def: "Supradorsals are small paired nodules of cartilage positioned at the dista synonym: "supradorsals" EXACT PLURAL [] xref: TAO:0001335 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001336 @@ -15696,9 +15699,9 @@ def: "Neural spines are extensions of neural arches dorsal to the neural canal i synonym: "neural spines" EXACT PLURAL [] xref: TAO:0001336 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001066 ! neural arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001338 @@ -15707,10 +15710,10 @@ namespace: zebrafish_anatomy def: "Folded tube that has parts intestinal bulb, mid intestine and posterior intestine. The intestine is where digestion and nutrient absorption occurs." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-050120-6] xref: TAO:0001338 is_a: ZFA:0001490 ! cavitated compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001339 @@ -15720,8 +15723,8 @@ def: "Telencephalic nucleus from which the axons of the anterior commissure orig synonym: "ntAC" EXACT [] xref: TAO:0001339 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001340 @@ -15731,8 +15734,8 @@ def: "The nucleus containing the cell bodies of neurons whose axons form the pos synonym: "ntPOC" EXACT [] xref: TAO:0001340 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001341 @@ -15743,9 +15746,9 @@ synonym: "IZ" EXACT [] xref: TAO:0001341 is_a: ZFA:0001478 ! anatomical cluster relationship: develops_from ZFA:0001342 ! presumptive intervening zone -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001342 @@ -15754,9 +15757,9 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the intervening zone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001342 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001343 @@ -15765,9 +15768,9 @@ namespace: zebrafish_anatomy def: "Boundary between the telencephalon and diencephalon." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001343 is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001344 @@ -15777,9 +15780,9 @@ def: "The border between the dorsal and ventral thalamus." [GOC:mh, ORCiD:0000-0 synonym: "zli" EXACT [] xref: TAO:0001344 is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001215 ! thalamus -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001345 @@ -15789,9 +15792,9 @@ def: "An bilobed multi-tissue structure lateral to the notochord composed of an xref: TAO:0001345 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001346 ! interrenal primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000669 ! head kidney -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001346 @@ -15801,9 +15804,9 @@ def: "Multi-tissue structure located in the kidney that develops into the interr xref: TAO:0001346 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001206 ! intermediate mesoderm -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001347 @@ -15814,9 +15817,9 @@ synonym: "SFGS" RELATED [] synonym: "strata fibrosum et griseum superficiales" EXACT PLURAL [] xref: TAO:0001347 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001348 @@ -15827,9 +15830,9 @@ synonym: "strata marginale" EXACT PLURAL [] synonym: "stratum fibrosum marginale" EXACT [ZFIN:ZDB-PUB-180207-5] xref: TAO:0001348 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001349 @@ -15839,9 +15842,9 @@ def: "Portion of tissue that is the most superficial layer of the tectal neuropi synonym: "strata opticum" EXACT PLURAL [] xref: TAO:0001349 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001350 @@ -15849,9 +15852,9 @@ name: stratum griseum centrale namespace: zebrafish_anatomy xref: TAO:0001350 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001351 @@ -15861,9 +15864,9 @@ def: "Has hypothalamic inputs." [ZFIN:ZDB-PUB-180207-5] synonym: "strata album centrales" EXACT PLURAL [] xref: TAO:0001351 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005907 ! tectal neuropile -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001355 @@ -15875,9 +15878,9 @@ synonym: "meninx primitiva" EXACT [] xref: TAO:0001355 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000045 ! neural crest -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001356 @@ -15887,8 +15890,8 @@ def: "The terminal nerve, located anterior to cranial nerve I, is comprised of a synonym: "nervus terminalis" EXACT [] xref: TAO:0001356 is_a: ZFA:0000641 ! cranial nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001357 @@ -15897,9 +15900,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is ventrolateral to the roof plate and part of the midbrain." [ISBN:0444517383, ZFIN:ZDB-PUB-961014-576] xref: TAO:0001357 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007039 ! midbrain neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001358 @@ -15908,10 +15911,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the diencephalic region." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001358 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000101 ! diencephalon relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001359 @@ -15919,9 +15922,9 @@ name: pineal complex namespace: zebrafish_anatomy xref: TAO:0001359 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000509 ! epithalamus -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001360 @@ -15930,9 +15933,9 @@ namespace: zebrafish_anatomy def: "An unpaired left-sided accessory organ which plays a role in establishing lateral brain left right asymmetry." [ZFIN:ZDB-PUB-030206-1] xref: TAO:0001360 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001359 ! pineal complex -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001361 @@ -15942,8 +15945,8 @@ def: "Basiventrals are bilaterally paired cartilages lateral to the notochord wh synonym: "arcualia" RELATED [] xref: TAO:0001361 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001362 @@ -15956,9 +15959,9 @@ synonym: "transverse process" EXACT [] xref: TAO:0001362 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001361 ! basiventral -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001363 @@ -15969,9 +15972,9 @@ def: "The neural complex is the collective term for the ossified supraneurals (S synonym: "Weberian supraneural" EXACT [] xref: TAO:0001363 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001364 @@ -15981,9 +15984,9 @@ def: "Hemal spines are extensions of hemal arches in the ventral skeletogenous s synonym: "haemal spine" EXACT [] xref: TAO:0001364 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000519 ! hemal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001365 @@ -15993,9 +15996,9 @@ synonym: "motor nucleus V" EXACT [] synonym: "nV" EXACT [] xref: TAO:0001365 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001366 @@ -16005,9 +16008,9 @@ def: "Tract that extends from the postoptic commissure through a curved trajecto synonym: "TPOC" EXACT [] xref: TAO:0001366 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000059 ! postoptic commissure -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001367 @@ -16018,9 +16021,9 @@ synonym: "diencephalic-mesencephalic boundary" EXACT [] xref: TAO:0001367 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007040 ! forebrain midbrain boundary neural tube -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001368 @@ -16029,10 +16032,10 @@ namespace: zebrafish_anatomy def: "Embryonic structure that gives rise to the forebrain midbrain boundary." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001368 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000146 ! presumptive brain relationship: part_of ZFA:0007014 ! anterior presumptive neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001369 @@ -16046,8 +16049,8 @@ synonym: "ventral pancreatic anlage" EXACT [] xref: TAO:0001369 is_a: ZFA:0001390 ! pancreatic bud relationship: develops_from ZFA:0005738 ! intestinal bulb primordium -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0001370 @@ -16060,8 +16063,8 @@ synonym: "dorsal pancreatic anlage" EXACT [] synonym: "dorsal posterior bud" RELATED [ZFIN:ZDB-PUB-030902-16] xref: TAO:0001370 is_a: ZFA:0001390 ! pancreatic bud -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001371 @@ -16070,10 +16073,10 @@ namespace: zebrafish_anatomy def: "System responsible for the production and movement of pancreatic hormones and enzymes." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001371 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001372 @@ -16083,9 +16086,9 @@ def: "Duct that collects and carries secretions of the exocrine pancreas." [GOC: xref: TAO:0001372 is_a: ZFA:0005162 ! digestive system duct relationship: develops_from ZFA:0001369 ! anterior pancreatic bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0001373 @@ -16097,9 +16100,9 @@ synonym: "migratory slow muscle precursor cells" EXACT PLURAL [] xref: TAO:0001373 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000003 ! adaxial cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001374 @@ -16108,10 +16111,10 @@ namespace: zebrafish_anatomy def: "Myocardium of the heart atrium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001374 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001375 @@ -16122,10 +16125,10 @@ synonym: "bulboventricular valve" EXACT [] xref: TAO:0001375 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001376 @@ -16136,8 +16139,8 @@ def: "Presumptive structure at the animal poll of the blastula that will develop synonym: "presumptive epidermis" EXACT [] xref: TAO:0001376 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0001377 @@ -16146,8 +16149,8 @@ namespace: zebrafish_anatomy def: "Presumptive structure fated to become mesoderm. Determined by fate mapping." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001377 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000021 ! gastrula:90%-epiboly +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0001378 @@ -16157,9 +16160,9 @@ def: "Region of the hypoblast that is located along the rostral-caudal axis of t xref: TAO:0001378 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000071 ! shield -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000117 ! hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0001379 @@ -16167,9 +16170,9 @@ name: pharyngeal ectoderm namespace: zebrafish_anatomy xref: TAO:0001379 is_a: ZFA:0000016 ! ectoderm -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001381 @@ -16180,9 +16183,9 @@ synonym: "hypohyals" EXACT PLURAL [] xref: TAO:0001381 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001400 ! ceratohyal cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001382 @@ -16192,9 +16195,9 @@ def: "Epibranchials 1-3 in adults are compound elements formed by the fusion of synonym: "epibranchial uncinate processes" EXACT PLURAL [] xref: TAO:0001382 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000658 ! epibranchial bone -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001383 @@ -16204,8 +16207,8 @@ def: "Surface structure that develops into a paired fin." [GOC:mh, ORCiD:0000-00 synonym: "fin buds" EXACT PLURAL [] xref: TAO:0001383 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000042 ! juvenile:days 30-44 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001384 @@ -16216,8 +16219,8 @@ synonym: "pelvic fin buds" EXACT PLURAL [] xref: TAO:0001384 is_a: ZFA:0001383 ! fin bud relationship: develops_from ZFA:0001454 ! pelvic fin field -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000042 ! juvenile:days 30-44 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001385 @@ -16227,9 +16230,9 @@ def: "Apical ectodermal ridge that is part of the pelvic fin bud." [GOC:cvs, ORC synonym: "apical ectodermal ridge pelvic fin buds" EXACT PLURAL [] xref: TAO:0001385 is_a: ZFA:0001702 ! apical ectodermal ridge -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001386 @@ -16239,9 +16242,9 @@ def: "Mesoderm part of pelvic fin bud." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "mesoderm pelvic fin buds" EXACT PLURAL [] xref: TAO:0001386 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001384 ! pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001387 @@ -16250,9 +16253,9 @@ namespace: zebrafish_anatomy def: "Skeleton that supports the pelvic fin. The skeleton consists of consists of supporting endochondral radials and dermal fin rays or lepidotrichia." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001387 is_a: ZFA:0000027 ! paired fin skeleton -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001388 @@ -16261,9 +16264,9 @@ namespace: zebrafish_anatomy synonym: "epithelial mesenchymal boundarys" EXACT PLURAL [] xref: TAO:0001388 is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001269 ! regenerating fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001389 @@ -16275,9 +16278,9 @@ synonym: "wound epidermis" EXACT [] synonym: "wound epithelium" EXACT [] xref: TAO:0001389 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001269 ! regenerating fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001390 @@ -16288,9 +16291,9 @@ synonym: "pancreatic buds" EXACT PLURAL [] xref: TAO:0001390 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0000254 ! pancreas primordium -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001391 @@ -16300,8 +16303,8 @@ def: "The anterior lateral line ganglia develops from cranial ectodermal placode synonym: "anterior lateral line ganglia" EXACT PLURAL [] xref: TAO:0001391 is_a: ZFA:0000120 ! lateral line ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001392 @@ -16312,9 +16315,9 @@ synonym: "basipophysis 1" EXACT [] synonym: "lateral process 1" EXACT [] xref: TAO:0001392 is_a: ZFA:0001362 ! parapophysis -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001167 ! vertebra 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001393 @@ -16325,9 +16328,9 @@ synonym: "basipophysis" EXACT [] synonym: "lateral process 2" EXACT [] xref: TAO:0001393 is_a: ZFA:0001362 ! parapophysis -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001168 ! vertebra 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001394 @@ -16336,9 +16339,9 @@ namespace: zebrafish_anatomy def: "Neural arch 3 is expanded and fused to supraneural 3 as part of a neural complex roofing and protecting the neural canal." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001394 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001169 ! vertebra 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001395 @@ -16347,9 +16350,9 @@ namespace: zebrafish_anatomy def: "Neural arch 4 is expanded and fused to supraneural 3 as part of the neural complex. A reduced neural spine projects from the posterior margin of the neural complex." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001395 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001170 ! vertebra 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001396 @@ -16358,9 +16361,9 @@ namespace: zebrafish_anatomy def: "The parapophysis + rib, fused to the centrum, extends laterally then angles anteroventrally. A thin plate, the os suspensorium fuses to its median surface." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001396 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001170 ! vertebra 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001397 @@ -16370,8 +16373,8 @@ def: "Posterior to the Weberian apparatus, otophysan supraneurals form as median synonym: "post-Weberian supraneurals" EXACT PLURAL [] xref: TAO:0001397 is_a: ZFA:0000442 ! supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001399 @@ -16383,10 +16386,10 @@ synonym: "pterygoquadrate" EXACT [] synonym: "quadrate cartilage" EXACT [] xref: TAO:0001399 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0007117 ! Meckel's cartilage-palatoquadrate cartilage joint relationship: part_of ZFA:0001272 ! palatoquadrate arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001400 @@ -16395,10 +16398,10 @@ namespace: zebrafish_anatomy def: "Pharyngeal arch cartilage that is bilaterally paired and the largest cartilaginous component of the ventral hyoid arch." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001400 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005885 ! operculohyoid ligament relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001401 @@ -16407,10 +16410,10 @@ namespace: zebrafish_anatomy synonym: "dorsal visceral arch 2" EXACT [] xref: TAO:0001401 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000444 ! suspensorium relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001402 @@ -16419,9 +16422,9 @@ namespace: zebrafish_anatomy synonym: "ventral visceral arch 2" EXACT [] xref: TAO:0001402 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001276 ! pharyngeal arch 2 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001403 @@ -16431,10 +16434,10 @@ def: "Dermal bone that first appears as paired ossifications in the membrane (de synonym: "supra-ethmoid" RELATED [] xref: TAO:0001403 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001404 @@ -16446,10 +16449,10 @@ synonym: "preethmoid bones" EXACT PLURAL [] xref: TAO:0001404 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001405 ! ethmoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001405 @@ -16459,10 +16462,10 @@ def: "Bilaterally paired neurocranium cartilage which is initially plate-like an synonym: "ethmoid plate" EXACT [] xref: TAO:0001405 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000042 ! juvenile:days 30-44 relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001406 @@ -16472,11 +16475,11 @@ def: "Small median unpaired dermal sesamoid bone in the premaxillary-ethmoid lig xref: TAO:0001406 is_a: ZFA:0001590 ! dermal bone relationship: develops_from ZFA:0000585 ! kinethmoid cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000351 ! olfactory region relationship: part_of ZFA:0000863 ! dermatocranium relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001407 @@ -16485,9 +16488,9 @@ namespace: zebrafish_anatomy def: "Plate like dermal bone, variable in size, though usually one of the smallest in the series. Bears 2-3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001407 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001408 @@ -16496,9 +16499,9 @@ namespace: zebrafish_anatomy def: "Plate like dermal bone, variable in size, but usually largest in the series. Usually fused with IO4 (eg. Opsariichthys, Nelson (1969)). Usually bears 3 neuromast pores enclosed within the infraorbital canal (Nelson, 1969)." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001408 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001409 @@ -16507,9 +16510,9 @@ namespace: zebrafish_anatomy def: "Plate like dermal bone. Usually fused with infraorbital 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001409 is_a: ZFA:0000376 ! infraorbital -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001649 ! infraorbital series -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001410 @@ -16518,9 +16521,9 @@ namespace: zebrafish_anatomy def: "Anatomical cluster that is a anteriolateral part of the cranium and structurally supports the eye." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001410 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001411 @@ -16532,10 +16535,10 @@ synonym: "sclerotic bones" EXACT PLURAL [] xref: TAO:0001411 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001509 ! sclerotic cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001410 ! orbital region relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001412 @@ -16547,13 +16550,13 @@ synonym: "epioccipital" EXACT [] xref: TAO:0001412 is_a: ZFA:0001591 ! endochondral bone relationship: develops_from ZFA:0001500 ! auditory capsule -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005889 ! epiotic-posttemporal joint relationship: overlaps ZFA:0005891 ! epiotic-parietal joint relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001424 ! chondrocranium relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0001414 @@ -16563,9 +16566,9 @@ def: "Anatomical cluster that is located in the posterior region of the cranium synonym: "basicranial region" EXACT [] xref: TAO:0001414 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001415 @@ -16576,8 +16579,8 @@ synonym: "pelvic radials 2" EXACT PLURAL [] xref: TAO:0001415 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001541 ! pelvic radial 2 cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001416 @@ -16588,8 +16591,8 @@ synonym: "pelvic radials 3" EXACT PLURAL [] xref: TAO:0001416 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001540 ! pelvic radial 3 cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001417 @@ -16600,8 +16603,8 @@ synonym: "pelvic radials 1" EXACT PLURAL [] xref: TAO:0001417 is_a: ZFA:0000508 ! pelvic radial relationship: develops_from ZFA:0001542 ! pelvic radial 1 cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001418 @@ -16612,9 +16615,9 @@ synonym: "dorsal fin lepidotrichia" EXACT PLURAL [] synonym: "dorsal fin ray" EXACT [] xref: TAO:0001418 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001124 ! dorsal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001419 @@ -16624,9 +16627,9 @@ def: "A range of seven to nine rod-like internal median skeletal support structu synonym: "dorsal fin support" EXACT [] xref: TAO:0001419 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001124 ! dorsal fin skeleton -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001420 @@ -16636,9 +16639,9 @@ def: "A range of twelve to fourteen rod-like internal median skeletal support st synonym: "anal fin radial" RELATED [] xref: TAO:0001420 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000167 ! anal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001421 @@ -16649,9 +16652,9 @@ synonym: "anal fin lepidotrichia" EXACT PLURAL [] synonym: "anal fin ray" EXACT [] xref: TAO:0001421 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000167 ! anal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001422 @@ -16661,9 +16664,9 @@ def: "Bilaterally paired large cartilage that articulates with the chondrocraniu synonym: "hyomandibular cartilage" EXACT [] xref: TAO:0001422 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001401 ! dorsal hyoid arch -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001423 @@ -16673,11 +16676,11 @@ def: "Rod-shaped paired cartilages on either side of the notochord. They unite, synonym: "parachordal cartilages" EXACT PLURAL [] xref: TAO:0001423 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000189 ! otic region relationship: part_of ZFA:0001414 ! occipital region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001424 @@ -16689,9 +16692,9 @@ synonym: "chondocranium" EXACT [] synonym: "neurocranium" RELATED [] xref: TAO:0001424 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001425 @@ -16700,10 +16703,10 @@ namespace: zebrafish_anatomy synonym: "basal plate cartilages" EXACT PLURAL [] xref: TAO:0001425 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001423 ! parachordal cartilage relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001426 @@ -16714,8 +16717,8 @@ synonym: "excurrent nostril" EXACT [ZFIN:ZDB-PUB-961014-399] synonym: "posterior nares" EXACT PLURAL [] xref: TAO:0001426 is_a: ZFA:0000550 ! naris -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001427 @@ -16726,8 +16729,8 @@ synonym: "anterior nares" EXACT PLURAL [] synonym: "incurrent nostril" EXACT [ZFIN:ZDB-PUB-961014-399] xref: TAO:0001427 is_a: ZFA:0000550 ! naris -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001428 @@ -16738,9 +16741,9 @@ comment: Olfactory epithelium may be part of olfactory rosette. \nThe epithelium synonym: "olfactory rosettes" EXACT PLURAL [] xref: TAO:0001428 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000047 ! peripheral olfactory organ -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001429 @@ -16750,9 +16753,9 @@ def: "Ventral hindbrain nuclei just caudal to the interpeduncular nucleus." [ZFI synonym: "median raphe nucleus" EXACT [ZFIN:ZDB-PUB-100202-7] xref: TAO:0001429 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000241 ! midline column -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001430 @@ -16762,8 +16765,8 @@ def: "A duct connecting the esophagus to the posterior chamber of the swim bladd xref: TAO:0001430 is_a: ZFA:0005171 ! duct relationship: continuous_with ZFA:0000204 ! esophagus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001431 @@ -16771,9 +16774,9 @@ name: primitive olfactory epithelium namespace: zebrafish_anatomy xref: TAO:0001431 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000048 ! olfactory placode -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001432 @@ -16783,8 +16786,8 @@ def: "Sclerotic bone that is located anterior to the eye." [GOC:mh, ORCiD:0000-0 synonym: "anterior sclerotic bones" EXACT PLURAL [] xref: TAO:0001432 is_a: ZFA:0001411 ! sclerotic bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001433 @@ -16794,8 +16797,8 @@ def: "Sclerotic bone that is located posterior to the eye." [GOC:mh, ORCiD:0000- synonym: "posterior sclerotic bones" EXACT PLURAL [] xref: TAO:0001433 is_a: ZFA:0001411 ! sclerotic bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001434 @@ -16805,10 +16808,10 @@ def: "Floor plate that is part of the neural tube." [GOC:mh, GOC:ymb, ORCiD:0000 xref: TAO:0001434 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000887 ! floor plate neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000022 ! floor plate relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001435 @@ -16817,9 +16820,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue on the side of the lumen of the neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001435 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001436 @@ -16828,10 +16831,10 @@ namespace: zebrafish_anatomy def: "Roof plate that is part of the neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001436 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube relationship: part_of ZFA:0007058 ! roof plate -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0001437 @@ -16840,9 +16843,9 @@ namespace: zebrafish_anatomy def: "The constriction between the anterior and posterior chambers of the swim bladder. There does not appear to be an identifiable sphincter in the ductus, and therefore other musculature may regulate its opening." [ZFIN:ZDB-PUB-060306-11] xref: TAO:0001437 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001438 @@ -16852,9 +16855,9 @@ def: "Anatomical space, part of the trunk that contains the pericardial and pleu synonym: "body cavity" EXACT [] xref: TAO:0001438 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001439 @@ -16865,9 +16868,9 @@ synonym: "anatomical systems" EXACT PLURAL [] xref: CARO:0000011 xref: TAO:0001439 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001440 @@ -16876,9 +16879,9 @@ namespace: zebrafish_anatomy def: "The interface between the dorsal neuroepithelium and the roof plate of the fourth ventricle. The source of a number of migratory neuron populations of the hindbrain." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001440 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001441 @@ -16887,7 +16890,7 @@ namespace: zebrafish_anatomy def: "Posterior portion of the rhombic lip contained within rhombomeres 2-8. Gives rise to several brainstem nuclei and choroid plexus." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001441 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000069 ! rhombomere 6 relationship: part_of ZFA:0000153 ! rhombomere 8 relationship: part_of ZFA:0000822 ! rhombomere 2 @@ -16896,7 +16899,7 @@ relationship: part_of ZFA:0000948 ! rhombomere 3 relationship: part_of ZFA:0000949 ! rhombomere 7 relationship: part_of ZFA:0001032 ! rhombomere 4 relationship: part_of ZFA:0001440 ! rhombic lip -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001442 @@ -16905,10 +16908,10 @@ namespace: zebrafish_anatomy def: "Anterior-most region of dorsal hindbrain within rhombomere 1, adjacent the midbrain-hindbrain boundary." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001442 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0001031 ! rhombomere 1 relationship: part_of ZFA:0001440 ! rhombic lip -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001443 @@ -16917,9 +16920,9 @@ namespace: zebrafish_anatomy def: "A tuft of capillaries that project into the ventricles of the brain and secretes cerebral spinal fluid. The choroid plexus is covered by a cuboidal epithelium which maintains the integrity of the blood-brain barrier." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001443 is_a: ZFA:0000099 ! brain vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001444 @@ -16929,9 +16932,9 @@ def: "Choroid plexus that is part of the third ventricle." [GOC:cvs, ORCiD:0000- synonym: "diencephalic choroid plexus " EXACT [] xref: TAO:0001444 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001445 @@ -16941,9 +16944,9 @@ def: "Choroid plexus that is part of the tectal ventricle." [GOC:cvs, ORCiD:0000 synonym: "choroid plexus tectal ventricles" EXACT PLURAL [] xref: TAO:0001445 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000159 ! tectal ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001446 @@ -16952,9 +16955,9 @@ namespace: zebrafish_anatomy def: "Choroid plexus that is part of the fourth ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001446 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000110 ! fourth ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001447 @@ -16963,9 +16966,9 @@ namespace: zebrafish_anatomy def: "Choroid plexus that is part of the telencephalic ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001447 is_a: ZFA:0001443 ! choroid plexus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000696 ! telencephalic ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001448 @@ -16975,9 +16978,9 @@ def: "Glands that produce calcitonin. In adult fish the glands lie as two group synonym: "ultimobranchial bodies" EXACT PLURAL [] xref: TAO:0001448 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001449 @@ -16988,9 +16991,9 @@ synonym: "mesenchyme pelvic fins" EXACT PLURAL [] xref: TAO:0001449 is_a: ZFA:0000393 ! mesenchyme relationship: develops_from ZFA:0001386 ! mesoderm pelvic fin bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001450 @@ -17001,9 +17004,9 @@ synonym: "apical ectodermal ridge pelvic fins" EXACT PLURAL [] xref: TAO:0001450 is_a: ZFA:0001702 ! apical ectodermal ridge relationship: develops_from ZFA:0001385 ! apical ectodermal ridge pelvic fin bud -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001184 ! pelvic fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001451 @@ -17013,9 +17016,9 @@ def: "A small group of mesodermal cells located at the posterior margin of the d synonym: "ZPA" RELATED [] xref: TAO:0001451 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000789 ! mesoderm pectoral fin bud -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001452 @@ -17025,9 +17028,9 @@ def: "A small group of mesodermal cells located at the posterior margin of the d synonym: "ZPA" RELATED [] xref: TAO:0001452 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001386 ! mesoderm pelvic fin bud -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001453 @@ -17037,9 +17040,9 @@ def: "Embryonic region that develops into the pectoral fin bud." [GOC:mh, ORCiD: synonym: "pectoral fin fields" EXACT PLURAL [] xref: TAO:0001453 is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001454 @@ -17049,9 +17052,9 @@ def: "Portion of tissue in the pelvic region that develops into the pelvic fin b synonym: "pelvic fin fields" EXACT PLURAL [] xref: TAO:0001454 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0005042 ! posterior lateral plate mesoderm -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001455 @@ -17062,9 +17065,9 @@ synonym: "coraco-scapular cartilage" EXACT [] synonym: "scapulo-coracoid cartilage" EXACT [] xref: TAO:0001455 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0000407 ! pectoral girdle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001456 @@ -17074,8 +17077,8 @@ def: "A plate-like chondrogenic condensation within the pectoral fin, which subd synonym: "fin plate cartilage" EXACT [] xref: TAO:0001456 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001457 @@ -17085,9 +17088,9 @@ def: "Cartilage which is part of the axial skeleton." [GOC:mh, ORCiD:0000-0001-9 synonym: "postcranial axial cartilages" EXACT PLURAL [] xref: TAO:0001457 is_a: ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001458 @@ -17097,9 +17100,9 @@ def: "Cartilage which is part of the cranium." [GOC:mh, ORCiD:0000-0001-9114-873 synonym: "cranial cartilages" EXACT PLURAL [] xref: TAO:0001458 is_a: ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001459 @@ -17109,9 +17112,9 @@ def: "Cartilage which is part of the pelvic fin." [GOC:mh, ORCiD:0000-0001-9114- synonym: "pelvic fin cartilages" EXACT PLURAL [] xref: TAO:0001459 is_a: ZFA:0001543 ! paired fin cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001460 @@ -17121,9 +17124,9 @@ synonym: "pharyngeal arch cartilages" EXACT PLURAL [] synonym: "splanchnocranium cartilage" EXACT [] xref: TAO:0001460 is_a: ZFA:0001458 ! cranial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001216 ! splanchnocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001461 @@ -17133,9 +17136,9 @@ def: "Cartilage that is part of the chondrocranium." [GOC:cvs, ORCiD:0000-0002-2 synonym: "neurocranium cartilage" EXACT [] xref: TAO:0001461 is_a: ZFA:0001458 ! cranial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001424 ! chondrocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001462 @@ -17146,9 +17149,9 @@ synonym: "somite border cell" EXACT PLURAL [] synonym: "somite boundary" RELATED [] xref: TAO:0001462 is_a: ZFA:0005594 ! anatomical surface -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000155 ! somite -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0001463 @@ -17158,9 +17161,9 @@ def: "Surface structure composed of an array of melanophores arranged in a strip synonym: "melanophore stripes" EXACT PLURAL [] xref: TAO:0001463 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001464 @@ -17170,9 +17173,9 @@ def: "The layer within the retina where the photoreceptor cell bodies reside." [ synonym: "retinal outer nuclear layers" EXACT PLURAL [] xref: TAO:0001464 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001465 @@ -17182,9 +17185,9 @@ def: "Layer of the retina composed of the inner segments of the photoreceptor ce synonym: "photoreceptor inner segment layers" EXACT PLURAL [] xref: TAO:0001465 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001466 @@ -17194,9 +17197,9 @@ def: "Layer of the retina composed of the outer segments of the photoreceptor ce synonym: "photoreceptor outer segment layers" EXACT PLURAL [] xref: TAO:0001466 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001467 @@ -17204,9 +17207,9 @@ name: pharyngeal mesoderm namespace: zebrafish_anatomy xref: TAO:0001467 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000056 ! pharynx -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001468 @@ -17215,8 +17218,8 @@ namespace: zebrafish_anatomy def: "The anterior lateral line system develops from cranial ectodermal placodes, situated between the eye and the ear, that give rise to both the neuromasts and the anterior lateral line sensory nerves that innervate the neuromasts. The anterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians and are innervated by several lateral line nerves, which project to the hindbrain. The anterior lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001468 is_a: ZFA:0000034 ! lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001469 @@ -17226,9 +17229,9 @@ def: "The lateral line consists of small sensory patches (neuromasts) located su synonym: "lateral lines" EXACT PLURAL [] xref: TAO:0001469 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001470 @@ -17239,9 +17242,9 @@ synonym: "anterior lateral lines" EXACT PLURAL [] xref: TAO:0001470 is_a: ZFA:0001469 ! lateral line relationship: develops_from ZFA:0005117 ! anterior lateral line primordium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0001471 @@ -17250,8 +17253,8 @@ namespace: zebrafish_anatomy def: "The posterior lateral line system develops from cranial ectodermal placodes, situated behind the ear, that give rise to both the neuromasts and the posterior lateral line sensory nerves that innervate the neuromasts. The posterior lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The posterior mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0001471 is_a: ZFA:0000034 ! lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001472 @@ -17261,9 +17264,9 @@ def: "Neuromast that is part of the anterior lateral line. (Also see Anatomical synonym: "neuromast anterior" EXACT [] xref: TAO:0001472 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001470 ! anterior lateral line -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001473 @@ -17274,8 +17277,8 @@ subset: cell_slim synonym: "deep blastomeres" EXACT PLURAL [] xref: TAO:0001473 is_a: ZFA:0000093 ! blastomere -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000007 ! Cleavage:64-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000007 ! cleavage:64-cell [Term] id: ZFA:0001474 @@ -17303,8 +17306,8 @@ def: "Anatomical structure, that consists of similar cells and intercellular mat xref: CARO:0000043 xref: TAO:0001477 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000012 ! Blastula:High +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001478 @@ -17314,8 +17317,8 @@ def: "Anatomical group that has its parts adjacent to one another." [GOC:mh, ORC xref: CARO:0000041 xref: TAO:0001478 is_a: ZFA:0001512 ! anatomical group -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000012 ! Blastula:High +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000012 ! blastula:high [Term] id: ZFA:0001479 @@ -17325,9 +17328,9 @@ def: "Cranial nerves that carry afferent and efferent fibers for the lateral lin synonym: "lateral line nerves" EXACT PLURAL [] xref: TAO:0001479 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001480 @@ -17338,9 +17341,9 @@ synonym: "anterodorsal lateral line nerve" EXACT [] synonym: "dorsal anterior lateral line nerves" EXACT PLURAL [] xref: TAO:0001480 is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000425 ! anterior lateral line nerve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001481 @@ -17351,9 +17354,9 @@ synonym: "anteroventral lateral line nerve" EXACT [] synonym: "ventral anterior lateral line nerves" EXACT PLURAL [] xref: TAO:0001481 is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000425 ! anterior lateral line nerve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001482 @@ -17363,10 +17366,10 @@ def: "Nerve fibers originating from the middle lateral line ganglion. These fib synonym: "middle lateral line nerves" EXACT PLURAL [] xref: TAO:0001482 is_a: ZFA:0001479 ! lateral line nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000175 ! posterior lateral line nerve relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001483 @@ -17376,9 +17379,9 @@ def: "The middle lateral line ganglion develops from a cranial ectodermal placod synonym: "middle lateral line ganglia" EXACT PLURAL [] xref: TAO:0001483 is_a: ZFA:0000120 ! lateral line ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001484 @@ -17389,8 +17392,8 @@ subset: cell_slim synonym: "superficial blastomeres" EXACT PLURAL [] xref: TAO:0001484 is_a: ZFA:0000093 ! blastomere -relationship: end ZFS:0000015 ! Blastula:Dome -relationship: start ZFS:0000007 ! Cleavage:64-cell +relationship: end ZFS:0000015 ! blastula:dome +relationship: start ZFS:0000007 ! cleavage:64-cell [Term] id: ZFA:0001485 @@ -17401,8 +17404,8 @@ synonym: "basal laminae" EXACT PLURAL [] xref: CARO:0000065 xref: TAO:0001485 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001486 @@ -17412,8 +17415,8 @@ def: "Portion of tissue, that consists of one or more layers of epithelial cells xref: CARO:0000066 xref: TAO:0001486 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001487 @@ -17423,9 +17426,9 @@ def: "Material anatomical entity in a gaseous, liquid, semisolid or solid state; xref: CARO:0000004 xref: TAO:0001487 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001488 @@ -17436,8 +17439,8 @@ synonym: "multi-tissue structures" EXACT PLURAL [] xref: CARO:0000055 xref: TAO:0001488 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001489 @@ -17448,8 +17451,8 @@ synonym: "compound organ components" EXACT PLURAL [] xref: CARO:0000019 xref: TAO:0001489 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001490 @@ -17460,8 +17463,8 @@ synonym: "cavitated compound organs" EXACT PLURAL [] xref: CARO:0000072 xref: TAO:0001490 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001491 @@ -17472,8 +17475,8 @@ synonym: "solid compound organs" EXACT PLURAL [] xref: CARO:0000074 xref: TAO:0001491 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001492 @@ -17484,8 +17487,8 @@ synonym: "simple organs" EXACT PLURAL [] xref: CARO:0000021 xref: TAO:0001492 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001493 @@ -17496,8 +17499,8 @@ synonym: "atypical epithelia" EXACT PLURAL [] xref: CARO:0000071 xref: TAO:0001493 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001494 @@ -17507,8 +17510,8 @@ def: "Epithelium that consists of more than one layer of epithelial cells." [GOC xref: CARO:0000069 xref: TAO:0001494 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001495 @@ -17519,8 +17522,8 @@ synonym: "unilaminar epithelia" EXACT PLURAL [] xref: CARO:0000073 xref: TAO:0001495 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001496 @@ -17531,8 +17534,8 @@ synonym: "simple columnar epithelia" EXACT PLURAL [] xref: CARO:0000068 xref: TAO:0001496 is_a: ZFA:0001495 ! unilaminar epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001497 @@ -17543,8 +17546,8 @@ synonym: "simple cuboidal epithelia" EXACT PLURAL [] xref: CARO:0000067 xref: TAO:0001497 is_a: ZFA:0001495 ! unilaminar epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001498 @@ -17555,8 +17558,8 @@ synonym: "simple squamous epithelia" EXACT PLURAL [] xref: CARO:0000070 xref: TAO:0001498 is_a: ZFA:0001495 ! unilaminar epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001499 @@ -17565,10 +17568,10 @@ namespace: zebrafish_anatomy def: "Simple columnar epithelium that lines the esophagus." [ZFIN:ZDB-PUB-070426-1] xref: TAO:0001499 is_a: ZFA:0001496 ! simple columnar epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000204 ! esophagus relationship: part_of ZFA:0005123 ! gut epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001500 @@ -17578,9 +17581,9 @@ def: "Bilaterally paired cartilage encasing the semicircular canals of the inner synonym: "otic capsule" EXACT [] xref: TAO:0001500 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001501 @@ -17591,8 +17594,8 @@ synonym: "cartilages" EXACT PLURAL [] xref: TAO:0001501 xref: VSAO:0000000 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001502 @@ -17601,9 +17604,9 @@ namespace: zebrafish_anatomy def: "Bilaterally paired medial bar of cartilage formed at midorbit through medial chondrification from triangles of cartilage that later form the junction of the taeniae marginales anterior, taeniae marginales posterior and the epiphyseal bar." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001502 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001503 @@ -17613,9 +17616,9 @@ def: "Cranial cartilage which is bilaterally paired and develops as a dorsal pla synonym: "laminas orbitonasalis" EXACT PLURAL [] xref: TAO:0001503 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001504 @@ -17625,9 +17628,9 @@ def: "Cranial cartilage which is a paired anterodorsal projection of the posteri synonym: "occipital arch cartilages" EXACT PLURAL [] xref: TAO:0001504 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001505 @@ -17638,10 +17641,10 @@ synonym: "orbital cartilage" RELATED [] synonym: "taeniae marginales anterior" EXACT PLURAL [] xref: TAO:0001505 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001506 @@ -17650,9 +17653,9 @@ namespace: zebrafish_anatomy def: "Unpaired thin dorsal sheet of cartilage that partially covers the posterior chondrocranium." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001506 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001507 @@ -17662,10 +17665,10 @@ def: "Paired thin medially aligned bar of cartilage that extends from the anteri synonym: "trabeculae cranii" EXACT PLURAL [] xref: TAO:0001507 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001321 ! neurocranial trabecula relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001508 @@ -17675,10 +17678,10 @@ def: "Cartilage formed via medial fusion between bilaterally paired trabecula cr synonym: "trabecular bar" EXACT [] xref: TAO:0001508 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001321 ! neurocranial trabecula relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001509 @@ -17689,8 +17692,8 @@ synonym: "scleral cartilage" RELATED [] synonym: "sclerotic cartilages" EXACT PLURAL [] xref: TAO:0001509 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001510 @@ -17700,9 +17703,9 @@ def: "Pharyngeal arch cartilage that is median and is the anterior-most cartilag synonym: "basihyal" RELATED [] xref: TAO:0001510 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001511 @@ -17714,9 +17717,9 @@ synonym: "interhyal bone" EXACT [] synonym: "stylohyal" EXACT [] xref: TAO:0001511 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001402 ! ventral hyoid arch -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001512 @@ -17727,8 +17730,8 @@ def: "Anatomical structure consisting of at least two non-overlapping organs, mu xref: CARO:0000054 xref: TAO:0001512 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001513 @@ -17739,8 +17742,8 @@ synonym: "dermomyotomes" EXACT PLURAL [] xref: TAO:0001513 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0000155 ! somite -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001514 @@ -17751,8 +17754,8 @@ synonym: "bones" EXACT PLURAL [] xref: TAO:0001514 xref: VSAO:0000057 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001515 @@ -17763,10 +17766,10 @@ synonym: "orbital cartilage" RELATED [] synonym: "taeniae marginales posterior" EXACT PLURAL [] xref: TAO:0001515 is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000290 ! sphenoid region relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001516 @@ -17776,9 +17779,9 @@ def: "Pharyngeal arch cartilage that forms the largest skeletal element of the v synonym: "ceratobranchial cartilages" EXACT PLURAL [] xref: TAO:0001516 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001517 @@ -17787,9 +17790,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 2 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001517 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001518 @@ -17798,9 +17801,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 3 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001518 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001519 @@ -17809,9 +17812,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is bilaterally paired and articulates laterally with epibranchial 4 cartilage or bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001519 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0001520 @@ -17820,9 +17823,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that forms between hypobranchial 1 and epibranchial 1." [TAO:curator] xref: TAO:0001520 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001521 @@ -17831,9 +17834,9 @@ namespace: zebrafish_anatomy def: "Ceratobranchial cartilage that is the most posterior, bilaterally paired ventral pharyngeal arch cartilage." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001521 is_a: ZFA:0001516 ! ceratobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001229 ! pharyngeal arch 7 skeleton -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001522 @@ -17843,9 +17846,9 @@ def: "Small rod-like cartilage that forms between the median copulae and the cer synonym: "hypobranchial cartilages" EXACT PLURAL [] xref: TAO:0001522 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0001523 @@ -17855,9 +17858,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 4; t synonym: "hypobranchial 4 cartilages" EXACT PLURAL [] xref: TAO:0001523 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001524 @@ -17867,9 +17870,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 1, l synonym: "hypobranchial 1 cartilages" EXACT PLURAL [] xref: TAO:0001524 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001525 @@ -17879,9 +17882,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 2, l synonym: "hypobranchial 2 cartilages" EXACT PLURAL [] xref: TAO:0001525 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001526 @@ -17891,9 +17894,9 @@ def: "Small cartilage that forms at the anteromedial tip of ceratobranchial 3, l synonym: "hypobranchial 3 cartilages" EXACT PLURAL [] xref: TAO:0001526 is_a: ZFA:0001522 ! hypobranchial cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001527 @@ -17903,9 +17906,9 @@ def: "Pharyngeal arch cartilage that is bilaterally paired small rod-like cartil synonym: "epibranchial cartilages" EXACT PLURAL [] xref: TAO:0001527 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000095 ! pharyngeal arch 3-7 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001528 @@ -17914,9 +17917,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 1 cartilage or bone and the medial end of pharyngobranchial 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001528 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001228 ! pharyngeal arch 3 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001529 @@ -17925,9 +17928,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 3 cartilage or bone and the medial end of pharyngobranchial 3." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001529 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001530 @@ -17936,9 +17939,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 2 cartilage or bone and the medial end of pharyngobranchial 2." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001530 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001531 @@ -17947,9 +17950,9 @@ namespace: zebrafish_anatomy def: "Epibranchial cartilage that is bilaterally paired and articulates laterally with ceratobranchial 4 cartilage or bone and the medial end of pharyngobranchial 4." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001531 is_a: ZFA:0001527 ! epibranchial cartilage -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001230 ! pharyngeal arch 6 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001532 @@ -17966,8 +17969,8 @@ def: "Paired cartilages that project medially from the medial tips of epibranchi synonym: "pharyngobranchial cartilages" EXACT PLURAL [] xref: TAO:0001533 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001534 @@ -17977,9 +17980,9 @@ def: "Paired elongate cartilages that lie posteromedial to epibranchial 2 and me synonym: "pharyngobranchial 3 cartilages" EXACT PLURAL [] xref: TAO:0001534 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001232 ! pharyngeal arch 5 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001535 @@ -17988,8 +17991,8 @@ namespace: zebrafish_anatomy synonym: "median fin cartilages" EXACT PLURAL [] xref: TAO:0001535 is_a: ZFA:0001457 ! postcranial axial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001536 @@ -17999,9 +18002,9 @@ def: "Paired disc-like cartilage lying medial to and between the medial tips of synonym: "pharyngobranchial 2 cartilages" EXACT PLURAL [] xref: TAO:0001536 is_a: ZFA:0001533 ! pharyngobranchial cartilage -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0001231 ! pharyngeal arch 4 skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001537 @@ -18011,8 +18014,8 @@ def: "Cartilage that develops initially on the medial side of the coraco-scapula synonym: "mesocorocoid cartilages" EXACT PLURAL [] xref: TAO:0001537 is_a: ZFA:0000257 ! pectoral fin cartilage -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001538 @@ -18022,8 +18025,8 @@ def: "Small cartilage that forms at the posterior edge of the basipterygium." [G synonym: "pelvic radial cartilages" EXACT PLURAL [] xref: TAO:0001538 is_a: ZFA:0001459 ! pelvic fin cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001539 @@ -18033,8 +18036,8 @@ def: "Bilaterally paired small, rodlike cartilages on the ventral surface of the synonym: "basipterygium cartilages" EXACT PLURAL [] xref: TAO:0001539 is_a: ZFA:0001459 ! pelvic fin cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001540 @@ -18044,8 +18047,8 @@ def: "Small cartilage that forms at the posterior and medial edge of the basipte synonym: "pelvic radials 3 cartilages" EXACT PLURAL [] xref: TAO:0001540 is_a: ZFA:0001538 ! pelvic radial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001541 @@ -18055,8 +18058,8 @@ def: "Small cartilage with a long posterior process and a shorter lateral one th synonym: "pelvic radials 2 cartilages" EXACT PLURAL [] xref: TAO:0001541 is_a: ZFA:0001538 ! pelvic radial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001542 @@ -18066,8 +18069,8 @@ def: "Small cartilage that forms at the posterior and lateral edge of the basipt synonym: "pelvic radials 1 cartilages" EXACT PLURAL [] xref: TAO:0001542 is_a: ZFA:0001538 ! pelvic radial cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001543 @@ -18077,9 +18080,9 @@ def: "Cartilage which is part of one of the paired fins." [GOC:mh, ORCiD:0000-00 synonym: "paired fin cartilages" EXACT PLURAL [] xref: TAO:0001543 is_a: ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000027 ! paired fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001544 @@ -18134,9 +18137,9 @@ synonym: "caudal fin lepidotrichia" EXACT PLURAL [] synonym: "caudal fin ray" EXACT [] xref: TAO:0001550 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001551 @@ -18147,9 +18150,9 @@ synonym: "pectoral fin lepidotrichia" EXACT PLURAL [] synonym: "pectoral fin ray" EXACT [] xref: TAO:0001551 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001552 @@ -18160,9 +18163,9 @@ synonym: "pelvic fin lepidotrichia" EXACT PLURAL [] synonym: "pelvic fin ray" EXACT [] xref: TAO:0001552 is_a: ZFA:0001554 ! lepidotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001553 @@ -18181,8 +18184,8 @@ synonym: "fin ray" EXACT [] synonym: "lepidotrichia" EXACT PLURAL [] xref: TAO:0001554 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001555 @@ -18193,8 +18196,8 @@ synonym: "epibranchial ganglia" EXACT PLURAL [] xref: TAO:0001555 is_a: ZFA:0000013 ! cranial ganglion relationship: develops_from ZFA:0001294 ! epibranchial placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001556 @@ -18204,9 +18207,9 @@ def: "Trunk ganglion which is part of a bilaterally paired set of sympathetic ga synonym: "paravertebral ganglion" EXACT [] xref: TAO:0001556 is_a: ZFA:0001573 ! trunk ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001557 @@ -18218,9 +18221,9 @@ synonym: "pronephric glomeruli" EXACT PLURAL [] synonym: "pronephric glomus " EXACT [] xref: TAO:0001557 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001558 @@ -18230,9 +18233,9 @@ def: "Bilaterally paired tubes connecting the pronephric glomeruli to the pronep synonym: "ciliated neck segment" EXACT [] xref: TAO:0001558 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001559 @@ -18240,9 +18243,9 @@ name: vertebral column namespace: zebrafish_anatomy xref: TAO:0001559 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000317 ! postcranial axial skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001560 @@ -18251,8 +18254,8 @@ namespace: zebrafish_anatomy def: "Ventral most hypural of the caudal fin. Supports the lower lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001560 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0001561 @@ -18261,8 +18264,8 @@ namespace: zebrafish_anatomy def: "Hypural of the caudal fin dorsal to hypural 1. Supports the lower lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001561 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0001562 @@ -18271,8 +18274,8 @@ namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 2 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001562 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000038 ! larval:day 6 [Term] id: ZFA:0001563 @@ -18281,8 +18284,8 @@ namespace: zebrafish_anatomy def: "Hypural dorsal to hypural 3 that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001563 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001564 @@ -18291,8 +18294,8 @@ namespace: zebrafish_anatomy def: "Dorsal-most hypural, that supports the upper lobe of the caudal fin." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001564 is_a: ZFA:0000364 ! hypural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001565 @@ -18307,9 +18310,9 @@ synonym: "previtellogenic oocyte" RELATED [ZFIN:ZDB-PUB-140513-387] synonym: "Stage 2 oocyte" EXACT [] xref: TAO:0001565 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001265 ! ovarian follicle stage II -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001566 @@ -18324,9 +18327,9 @@ synonym: "Stage 3 oocyte" EXACT [] synonym: "vitellogenic oocytes" EXACT [] xref: TAO:0001566 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001266 ! ovarian follicle stage III -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001567 @@ -18341,9 +18344,9 @@ synonym: "primary oocyte" EXACT [] synonym: "Stage 1 oocyte" EXACT [] xref: TAO:0001567 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001263 ! ovarian follicle stage I -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001568 @@ -18358,9 +18361,9 @@ synonym: "postvitellogenic oocyte" RELATED [ZFIN:ZDB-PUB-140513-387] synonym: "Stage 4 oocyte" EXACT [] xref: TAO:0001568 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001264 ! ovarian follicle stage IV -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001569 @@ -18373,8 +18376,8 @@ synonym: "mature egg" EXACT [] synonym: "unactivated egg" EXACT [] xref: TAO:0001569 is_a: ZFA:0001109 ! oocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0001570 @@ -18389,8 +18392,8 @@ xref: CL:0000025 xref: TAO:0001570 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001569 ! oocyte stage V -relationship: end ZFS:0000001 ! Zygote:1-cell -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000001 ! zygote:1-cell +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001571 @@ -18400,8 +18403,8 @@ def: "A follicle that has undergone ovulation and no longer contains an oocyte." synonym: "postovulatory follicles" EXACT PLURAL [] xref: TAO:0001571 is_a: ZFA:0001110 ! ovarian follicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0001572 @@ -18412,9 +18415,9 @@ synonym: "SCG" RELATED [] synonym: "superior sympathetic cervical ganglion" EXACT [] xref: TAO:0001572 is_a: ZFA:0001573 ! trunk ganglion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001573 @@ -18424,8 +18427,8 @@ def: "Ganglion which is located in the trunk." [GOC:mh, ORCiD:0000-0001-9114-873 synonym: "trunk ganglia" EXACT PLURAL [] xref: TAO:0001573 is_a: ZFA:0000190 ! ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0001574 @@ -18435,8 +18438,8 @@ def: "Nervous system that innervates smooth muscle, cardiac muscle and glands. synonym: "ANS" EXACT [] xref: TAO:0001574 is_a: ZFA:0000396 ! nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001575 @@ -18445,8 +18448,8 @@ namespace: zebrafish_anatomy def: "Autonomic nervous system where the cell bodies lie in the brain and sacral region of the spinal cord. The neurons are mainly cholinergic." [GOC:GOC, GOC:ymb, ISBN:0080923437, ORCiD:0000-0002-9900-7880] xref: TAO:0001575 is_a: ZFA:0001574 ! autonomic nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001576 @@ -18455,8 +18458,8 @@ namespace: zebrafish_anatomy def: "Autonomic nervous system that originates beginning at the thoracic and lumbar areas of the spinal cord. Sympathetic neurons are primarily adrenergic producing the neurotransmitter noradrenalin along with other neuropeptides." [GOC:cvs, GOC:ymb, ISBN:0080923437, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001576 is_a: ZFA:0001574 ! autonomic nervous system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001577 @@ -18466,9 +18469,9 @@ def: "Process of the premaxilla that extends posteriorly and overlays the meseth synonym: "premaxilla ascending processes" EXACT PLURAL [] xref: TAO:0001577 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000567 ! premaxilla -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001578 @@ -18478,9 +18481,9 @@ def: "In cypriniforms the anterior portion of the palatine has a dorsomedial pro synonym: "anterior dorsomedial process of autopalatines" EXACT PLURAL [] xref: TAO:0001578 is_a: ZFA:0001637 ! bony projection -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000620 ! autopalatine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001579 @@ -18489,9 +18492,9 @@ namespace: zebrafish_anatomy def: "Ural vertebra that is the second vertebra posterior to preural centrum 1." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001579 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001580 @@ -18501,9 +18504,9 @@ def: "Anatomical cluster that is the regional skeletal system surrounding the br synonym: "braincase" EXACT [] xref: TAO:0001580 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001581 @@ -18512,9 +18515,9 @@ namespace: zebrafish_anatomy def: "A vertebral centrum that is located immediately posterior to ural centrum 1. Ural centrum 2 is an unpaired median bone." [TAO:curator] xref: TAO:0001581 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001579 ! ural vertebra 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001582 @@ -18524,8 +18527,8 @@ def: "Precaudal vertebra that is not a Weberian vertebra. Vertebra 5 through 14 synonym: "non-Weberian precaudal vertebrae" EXACT PLURAL [] xref: TAO:0001582 is_a: ZFA:0000263 ! precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001583 @@ -18535,9 +18538,9 @@ def: "Vertebra which is the fused centra of preural 1 and ural 1. These elements synonym: "urostyle " RELATED [] xref: TAO:0001583 is_a: ZFA:0001189 ! vertebra -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001584 @@ -18548,8 +18551,8 @@ synonym: "caudal procurrent lepidotrichium" EXACT [] synonym: "caudal procurrent ray " RELATED [] xref: TAO:0001584 is_a: ZFA:0001550 ! caudal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001585 @@ -18560,8 +18563,8 @@ synonym: "caudal principal lepidotrichium" EXACT [] synonym: "caudal principal ray" EXACT [] xref: TAO:0001585 is_a: ZFA:0001550 ! caudal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001586 @@ -18572,9 +18575,9 @@ synonym: "pectoral fin radials" EXACT PLURAL [] xref: TAO:0001586 is_a: ZFA:0000271 ! radial relationship: develops_from ZFA:0001456 ! pectoral fin endoskeletal disc -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001587 @@ -18583,8 +18586,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin radial which develops from the pectoral fin endoskeletal disc, supports a few pectoral lepidotrichia or fin rays and connects the lepidotrichia and distal radials with the primary pectoral girdle (scapula and coracoid)." [TAO:curator] xref: TAO:0001587 is_a: ZFA:0001586 ! pectoral fin radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001588 @@ -18594,8 +18597,8 @@ def: "Pectoral fin radial, develops from the pectoral fin endoskeletal disc, and synonym: "pectoral fin distal radials" EXACT PLURAL [] xref: TAO:0001588 is_a: ZFA:0001586 ! pectoral fin radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001589 @@ -18605,8 +18608,8 @@ def: "The propterygium is the lateralmost or anteriormost basal cartilage that o synonym: "propterygia" EXACT PLURAL [] xref: TAO:0001589 is_a: ZFA:0001588 ! pectoral fin distal radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001590 @@ -18616,8 +18619,8 @@ def: "Intramembranous bone that forms superficially in the organism. Dermal bon synonym: "dermal bones" EXACT PLURAL [] xref: TAO:0001590 is_a: ZFA:0001635 ! intramembranous bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001591 @@ -18629,8 +18632,8 @@ xref: TAO:0001591 is_a: ZFA:0001693 ! chondral bone is_a: ZFA:0005620 ! endochondral element relationship: develops_from ZFA:0001501 ! cartilage element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001592 @@ -18642,8 +18645,8 @@ is_a: ZFA:0000461 ! Weberian ossicle is_a: ZFA:0001591 ! endochondral bone is_a: ZFA:0001636 ! membrane bone relationship: develops_from ZFA:0000637 ! claustrum cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001593 @@ -18653,9 +18656,9 @@ def: "An endochondral bone that is the ventral, posteriorly-oriented bony extens synonym: "quadrate ventral processes" EXACT PLURAL [] xref: TAO:0000224 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000621 ! quadrate -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001594 @@ -18668,10 +18671,10 @@ synonym: "preopercle lower limb" EXACT [] synonym: "preopercle ventral arm" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0000289 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005631 ! preopercle horizontal limb-symplectic joint relationship: part_of ZFA:0000264 ! preopercle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001595 @@ -18684,10 +18687,10 @@ synonym: "preopercle upper limb" EXACT [] synonym: "preopercle vertical arm" EXACT [] xref: TAO:0000336 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005632 ! preopercle vertical limb-hyomandibula joint relationship: part_of ZFA:0000264 ! preopercle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001596 @@ -18697,9 +18700,9 @@ def: "Anatomical cluster which consists of two or more adjacent bones or cartila synonym: "joints" EXACT PLURAL [] xref: TAO:0000367 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000434 ! skeletal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001597 @@ -18709,10 +18712,10 @@ def: "Endochondral bone which is the posteroventral region of the exoccipital bo synonym: "exoccipitals posteroventral regions" EXACT PLURAL [] xref: TAO:0000348 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000661 ! exoccipital relationship: part_of ZFA:0001627 ! lagenar capsule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001598 @@ -18721,10 +18724,10 @@ namespace: zebrafish_anatomy def: "Endochondral bone which is the posterodorsal region of the basioccipital bone." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0000337 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000472 ! basioccipital relationship: part_of ZFA:0001627 ! lagenar capsule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001599 @@ -18732,9 +18735,9 @@ name: os suspensorium medial flange namespace: zebrafish_anatomy xref: TAO:0002214 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001171 ! os suspensorium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001600 @@ -18743,8 +18746,8 @@ namespace: zebrafish_anatomy def: "Neural spine that is located on the fourth vertebra." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001546 is_a: ZFA:0001336 ! neural spine -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001601 @@ -18757,9 +18760,9 @@ synonym: "horizontal process" EXACT [] synonym: "manubrium incudus" EXACT [] xref: TAO:0001553 is_a: ZFA:0001636 ! membrane bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001602 @@ -18768,9 +18771,9 @@ namespace: zebrafish_anatomy def: "Bony process that develops as a dorsally projecting cartilaginous extension from the basidorsal. The ascending process is longer relative to the manubrium in larvae (5.1-11.0 mm). By 13.0 mm, the ascending process appears highly reduced in size." [ZFIN:ZDB-PUB-031103-13] xref: TAO:0001548 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001603 @@ -18780,9 +18783,9 @@ def: "Portion of the intercalarium that ossifies from the cartilage condensatio synonym: "articular process" RELATED [] xref: TAO:0001549 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000525 ! intercalarium -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001604 @@ -18792,9 +18795,9 @@ def: "Surface structure that is the dorsal portion of the caudal fin." [GOC:cvs, synonym: "caudal fin dorsal lobe" EXACT [] xref: TAO:0001593 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001605 @@ -18804,9 +18807,9 @@ def: "Surface structure that is the ventral portion of the caudal fin." [GOC:cvs synonym: "caudal fin ventral lobe" EXACT [] xref: TAO:0001594 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001606 @@ -18817,8 +18820,8 @@ synonym: "gill arch 1" EXACT [] synonym: "visceral arch 3" EXACT [] xref: TAO:0001598 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001607 @@ -18829,8 +18832,8 @@ synonym: "gill arch 2" EXACT [] synonym: "visceral arch 4" EXACT [] xref: TAO:0001599 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001608 @@ -18841,8 +18844,8 @@ synonym: "gill arch 3" EXACT [] synonym: "visceral arch 5" EXACT [] xref: TAO:0001600 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001609 @@ -18853,8 +18856,8 @@ synonym: "gill arch 4" EXACT [] synonym: "visceral arch 6" EXACT [] xref: TAO:0001601 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001610 @@ -18865,8 +18868,8 @@ synonym: "gill arch 5" EXACT [] synonym: "visceral arch 7" EXACT [] xref: TAO:0001602 is_a: ZFA:0001613 ! pharyngeal arch 3-7 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001611 @@ -18877,8 +18880,8 @@ synonym: "hyoid arch" EXACT [] synonym: "visceral arch 2" EXACT [] xref: TAO:0001596 is_a: ZFA:0001306 ! pharyngeal arch -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001612 @@ -18889,8 +18892,8 @@ synonym: "mandibular arch" EXACT [] synonym: "visceral arch 1" EXACT [] xref: TAO:0001595 is_a: ZFA:0001306 ! pharyngeal arch -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001613 @@ -18908,10 +18911,10 @@ synonym: "visceral arches 3-7" EXACT [] xref: TAO:0000625 xref: TAO:0001597 is_a: ZFA:0001306 ! pharyngeal arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000056 ! pharynx relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001614 @@ -18920,9 +18923,9 @@ namespace: zebrafish_anatomy def: "Endocardium that is part of the atrium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002169 is_a: ZFA:0001320 ! endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001615 @@ -18931,9 +18934,9 @@ namespace: zebrafish_anatomy def: "Endocardium that is part of the cardiac ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002247 is_a: ZFA:0001320 ! endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001616 @@ -18942,9 +18945,9 @@ namespace: zebrafish_anatomy def: "Endocardium that is part of the atrioventricular canal." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002170 is_a: ZFA:0001320 ! endocardium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001315 ! atrioventricular canal -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001617 @@ -18957,10 +18960,10 @@ synonym: "immature otoliths" RELATED PLURAL [] synonym: "statolith" EXACT [] xref: TAO:0001621 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000051 ! otic vesicle relationship: part_of ZFA:0000559 ! otolith organ -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001618 @@ -18977,9 +18980,9 @@ synonym: "nerve fiber layer" EXACT [] synonym: "optic fiber layers" EXACT PLURAL [] xref: TAO:0002212 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000046 ! retinal neural layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001620 @@ -18989,9 +18992,9 @@ def: "Most anterior portion of the pronephric duct (or tubule as described by Wi synonym: "PCT" EXACT [] xref: TAO:0002238 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001621 @@ -19001,9 +19004,9 @@ def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2 synonym: "proximal straight tubules" EXACT PLURAL [] xref: TAO:0002239 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001622 @@ -19013,9 +19016,9 @@ def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2 synonym: "pronephric distal early tubules" EXACT PLURAL [] xref: TAO:0002236 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001623 @@ -19025,9 +19028,9 @@ def: "Most posterior portion of the pronephric duct (or tubule as described by W synonym: "posterior pronephric ducts" EXACT PLURAL [] xref: TAO:0002225 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001624 @@ -19036,9 +19039,9 @@ namespace: zebrafish_anatomy def: "Portion of the pronephric duct (or tubule as described by Wingert et al, 2007) which is just posterior to the distal early tubule." [ZFIN:ZDB-PUB-071029-9] synonym: "distal late tubules" EXACT PLURAL [] is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000150 ! pronephric duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001625 @@ -19048,9 +19051,9 @@ def: "Portion of cranial nerve II where large fascicles of axons from the optic synonym: "optic nerve heads" EXACT PLURAL [] xref: TAO:0002213 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000435 ! cranial nerve II -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001626 @@ -19060,8 +19063,8 @@ def: "Portion of organism substance that is a clear fluid that occupies the suba synonym: "CSF" EXACT [] xref: TAO:0002184 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001627 @@ -19071,8 +19074,8 @@ def: "Anatomical cluster that consists of a bulla formed by the exoccipital and synonym: "lagenar capsules" EXACT PLURAL [] xref: TAO:0001620 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001628 @@ -19083,8 +19086,8 @@ synonym: "replacement bones" EXACT PLURAL [] xref: TAO:0001637 is_a: ZFA:0001514 ! bone element is_a: ZFA:0005624 ! replacement element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001629 @@ -19094,8 +19097,8 @@ def: "Replacement bone that forms within the connective tissue surrounding the n synonym: "perichordal bones" EXACT PLURAL [] xref: TAO:0001639 is_a: ZFA:0001628 ! replacement bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001630 @@ -19106,8 +19109,8 @@ synonym: "perichondral bones" EXACT PLURAL [] xref: TAO:0001638 is_a: ZFA:0001693 ! chondral bone relationship: develops_from ZFA:0001634 ! perichondrium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001631 @@ -19117,8 +19120,8 @@ def: "Perichordal bone that surrounds the anterior tip of the notochord." [GOC:m xref: TAO:0001640 is_a: ZFA:0001629 ! perichordal bone relationship: develops_from ZFA:0001633 ! perichordal connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001632 @@ -19128,8 +19131,8 @@ def: "Portion of tissue that consists of mesodermally derived cells and intercel xref: TAO:0001641 xref: VSAO:0000017 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001633 @@ -19138,8 +19141,8 @@ namespace: zebrafish_anatomy def: "Portion of connective tissue which surrounds the notochord." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001642 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001634 @@ -19149,8 +19152,8 @@ def: "Portion of connective tissue which surrounds cartilage." [GOC:mh, ORCiD:00 synonym: "cartilage connective tissue" EXACT [] xref: TAO:0001643 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001635 @@ -19161,8 +19164,8 @@ synonym: "intramembranous bones" EXACT PLURAL [] xref: TAO:0001644 is_a: ZFA:0001514 ! bone element relationship: develops_from ZFA:0000393 ! mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001636 @@ -19172,8 +19175,8 @@ def: "Intramembranous bone that forms deep in the organism." [GOC:mh, ORCiD:0000 synonym: "membrane bones" EXACT PLURAL [] xref: TAO:0001645 is_a: ZFA:0001635 ! intramembranous bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001637 @@ -19185,9 +19188,9 @@ synonym: "process" EXACT [TAO:0001834] xref: TAO:0001646 xref: TAO:0001834 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001514 ! bone element -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001638 @@ -19198,9 +19201,9 @@ synonym: "octaval nucleus" EXACT [] synonym: "vestibulocochlear nucleus" EXACT [] xref: TAO:0002243 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001639 @@ -19210,9 +19213,9 @@ def: "Simple squamous epithelium which lines blood and lymphatic vessels and the synonym: "endothelia" EXACT PLURAL [] xref: TAO:0002171 is_a: ZFA:0001498 ! simple squamous epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001640 @@ -19222,9 +19225,9 @@ def: "Ventral bend in the brain occurring caudal to the adenohypophyseal placode synonym: "ventral flexure" EXACT [] xref: TAO:0002181 is_a: ZFA:0005593 ! neuraxis flexure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001641 @@ -19233,9 +19236,9 @@ namespace: zebrafish_anatomy def: "Neural arch on the urostyle. It does not support a neural spine. Sanger and McCune 2002." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001666 is_a: ZFA:0001066 ! neural arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000158 ! urostyle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001642 @@ -19245,8 +19248,8 @@ def: "Anatomical cluster consisting of adjacent teeth constituting a row." [GOC: synonym: "tooth rows" EXACT PLURAL [] xref: TAO:0001667 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001643 @@ -19258,8 +19261,8 @@ synonym: "anatomical spaces" EXACT PLURAL [] xref: CARO:0000005 xref: TAO:0001668 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0001644 @@ -19269,8 +19272,8 @@ def: "Cartilage of the lower jaw that give rise to a portion of the anguloarticu synonym: "articular cartilages" EXACT PLURAL [] xref: TAO:0001670 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001645 @@ -19280,8 +19283,8 @@ def: "Dermal bone that is located posterior to the dentary and lateral to the ar synonym: "angular bones" EXACT PLURAL [] xref: TAO:0001669 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001646 @@ -19292,8 +19295,8 @@ synonym: "anal fin pterygiophores" RELATED [] synonym: "anal fin radials" EXACT PLURAL [] xref: TAO:0001671 is_a: ZFA:0000271 ! radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001647 @@ -19304,8 +19307,8 @@ synonym: "dorsal fin pterygiophore " RELATED [] synonym: "dorsal fin radials" EXACT PLURAL [] xref: TAO:0001672 is_a: ZFA:0000271 ! radial -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001648 @@ -19314,8 +19317,8 @@ namespace: zebrafish_anatomy def: "Neural crest that migrates into the pharyngeal arches and heart, forming connective tissue that separates the vessels of the heart." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0002173 is_a: ZFA:0000045 ! neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001649 @@ -19325,8 +19328,8 @@ def: "Anatomical cluster that is the series of dermal bones associated with the synonym: "circumorbital series" EXACT [] xref: TAO:0001709 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 [Term] id: ZFA:0001650 @@ -19335,8 +19338,8 @@ namespace: zebrafish_anatomy synonym: "gill mesenchyme" EXACT [] xref: TAO:0002172 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001651 @@ -19350,9 +19353,9 @@ synonym: "sternohyoids" EXACT [] xref: TAO:0000283 xref: TAO:0002200 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0005923 ! anterior migratory muscle precursor stream -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0001652 @@ -19363,9 +19366,9 @@ synonym: "cephalic muscle" EXACT [] synonym: "cranial muscle " RELATED [] xref: TAO:0002198 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000328 ! cephalic musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001653 @@ -19374,9 +19377,9 @@ namespace: zebrafish_anatomy def: "Muscle which is paired and runs anterio-posteriorly along the heart and is covered with epicardium." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-001026-2] xref: TAO:0002221 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000473 ! trunk musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001654 @@ -19385,9 +19388,9 @@ namespace: zebrafish_anatomy def: "Anatomical space which is located beneath the operculum and external to the gills." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002154 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001655 @@ -19397,10 +19400,10 @@ def: "Anatomical space in which the heart is located and is surrounded by the pe synonym: "thoracic cavity" EXACT [] xref: TAO:0002220 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001438 ! coelom relationship: part_of ZFA:0007115 ! pericardial region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001656 @@ -19412,10 +19415,10 @@ synonym: "coelomic cavity" RELATED [] synonym: "visceral cavity" EXACT [] xref: TAO:0002224 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001438 ! coelom relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001657 @@ -19425,9 +19428,9 @@ def: "CNS tract/commissure which extends between the telencephalon and diencepha synonym: "SOT" EXACT [] xref: TAO:0002244 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001658 @@ -19436,9 +19439,9 @@ namespace: zebrafish_anatomy def: "Nucleus located within the hindbrain." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002177 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001659 @@ -19448,9 +19451,9 @@ def: "Brain nucleus part of the diencephalon." [GOC:mh, ORCiD:0000-0001-9114-873 xref: TAO:0002191 is_a: ZFA:0001488 ! multi-tissue structure is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001660 @@ -19458,9 +19461,9 @@ name: telencephalic nucleus namespace: zebrafish_anatomy xref: TAO:0002178 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001662 @@ -19469,9 +19472,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located in the caudal tuberculum. The preglomerular nuclei make up most of the migrated nuclei within the caudal tuberculum. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0002226 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001663 @@ -19480,9 +19483,9 @@ namespace: zebrafish_anatomy def: "The portion of tissue that is the initial segment of one of the cranial nerves leaving the central nervous system." [http://en.wikipedia.org/wiki/Nerve_root] xref: TAO:0002190 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000641 ! cranial nerve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001665 @@ -19491,9 +19494,9 @@ namespace: zebrafish_anatomy def: "Nucleus located in the midbrain." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002209 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001666 @@ -19502,9 +19505,9 @@ namespace: zebrafish_anatomy def: "Telencephalic nucleus which is in contact with the median ependymal lining of the ventricle and consists of the dorsal, ventral, supracommissural and postcommissural nuclei of the ventral telencephalon. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0002222 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000304 ! ventral telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001667 @@ -19513,9 +19516,9 @@ namespace: zebrafish_anatomy def: "Telencephalic nucleus which has migrated away from the ependyma and consists of the central, lateral nuclei and the dorsal and ventral entopeduncular nuclei. From Neuroanatomy of the Zebrafish Brain." [GOC:mh, ISBN:3764351209, ORCiD:0000-0001-9114-8737] xref: TAO:0002179 is_a: ZFA:0001660 ! telencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000304 ! ventral telencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001668 @@ -19525,8 +19528,8 @@ def: "Peripheral nucleus of the ventral telencephalon which is located immediate synonym: "area ventralis telencephali, nucleus centralis" EXACT [] xref: TAO:0002180 is_a: ZFA:0001667 ! peripheral nucleus of ventral telencephalon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001669 @@ -19535,9 +19538,9 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus which is located between the dorsal hypothalamus and the caudal tuberal nucleus and does not contain tyrosine hydroxylase immunoreactive cells." [ZFIN:ZDB-PUB-001220-2] xref: TAO:0002202 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000633 ! caudal tuberculum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001670 @@ -19546,10 +19549,10 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is the part of the notochord located in the caudal fin." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001821 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000135 ! notochord relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0001671 @@ -19558,9 +19561,9 @@ namespace: zebrafish_anatomy def: "Epithelium that is the primary epithelium of the developing inner ear and has anterior and posterior maculae as its parts. These maculae later move apart into distinct regions of epithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-383] xref: TAO:0002206 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001672 @@ -19570,10 +19573,10 @@ def: "Portion of tissue that grows in from the dorsolateral wall of the otic ves synonym: "dorsal bar" RELATED [] xref: TAO:0002193 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000262 ! posterior semicircular canal relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0001673 @@ -19583,9 +19586,9 @@ def: "Podocyte that is part of the pronephros." [GOC:cvs, ORCiD:0000-0002-2244-7 subset: cell_slim xref: TAO:0002237 is_a: ZFA:0009285 ! podocyte -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001674 @@ -19595,9 +19598,9 @@ def: "Podocyte that is part of the kidney (mesonephros)." [GOC:cvs, ORCiD:0000-0 subset: cell_slim xref: TAO:0002208 is_a: ZFA:0009285 ! podocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001288 ! renal glomerulus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0001675 @@ -19606,8 +19609,8 @@ namespace: zebrafish_anatomy def: "Portion of connective tissue that is a fibrous band connecting bones or cartilages or supporting an organ." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001682 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001676 @@ -19616,9 +19619,9 @@ namespace: zebrafish_anatomy def: "Ligament that is in the eye and is located at the angle between the cornea and the iris." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070629-16] xref: TAO:0002141 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0001677 @@ -19627,9 +19630,9 @@ namespace: zebrafish_anatomy def: "Floor plate that is part of the midbrain." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0002196 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000022 ! floor plate -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0001678 @@ -19639,8 +19642,8 @@ def: "Multi-tissue structure that consists of the structures that develop into t comment: Dbxref for ZFIN changed to match actual database accession number. Old Dbxref ZDB-ANAT-090226-1 correct Dbxref ZDB-ANAT-090227-5. xref: TAO:0002201 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0001679 @@ -19655,9 +19658,9 @@ synonym: "presumptive lens" RELATED [] xref: TAO:0002205 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000122 ! lens placode -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0001680 @@ -19666,8 +19669,8 @@ namespace: zebrafish_anatomy def: "Diencephalic nucleus that is part of the preoptic area. From Neuroanatomy of the Zebrafish Brain." [ISBN:3764351209] xref: TAO:0002219 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-03-23T01:16:53Z @@ -19680,9 +19683,9 @@ synonym: "gray mater" RELATED [] synonym: "gray matter" EXACT [] xref: TAO:0002197 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-03-23T01:47:27Z @@ -19699,9 +19702,9 @@ xref: TAO:0000145 xref: TAO:0002142 xref: TAO:0002143 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Melissa Haendel creation_date: 2009-03-23T01:50:38Z @@ -19712,9 +19715,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue comprised of four to six layers of nonkeratinized, stratified squamous cells and represents approximately 60% of the thickness of the cornea." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002187 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:11:11Z @@ -19727,9 +19730,9 @@ synonym: "anterior elastic lamina" EXACT [] synonym: "anterior limiting membrane" RELATED [] xref: TAO:0002155 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Melissa Haendel creation_date: 2009-03-23T02:11:47Z @@ -19740,9 +19743,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is located basal to Bowman's layer and distal to Descemet's membrane and is comprised largely of connective tissue." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002189 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:16Z @@ -19754,9 +19757,9 @@ def: "Acellular anatomical structure composed of collagen, Descemet's membrane i synonym: "posterior limiting membrane" EXACT [] xref: TAO:0002157 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:12:32Z @@ -19767,9 +19770,9 @@ namespace: zebrafish_anatomy def: "Epithelium that is the innermost layer of the cornea and is comprised of a monolayer of polygonal cells." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002186 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000640 ! cornea -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-03-23T02:13:25Z @@ -19780,9 +19783,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the eye and gives rise to the mature, fully layered cornea." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-061010-3] xref: TAO:0002188 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-03-23T04:36:20Z @@ -19794,8 +19797,8 @@ def: "Non-material anatomical entity of one dimension, which forms a boundary of xref: CARO:0000008 xref: TAO:0001837 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell created_by: Melissa Haendel creation_date: 2009-04-30T02:46:34Z @@ -19806,8 +19809,8 @@ namespace: zebrafish_anatomy def: "Anatomical structure that delineates a furrow or depression in an organ or tissue." [GOC:mh, ORCiD:0000-0001-9114-8737] xref: TAO:0001838 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000001 ! zygote:1-cell created_by: Melissa Haendel creation_date: 2009-04-30T02:48:53Z @@ -19820,10 +19823,10 @@ subset: cell_slim xref: CL:0001031 xref: TAO:0002182 is_a: ZFA:0009070 ! granule cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000358 ! granular layer corpus cerebelli relationship: part_of ZFA:0000766 ! granular layer valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-04-30T03:18:48Z @@ -19834,9 +19837,9 @@ namespace: zebrafish_anatomy def: "CNS white matter that crosses the midline within the hindbrain." [GOC:mh, ORCiD:0000-0001-9114-8737, ZFIN:ZDB-PUB-090417-11] xref: TAO:0002199 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-06-18T12:33:21Z @@ -19846,8 +19849,8 @@ name: chondral bone namespace: zebrafish_anatomy def: "Replacement bone that forms within or surrounding a cartilaginous skeletal element." [GOC:mh, ORCiD:0000-0001-9114-8737] is_a: ZFA:0001628 ! replacement bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-07-29T11:34:33Z @@ -19860,9 +19863,9 @@ subset: cell_slim xref: CL:0000626 xref: TAO:0002211 is_a: ZFA:0009070 ! granule cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000402 ! olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-04-30T03:21:40Z @@ -19874,8 +19877,8 @@ def: "Motor nucleus of vagal nerve that is located within the dorsolateral porti synonym: "dlX" EXACT [] xref: TAO:0002192 is_a: ZFA:0000387 ! motor nucleus of vagal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-08-04T10:42:49Z @@ -19887,8 +19890,8 @@ def: "Motor nucleus of vagal nerve that is located within the medial portion of synonym: "mmX" EXACT [] xref: TAO:0002207 is_a: ZFA:0000387 ! motor nucleus of vagal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Melissa Haendel creation_date: 2009-08-04T10:45:00Z @@ -19902,9 +19905,9 @@ synonym: "octaval nerve motor nuclei" EXACT PLURAL [] synonym: "OLe" EXACT [] xref: TAO:0002174 is_a: ZFA:0001658 ! hindbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:04:59Z @@ -19919,8 +19922,8 @@ synonym: "rostral cranial nerve VIII motor nucleus" EXACT [] synonym: "rostral efferent nuclei" RELATED PLURAL [ZFIN:ZDB-PUB-061229-17] xref: TAO:0002175 is_a: ZFA:0001697 ! octaval nerve motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:21:34Z @@ -19935,8 +19938,8 @@ synonym: "RELL" EXACT [] synonym: "rostral cranial nerve VIII motor nucleus" EXACT [] xref: TAO:0002176 is_a: ZFA:0001697 ! octaval nerve motor nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-04T01:24:26Z @@ -19947,9 +19950,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the external layer of the swim bladder that is covered by the peritoneum, and made of elastic fibres and ichthyocol (short needles of collagen)." [http://www.briancoad.com/Dictionary/T.htm] xref: TAO:0002245 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-05T12:54:11Z @@ -19960,9 +19963,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the internal layer of the swim bladder and is comprised of thin endoderm and a smooth muscle layer called the muscularis mucosa with longitudinal and circular fibres with some collagen." [http://www.briancoad.com/Dictionary/T.htm] xref: TAO:0002246 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000076 ! swim bladder -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-05T12:55:22Z @@ -19973,8 +19976,8 @@ namespace: zebrafish_anatomy def: "Proliferative region that is part of the developing fin fold or fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002146 is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Melissa Haendel creation_date: 2009-08-05T02:38:05Z @@ -19985,9 +19988,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is a thickening and reshaping of the epidermal basal stratum cells beneath which fibroblasts accumulate to form the scale primordium." [ZFIN:ZDB-PUB-081008-12] xref: TAO:0002195 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001180 ! epidermal basal stratum -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:22:18Z @@ -20000,9 +20003,9 @@ synonym: "scale placode" RELATED [] synonym: "scale primordia " EXACT PLURAL [] xref: TAO:0002242 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Melissa Haendel creation_date: 2009-08-05T03:35:05Z @@ -20013,9 +20016,9 @@ namespace: zebrafish_anatomy def: "Duct that is part of the inner ear and connects to the semicircular canals ending in the endolymphatic sac." [http://en.wikipedia.org/wiki/Endolymphatic_duct, ZFIN:ZDB-PUB-090112-20] xref: TAO:0002194 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-11T09:15:55Z @@ -20026,9 +20029,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the corpus cerebelli and contains Purkinje cells." [ZFIN:ZDB-PUB-090422-9] xref: TAO:0002240 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-11T09:41:06Z @@ -20039,9 +20042,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that has as its parts the medulla oblongata of the hindbrain and the tegmentum of the midbrain." [ISBN:3764351209] xref: TAO:0002156 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T01:39:24Z @@ -20053,9 +20056,9 @@ def: "CNS white matter that is part of the cerebellum." [GOC:mh, ORCiD:0000-0001 synonym: "cerebellar tracts/commissures" EXACT PLURAL [] xref: TAO:0002183 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000100 ! cerebellum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T01:48:48Z @@ -20066,9 +20069,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the valvula cerebelli and contains Purkinje cells." [ZFIN:ZDB-PUB-090422-9] xref: TAO:0002241 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:00:08Z @@ -20080,10 +20083,10 @@ def: "Portion of tissue that consists of afferent axons from the spinal cord, se synonym: "mossy fibers" EXACT PLURAL [] xref: TAO:0002210 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:02:35Z @@ -20095,10 +20098,10 @@ def: "Portion of tissue that consists of afferent axons from the inferior olive synonym: "climbing fibers" EXACT PLURAL [] xref: TAO:0002185 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000188 ! corpus cerebelli relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T03:18:48Z @@ -20110,9 +20113,9 @@ def: "Portion of tissue that is part of the heart tube and will become the bulbu xref: TAO:0002230 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000818 ! vagal neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:25:06Z @@ -20124,10 +20127,10 @@ def: "Portion of tissue that consists of axons of cerebellar granule cells that synonym: "parallel fibers" EXACT PLURAL [] xref: TAO:0002218 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000394 ! molecular layer corpus cerebelli relationship: part_of ZFA:0000913 ! molecular layer valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Melissa Haendel creation_date: 2009-08-13T04:32:51Z @@ -20138,8 +20141,8 @@ namespace: zebrafish_anatomy def: "Portion of presumptive mesoderm fated to become ventral mesoderm. Determined by fate mapping." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002235 is_a: ZFA:0001377 ! presumptive mesoderm -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000014 ! blastula:sphere created_by: Melissa Haendel creation_date: 2009-08-24T11:02:45Z @@ -20150,9 +20153,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue within the otic vesicle that consists of a thin layer of otic epithelium covering a finger-shaped core of acellular matrix." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-090330-11] xref: TAO:0002215 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000051 ! otic vesicle -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Melissa Haendel creation_date: 2009-08-25T10:45:23Z @@ -20163,8 +20166,8 @@ namespace: zebrafish_anatomy def: "Otic vesicle protrusion that is initially ventrally located and then fuses with the lateral protrusion, giving rise to the pillar of the lateral semicircular canal." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-090330-11] xref: TAO:0002216 is_a: ZFA:0001715 ! otic vesicle protrusion -relationship: end ZFS:0000035 ! Larval:Protruding-mouth -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000035 ! larval:protruding-mouth +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Melissa Haendel creation_date: 2009-08-25T10:53:24Z @@ -20175,9 +20178,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue around which the semicircular canals flow." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-383] xref: TAO:0002223 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000431 ! semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Melissa Haendel creation_date: 2009-08-25T10:57:52Z @@ -20189,9 +20192,9 @@ def: "Multi-tissue structure that is part of the heart tube and will become the xref: TAO:0002228 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001721 ! presumptive atrium primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:20:59Z @@ -20204,9 +20207,9 @@ xref: TAO:0002231 xref: ZFA:0002231 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001720 ! presumptive cardiac ventricle primitive heart tube -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-25T12:21:18Z @@ -20217,9 +20220,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac ventricle." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002232 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:23Z @@ -20230,9 +20233,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is part of the primitive heart tube and will become the cardiac atrium." [ZFIN:ZDB-PUB-080218-11] xref: TAO:0002229 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000149 ! primitive heart tube -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Melissa Haendel creation_date: 2009-08-25T01:10:28Z @@ -20243,9 +20246,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the sinus venosus." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002234 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T11:40:57Z @@ -20256,9 +20259,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the atrioventricular canal." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002227 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Melissa Haendel creation_date: 2009-08-31T11:57:36Z @@ -20269,9 +20272,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is part of the heart tube and will become the endocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002233 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Melissa Haendel creation_date: 2009-08-31T01:21:44Z @@ -20285,9 +20288,9 @@ subset: cell_slim xref: CL:0002377 xref: TAO:0002203 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) -relationship: end ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000032 ! pharyngula:high-pec relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Melissa Haendel creation_date: 2009-09-08T02:10:35Z @@ -20299,9 +20302,9 @@ def: "Artery that extends horizontally across the brain midline which is fed by synonym: "BCA" EXACT [] xref: TAO:0005000 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005001 @@ -20314,8 +20317,8 @@ synonym: "PCS" EXACT [] synonym: "posterior communicating segment of the basilar artery" EXACT [] xref: TAO:0005001 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005002 @@ -20325,9 +20328,9 @@ def: "Artery that runs along the ventral keel of the hindbrain. It lies between synonym: "BA" EXACT [] xref: TAO:0005002 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005003 @@ -20338,10 +20341,10 @@ synonym: "branchial basket" RELATED [] synonym: "branchial vasculature" EXACT [] xref: TAO:0005003 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature relationship: part_of ZFA:0001306 ! pharyngeal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005004 @@ -20352,9 +20355,9 @@ synonym: "aortic arches" EXACT PLURAL [] synonym: "branchial aortic arches " EXACT PLURAL [ZFIN:ZDB-PUB-080512-6] xref: TAO:0005004 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005003 ! pharyngeal vasculature -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005005 @@ -20365,9 +20368,9 @@ synonym: "AA1" EXACT [] synonym: "mandibular aortic arch" EXACT [] xref: TAO:0005005 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001612 ! pharyngeal arch 1 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005006 @@ -20378,9 +20381,9 @@ synonym: "AA2" EXACT [] synonym: "hyoid aortic arch" EXACT [] xref: TAO:0005006 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001611 ! pharyngeal arch 2 -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005007 @@ -20390,9 +20393,9 @@ def: "Aortic arch that is part of pharyngeal arch 3. The paired aortic arch 3 ar synonym: "AA3" EXACT [] xref: TAO:0005007 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001606 ! pharyngeal arch 3 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005008 @@ -20402,9 +20405,9 @@ def: "Aortic arch that is part of pharyngeal arch 4. The paired aortic arch 4 ar synonym: "AA4" EXACT [] xref: TAO:0005008 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001607 ! pharyngeal arch 4 -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005009 @@ -20414,9 +20417,9 @@ def: "Aortic arch that is part of pharyngeal arch 5. Aortic arch 5 artery is pai synonym: "AA5" EXACT [] xref: TAO:0005009 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001608 ! pharyngeal arch 5 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005010 @@ -20429,9 +20432,9 @@ synonym: "mid-cerebral vein" EXACT [] synonym: "middle cerebral vein" EXACT [] xref: TAO:0005010 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005011 @@ -20442,8 +20445,8 @@ synonym: "pseudobranchial arteries" EXACT PLURAL [] xref: TAO:0005011 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005012 @@ -20454,10 +20457,10 @@ synonym: "AFA" EXACT [] synonym: "afferent filamental arteries" EXACT PLURAL [] xref: TAO:0005012 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000666 ! filamental artery relationship: part_of ZFA:0000716 ! afferent branchial artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005013 @@ -20467,9 +20470,9 @@ def: "The branch of the afferent branchial artery that continues posterodorsally synonym: "CCB" EXACT [] xref: TAO:0005013 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000716 ! afferent branchial artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005014 @@ -20480,9 +20483,9 @@ synonym: "RCB" EXACT [] synonym: "recurrent branch afferent branchial arteries" EXACT PLURAL [] xref: TAO:0005014 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000716 ! afferent branchial artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005015 @@ -20493,10 +20496,10 @@ synonym: "afferent lamellar arterioles" EXACT PLURAL [] synonym: "AFL" EXACT [] xref: TAO:0005015 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000211 ! gill lamella relationship: part_of ZFA:0005012 ! afferent filamental artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005016 @@ -20506,9 +20509,9 @@ def: "Aortic arch that is part of pharyngeal arch 6. Aortic arch 6 artery is pai synonym: "AA6" EXACT [] xref: TAO:0005016 is_a: ZFA:0005004 ! aortic arch -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001609 ! pharyngeal arch 6 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005017 @@ -20518,9 +20521,9 @@ def: "The vessel between the anterior cerebral vein and the mid cerebral vein." synonym: "PMBC" EXACT [] xref: TAO:0005017 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005018 @@ -20530,10 +20533,10 @@ def: "Artery that exits the gill filament." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "EFA" EXACT [] xref: TAO:0005018 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000202 ! efferent branchial artery relationship: part_of ZFA:0000666 ! filamental artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005019 @@ -20544,10 +20547,10 @@ synonym: "efferent lamellar arterioles" EXACT PLURAL [] synonym: "ELA" EXACT [] xref: TAO:0005019 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000211 ! gill lamella relationship: part_of ZFA:0005018 ! efferent filamental artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005020 @@ -20557,9 +20560,9 @@ def: "Artery that irrigates the forebrain and midbrain." [ZFIN:ZDB-PUB-010205-5] synonym: "CtA" EXACT [] xref: TAO:0005020 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005021 @@ -20569,8 +20572,8 @@ def: "Extend upward from the PCS, branch to provide an arterial feed to the hind synonym: "CCtA" EXACT [] xref: TAO:0005021 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005022 @@ -20582,8 +20585,8 @@ synonym: "ORA" EXACT [] xref: TAO:0005022 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005005 ! aortic arch 1 -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005023 @@ -20592,8 +20595,8 @@ namespace: zebrafish_anatomy def: "System responsible for generating hematopoietic cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005023 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005024 @@ -20602,9 +20605,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around trunk." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005024 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001115 ! trunk -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005025 @@ -20616,11 +20619,11 @@ synonym: "DLAV" EXACT [] xref: TAO:0005025 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0001285 ! intersegmental vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001073 ! axial vasculature relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005026 @@ -20631,9 +20634,9 @@ synonym: "lateral head vein" EXACT [] synonym: "PHS" EXACT [] xref: TAO:0005026 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005027 @@ -20644,9 +20647,9 @@ synonym: "caudal cerebral vein" EXACT [] synonym: "PCeV" EXACT [] xref: TAO:0005027 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005028 @@ -20661,10 +20664,10 @@ synonym: "dorsal aorta - posterior cardinal vein joint" EXACT [ZFIN:ZDB-PUB-0612 synonym: "DP joint" EXACT [] xref: TAO:0005028 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000014 ! dorsal aorta relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0005029 @@ -20676,9 +20679,9 @@ synonym: "RBI" EXACT [] xref: TAO:0005029 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005041 ! anterior lateral plate mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0005030 @@ -20689,9 +20692,9 @@ synonym: "DCV" EXACT [] xref: TAO:0005030 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005031 @@ -20701,9 +20704,9 @@ def: "Vessel that connects to the primitive hindbrain channel and the basilar ar synonym: "DLV" EXACT [] xref: TAO:0005031 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005032 @@ -20713,8 +20716,8 @@ def: "Vein that connects to the hyaloid vein that drains the eye. External to e synonym: "OV" EXACT [] xref: TAO:0005032 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005033 @@ -20724,8 +20727,8 @@ def: "Is an pair of arteries that form from the intersegmental vessels at the le synonym: "vertebral arteries" EXACT PLURAL [] xref: TAO:0005033 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005034 @@ -20737,10 +20740,10 @@ xref: TAO:0005034 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0000477 ! posterior cardinal vein relationship: develops_from ZFA:0001057 ! intersegmental vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature relationship: part_of ZFA:0005037 ! post-vent vasculature -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005035 @@ -20751,9 +20754,9 @@ synonym: "SIV" EXACT [] synonym: "vitelline vein" EXACT [] xref: TAO:0005035 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005036 @@ -20763,8 +20766,8 @@ def: "A continuation of the anterior mesenteric artery, which branches out from synonym: "SIA" EXACT [] xref: TAO:0005036 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005037 @@ -20774,9 +20777,9 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th synonym: "tail vasculature" RELATED [] xref: TAO:0005037 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001117 ! post-vent region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005038 @@ -20786,9 +20789,9 @@ synonym: "" RELATED [] synonym: "supraintestinal veins" EXACT PLURAL [] xref: TAO:0005038 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005039 @@ -20797,9 +20800,9 @@ namespace: zebrafish_anatomy synonym: "ALM" EXACT [] xref: TAO:0005039 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001065 ! lateral mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005040 @@ -20808,9 +20811,9 @@ namespace: zebrafish_anatomy synonym: "PLM" EXACT [] xref: TAO:0005040 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001065 ! lateral mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005041 @@ -20819,9 +20822,9 @@ namespace: zebrafish_anatomy synonym: "ALPM" EXACT [] xref: TAO:0005041 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000121 ! lateral plate mesoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0005042 @@ -20830,9 +20833,9 @@ namespace: zebrafish_anatomy synonym: "PLPM" EXACT [] xref: TAO:0005042 is_a: ZFA:0000041 ! mesoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000121 ! lateral plate mesoderm -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0005043 @@ -20843,9 +20846,9 @@ synonym: "f-nevi" EXACT [] synonym: "naevus" EXACT [] xref: TAO:0005043 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001119 ! dermis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005044 @@ -20856,8 +20859,8 @@ synonym: "optic arteries" EXACT PLURAL [] xref: TAO:0005044 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005045 @@ -20867,9 +20870,9 @@ def: "Artery that is internal to the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917, synonym: "hyaloid arteries" EXACT PLURAL [] xref: TAO:0005045 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005046 ! hyaloid vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005046 @@ -20880,8 +20883,8 @@ synonym: "hyaloid vasculature" RELATED [] synonym: "hyaloid vessels" EXACT PLURAL [] xref: TAO:0005046 is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005047 @@ -20891,9 +20894,9 @@ def: "Vein internal to the eye." [ZFIN:ZDB-PUB-010205-5] synonym: "hyaloid veins" EXACT PLURAL [] xref: TAO:0005047 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005046 ! hyaloid vessel -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0005048 @@ -20903,8 +20906,8 @@ def: "Vessel that branches from cranial division of the internal carotid artery, synonym: "PPrA" EXACT [] xref: TAO:0005048 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005049 @@ -20915,8 +20918,8 @@ synonym: "PrA" EXACT [] xref: TAO:0005049 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0005048 ! primitive prosencephalic artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005050 @@ -20926,8 +20929,8 @@ def: "The PLA branches ventrally from the CrDI. It extends rostrally along the synonym: "PLA" EXACT [] xref: TAO:0005050 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005051 @@ -20938,8 +20941,8 @@ synonym: "CMV" EXACT [] synonym: "communicating vessels" EXACT [] xref: TAO:0005051 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005052 @@ -20950,8 +20953,8 @@ synonym: "AMCtA" EXACT [] synonym: "rostral mesencephalic central artery" EXACT [] xref: TAO:0005052 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005053 @@ -20961,8 +20964,8 @@ def: "Artery that branches off the cranial division of the internal carotid arte synonym: "NCA" EXACT [] xref: TAO:0005053 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005054 @@ -20975,8 +20978,8 @@ is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel relationship: develops_from ZFA:0005082 ! dorsal branch nasal ciliary artery relationship: develops_from ZFA:0005083 ! ventral branch nasal ciliary artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005055 @@ -20986,9 +20989,9 @@ def: "Drains the PLA loop proceeds straight caudally along the cranial midline j synonym: "MPLV" EXACT [] xref: TAO:0005055 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005056 @@ -20998,9 +21001,9 @@ def: "Vein that drains the median palatocerebral vein into the optic vein." [GOC synonym: "PLV" EXACT [] xref: TAO:0005056 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005057 @@ -21011,9 +21014,9 @@ comment: No evidence of epicardium layer in cardiac atrium in Hu et al 2001. xref: TAO:0005057 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005808 ! proepicardial cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005058 @@ -21022,10 +21025,10 @@ namespace: zebrafish_anatomy def: "The external layer of the ventricle bounding the ventricular myocardium. It is formed by a single layer of mesothelial cells supported by a basal lamina, and imbricated with collagen, fibroblasts, and vascular structures in the subepicardial space." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] xref: TAO:0005058 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0005057 ! epicardium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005059 @@ -21036,9 +21039,9 @@ comment: Cardiac conduction may occur in the trabecular layer via trabecular fib synonym: "trabecula" RELATED [] xref: TAO:0005059 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005060 @@ -21046,10 +21049,10 @@ name: trabecular layer of ventricle namespace: zebrafish_anatomy xref: TAO:0005060 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005059 ! trabecular layer relationship: part_of ZFA:0005061 ! ventricular myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005061 @@ -21058,10 +21061,10 @@ namespace: zebrafish_anatomy def: "Muscular layer of the cardiac ventricle composed of a compact myocardial layer surrounding the trabecular layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] xref: TAO:0005061 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0001319 ! myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005062 @@ -21070,9 +21073,9 @@ namespace: zebrafish_anatomy def: "The outer layer the ventricular myocardium, muscle fibers are arranged in a compact form and involved the entire ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005062 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005061 ! ventricular myocardium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005063 @@ -21083,9 +21086,9 @@ synonym: "cardiac pacemaker" EXACT [] synonym: "central conduction system" EXACT [] xref: TAO:0005063 is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005064 @@ -21095,10 +21098,10 @@ def: "The atrioventricular valve has four distinct leaflets oriented anterior, p xref: TAO:0005064 is_a: ZFA:0005065 ! heart valve relationship: develops_from ZFA:0001317 ! endocardial cushion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005065 @@ -21108,9 +21111,9 @@ def: "Multi-tissue structure composed of leaflets that separate parts of the hea synonym: "heart valves" EXACT PLURAL [] xref: TAO:0005065 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005066 @@ -21120,9 +21123,9 @@ def: "The portion of tissue that is the outer layer of the bulbus arteriosus. It synonym: "bulbus arteriosus externa" EXACT [] xref: TAO:0005066 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005067 @@ -21132,9 +21135,9 @@ def: "Composed of 7-10 layers of helically arranged smooth muscle cells surround synonym: "bulbus arteriosus media" EXACT [] xref: TAO:0005067 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005068 @@ -21144,9 +21147,9 @@ def: "Composed of subendothelium with longitudinally oriented collagen, reticula synonym: "bulbus arteriosus intima" EXACT [] xref: TAO:0005068 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000173 ! bulbus arteriosus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005069 @@ -21156,10 +21159,10 @@ def: "Portion of tissue containing 3 and 30 cells in dorsal right quadrant of xref: TAO:0005069 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005601 ! sinoatrial ring -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005070 @@ -21171,10 +21174,10 @@ synonym: "downstream pacemaker" RELATED [] xref: TAO:0005070 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005073 ! atrioventricular ring -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005071 @@ -21195,10 +21198,10 @@ namespace: zebrafish_anatomy def: "A portion of endocardial tissue that is part of the atrioventricular ring." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005072 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001320 ! endocardium relationship: part_of ZFA:0005073 ! atrioventricular ring -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005073 @@ -21208,10 +21211,10 @@ def: "A ring of conduction tissue that forms in the atrioventricular canal." [ZF synonym: "AV ring" EXACT [] xref: TAO:0005073 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001315 ! atrioventricular canal relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005074 @@ -21220,8 +21223,8 @@ namespace: zebrafish_anatomy def: "Cardiac conduction system, characterized by slow impulse propagation and prolonged refractory periods." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060227-6] xref: TAO:0005074 is_a: ZFA:0005063 ! cardiac conduction system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005075 @@ -21232,9 +21235,9 @@ synonym: "distal conduction system " RELATED [] synonym: "ventricular fast conduction system" EXACT [ZFIN:ZDB-PUB-120927-27] xref: TAO:0005075 is_a: ZFA:0005063 ! cardiac conduction system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000009 ! cardiac ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005076 @@ -21243,9 +21246,9 @@ namespace: zebrafish_anatomy def: "Is a portion of tissue that will develop into vasculature." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005076 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0005077 @@ -21254,8 +21257,8 @@ namespace: zebrafish_anatomy def: "The primordial vasculature that will develop into blood vessels by the process of tubulogenesis. The vascular cord is composed of angioblast or vascular endothelial cells in a solid linear mass called a cord. The cord then undergoes tubulogenesis to form the lumen of the vessels." [ZFIN:ZDB-PUB-040416-1] xref: TAO:0005077 is_a: ZFA:0005076 ! primordial vasculature -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0005078 @@ -21265,8 +21268,8 @@ def: "Projects rostrally and dorsally from the AMCtA to irrigate the midportion synonym: "MMCtA" EXACT [] xref: TAO:0005078 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005079 @@ -21277,8 +21280,8 @@ synonym: "caudal mesencephalic central artery" EXACT [] synonym: "PMCtA" EXACT [] xref: TAO:0005079 is_a: ZFA:0005020 ! central artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005080 @@ -21289,8 +21292,8 @@ synonym: "AMA" EXACT [] synonym: "rostral mesenteric artery" EXACT [] xref: TAO:0005080 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005081 @@ -21303,9 +21306,9 @@ synonym: "ICA" EXACT [] xref: TAO:0005081 is_a: ZFA:0000005 ! artery relationship: develops_from ZFA:0001053 ! primitive internal carotid artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000097 ! carotid artery -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005082 @@ -21316,9 +21319,9 @@ synonym: "dorsal branch nasal ciliary arteries" EXACT PLURAL [] xref: TAO:0005082 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005083 @@ -21327,9 +21330,9 @@ namespace: zebrafish_anatomy xref: TAO:0005083 is_a: ZFA:0000005 ! artery is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005053 ! nasal ciliary artery -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005084 @@ -21339,8 +21342,8 @@ def: "These arteries branch dorsally from both sides of the posterior communicat synonym: "metencephalic arteries" EXACT PLURAL [] xref: TAO:0005084 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005085 @@ -21350,8 +21353,8 @@ def: "The nasal arteries start at the internal carotid artery and travel rostral synonym: "NA" EXACT [] xref: TAO:0005085 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005086 @@ -21362,9 +21365,9 @@ synonym: "PA" EXACT [] synonym: "subclavian artery" EXACT [] xref: TAO:0005086 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005301 ! pectoral fin blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005087 @@ -21374,9 +21377,9 @@ def: "Vein from the pectoral fin that drains into the ACV just cranial to the AC synonym: "PV" EXACT [] xref: TAO:0005087 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005301 ! pectoral fin blood vessel -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005088 @@ -21387,8 +21390,8 @@ synonym: "caudal mesenteric artery" EXACT [] synonym: "PMA" EXACT [] xref: TAO:0005088 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005089 @@ -21398,8 +21401,8 @@ def: "An elaborate set of vessels that branch off caudally from the anterior mes synonym: "SBA" EXACT [] xref: TAO:0005089 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005090 @@ -21411,9 +21414,9 @@ synonym: "primary hepatic portal vein" RELATED [] xref: TAO:0005090 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005035 ! subintestinal vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005091 @@ -21424,10 +21427,10 @@ synonym: "hepatic sinusoids" EXACT PLURAL [] xref: TAO:0005091 is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0005035 ! subintestinal vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver relationship: part_of ZFA:0005024 ! trunk vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005092 @@ -21437,8 +21440,8 @@ def: "Paired veins that sprout from the dorsal midline junction and dive ventral synonym: "MsV" EXACT [] xref: TAO:0005092 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005093 @@ -21448,9 +21451,9 @@ def: "Vein that is fed by the nasal artery. It rises dorsally around the fron synonym: "NV" EXACT [] xref: TAO:0005093 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005297 ! cranial blood vessel -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005094 @@ -21463,9 +21466,9 @@ synonym: "CVP" EXACT [] xref: TAO:0005094 is_a: ZFA:0005933 ! mature plexus is_a: ZFA:0007057 ! ocular blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 [Term] id: ZFA:0005095 @@ -21474,9 +21477,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005095 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000108 ! fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005096 @@ -21485,9 +21488,9 @@ namespace: zebrafish_anatomy def: "Vasculature of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005096 is_a: ZFA:0005095 ! fin vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005097 @@ -21496,9 +21499,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005097 is_a: ZFA:0005095 ! fin vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005098 @@ -21508,9 +21511,9 @@ def: "Artery that is positioned in the intraray mesenchyme between the hemirays synonym: "central ray arteries" EXACT PLURAL [] xref: TAO:0005098 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005299 ! fin blood vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005099 @@ -21520,9 +21523,9 @@ def: "Vein that flanks and is just lateral to the fin ray, in the interray mesen synonym: "ray veins" EXACT PLURAL [] xref: TAO:0005099 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005299 ! fin blood vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005100 @@ -21532,8 +21535,8 @@ def: "Vessels that travel between artery and veins or vein and vein in a single synonym: "intervessel comisures" EXACT PLURAL [] xref: TAO:0005100 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005101 @@ -21543,8 +21546,8 @@ def: "Vessels that travel between veins in adjacent rays." [GOC:cvs, ORCiD:0000- synonym: "interray vessels" EXACT PLURAL [] xref: TAO:0005101 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005102 @@ -21553,8 +21556,8 @@ namespace: zebrafish_anatomy def: "Stripe of tissue fated to become the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005102 is_a: ZFA:0001116 ! presumptive structure -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005103 @@ -21563,8 +21566,8 @@ namespace: zebrafish_anatomy def: "Stripe of tissue on the ventral side of the fish, fated to become the ventral region of the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005103 is_a: ZFA:0005102 ! presumptive median fin fold -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005104 @@ -21573,8 +21576,8 @@ namespace: zebrafish_anatomy def: "Stripe of tissue on the dorsal side of the fish, fated to become the dorsal region of the median fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005104 is_a: ZFA:0005102 ! presumptive median fin fold -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005105 @@ -21585,9 +21588,9 @@ synonym: "lymph vessel" RELATED [] synonym: "lymph vessels" EXACT PLURAL [] xref: TAO:0005105 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000385 ! lymphatic system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0005106 @@ -21596,8 +21599,8 @@ namespace: zebrafish_anatomy synonym: "LLL" EXACT [] xref: TAO:0005106 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005107 @@ -21606,8 +21609,8 @@ namespace: zebrafish_anatomy synonym: "PL" EXACT [] xref: TAO:0005107 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005108 @@ -21617,9 +21620,9 @@ comment: Probably a deep lymph vessel. This vessel was shown in ZDB-PUB-060616- synonym: "FL" EXACT [] xref: TAO:0005108 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005109 @@ -21630,9 +21633,9 @@ synonym: "JL" EXACT [] synonym: "JLV" EXACT [] xref: TAO:0005109 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005110 @@ -21642,8 +21645,8 @@ def: "The thoracic duct is the first perfused lymphatic, located between the dor xref: TAO:0005110 is_a: ZFA:0005296 ! axial lymph vessel relationship: develops_from ZFA:0005605 ! lymphangioblast cord -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0005111 @@ -21653,20 +21656,20 @@ def: "Tract that originates in the telencephalon lies medial to the lateral fore synonym: "medial forebrain bundles" EXACT PLURAL [] xref: TAO:0005111 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005112 name: dorsal lateral line namespace: zebrafish_anatomy -def: "One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880] +def: "One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for lateral line by T. Whitfield.)" [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-070907-34] synonym: "dorsal lateral lines" EXACT PLURAL [] xref: TAO:0005112 is_a: ZFA:0001469 ! lateral line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001471 ! posterior lateral line system -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005113 @@ -21676,9 +21679,9 @@ def: "Neuromast that is part of the dorsal lateral line. (Also see Anatomical At synonym: "neuromast dorsal" EXACT [] xref: TAO:0005113 is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005112 ! dorsal lateral line -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0005114 @@ -21687,8 +21690,8 @@ namespace: zebrafish_anatomy def: "The middle lateral line system develops from cranial ectodermal placodes, that give rise to both the neuromasts and the middle lateral line sensory nerves that innervate the neuromasts. The middle lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the body that are innervated by several lateral line nerves, which project to the hindbrain. The middle lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005114 is_a: ZFA:0000034 ! lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005115 @@ -21700,8 +21703,8 @@ synonym: "primI" EXACT [] xref: TAO:0005115 is_a: ZFA:0001157 ! posterior lateral line primordium relationship: develops_from ZFA:0001156 ! posterior lateral line placode -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0005116 @@ -21711,8 +21714,8 @@ def: "Second lateral line primordium. These primordia move at 0.2 somites/hour synonym: "secondary posterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005116 is_a: ZFA:0001157 ! posterior lateral line primordium -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0005117 @@ -21722,9 +21725,9 @@ def: "A migrating group of cells originating from an anterior lateral line placo synonym: "anterior lateral line primordia" EXACT PLURAL [] xref: TAO:0005117 is_a: ZFA:0000228 ! lateral line primordium -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001468 ! anterior lateral line system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0005118 @@ -21734,9 +21737,9 @@ def: "A migrating group of cells originating from the middle lateral line placod synonym: "middle lateral line primordia" EXACT PLURAL [] xref: TAO:0005118 is_a: ZFA:0000228 ! lateral line primordium -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 [Term] id: ZFA:0005119 @@ -21746,8 +21749,8 @@ def: "A surface structure that will eventually grow to form a barbel. The prim synonym: "barbel primordia" EXACT PLURAL [] xref: TAO:0005119 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000042 ! juvenile:days 30-44 [Term] id: ZFA:0005120 @@ -21756,8 +21759,8 @@ namespace: zebrafish_anatomy def: "The serous membrane that lines the peritoneal cavity. The peritoneum secretes serous fluid which allows free movement of the peritoneum and the intraperitoneal organs." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005120 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005121 @@ -21767,9 +21770,9 @@ def: "Dorsolateral placode that gives rise to the middle lateral line." [GOC:cvs synonym: "middle lateral line placodes" EXACT PLURAL [] xref: TAO:0005121 is_a: ZFA:0001310 ! dorsolateral placode -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0005114 ! middle lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005122 @@ -21778,9 +21781,9 @@ namespace: zebrafish_anatomy def: "Dorsal region of the axial hypoblast." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005122 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001378 ! axial hypoblast -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0005123 @@ -21789,9 +21792,9 @@ namespace: zebrafish_anatomy def: "Epithelium lining the lumen of the gut." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005123 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005124 @@ -21802,10 +21805,10 @@ synonym: "intestine epithelium" EXACT [] synonym: "villous epithelium" EXACT [ZFIN:ZDB-PUB-090217-11] xref: TAO:0005124 is_a: ZFA:0001496 ! simple columnar epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005123 ! gut epithelium relationship: part_of ZFA:0005660 ! intestinal mucosa -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005125 @@ -21815,9 +21818,9 @@ def: "The entire digestive tract is lined by well developed villi, which are lon synonym: "intestinal villi" EXACT PLURAL [] xref: TAO:0005125 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0005126 @@ -21826,9 +21829,9 @@ namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the intestinal bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005126 is_a: ZFA:0005124 ! intestinal epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001076 ! intestinal bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005127 @@ -21837,9 +21840,9 @@ namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the mid intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005127 is_a: ZFA:0005124 ! intestinal epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001323 ! mid intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005128 @@ -21848,9 +21851,9 @@ namespace: zebrafish_anatomy def: "Intestinal epithelium which lines the lumen of the posterior intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005128 is_a: ZFA:0005124 ! intestinal epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000706 ! posterior intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005129 @@ -21859,9 +21862,9 @@ namespace: zebrafish_anatomy def: "A double layer composed of peritoneum that attaches the visceral organs to the body wall." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005129 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005120 ! peritoneum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005130 @@ -21870,8 +21873,8 @@ namespace: zebrafish_anatomy def: "The mesentery that originates from the dorsal side of the peritoneal cavity." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005130 is_a: ZFA:0005129 ! mesentery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005131 @@ -21880,22 +21883,22 @@ namespace: zebrafish_anatomy def: "The peritoneum that lines the walls of the peritoneal cavity." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005131 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005120 ! peritoneum relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005132 name: visceral peritoneum namespace: zebrafish_anatomy def: "The part of peritoneum that is a serous membrane covers the external surfaces of most abdominal organs." [GOC:cvs, ORCiD:0000-0002-2244-7917] -synonym: "tunica serosa" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] +synonym: "tunica serosa" RELATED [http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0005132 is_a: ZFA:0005425 ! serous membrane -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005120 ! peritoneum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005133 @@ -21904,8 +21907,8 @@ namespace: zebrafish_anatomy def: "The mesentery that originates from the ventral side of the peritoneal cavity." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005133 is_a: ZFA:0005129 ! mesentery -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005134 @@ -21916,8 +21919,8 @@ synonym: "dental epithelia" EXACT PLURAL [] xref: TAO:0005134 is_a: ZFA:0001486 ! epithelium relationship: develops_from ZFA:0001174 ! pharyngeal epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005135 @@ -21928,8 +21931,8 @@ synonym: "pharyngeal tooth epithelium" EXACT [] synonym: "tooth epithelium" EXACT [] xref: TAO:0005135 is_a: ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005136 @@ -21940,9 +21943,9 @@ synonym: "ide" EXACT [] synonym: "inner enamel epithelium" EXACT [] xref: TAO:0005136 is_a: ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005137 @@ -21952,9 +21955,9 @@ def: "Outer layer of the dental organ." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "ode" EXACT [] xref: TAO:0005137 is_a: ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005138 @@ -21965,8 +21968,8 @@ synonym: "enamel organ" EXACT [] xref: TAO:0005138 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001153 ! tooth placode -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005139 @@ -21975,9 +21978,9 @@ namespace: zebrafish_anatomy def: "Mesenchyme enclosed by dental organ." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005139 is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005140 @@ -21989,8 +21992,8 @@ synonym: "tooth mesenchyme" EXACT [] xref: TAO:0005140 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005139 ! dental mesenchyme -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005141 @@ -22000,9 +22003,9 @@ def: "Material in the center of the dentine of the mature tooth. In secondary t xref: TAO:0005141 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005140 ! dental papilla -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005142 @@ -22012,9 +22015,9 @@ def: "A dentine-like hypermineralized substance that covers the zebrafish tooth synonym: "enamel" RELATED [] xref: TAO:0005142 is_a: ZFA:0005623 ! odontoid tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005143 @@ -22024,9 +22027,9 @@ def: "Mineralized collagen containing substance that forms the tooth structure. synonym: "dentin " EXACT [] xref: TAO:0005143 is_a: ZFA:0005623 ! odontoid tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005144 @@ -22036,9 +22039,9 @@ def: "Nerve that is a branch of cranial nerve VIII and innervates the cristae am synonym: "ampullary nerves" EXACT PLURAL [] xref: TAO:0005144 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000247 ! cranial nerve VIII -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005145 @@ -22048,9 +22051,9 @@ def: "Portion of tissue composed of contractile fibers." [GOC:cvs, ORCiD:0000-00 synonym: "muscles" EXACT PLURAL [] xref: TAO:0005145 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000548 ! musculature system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005146 @@ -22059,9 +22062,9 @@ namespace: zebrafish_anatomy def: "An area of medulla oblongata, outside the blood-brain barrier. The apical terminals of the neurons are, in a strategic location either to monitor the chemical constitution of the plasma or to release neurogenic substances into the general circulation." [ZFIN:ZDB-PUB-970602-2] xref: TAO:0005146 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000545 ! medulla oblongata -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005147 @@ -22071,8 +22074,8 @@ def: "A portion of tissue that is regrowing after damage or amputation." [GOC:cv synonym: "regenerating tissues" EXACT PLURAL [] xref: TAO:0005147 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005148 @@ -22082,9 +22085,9 @@ def: "Part of the regeneration epithelium closest to the fin." [GOC:cvs, ORCiD:0 synonym: "apical epidermal caps" EXACT PLURAL [] xref: TAO:0005148 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001389 ! regeneration epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005149 @@ -22094,9 +22097,9 @@ def: "Part of regeneration epithelium at the tip of the fin." [GOC:cvs, ORCiD:00 synonym: "distal epidermal caps" EXACT PLURAL [] xref: TAO:0005149 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001389 ! regeneration epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005150 @@ -22106,9 +22109,9 @@ def: "Layer of the wound epidermis that surrounds the blastema." [GOC:cvs, ORCiD synonym: "basal wound epidermis" EXACT [] xref: TAO:0005150 is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001389 ! regeneration epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0005151 @@ -22118,8 +22121,8 @@ def: "Iridescent iridophore containing gold reflecting platelets." [GOC:cvs, ORC subset: cell_slim xref: TAO:0005151 is_a: ZFA:0009199 ! iridophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2009-03-12T12:34:16Z @@ -22131,8 +22134,8 @@ def: "Iridescent iridophore containing silver reflecting platelets." [GOC:cvs, O subset: cell_slim xref: TAO:0005152 is_a: ZFA:0009199 ! iridophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2009-03-12T12:48:18Z @@ -22145,8 +22148,8 @@ synonym: "diarthrodial joints" RELATED [] synonym: "diarthroses" EXACT [] xref: TAO:0005153 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:31:49Z @@ -22157,9 +22160,9 @@ namespace: zebrafish_anatomy def: "Portion of organism substance that is a clear fluid that occupies the space in synovial joints." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005154 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005153 ! synovial joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:42:07Z @@ -22171,8 +22174,8 @@ def: "Is a joint where the ends of two bones are connected by cartilage." [GOC:c synonym: "synchondrosis" EXACT [] xref: TAO:0005155 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:52:52Z @@ -22185,8 +22188,8 @@ synonym: "syndesmoses" EXACT PLURAL [] synonym: "syndesmosis" EXACT [] xref: TAO:0005156 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-03-12T01:54:12Z @@ -22198,9 +22201,9 @@ def: "Tela chorioidea that lines the tectal ventricle." [GOC:cvs, ORCiD:0000-000 synonym: "tela choroidea tectal ventricle" EXACT [] xref: TAO:0005157 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000159 ! tectal ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T01:30:05Z @@ -22212,9 +22215,9 @@ def: "Tela chorioidea that lines the fourth ventricle." [GOC:cvs, ORCiD:0000-000 synonym: "tela choroidea fourth ventricle" EXACT [] xref: TAO:0005158 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000110 ! fourth ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T01:40:34Z @@ -22226,9 +22229,9 @@ def: "Tela chorioidea that lines the third ventricle." [GOC:cvs, ORCiD:0000-0002 synonym: "tela choroidea third ventricle" EXACT [] xref: TAO:0005159 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T02:04:56Z @@ -22240,9 +22243,9 @@ def: "Tela chorioidea that lines the telencephalic ventricle." [GOC:cvs, ORCiD:0 synonym: "tela choroidea telencephalic ventricle" EXACT [] xref: TAO:0005160 is_a: ZFA:0000447 ! tela chorioidea -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000696 ! telencephalic ventricle -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2009-04-02T02:20:33Z @@ -22253,9 +22256,9 @@ namespace: zebrafish_anatomy def: "Artery that supplies blood to the liver." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005161 is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-04-20T03:43:46Z @@ -22266,9 +22269,9 @@ namespace: zebrafish_anatomy def: "Ducts that transport enzymes between organs in the digestive system." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005162 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Ceri creation_date: 2009-04-20T04:51:36Z @@ -22280,9 +22283,9 @@ def: "Intercellular space surrounded by the basal surface of the hepatocytes tha comment: Should be located in rather then part_of when we get the appropriate relation. xref: TAO:0005163 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:33:42Z @@ -22293,9 +22296,9 @@ namespace: zebrafish_anatomy def: "Digestive system duct that collects bile from the canaliculus and transports bile through the liver." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005164 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:39:12Z @@ -22306,9 +22309,9 @@ namespace: zebrafish_anatomy def: "Digestive system duct that collects bile from the hepatic bile duct and the cystic duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005165 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001100 ! hepatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:43:23Z @@ -22319,9 +22322,9 @@ namespace: zebrafish_anatomy def: "Duct that connects the gall bladder and the common bile duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005166 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000036 ! liver and biliary system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:56:39Z @@ -22335,9 +22338,9 @@ synonym: "papilla duodeni major" RELATED [] synonym: "papilla Vateri" EXACT [] xref: TAO:0005167 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-20T05:59:27Z @@ -22348,9 +22351,9 @@ namespace: zebrafish_anatomy def: "Vein that is central to a lobule in the liver." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005168 is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-04-21T02:46:13Z @@ -22361,9 +22364,9 @@ namespace: zebrafish_anatomy def: "Duct that collects bile from the bile ductules and connects to the extrahepatic bile duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005169 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:19:40Z @@ -22374,9 +22377,9 @@ namespace: zebrafish_anatomy def: "Bile duct that collects from the intrahepatic ducts and feeds into the common bile duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005170 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001100 ! hepatic duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T04:26:36Z @@ -22387,8 +22390,8 @@ namespace: zebrafish_anatomy def: "A tube shaped multi-tissue structure lined with epithelial cells that collects secretions and routes them to their destination." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005171 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-04-27T04:45:59Z @@ -22401,9 +22404,9 @@ synonym: "1st lobe" EXACT [] synonym: "first lobe" EXACT [] xref: TAO:0005172 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2009-04-27T05:51:33Z @@ -22417,9 +22420,9 @@ synonym: "gall bladder lobe" EXACT [] synonym: "second lobe" EXACT [] xref: TAO:0005173 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-04-27T05:59:16Z @@ -22432,9 +22435,9 @@ synonym: "3rd lobe" EXACT [] synonym: "third lobe" EXACT [] xref: TAO:0005174 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2009-04-27T06:04:51Z @@ -22448,8 +22451,8 @@ subset: cell_slim synonym: "primary commissural interneuron" EXACT [] xref: TAO:0005175 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T01:41:54Z @@ -22463,8 +22466,8 @@ subset: cell_slim synonym: "secondary commissural interneuron" EXACT [] xref: TAO:0005176 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:07:49Z @@ -22479,8 +22482,8 @@ synonym: "V2b interneuron" RELATED [] synonym: "ventral longitudinal interneuron" EXACT [] xref: TAO:0005177 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:14:18Z @@ -22494,8 +22497,8 @@ subset: cell_slim synonym: "dorsal longitudinal interneuron" EXACT [] xref: TAO:0005178 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T02:21:58Z @@ -22509,8 +22512,8 @@ subset: cell_slim synonym: "middle primary motoneuron" EXACT [] xref: TAO:0005179 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:02:28Z @@ -22524,8 +22527,8 @@ subset: cell_slim synonym: "rostral primary motoneuron" EXACT [] xref: TAO:0005180 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:05:40Z @@ -22539,8 +22542,8 @@ subset: cell_slim synonym: "variable primary motoneuron" EXACT [] xref: TAO:0005181 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-06-18T04:38:21Z @@ -22555,9 +22558,9 @@ synonym: "middle dorsal 2 ipsilateral interneuron " EXACT [] xref: TAO:0005183 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-18T05:05:22Z @@ -22572,9 +22575,9 @@ synonym: "middle dorsal 2 contralateral llf interneuron " EXACT [] xref: TAO:0005184 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-18T05:16:33Z @@ -22589,9 +22592,9 @@ synonym: "middle dorsal 2 contralateral mlf interneuron " EXACT [] xref: TAO:0005185 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-18T05:18:53Z @@ -22605,8 +22608,8 @@ subset: cell_slim synonym: "bifurcate commissural interneuron" EXACT [] xref: TAO:0005186 is_a: ZFA:0005231 ! bifurcate interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T11:38:16Z @@ -22620,9 +22623,9 @@ synonym: "middle medial interneuron " EXACT [] xref: TAO:0005187 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T12:31:49Z @@ -22636,9 +22639,9 @@ synonym: "middle rostral 1 interneuron " EXACT [] xref: TAO:0005188 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T12:33:39Z @@ -22652,9 +22655,9 @@ synonym: "middle rostral 2 interneuron " EXACT [] xref: TAO:0005189 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T12:40:02Z @@ -22668,9 +22671,9 @@ synonym: "middle ventral 1 neuron " EXACT [] xref: TAO:0005190 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T01:10:53Z @@ -22684,9 +22687,9 @@ synonym: "middle ventral 2 neuron " EXACT [] xref: TAO:0005191 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000823 ! rhombomere 5 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T01:15:56Z @@ -22700,9 +22703,9 @@ synonym: "rostral intermediate 2 caudal interneuron " EXACT [] xref: TAO:0005192 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T02:39:18Z @@ -22716,9 +22719,9 @@ synonym: "rostral intermediate 2 rostral interneuron " EXACT [] xref: TAO:0005193 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T03:08:46Z @@ -22733,9 +22736,9 @@ synonym: "rostral lateral 1 interneuron " EXACT [] xref: TAO:0005194 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-23T03:22:51Z @@ -22750,9 +22753,9 @@ synonym: "middle dorsal 3 contralateral llf interneuron " EXACT [] xref: TAO:0005195 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-22T05:10:40Z @@ -22767,9 +22770,9 @@ synonym: "middle dorsal 3 contralateral mlf interneuron " EXACT [] xref: TAO:0005196 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-22T05:13:02Z @@ -22784,9 +22787,9 @@ synonym: "middle dorsal 3 ipsilateral interneuron " EXACT [] xref: TAO:0005197 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000069 ! rhombomere 6 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-22T05:15:04Z @@ -22800,9 +22803,9 @@ synonym: "rostral lateral 2 interneuron " EXACT [] xref: TAO:0005198 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T04:33:20Z @@ -22815,9 +22818,9 @@ subset: cell_slim synonym: "rostral lateral 2 rostral interneuron " EXACT [] xref: TAO:0005199 is_a: ZFA:0005198 ! RoL2 -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T04:48:39Z @@ -22830,9 +22833,9 @@ subset: cell_slim synonym: "rostral lateral 2 caudal interneuron " EXACT [] xref: TAO:0005200 is_a: ZFA:0005198 ! RoL2 -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T04:49:28Z @@ -22846,9 +22849,9 @@ synonym: "rostral lateral 3 interneuron " EXACT [] xref: TAO:0005201 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T05:06:36Z @@ -22862,9 +22865,9 @@ synonym: "rostral medial 1 caudal interneuron " EXACT [] xref: TAO:0005202 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T05:08:26Z @@ -22878,9 +22881,9 @@ synonym: "rostral medial 1 rostral interneuron " EXACT [] xref: TAO:0005203 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001031 ! rhombomere 1 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-26T05:09:50Z @@ -22893,9 +22896,9 @@ subset: cell_slim synonym: "rostral ventral 3 interneuron " EXACT [] is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:14:08Z @@ -22909,9 +22912,9 @@ synonym: "rostral medial 2 lateral interneuron " EXACT [] xref: TAO:0005205 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:43:42Z @@ -22925,9 +22928,9 @@ synonym: "rostral medial 2 medial interneuron " EXACT [] xref: TAO:0005206 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000822 ! rhombomere 2 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:45:01Z @@ -22941,9 +22944,9 @@ synonym: "rostral medial 3 lateral interneuron " EXACT [] xref: TAO:0005207 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:46:19Z @@ -22957,9 +22960,9 @@ synonym: "rostral medial 3 medial interneuron " RELATED [] xref: TAO:0005208 is_a: ZFA:0005209 ! hindbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-06-29T02:52:04Z @@ -22971,9 +22974,9 @@ def: "Is a CNS interneuron that is part of the hindbrain." [GOC:cvs, ORCiD:0000- subset: cell_slim xref: TAO:0005209 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T10:21:27Z @@ -22985,8 +22988,8 @@ def: "CNS interneurons located in the midbrain." [GOC:cvs, ORCiD:0000-0002-2244- subset: cell_slim xref: TAO:0005210 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T11:14:28Z @@ -22999,9 +23002,9 @@ subset: cell_slim synonym: "mesencephalon lateral interneuron" EXACT [] xref: TAO:0005211 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T12:35:19Z @@ -23015,9 +23018,9 @@ synonym: "mesencephalon medial interneuron" EXACT [] xref: TAO:0005212 is_a: ZFA:0005210 ! midbrain interneuron is_a: ZFA:0005865 ! reticulospinal neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T01:05:12Z @@ -23030,9 +23033,9 @@ subset: cell_slim synonym: "mesencephalon lateral rostral interneuron" EXACT [] xref: TAO:0005213 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T01:26:45Z @@ -23045,9 +23048,9 @@ subset: cell_slim synonym: "mesencephalon lateral caudal interneuron" EXACT [] xref: TAO:0005214 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-08T01:29:37Z @@ -23060,9 +23063,9 @@ subset: cell_slim synonym: "mesencephalon lateral medial interneuron" EXACT [] xref: TAO:0005215 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:21:45Z @@ -23075,9 +23078,9 @@ subset: cell_slim synonym: "mesencephalon medial 1 interneuron" EXACT [] xref: TAO:0005216 is_a: ZFA:0005210 ! midbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:23:47Z @@ -23090,9 +23093,9 @@ subset: cell_slim synonym: "caudal ventral interneuron" EXACT [] xref: TAO:0005217 is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000949 ! rhombomere 7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:33:31Z @@ -23105,9 +23108,9 @@ subset: cell_slim synonym: "caudal dorsal interneuron" EXACT [] xref: TAO:0005218 is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000949 ! rhombomere 7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T02:42:52Z @@ -23120,9 +23123,9 @@ synonym: "choroid vascular circuit" RELATED [] synonym: "CVC" EXACT [] xref: TAO:0005219 is_a: ZFA:0000099 ! brain vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001443 ! choroid plexus -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2009-07-09T02:58:20Z @@ -23133,8 +23136,8 @@ namespace: zebrafish_anatomy def: "A melanophore stripe that forms the immature pigment pattern." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005220 is_a: ZFA:0001463 ! melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-07-09T03:59:45Z @@ -23145,8 +23148,8 @@ namespace: zebrafish_anatomy def: "A larval melanophore stripe that forms a band extending from the head to the tail along the dorsal apex of the myotomes." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005221 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-07-09T04:04:10Z @@ -23157,8 +23160,8 @@ namespace: zebrafish_anatomy def: "A larval melanophore stripe that forms a band, of pigmentation extending from the bases of the eyes on each side of the midline to the top of the tail, that underlies the myotomes bilaterally, still is dorsal to the yolk." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005222 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2009-07-09T04:05:57Z @@ -23169,8 +23172,8 @@ namespace: zebrafish_anatomy def: "The larval melanophore stripe that is at the level of the horizontal myoseptum." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005223 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2009-07-09T04:29:18Z @@ -23181,8 +23184,8 @@ namespace: zebrafish_anatomy def: "The larval melanophore stripe that forms a band over the ventral surface of the yolk sac." [ZFIN:ZDB-PUB-961014-576] xref: TAO:0005224 is_a: ZFA:0005220 ! larval melanophore stripe -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2009-07-09T04:30:34Z @@ -23193,8 +23196,8 @@ namespace: zebrafish_anatomy def: "Lip that covers the lower portion of the mouth." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002060 is_a: ZFA:0007006 ! lip -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T04:42:58Z @@ -23205,8 +23208,8 @@ namespace: zebrafish_anatomy def: "Lip that covers the upper portion of the mouth." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001970 is_a: ZFA:0007006 ! lip -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-09T04:43:52Z @@ -23220,9 +23223,9 @@ synonym: "proto neuromast" RELATED [] synonym: "proto-neuromast" RELATED [] xref: TAO:0005227 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2009-07-09T04:49:53Z @@ -23234,9 +23237,9 @@ def: "A portion of tissue that contains the choroid vasculature. It lies at the synonym: "choroid" EXACT [ISBN:1402070861] xref: TAO:0005229 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-14T02:05:16Z @@ -23249,8 +23252,8 @@ subset: cell_slim synonym: "commissural bifurcating longitudinal" EXACT [] xref: TAO:0005230 is_a: ZFA:0005231 ! bifurcate interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-17T01:12:14Z @@ -23262,8 +23265,8 @@ def: "Is a spinal interneuron that has an axon that splits into roughly equal si subset: cell_slim xref: TAO:0005231 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-07-17T01:22:50Z @@ -23277,8 +23280,8 @@ synonym: "larval VeLD" RELATED [] synonym: "multipolar commissural descending interneuron" EXACT [] xref: TAO:0005232 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:46:32Z @@ -23293,8 +23296,8 @@ synonym: "commissural descending interneurons" EXACT [ZFIN:ZDB-PUB-081114-2] synonym: "V2a interneuron" RELATED [] xref: TAO:0005233 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T03:55:01Z @@ -23307,8 +23310,8 @@ subset: cell_slim synonym: "commissural longitudinal ascending interneuron" EXACT [] xref: TAO:0005234 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:14:51Z @@ -23321,8 +23324,8 @@ subset: cell_slim synonym: "unipolar commissural descending interneuron" RELATED [] xref: TAO:0005235 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-07-17T04:26:07Z @@ -23339,8 +23342,8 @@ synonym: "prorubricyte" EXACT [ZFIN:ZDB-PUB-070221-1] xref: CL:0000549 xref: TAO:0005236 is_a: ZFA:0005237 ! erythroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2009-08-10T05:29:27Z @@ -23354,8 +23357,8 @@ synonym: "normoblast" EXACT [] xref: CL:0000765 xref: TAO:0005237 is_a: ZFA:0009325 ! erythroid lineage cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-10T05:13:41Z @@ -23370,9 +23373,9 @@ synonym: "renin secreting cell" EXACT [] xref: CL:0000648 xref: TAO:0005238 is_a: ZFA:0009118 ! smooth muscle cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-10T05:41:07Z @@ -23386,9 +23389,9 @@ synonym: "plug cell" EXACT [] xref: CL:0007022 xref: TAO:0005239 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001110 ! ovarian follicle -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2009-08-10T06:26:10Z @@ -23407,8 +23410,8 @@ synonym: "Kolmer-Agduhr cell" EXACT [] xref: CL:0005007 xref: TAO:0005240 is_a: ZFA:0007120 ! cerebrospinal fluid contacting neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2009-08-11T02:50:27Z @@ -23427,8 +23430,8 @@ synonym: "rubricyte" EXACT [] xref: CL:0000550 xref: TAO:0005241 is_a: ZFA:0005237 ! erythroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T03:38:32Z @@ -23443,8 +23446,8 @@ synonym: "multiciliated epithelial cell" EXACT [] xref: CL:0005012 xref: TAO:0005242 is_a: ZFA:0009035 ! ciliated epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:29:39Z @@ -23459,8 +23462,8 @@ synonym: "single-ciliated epithelial cell" EXACT [] xref: CL:0005013 xref: TAO:0005243 is_a: ZFA:0009035 ! ciliated epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:30:15Z @@ -23474,8 +23477,8 @@ synonym: "auditory support cell" EXACT [] xref: CL:0005014 xref: TAO:0005244 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:41:03Z @@ -23490,8 +23493,8 @@ xref: CL:0005002 xref: TAO:0002148 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-11T04:53:40Z @@ -23505,9 +23508,9 @@ synonym: "blastemal fibroblast" EXACT [] synonym: "blastemal fibroblasts" EXACT PLURAL [] xref: TAO:0005246 is_a: ZFA:0009026 ! fibroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005147 ! regenerating tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-08-12T01:43:26Z @@ -23521,8 +23524,8 @@ synonym: "circumferential ascending interneuron" EXACT [] synonym: "V1 interneuron" RELATED [] xref: TAO:0005247 is_a: ZFA:0000778 ! spinal cord interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-08-21T04:22:15Z @@ -23535,9 +23538,9 @@ synonym: "TCB" EXACT [ZFIN:ZDB-PUB-080908-10] xref: TAO:0005248 is_a: ZFA:0000082 ! vein relationship: develops_from ZFA:0005027 ! posterior cerebral vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005219 ! choroid plexus vascular circuit -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2009-11-02T04:07:52Z @@ -23549,9 +23552,9 @@ def: "Is an interconnected tubular multi-tissue structure that contains fluid th xref: TAO:0001079 xref: TAO:0005249 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2009-11-10T02:31:54Z @@ -23562,9 +23565,9 @@ namespace: zebrafish_anatomy def: "Microvessel of the blood circulation system lined with vascular endothelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005250 is_a: ZFA:0005251 ! microcirculatory vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:15:32Z @@ -23576,9 +23579,9 @@ def: "A portion of tissue that consists of a tube composed of epithelial cells t synonym: "vasculature" RELATED [] xref: TAO:0005251 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:16:24Z @@ -23589,9 +23592,9 @@ namespace: zebrafish_anatomy def: "Microvessel of the lymphatic system lined with a single layer of overlapping endothelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005252 is_a: ZFA:0005251 ! microcirculatory vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:27:39Z @@ -23603,9 +23606,9 @@ def: "Simple squamous epithelium that lines the capsule of the renal glomerulus. synonym: "parietal epithelial layer" EXACT [] xref: TAO:0005253 is_a: ZFA:0001498 ! simple squamous epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005254 ! renal glomerular capsule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2009-11-11T01:39:19Z @@ -23617,9 +23620,9 @@ def: "Portion of tissue that encapsulates the glomerulus of the renal corpuscle. synonym: "Bowman's capsule " EXACT [] xref: TAO:0005254 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2009-11-11T01:45:02Z @@ -23630,9 +23633,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the blood vasculature. Feeds into capillaries. Arterioles carry blood away from the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002138 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T01:46:54Z @@ -23644,9 +23647,9 @@ def: "A portion of tissue formed between the base of the intestinal villi that i synonym: "intestinal crypt" RELATED [ZFIN:ZDB-PUB-090217-11] xref: TAO:0005256 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-07T12:26:13Z @@ -23657,8 +23660,8 @@ namespace: zebrafish_anatomy def: "The vascular endothelium that lines blood vasculature." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005257 is_a: ZFA:0001639 ! vascular endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:16:38Z @@ -23669,9 +23672,9 @@ namespace: zebrafish_anatomy def: "The vascular endothelium that lines the lymph vessels." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005258 is_a: ZFA:0001639 ! vascular endothelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005844 ! lymph vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:18:09Z @@ -23682,8 +23685,8 @@ namespace: zebrafish_anatomy def: "Blood vessel endothelium that has tight junctions between the endothelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005259 is_a: ZFA:0005257 ! blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:19:54Z @@ -23694,8 +23697,8 @@ namespace: zebrafish_anatomy def: "Blood vessel endothelium that has pores that allow passage small molecules and proteins." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005260 is_a: ZFA:0005257 ! blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:21:55Z @@ -23706,8 +23709,8 @@ namespace: zebrafish_anatomy def: "Fenestrated blood vessel endothelium with pores that are large enough for blood cells to pass. The basal lamina and gap junctions may be discontinuous." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005261 is_a: ZFA:0005260 ! fenestrated blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-11-11T02:51:27Z @@ -23719,8 +23722,8 @@ def: "Caudal procurrent ray that is dorsally located on the caudal fin skeleton. synonym: "dorsal procurrent caudal-fin ray" EXACT [] xref: TAO:0001829 is_a: ZFA:0001584 ! caudal fin procurrent ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:06:39Z @@ -23732,8 +23735,8 @@ def: "Caudal procurrent ray that is ventrally located on the caudal fin skeleton synonym: "ventral procurrent ray" EXACT [] xref: TAO:0001830 is_a: ZFA:0001584 ! caudal fin procurrent ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:13:14Z @@ -23747,8 +23750,8 @@ synonym: "ligamentum primordiale " EXACT [] synonym: "maxillo-mandibular ligament" EXACT [] xref: TAO:0001828 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:28:51Z @@ -23759,8 +23762,8 @@ namespace: zebrafish_anatomy def: "Ligament that connects the premaxilla to the maxilla." [TAO:curator] xref: TAO:0001827 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T02:52:49Z @@ -23771,8 +23774,8 @@ namespace: zebrafish_anatomy comment: The DLF in zebrafish is not homologous to the Mammalian DLF. Mammalian DLF is in brain, the fish DLF is in spinal cord. synonym: "DLF" RELATED [] is_a: ZFA:0000318 ! brainstem and spinal white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-02T04:19:10Z @@ -23783,8 +23786,8 @@ namespace: zebrafish_anatomy def: "Muscle that moves parts of the body in a superior direction to an erect position. Antagonistic to depressor muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005267 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-03T05:15:15Z @@ -23795,8 +23798,8 @@ namespace: zebrafish_anatomy def: "A muscle that brings a body part closer to the sagittal plane of the body." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002136 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T12:59:52Z @@ -23807,8 +23810,8 @@ namespace: zebrafish_anatomy def: "A muscle that moves a body part away from the sagittal plane of the body." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002135 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T01:05:41Z @@ -23819,8 +23822,8 @@ namespace: zebrafish_anatomy def: "A muscle that moves body parts into an inferior direction or lowered position. Antagonistic to erector muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005270 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T01:15:51Z @@ -23831,8 +23834,8 @@ namespace: zebrafish_anatomy def: "A muscle that decrease the angle of a joint." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005271 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2009-12-04T01:20:04Z @@ -23846,9 +23849,9 @@ synonym: "juvenile ovary" EXACT [ZFIN:ZDB-PUB-070305-2] xref: TAO:0005272 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0001262 ! gonad primordium -relationship: end ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000041 ! larval:days 21-29 relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2009-12-09T11:35:20Z @@ -23860,9 +23863,9 @@ def: "A thin layer of smooth muscle immediately beneath the base of the villi wh synonym: "intestinal lamina muscularis mucosae" RELATED [http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html] xref: TAO:0005273 is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T01:36:48Z @@ -23873,8 +23876,8 @@ namespace: zebrafish_anatomy def: "A non-striated muscle that is composed of spindle-shaped cells. Smooth muscle usually is organized into sheets that line cavitated organs." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005274 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T02:57:18Z @@ -23885,8 +23888,8 @@ namespace: zebrafish_anatomy def: "Fin muscle that is located on the anterior edge of the fin. Arrector muscles change the angle of the leading edge of the fin during swimming." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002147 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T04:50:10Z @@ -23896,8 +23899,8 @@ name: inclinator muscle namespace: zebrafish_anatomy xref: TAO:0005276 is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T04:51:38Z @@ -23908,8 +23911,8 @@ namespace: zebrafish_anatomy def: "Muscle, composed of long cylindrical, multinucleated cells that attaches to the skeleton via tendons." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005277 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T05:06:51Z @@ -23919,9 +23922,9 @@ name: enteric longitudinal muscle namespace: zebrafish_anatomy def: "Smooth muscle of the enteric muscle system in which the cells are aligned parallel to the lumen of the gut." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001324 ! enteric musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T05:48:52Z @@ -23932,9 +23935,9 @@ namespace: zebrafish_anatomy def: "Smooth muscle of the enteric muscle system in which the cells are aligned perpendicular to the lumen of the gut." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005279 is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001324 ! enteric musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T05:51:25Z @@ -23945,8 +23948,8 @@ namespace: zebrafish_anatomy def: "Muscle composed of cardiac muscle cells that is part of the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005280 is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-07T06:04:03Z @@ -23958,9 +23961,9 @@ def: "The part of the nephron that filters blood." [GOC:cvs, ORCiD:0000-0002-224 synonym: "Malpighian corpuscle" EXACT [] xref: TAO:0005281 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005282 ! nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T01:11:46Z @@ -23971,9 +23974,9 @@ namespace: zebrafish_anatomy def: "Functional unit of the kidney that filters waste." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002153 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T02:47:46Z @@ -23987,9 +23990,9 @@ synonym: "inter-glomerular space" EXACT [] synonym: "urinary space" EXACT [] xref: TAO:0005283 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T02:51:01Z @@ -24000,11 +24003,11 @@ namespace: zebrafish_anatomy def: "Capillary that is part of the renal glomerulus. Glomerular capillary endothelial membranes in zebrafish normally have a fenestrated morphology that is visible at the ultrastructural level." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-000824-1] xref: TAO:0005284 is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001288 ! renal glomerulus relationship: part_of ZFA:0005305 ! kidney vasculature relationship: part_of ZFA:0005590 ! capillary loop nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:00:45Z @@ -24016,9 +24019,9 @@ def: "Membrane between the mesonephric podocytes and the renal glomerular capill synonym: "glomerular filtration membrane" EXACT [] xref: TAO:0005285 is_a: ZFA:0001485 ! basal lamina -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001288 ! renal glomerulus -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:26:30Z @@ -24029,9 +24032,9 @@ namespace: zebrafish_anatomy def: "Middle layer of the glomerular basement membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005286 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:52:52Z @@ -24042,9 +24045,9 @@ namespace: zebrafish_anatomy def: "Layer of the glomerular basement membrane adjacent to the glomerular capillary." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005287 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:56:00Z @@ -24055,9 +24058,9 @@ namespace: zebrafish_anatomy def: "Layer of the glomerular basement membrane adjacent to the podocytes and capsular space." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005288 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005285 ! glomerular basement membrane -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T03:56:32Z @@ -24068,9 +24071,9 @@ namespace: zebrafish_anatomy def: "Tubes in the kidney that collect and transport urine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-071029-9] xref: TAO:0005289 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-19T04:36:59Z @@ -24081,9 +24084,9 @@ namespace: zebrafish_anatomy def: "Renal tubule that connects to the renal corpuscle." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005290 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:39:12Z @@ -24094,9 +24097,9 @@ namespace: zebrafish_anatomy def: "Portion of the renal tubule which is just posterior to the proximal convoluted tubule." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005291 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:41:23Z @@ -24107,9 +24110,9 @@ namespace: zebrafish_anatomy def: "Portion of the renal tubule which is just posterior to the distal early tubule." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005292 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:43:22Z @@ -24121,9 +24124,9 @@ def: "Portion of the renal tubule which is just posterior to the proximal straig synonym: "distal early tubules" EXACT PLURAL [] xref: TAO:0005293 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T12:44:30Z @@ -24134,8 +24137,8 @@ namespace: zebrafish_anatomy def: "Renal duct that collects the output from renal tubules." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005294 is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T01:17:47Z @@ -24146,8 +24149,8 @@ namespace: zebrafish_anatomy def: "Blood vessel that runs along the rostral-caudal axis of the fish." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005295 is_a: ZFA:0001073 ! axial vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:24:10Z @@ -24158,9 +24161,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel that runs along the rostral-caudal axis of the fish." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001073 ! axial vasculature is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:24:34Z @@ -24171,9 +24174,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of cranial vasculature." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005297 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:25:23Z @@ -24184,9 +24187,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel that is located in the head." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005298 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:25:47Z @@ -24197,9 +24200,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005299 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005095 ! fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:52:39Z @@ -24210,9 +24213,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel part of fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005300 is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005095 ! fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:53:08Z @@ -24223,9 +24226,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005301 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005096 ! pectoral fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:54:07Z @@ -24236,9 +24239,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel part of pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005302 is_a: ZFA:0005300 ! fin lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005096 ! pectoral fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:54:43Z @@ -24249,10 +24252,10 @@ namespace: zebrafish_anatomy def: "Lymph vessel that is located in the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005303 is_a: ZFA:0005300 ! fin lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005097 ! caudal fin vasculature relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:55:44Z @@ -24263,9 +24266,9 @@ namespace: zebrafish_anatomy def: "Blood vessel located within the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005304 is_a: ZFA:0005299 ! fin blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005097 ! caudal fin vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-20T02:55:49Z @@ -24276,9 +24279,9 @@ namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005305 is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-20T03:02:06Z @@ -24289,9 +24292,9 @@ namespace: zebrafish_anatomy def: "Blood vessel part of kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005306 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2010-01-20T03:02:27Z @@ -24302,10 +24305,10 @@ namespace: zebrafish_anatomy def: "Arteriole that carries blood into the glomerular capillaries." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002139 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T03:02:56Z @@ -24316,10 +24319,10 @@ namespace: zebrafish_anatomy def: "Arteriole that carries blood out of the glomerular capillaries." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002140 is_a: ZFA:0005255 ! arteriole -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005281 ! renal corpuscle relationship: part_of ZFA:0005305 ! kidney vasculature -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-01-20T03:05:49Z @@ -24330,9 +24333,9 @@ namespace: zebrafish_anatomy def: "Capillary that is part of the pronephric glomerulus. Glomerular capillary endothelial membranes in zebrafish normally have a fenestrated morphology that is visible at the ultrastructural level." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-000824-1] xref: TAO:0005309 is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:29:44Z @@ -24344,9 +24347,9 @@ def: "Portion of tissue that encapsulates the glomerulus of the pronephros." [GO synonym: "Bowman's capsule " EXACT [] xref: TAO:0005310 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:39:01Z @@ -24358,9 +24361,9 @@ def: "Simple squamous epithelium that lines the capsule of the pronephric glomer synonym: "pronephric parietal epithelial layer" EXACT [] xref: TAO:0005311 is_a: ZFA:0001498 ! simple squamous epithelium -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0005310 ! pronephric glomerular capsule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:40:01Z @@ -24374,9 +24377,9 @@ synonym: "inter-glomerular space" EXACT [] synonym: "urinary space" EXACT [] xref: TAO:0005312 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000151 ! pronephros -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:41:05Z @@ -24388,9 +24391,9 @@ def: "Membrane between the pronephric podocytes and the pronephric glomerular ca synonym: "pronephric glomerular filtration membrane" EXACT [] xref: TAO:0005313 is_a: ZFA:0001485 ! basal lamina -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0001557 ! pronephric glomerulus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T11:59:03Z @@ -24401,9 +24404,9 @@ namespace: zebrafish_anatomy def: "Any of the tubular multi-tissue structures through which blood circulates in the body." [vHOG:curator] xref: TAO:0002137 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T02:17:51Z @@ -24414,9 +24417,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the blood vasculature formed by the anastomosis of capillaries. Venules carry blood toward the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005315 is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001079 ! blood vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-01-29T03:29:15Z @@ -24429,9 +24432,9 @@ synonym: "fin membrane pectoral fin bud" RELATED [] xref: TAO:0005316 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000085 ! apical ectodermal ridge pectoral fin bud -relationship: end ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000033 ! hatching:long-pec relationship: part_of ZFA:0000141 ! pectoral fin bud -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-02-10T02:37:39Z @@ -24444,9 +24447,9 @@ synonym: "pectoral fin membrane" EXACT [] xref: TAO:0005317 is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005316 ! fin fold pectoral fin bud -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-02-10T03:27:29Z @@ -24468,8 +24471,8 @@ def: "Lymph vessel that is located between the somites." [GOC:cvs, ORCiD:0000-00 synonym: "islv" EXACT [] xref: TAO:0005319 is_a: ZFA:0005105 ! lymph vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:28:00Z @@ -24480,8 +24483,8 @@ namespace: zebrafish_anatomy synonym: "dllv" EXACT [] xref: TAO:0005320 is_a: ZFA:0005296 ! axial lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-02-10T05:29:42Z @@ -24492,9 +24495,9 @@ namespace: zebrafish_anatomy def: "Smooth muscle that is part of the blood vessel wall." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060216-3] xref: TAO:0005321 is_a: ZFA:0005274 ! smooth muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005314 ! blood vessel -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-10T05:39:30Z @@ -24509,9 +24512,9 @@ xref: CL:0005009 xref: TAO:0005322 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009374 ! kidney epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-02-10T06:32:34Z @@ -24525,8 +24528,8 @@ xref: CL:0005006 xref: TAO:0005323 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0007123 ! ionocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T01:18:18Z @@ -24538,9 +24541,9 @@ def: "Ionocyte located in the gills." [GOC:cvs, ORCiD:0000-0002-2244-7917] subset: cell_slim xref: TAO:0005324 is_a: ZFA:0005323 ! ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000354 ! gill -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T01:22:16Z @@ -24554,9 +24557,9 @@ synonym: "extrabranchial ionocyte" RELATED [] synonym: "skin ionocyte" EXACT [] xref: TAO:0005325 is_a: ZFA:0005323 ! ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T02:13:14Z @@ -24570,9 +24573,9 @@ synonym: "NaK-MRC" RELATED [] synonym: "NaR cell" RELATED [] xref: TAO:0005326 is_a: ZFA:0005325 ! integument ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T02:29:17Z @@ -24586,9 +24589,9 @@ synonym: "HR cell" RELATED [] synonym: "VH-MRC" RELATED [] xref: TAO:0005327 is_a: ZFA:0005325 ! integument ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T02:32:20Z @@ -24602,8 +24605,8 @@ xref: CL:0005001 xref: TAO:0005328 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24617,8 +24620,8 @@ xref: CL:0005003 xref: TAO:0005329 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24632,8 +24635,8 @@ xref: CL:0005004 xref: TAO:0005331 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24647,8 +24650,8 @@ xref: CL:0005005 xref: TAO:0005332 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-02-22T03:51:51Z @@ -24659,9 +24662,9 @@ namespace: zebrafish_anatomy def: "A multi-tissue mediosagittal cylinder-shaped structure, clearly isolated from the jaw and adhered by differentiated plicae to the lateral walls. It is composed of a muscle surrounded by a squamous epithelium." [ZFIN:ZDB-PUB-060921-12, ZFIN:ZDB-PUB-091204-24] xref: TAO:0005333 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000547 ! mouth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T03:04:28Z @@ -24672,9 +24675,9 @@ namespace: zebrafish_anatomy def: "The thick, high squamous-stratified epithelium that covers the lips. It contains abundant melanocytes, many mucous cells and has well differentiated taste buds." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060921-12] xref: TAO:0005334 is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007006 ! lip -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T03:12:14Z @@ -24686,8 +24689,8 @@ def: "Embryonic structure that forms from the anterior gut epithelium at the lev xref: TAO:0005335 is_a: ZFA:0001105 ! embryonic structure relationship: develops_from ZFA:0005336 ! presumptive swim bladder -relationship: end ZFS:0000033 ! Hatching:Long-pec -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000033 ! hatching:long-pec +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2010-03-18T03:59:33Z @@ -24700,9 +24703,9 @@ synonym: "swim bladder anlage" RELATED [ZFIN:ZDB-PUB-100202-11] xref: TAO:0005336 is_a: ZFA:0001116 ! presumptive structure relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-03-18T04:20:42Z @@ -24714,8 +24717,8 @@ def: "Portion of tissue that forms from the swim bladder epithelium at the anter xref: TAO:0002145 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000076 ! swim bladder -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-03-18T04:28:20Z @@ -24728,9 +24731,9 @@ synonym: "posterior recess of diencephalic ventricle" EXACT [ZFIN:ZDB-PUB-091221 synonym: "recessus posterior " EXACT [ZFIN:ZDB-PUB-961014-1280] xref: TAO:0005338 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000161 ! third ventricle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T05:40:53Z @@ -24741,9 +24744,9 @@ namespace: zebrafish_anatomy def: "Is a diencephalic nucleus located in the caudal periventricular hypothalamus surrounding the lateral recess of the third ventricle." [ZFIN:ZDB-PUB-091221-27] xref: TAO:0005339 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000324 ! caudal periventricular hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T05:52:56Z @@ -24754,9 +24757,9 @@ namespace: zebrafish_anatomy def: "A diencephalic nucleus that is part of caudal periventricular hypothalmus surrounding the posterior recess of the third ventricle." [ZFIN:ZDB-PUB-091221-27] xref: TAO:0005340 is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000324 ! caudal periventricular hypothalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T05:59:24Z @@ -24769,8 +24772,8 @@ synonym: "medial longitudinal CA tract" EXACT [ZFIN:ZDB-PUB-091221-28] synonym: "mlct" EXACT [] xref: TAO:0005341 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:07:36Z @@ -24781,8 +24784,8 @@ namespace: zebrafish_anatomy def: "CNS white matter, an axonal tract between ventral diencephalon and ventral telencephalon. At 3 d, the anterior catecholaminergic tract includes noradrenergic projections from the hindbrain and dopaminergic projections from ventral dopaminergic neurons. During later development, other catecholaminergic projections may also contribute to the anterior catecholaminergic tract." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-091221-28] xref: TAO:0002144 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:11:28Z @@ -24793,8 +24796,8 @@ namespace: zebrafish_anatomy def: "CNS white matter, axonal tract interconnecting catecholaminergic cell groups in the posterior tuberculum and hypothalamus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-091221-28] xref: TAO:0005343 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:13:25Z @@ -24805,8 +24808,8 @@ namespace: zebrafish_anatomy def: "CNS white matter, axonal tract between the preoptic region and ventral diencephalon." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-091221-28] xref: TAO:0005344 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-18T06:14:28Z @@ -24818,8 +24821,8 @@ def: "Connective tissue in which fat is stored. All adipose tissue in the zebraf synonym: "white adipose tissue" EXACT [] xref: TAO:0002134 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-03-19T10:04:38Z @@ -24830,9 +24833,9 @@ namespace: zebrafish_anatomy def: "Portion of the pancreatic duct, external to the pancreas body that connects the pancreas with the hepatopancreatic ampulla." [ZFIN:ZDB-PUB-050623-3] xref: TAO:0005346 is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2010-03-19T03:17:51Z @@ -24843,8 +24846,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 4." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001732 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:13:30Z @@ -24855,8 +24858,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 5." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001980 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:31:28Z @@ -24867,8 +24870,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 6." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001981 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:31:47Z @@ -24879,8 +24882,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 7." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0001982 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:32:12Z @@ -24891,8 +24894,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 8." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002149 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:32:37Z @@ -24903,8 +24906,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 11. May have hemal arch and rib." [ZFIN:ZDB-PUB-020807-1] xref: TAO:0002152 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:33:09Z @@ -24915,8 +24918,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 9." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002150 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:33:57Z @@ -24927,8 +24930,8 @@ namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 10." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0002151 is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-21T04:34:16Z @@ -24940,8 +24943,8 @@ def: "First lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 1 " EXACT [] xref: TAO:0001754 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:26:13Z @@ -24953,8 +24956,8 @@ def: "Second lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 2" EXACT [] xref: TAO:0001755 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:28:14Z @@ -24966,8 +24969,8 @@ def: "Third lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 3" EXACT [] xref: TAO:0001756 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:28:28Z @@ -24979,8 +24982,8 @@ def: "Fourth lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 4" EXACT [] xref: TAO:0001757 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:09Z @@ -24992,8 +24995,8 @@ def: "Fifth lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 5" EXACT [] xref: TAO:0001758 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:18Z @@ -25005,8 +25008,8 @@ def: "Sixth lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "dorsal fin ray 6" EXACT [] xref: TAO:0001759 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:33Z @@ -25018,8 +25021,8 @@ def: "Seventh lepidotrichium of dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917 synonym: "dorsal fin ray 7" EXACT [] xref: TAO:0001760 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-22T05:29:52Z @@ -25030,9 +25033,9 @@ namespace: zebrafish_anatomy def: "First proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001818 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005364 ! dorsal fin pterygiophore 1 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:39:57Z @@ -25043,9 +25046,9 @@ namespace: zebrafish_anatomy def: "Second proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001819 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005365 ! dorsal fin pterygiophore 2 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:40:13Z @@ -25057,8 +25060,8 @@ def: "Dorsal fin pterygiophore that is the rostralmost pterygiophore of the dors synonym: "dorsal fin radial 1" EXACT [] xref: TAO:0002094 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:47:57Z @@ -25070,8 +25073,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 1 of the dorsal synonym: "dorsal fin radial 2" EXACT [] xref: TAO:0005365 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:12Z @@ -25083,8 +25086,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 2 of the dorsal f synonym: "dorsal fin radial 3" EXACT [] xref: TAO:0005366 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:36Z @@ -25096,8 +25099,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 3 of the dorsal synonym: "dorsal fin radial 4" EXACT [] xref: TAO:0005367 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:48:48Z @@ -25109,8 +25112,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 4 of the dorsal synonym: "dorsal fin radial 5" EXACT [] xref: TAO:0005368 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:00Z @@ -25122,8 +25125,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 5 of the dorsal synonym: "dorsal fin radial 6" EXACT [] xref: TAO:0005369 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:26Z @@ -25135,8 +25138,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 6 of the dorsal synonym: "dorsal fin radial 7" EXACT [] xref: TAO:0005370 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:49:39Z @@ -25148,8 +25151,8 @@ def: "Dorsal fin pterygiophore that is caudal to pterygiophore 7 of the dorsal synonym: "dorsal fin radial 8" EXACT [] xref: TAO:0005371 is_a: ZFA:0001419 ! dorsal fin pterygiophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:53:09Z @@ -25160,9 +25163,9 @@ namespace: zebrafish_anatomy def: "First distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005372 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005364 ! dorsal fin pterygiophore 1 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:54:49Z @@ -25173,9 +25176,9 @@ namespace: zebrafish_anatomy def: "Second distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005373 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005365 ! dorsal fin pterygiophore 2 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:55:31Z @@ -25186,9 +25189,9 @@ namespace: zebrafish_anatomy def: "Third distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005374 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005366 ! dorsal fin pterygiophore 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:11Z @@ -25199,9 +25202,9 @@ namespace: zebrafish_anatomy def: "Fourth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005375 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005367 ! dorsal fin pterygiophore 4 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:21Z @@ -25212,9 +25215,9 @@ namespace: zebrafish_anatomy def: "Fifth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005376 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005368 ! dorsal fin pterygiophore 5 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:32Z @@ -25225,9 +25228,9 @@ namespace: zebrafish_anatomy def: "Sixth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005377 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005369 ! dorsal fin pterygiophore 6 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:57:48Z @@ -25238,9 +25241,9 @@ namespace: zebrafish_anatomy def: "Seventh distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005378 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005370 ! dorsal fin pterygiophore 7 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:04Z @@ -25251,9 +25254,9 @@ namespace: zebrafish_anatomy def: "Eighth distal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005379 is_a: ZFA:0000936 ! dorsal fin distal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005371 ! dorsal fin pterygiophore 8 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:19Z @@ -25264,9 +25267,9 @@ namespace: zebrafish_anatomy def: "Third proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005380 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005366 ! dorsal fin pterygiophore 3 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:58:39Z @@ -25277,9 +25280,9 @@ namespace: zebrafish_anatomy def: "Fourth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005381 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005367 ! dorsal fin pterygiophore 4 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:08Z @@ -25290,9 +25293,9 @@ namespace: zebrafish_anatomy def: "Fifth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005382 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005368 ! dorsal fin pterygiophore 5 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:20Z @@ -25303,9 +25306,9 @@ namespace: zebrafish_anatomy def: "Sixth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005383 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005369 ! dorsal fin pterygiophore 6 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:30Z @@ -25316,9 +25319,9 @@ namespace: zebrafish_anatomy def: "Seventh proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005384 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005370 ! dorsal fin pterygiophore 7 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:42Z @@ -25329,9 +25332,9 @@ namespace: zebrafish_anatomy def: "Eighth proximal radial of the dorsal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005385 is_a: ZFA:0000947 ! dorsal fin proximal radial -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005371 ! dorsal fin pterygiophore 8 -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2010-04-22T05:59:54Z @@ -25343,8 +25346,8 @@ def: "Anatomical space that is an opening in a bone, usually for passage of bloo synonym: "foramina" EXACT PLURAL [] xref: TAO:0001736 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:01:27Z @@ -25355,8 +25358,8 @@ namespace: zebrafish_anatomy def: "Foramen in the occipital region of neurocranium to allow passage of spinal cord." [TAO:curator] xref: TAO:0002045 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:02:49Z @@ -25367,8 +25370,8 @@ namespace: zebrafish_anatomy def: "Anatomical space that is a concavity, shallow depression, or groove on a bone." [TAO:curator] xref: TAO:0001743 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:04:59Z @@ -25379,8 +25382,8 @@ namespace: zebrafish_anatomy def: "Anatomical space that is the external opening of a gill slit connecting the pharyngeal cavity to the exterior. Gill opening is usually paired and located on the lateral or ventral surfaces of the head." [TAO:curator] xref: TAO:0002057 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:06:34Z @@ -25391,9 +25394,9 @@ namespace: zebrafish_anatomy def: "Gill ray is a slender, usually rod-like cartilage within a gill filament and ligamentously tied to its associated pharyngeal arch bone or cartilage." [TAO:curator] xref: TAO:0001856 is_a: ZFA:0001460 ! pharyngeal arch cartilage -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001613 ! pharyngeal arch 3-7 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T11:17:01Z @@ -25404,8 +25407,8 @@ namespace: zebrafish_anatomy def: "Lateral line system on head and pectoral girdle." [TAO:WD] xref: TAO:0001873 is_a: ZFA:0001468 ! anterior lateral line system -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:42:45Z @@ -25416,9 +25419,9 @@ namespace: zebrafish_anatomy def: "Sensory canal associated with the infraorbital bones. Located in close proximity to the otic and supraorbital sensory canals at their union. The infraorbital sensory canal is bilaterally paired. The canal has 3 pores. The first opens dorsally below the nasal sac, the second opens laterally posterior to the anterior maxilary barbel, the third pore is present where infraorbital 1 meets infraorbital 2." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0001811 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2010-04-23T01:44:27Z @@ -25429,9 +25432,9 @@ namespace: zebrafish_anatomy def: "Sensory canal between and in close proximity posteriorly with the post-otic and preoperculo-mandibular sensory canals, and anteriorly with the supraorbital and infraorbital sensory canals. The otic sensory canal is bilaterally paired." [TAO:curator] xref: TAO:0001629 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:45:04Z @@ -25443,9 +25446,9 @@ def: "Sensory canal that forms dorsal to the horizontal semicircular canal of t synonym: "postotic sensory canal" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001619 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:45:48Z @@ -25456,9 +25459,9 @@ namespace: zebrafish_anatomy def: "Sensory canal lateral or ventral to and in close proximity to the otic and post-otic sensory canals at their union. The preoperculo-mandibular sensory canal is bilaterally paired and associated with the preopercle, angular and dentary bones." [TAO:curator] xref: TAO:0001812 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T01:59:39Z @@ -25469,9 +25472,9 @@ namespace: zebrafish_anatomy def: "Sensory canal contained in the nasal and frontal bones. It contains 4 or 5 neuromast. The first neuromast is positioned in the tubular nasal bone and the other neuromasts are located in the frontal bone. The canal is anterior to and in close proximity to the otic and infraorbital sensory canals. The supraorbital sensory canal is bilaterally paired." [TAO:curator, ZFIN:ZDB-PUB-031103-11] xref: TAO:0001810 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005391 ! head sensory canal system -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2010-04-23T02:00:48Z @@ -25482,9 +25485,9 @@ namespace: zebrafish_anatomy def: "Nerve that is a branch of cranial nerve VII that passes through or around the suspensorium to innervate muscles and sensory organs on or near pharyngeal arch 2." [TAO:curator] xref: TAO:0002010 is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000664 ! cranial nerve VII -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T02:54:34Z @@ -25496,9 +25499,9 @@ def: "Actinotrichium that is part of the anal fin skeleton." [TAO:curator] synonym: "anal fin actinotricia" EXACT PLURAL [] xref: TAO:0000375 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000167 ! anal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:54:17Z @@ -25509,8 +25512,8 @@ namespace: zebrafish_anatomy def: "First lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001769 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:18Z @@ -25521,8 +25524,8 @@ namespace: zebrafish_anatomy def: "Second lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001770 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:31Z @@ -25533,8 +25536,8 @@ namespace: zebrafish_anatomy def: "Third epidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001771 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:43Z @@ -25545,8 +25548,8 @@ namespace: zebrafish_anatomy def: "Fourth lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001772 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:57:55Z @@ -25557,8 +25560,8 @@ namespace: zebrafish_anatomy def: "Fifth lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001773 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:58:07Z @@ -25569,8 +25572,8 @@ namespace: zebrafish_anatomy def: "Sixth lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001774 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:58:19Z @@ -25581,8 +25584,8 @@ namespace: zebrafish_anatomy def: "Seventh lepidotrichium of anal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001775 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T04:58:32Z @@ -25594,8 +25597,8 @@ def: "Fossa or chamber on anterior portion of orbital region of neurocranium tha comment: Dbxref for ZFIN changed to match actual database accession number. Old Dbxref ZDB-ANAT-100614-560 correct Dbxref ZDB-ANAT-100614-60. xref: TAO:0001927 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T05:11:17Z @@ -25606,8 +25609,8 @@ namespace: zebrafish_anatomy def: "Barbel that is associated with the anterior nostril. Anterior nasal barbel is paired." [TAO:curator] xref: TAO:0001937 is_a: ZFA:0000622 ! barbel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T05:12:00Z @@ -25620,9 +25623,9 @@ synonym: "ZMB" EXACT [ZFIN:ZDB-PUB-140813-6] xref: TAO:0001938 is_a: ZFA:0000622 ! barbel is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-04-23T05:13:52Z @@ -25633,9 +25636,9 @@ namespace: zebrafish_anatomy def: "The dorsal part of the ear. Comprises the three semicircular canals, which connect to the utricle." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005409 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T10:43:19Z @@ -25646,9 +25649,9 @@ namespace: zebrafish_anatomy def: "The ventral portion of the ear. It contains the saccule and the lagena which are the primary auditory organs." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005410 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T10:51:56Z @@ -25659,9 +25662,9 @@ namespace: zebrafish_anatomy def: "Duct that forms when the nonampullary ends of the posterior and anterior semicircular canals merge. The common crus descends connecting the semicircular canals to the horizontal canal." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-010912-7, ZFIN:ZDB-PUB-020403-4] xref: TAO:0005411 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005409 ! pars superior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T11:03:13Z @@ -25672,9 +25675,9 @@ namespace: zebrafish_anatomy def: "Duct that crosses the midline connecting the sacculi." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0005412 is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001138 ! vestibuloauditory system -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: ceri creation_date: 2010-05-17T03:08:14Z @@ -25685,9 +25688,9 @@ namespace: zebrafish_anatomy def: "Portion of organism substance that is an extracellular fluid that has a low potassium concentration." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-7] xref: TAO:0005413 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005459 ! perilymphatic space -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T03:11:11Z @@ -25698,10 +25701,10 @@ namespace: zebrafish_anatomy def: "The portion of organism substance that is an extracellular fluid that has a high potassium and sodium concentration. It bathes the hair cells and is thought to be generated by the semicircular canal epithelium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090731-6] xref: TAO:0005414 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005409 ! pars superior ear relationship: part_of ZFA:0005410 ! pars inferior ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-17T03:11:30Z @@ -25712,9 +25715,9 @@ namespace: zebrafish_anatomy def: "Foramen in the inner ear." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0005415 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-18T11:11:52Z @@ -25725,8 +25728,8 @@ namespace: zebrafish_anatomy def: "Inner ear foramen that connects the lagena to the caudal half of the saccule." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-020403-4] xref: TAO:0005416 is_a: ZFA:0005415 ! inner ear foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-19T07:13:29Z @@ -25736,8 +25739,8 @@ name: utriculosaccular foramen namespace: zebrafish_anatomy def: "Inner ear foramen that connects the rostral saccula to the utricle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-020403-4] is_a: ZFA:0005415 ! inner ear foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceri creation_date: 2010-05-19T07:15:09Z @@ -25749,8 +25752,8 @@ def: "Opening in the neurocranium to allow communication between the swim bladde synonym: "auditory fenestrae" EXACT PLURAL [] xref: TAO:0002066 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:28:33Z @@ -25761,8 +25764,8 @@ namespace: zebrafish_anatomy def: "Foramen through which cranial nerve VIII (auditory) exits." [TAO:curator] xref: TAO:0001742 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:29:43Z @@ -25773,8 +25776,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the autopalatine and lateral ethmoid and bones. Autopalatine-lateral ethmoid joint is paired." [TAO:curator] xref: TAO:0001608 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:31:28Z @@ -25785,8 +25788,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the autopalatine cartilage or bone and maxilla." [TAO:curator] xref: TAO:0001942 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2010-05-25T05:32:51Z @@ -25797,8 +25800,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates autopalatine and vomer bones. Autopalatine vomer joint is paired." [TAO:curator] xref: TAO:0001784 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:34:03Z @@ -25809,8 +25812,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the basioccipital and exoccipital. Basioccipital exoccipital joint is paired." [TAO:curator] xref: TAO:0002038 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T05:55:17Z @@ -25822,9 +25825,9 @@ def: "Actinotrichium that is part of the caudal fin skeleton." [TAO:curator] synonym: "caudal fin actinotrichia" EXACT PLURAL [] xref: TAO:0000437 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000862 ! caudal fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-25T06:07:35Z @@ -25835,8 +25838,8 @@ namespace: zebrafish_anatomy def: "A multi-tissue structure that is comprised of a secretory epithelial layer and a connective tissue layer." [http://en.wikipedia.org/wiki/Serous_membrane] xref: TAO:0005425 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-05-26T10:36:36Z @@ -25847,8 +25850,8 @@ namespace: zebrafish_anatomy def: "Foramen that is located in the coracoid." [TAO:curator] xref: TAO:0001737 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T01:35:35Z @@ -25859,8 +25862,8 @@ namespace: zebrafish_anatomy def: "Foramen located on the dentary for passage of the mandibular nerve." [TAO:curator] xref: TAO:0002012 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T01:36:29Z @@ -25872,8 +25875,8 @@ def: "Foramen in the orbital region of the neurocranium for the passage of the o synonym: "optic nerve (II) foramen" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0002025 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:34:08Z @@ -25884,8 +25887,8 @@ namespace: zebrafish_anatomy def: "Foramen for the passage of the olfactory nerve or cranial nerve 1." [TAO:curator] xref: TAO:0001804 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:35:17Z @@ -25896,8 +25899,8 @@ namespace: zebrafish_anatomy def: "Foramen in the bone or cartilage comprising the anterior wall of the orbit, and through which passes at least the deep ophthalmic branch of cranial nerve V (trigeminal)." [TAO:curator] xref: TAO:0002031 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:36:02Z @@ -25908,8 +25911,8 @@ namespace: zebrafish_anatomy def: "Foramen that is located in the scapula. The scapular foramen is paired and formed by a ring of bone." [TAO:curator] xref: TAO:0001735 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:37:13Z @@ -25920,8 +25923,8 @@ namespace: zebrafish_anatomy def: "Foramen through which the superficial ophthalmic nerve passes." [TAO:curator] xref: TAO:0001748 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T02:38:20Z @@ -25932,8 +25935,8 @@ namespace: zebrafish_anatomy def: "Barbel that originates on the chin." [TAO:curator] xref: TAO:0002024 is_a: ZFA:0000622 ! barbel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-05-26T05:43:41Z @@ -25944,8 +25947,8 @@ namespace: zebrafish_anatomy def: "Acellular anatomical structure that is a natural outgrowth, prominence, or point that is part of the surface of a tooth." [TAO:curator] xref: TAO:0001973 is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-05-26T06:11:37Z @@ -25957,8 +25960,8 @@ def: "Skeletal element which is a slender, horny, flexible, unsegmented fibril w synonym: "actinotrichia" EXACT PLURAL [] xref: TAO:0000089 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-06-08T04:31:42Z @@ -25968,9 +25971,9 @@ name: pectoral fin nerve namespace: zebrafish_anatomy def: "Nerve that is part of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-20T10:18:37Z @@ -25980,8 +25983,8 @@ name: pectoral fin motor nerve namespace: zebrafish_anatomy def: "Motor nerve that is located in the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005436 ! pectoral fin nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-20T10:19:45Z @@ -25991,8 +25994,8 @@ name: pectoral fin sensory nerve namespace: zebrafish_anatomy def: "Sensory nerve that innervates the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005436 ! pectoral fin nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-20T10:21:38Z @@ -26002,8 +26005,8 @@ name: pectoral fin motor nerve 1 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:22:40Z @@ -26013,8 +26016,8 @@ name: pectoral fin motor nerve 2 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and rostral of all other motor nerves and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:27:40Z @@ -26024,8 +26027,8 @@ name: pectoral fin motor nerve 3 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the dorsal side of the fin caudal of nerve 1 and 2 and rostral of nerve 4 and innervates the dorsal side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-20T10:28:55Z @@ -26036,8 +26039,8 @@ namespace: zebrafish_anatomy def: "Fossa of opercle that articulates with hyomandibular condyle for opercle." [TAO:curator] xref: TAO:0001928 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-24T02:57:49Z @@ -26048,9 +26051,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is a fluid-filled canal in the integument and usually dermal bones, and contains one or more neuromasts." [TAO:curator] xref: TAO:0001612 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-24T05:31:47Z @@ -26061,8 +26064,8 @@ namespace: zebrafish_anatomy def: "Sensory canal on trunk which is posterior to the pectoral girdle and often reaching to the caudal fin. The trunk sensory canal is bilaterally paired." [TAO:curator] xref: TAO:0001617 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-24T05:39:49Z @@ -26073,8 +26076,8 @@ namespace: zebrafish_anatomy def: "Sensory canal that crosses over the dorsal midline and in close proximity to the contralateral post-otic sensory canals. The supratemporal sensory canal is unpaired." [TAO:curator] xref: TAO:0001630 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T10:45:28Z @@ -26084,9 +26087,9 @@ name: neuromast foramen namespace: zebrafish_anatomy def: "Foramen in a bone that is part of a sensory canal." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005443 ! sensory canal -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-28T10:26:50Z @@ -26097,8 +26100,8 @@ namespace: zebrafish_anatomy def: "Sensory canal that is a side branch between a sensory canal proximally and a pore at its distal end. Sensory canal tubule is bilaterally paired although often imperfectly so." [TAO:curator] xref: TAO:0001933 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T10:46:49Z @@ -26109,9 +26112,9 @@ namespace: zebrafish_anatomy def: "Sensory canal associated with the preopercle bone. It lies in close proximity with the otic and post-otic sensory canals at their union, and anteroventrally with the mandibular sensory canal. The preopercular sensory canal is bilaterally paired." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001813 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2010-06-25T10:58:48Z @@ -26122,8 +26125,8 @@ namespace: zebrafish_anatomy def: "An anatomical space that is an opening, usually at the end of a canal or duct, on the surface of the integument or the lining of an internal anatomical space." [TAO:curator] xref: TAO:0001791 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-28T11:08:35Z @@ -26133,8 +26136,8 @@ name: pectoral fin motor nerve 4 namespace: zebrafish_anatomy def: "Pectoral fin motor nerve that enters the fin from the ventral side of the fin and innervates the ventral side of the pectoral fin." [ZFIN:ZDB-PUB-070726-9] is_a: ZFA:0005437 ! pectoral fin motor nerve -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-06-28T01:47:43Z @@ -26145,9 +26148,9 @@ namespace: zebrafish_anatomy def: "Sensory canal associated with the angular and dentary bones. Located anterior and ventral to and in close proximity with the preoperculo-mandibular sensory canal. The mandible sensory canal is bilaterally paired and does not meet at the mandibular symphysis. The mandibular lateral line canal has 3 neuromast located between the canal pores. Two neuromast are located in the portion of the can in the dentary bone. The third neuromast is located in the anguloarticular bone. The rostral end of the canal has a terminal pore adjacent to the mandibular symphysis. There are three more pores, two, at the posterior of the dentary and the anterior of the anguloarticular share a common epithelial pore." [TAO:curator, ZFIN:ZDB-PUB-031103-11] xref: TAO:0001814 is_a: ZFA:0005443 ! sensory canal -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005395 ! preoperculo-mandibular sensory canal -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2010-06-25T12:27:58Z @@ -26159,9 +26162,9 @@ def: "Tract which originates from several clusters of cell bodies in the rostral synonym: "TPC" RELATED [ZFIN:ZDB-PUB-961014-1268] synonym: "tract of the posterior commissure" EXACT [ZFIN:ZDB-PUB-961014-421] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000320 ! caudal commissure -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-07-21T01:49:43Z @@ -26172,8 +26175,8 @@ namespace: zebrafish_anatomy def: "Opening in the prootic. The basicapsular fenestra is paired." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "basicapsular fenestrae" EXACT PLURAL [] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T05:40:06Z @@ -26184,8 +26187,8 @@ namespace: zebrafish_anatomy def: "Fossa where the anteromedial rim is formed by the prootic, the remainder of the fossa is formed by the exoccipital and pterotic." [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001974 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T05:47:28Z @@ -26197,8 +26200,8 @@ def: "Foramen formed between the anterolateral extension of the prootic that con synonym: "anterior trigemino-facialis foramen of Howes" EXACT [] synonym: "trigeminal notch of Harrington" EXACT [] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-06-25T05:53:27Z @@ -26208,8 +26211,8 @@ name: sinus impar namespace: zebrafish_anatomy def: "Perilymphatic compartment of the zebrafish ear. Chamber positioned ventral of the medulla, the anterior end surrounds the posterior portion of the transverse canal." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-010912-7] is_a: ZFA:0005459 ! perilymphatic space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:01:50Z @@ -26220,8 +26223,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the dorsal hypohyal and urohyal bones. Dorsal hypohyal-urohyal joint is paired." [TAO:curator] xref: TAO:0001847 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:02:25Z @@ -26232,8 +26235,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the dorsal hypohyal and ventral hypohyal bones. Dorsal hypohyal-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001845 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:02:53Z @@ -26243,9 +26246,9 @@ name: perilymphatic space namespace: zebrafish_anatomy def: "Space that contains perilymph." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:03:28Z @@ -26255,8 +26258,8 @@ name: atrium of sinus impar namespace: zebrafish_anatomy def: "Bilaterally paired perilymphatic chambers posterior to the sinus impar. These connect to the anterior end of the otic duct." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-010912-7] is_a: ZFA:0005459 ! perilymphatic space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:06:23Z @@ -26266,8 +26269,8 @@ name: perilymphatic duct namespace: zebrafish_anatomy def: "Duct that contains perilymph." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:15:02Z @@ -26277,8 +26280,8 @@ name: otic duct namespace: zebrafish_anatomy def: "Pair of perilymphatic ducts that extend from the dorsal ends of the atria of the sinus impar, pass on either side of the medulla and merge and extend dorsally toward the surface of the head." [ZFIN:ZDB-PUB-010912-7] is_a: ZFA:0005461 ! perilymphatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T02:15:52Z @@ -26288,9 +26291,9 @@ name: oral ectoderm namespace: zebrafish_anatomy def: "Ectoderm of the oral region." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0000016 ! ectoderm -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000590 ! oral region -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2010-07-21T03:22:11Z @@ -26301,8 +26304,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the dentary and anguloarticular. Dentary-anguloarticular joint is paired." [TAO:curator] xref: TAO:0001749 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:56:09Z @@ -26313,8 +26316,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and branchiostegal ray bones. Ceratohyal-branchiostegal ray joint is paired." [TAO:curator] xref: TAO:0001850 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:56:35Z @@ -26325,8 +26328,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and ventral hypohyal bones. Ceratohyal-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001844 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:56:50Z @@ -26337,8 +26340,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ceratohyal and dorsal hypohyal bones. Ceratohyal-dorsal hypohyal joint is paired." [TAO:curator] xref: TAO:0001843 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:57:08Z @@ -26349,8 +26352,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the frontal and pterotic. Frontal-pterotic joint is paired." [TAO:curator] xref: TAO:0001711 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:57:53Z @@ -26361,8 +26364,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the hyomandibula bone and metapterygoid bone." [TAO:curator] xref: TAO:0001979 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:58:13Z @@ -26373,8 +26376,8 @@ namespace: zebrafish_anatomy def: "Joint between the right and left coracoid bones of the pectoral girdle." [TAO:curator] xref: TAO:0002040 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:58:45Z @@ -26385,8 +26388,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the left and right basipterygium cartilage or bone. Inter-basipterygium joint is unpaired." [TAO:curator] xref: TAO:0001939 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T03:59:58Z @@ -26400,9 +26403,9 @@ synonym: "interfrontal suture" EXACT [ZFIN:ZDB-PUB-060323-12] synonym: "metopic suture" RELATED [ZFIN:ZDB-PUB-060323-12] xref: TAO:0001922 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:00Z @@ -26413,8 +26416,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the interhyal and epihyal bones, or interhyal and ceratohyal cartilages. Interhyal-epihyal joint is paired." [TAO:curator] xref: TAO:0001841 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:23Z @@ -26425,8 +26428,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the left and right hypobranchial 3 cartilages or bones. Inter-hypobranchial 3 joint is unpaired." [TAO:curator] xref: TAO:0001863 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:35Z @@ -26437,8 +26440,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the left and right premaxillary bones. Inter-premaxillary joint is unpaired." [TAO:curator] xref: TAO:0001950 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:01:59Z @@ -26449,8 +26452,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the contralateral ventral hypohyal bones or the contralateral ceratobranchial cartilages. Inter-ventral hypohyal joint is paired." [TAO:curator] xref: TAO:0001846 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:02:17Z @@ -26461,8 +26464,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the lateral ethmoid and frontal. Lateral ethmoid-frontal joint is paired." [TAO:curator] xref: TAO:0002032 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:02:40Z @@ -26473,8 +26476,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the opercle and interopercle. Opercle-interopercle joint is paired." [TAO:curator] xref: TAO:0001710 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:03:01Z @@ -26485,8 +26488,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the orbitosphenoid cartilage or bone and lateral ethmoid cartilage or bone. Orbitosphenoid-lateral ethmoid joint is paired." [TAO:curator] xref: TAO:0001941 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:03:17Z @@ -26497,8 +26500,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates orbitosphenoid and prootic bones. Orbitosphenoid-prootic joint is paired." [TAO:curator] xref: TAO:0001794 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:03:30Z @@ -26509,8 +26512,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the prootic and exoccipital. Prootic-exoccipital joint is paired." [TAO:curator] xref: TAO:0002034 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:41:27Z @@ -26521,8 +26524,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the prootic and pterosphenoid. Prootic-pterosphenoid joint is paired. The parasphenoid borders the prootic medially in a syndesmosis." [TAO:curator, ZFIN:ZDB-PUB-961014-192] xref: TAO:0002033 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:41:53Z @@ -26533,8 +26536,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the pterosphenoid and orbitosphenoid. Pterosphenoid-orbitosphenoid joint is paired." [TAO:curator] xref: TAO:0001831 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:42:11Z @@ -26546,10 +26549,10 @@ def: "Joint that articulates quadrate and anguloarticular bones. Quadrate-articu synonym: "jaw joint" RELATED [] xref: TAO:0001802 is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0000467 ! anguloarticular relationship: overlaps ZFA:0000621 ! quadrate -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:44:59Z @@ -26560,8 +26563,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates quadrate and hyomandibula bones. Quadrate-hyomandibula joint is paired." [TAO:curator] xref: TAO:0001801 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:45:14Z @@ -26572,8 +26575,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates quadrate and metapterygoid bones. Quadrate-metapterygoid joint is paired." [TAO:curator] xref: TAO:0001803 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:45:27Z @@ -26584,8 +26587,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the ventral hypohyal and urohyal bones. Ventral hypohyal-urohyal joint is paired." [TAO:curator] xref: TAO:0001848 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:46:00Z @@ -26598,8 +26601,8 @@ synonym: "dentary symphysis" EXACT [] synonym: "inter-mandibular joint" EXACT [] xref: TAO:0001851 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-21T04:55:35Z @@ -26609,9 +26612,9 @@ name: endocardial precursor namespace: zebrafish_anatomy def: "Is a portion of tissue part of the heart primordium which will give rise to the endocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:50:10Z @@ -26621,9 +26624,9 @@ name: myocardial precursor namespace: zebrafish_anatomy def: "Portion of tissue that will develop into the myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000027 ! segmentation:20-25 somites relationship: part_of ZFA:0000028 ! heart primordium -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2010-07-21T02:53:48Z @@ -26635,9 +26638,9 @@ def: "Groove that is in the ventral optic cup remnant of the optic fissure." [GO synonym: "optic fissure" RELATED [] is_a: ZFA:0001690 ! groove relationship: develops_from ZFA:0001284 ! optic fissure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2010-07-21T03:00:49Z @@ -26648,8 +26651,8 @@ namespace: zebrafish_anatomy def: "Fossa where the hyomandibula articulates with the sphenotic and prootic to form the hyomandibular-otic region joint." [ZFIN:ZDB-PUB-961014-192] xref: TAO:0002090 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:19:01Z @@ -26661,9 +26664,9 @@ def: "Organ entity that is typically involved in mechanical support and may have xref: TAO:0001890 xref: VSAO:0000128 is_a: ZFA:0000496 ! compound organ -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000434 ! skeletal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:20:29Z @@ -26674,8 +26677,8 @@ namespace: zebrafish_anatomy def: "Surface structure that is a portion of skin that projects or hangs from the body." [TAO:curator] xref: TAO:0001951 is_a: ZFA:0000368 ! integument -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:21:23Z @@ -26686,9 +26689,9 @@ namespace: zebrafish_anatomy def: "Surface structure that is the region of the head in front of and between the orbits, and above the lower jaw. Nares are located on the snout." [TAO:curator] xref: TAO:0001712 is_a: ZFA:0001308 ! organism subdivision -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T11:22:07Z @@ -26699,8 +26702,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the epihyal and ceratohyal bones. Epihyal-ceratohyal joint is paired." [TAO:curator] xref: TAO:0001842 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:32:09Z @@ -26711,8 +26714,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the epihyal and branchiostegal ray bones. Epihyal-branchiostegal ray joint is paired." [TAO:curator] xref: TAO:0001849 is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:32:23Z @@ -26724,9 +26727,9 @@ def: "Fine ridges on surface of scale, often parallel to the circumference of sc synonym: "circuli" EXACT PLURAL [] xref: TAO:0002051 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:33:11Z @@ -26737,8 +26740,8 @@ namespace: zebrafish_anatomy def: "Is a bony partially gas filled sphere located ventral and anterior to the inner ear. The prootic bulla is paired." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0002111 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T02:22:46Z @@ -26751,8 +26754,8 @@ comment: The interopercle ossifies in the interoperculomandibular ligament, whic synonym: "interoperculomandibular ligament" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0001687 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:38:04Z @@ -26763,8 +26766,8 @@ namespace: zebrafish_anatomy def: "Lateral ethmoid-autopalatine ligament is a ligament that connects the lateral ethmoid to the autopalatine." [TAO:curator] xref: TAO:0001944 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:38:20Z @@ -26775,8 +26778,8 @@ namespace: zebrafish_anatomy def: "Lateral ethmoid-ectopterygoid ligament is a ligament that connects the lateral ethmoid to the ectopterygoid." [TAO:curator] xref: TAO:0001685 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T12:38:32Z @@ -26787,8 +26790,8 @@ namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 4 and vertebra 5." [TAO:curator] xref: TAO:0001940 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T01:33:36Z @@ -26799,8 +26802,8 @@ namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses." [TAO:curator] xref: TAO:0002054 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T01:33:50Z @@ -26811,8 +26814,8 @@ namespace: zebrafish_anatomy def: "Joint between the centra, and sometimes the neural arches or parapophyses of vertebra 6 and vertebra 7." [TAO:curator] xref: TAO:0002055 is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-22T01:34:02Z @@ -26823,8 +26826,8 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure composed of connective tissue that surrounds, the internal portions of the olfactory epithelium." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0002035 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T11:47:54Z @@ -26835,8 +26838,8 @@ namespace: zebrafish_anatomy def: "Mental barbel that originates on the chin, in an anteromedial position relative to the outer mental barbel. The inner mental barbel is nearer to the mandibular symphysis than is the outer mental barbel." [TAO:curator] xref: TAO:0001969 is_a: ZFA:0005433 ! mental barbel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:08:04Z @@ -26847,9 +26850,9 @@ namespace: zebrafish_anatomy def: "Anatomical cluster that is the upper roof of the mouth that is roofed by bones such as the parasphenoid, prevomer, metapterygoid, orbitosphenoid." [TAO:curator] xref: TAO:0002093 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000737 ! cranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:10:28Z @@ -26860,8 +26863,8 @@ namespace: zebrafish_anatomy def: "Shallow area that exists on the prootic." [TAO:curator] xref: TAO:0002052 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:30:37Z @@ -26872,8 +26875,8 @@ namespace: zebrafish_anatomy def: "Dermal bone that is ring-shaped or cylindrical and surrounds a sensory canal." [TAO:curator] xref: TAO:0001932 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:32:05Z @@ -26886,8 +26889,8 @@ synonym: "caudal principal lepidotrichium 1 " EXACT [] synonym: "caudal principal ray 1 " EXACT [] xref: TAO:0001713 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:45:32Z @@ -26900,8 +26903,8 @@ synonym: "caudal principal lepidotrichium 3 " EXACT [] synonym: "caudal principal ray 3" EXACT [] xref: TAO:0001715 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:01:02Z @@ -26914,8 +26917,8 @@ synonym: "caudal principal lepidotrichium 2 " EXACT [] synonym: "caudal principal ray 2" EXACT [] xref: TAO:0001714 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T12:57:40Z @@ -26928,8 +26931,8 @@ synonym: "caudal principal lepidotrichium 4 " EXACT [] synonym: "caudal principal ray 4" EXACT [] xref: TAO:0001716 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:01:37Z @@ -26942,8 +26945,8 @@ synonym: "caudal principal lepidotrichium 5" EXACT [] synonym: "caudal principal ray 5" EXACT [] xref: TAO:0001717 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:04Z @@ -26956,8 +26959,8 @@ synonym: "caudal principal lepidotrichium 6" EXACT [] synonym: "caudal principal ray 6" EXACT [] xref: TAO:0001718 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -26970,8 +26973,8 @@ synonym: "caudal principal lepidotrichium 7" EXACT [] synonym: "caudal principal ray 7" EXACT [] xref: TAO:0001719 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -26984,8 +26987,8 @@ synonym: "caudal principal lepidotrichium 8" EXACT [] synonym: "caudal principal ray 8" EXACT [] xref: TAO:0001720 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -26998,8 +27001,8 @@ synonym: "caudal principal lepidotrichium 9" EXACT [] synonym: "caudal principal ray 9" EXACT [] xref: TAO:0001721 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27012,8 +27015,8 @@ synonym: "caudal principal lepidotrichium 10" EXACT [] synonym: "caudal principal ray 10" EXACT [] xref: TAO:0001722 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27026,8 +27029,8 @@ synonym: "caudal principal lepidotrichium 11" EXACT [] synonym: "caudal principal ray 11" EXACT [] xref: TAO:0001723 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27040,8 +27043,8 @@ synonym: "caudal principal lepidotrichium 12" EXACT [] synonym: "caudal principal ray 12" EXACT [] xref: TAO:0001724 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27054,8 +27057,8 @@ synonym: "caudal principal lepidotrichium 14" EXACT [] synonym: "caudal principal ray 14" EXACT [] xref: TAO:0001726 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27068,8 +27071,8 @@ synonym: "caudal principal lepidotrichium 15" EXACT [] synonym: "caudal principal ray 15" EXACT [] xref: TAO:0001727 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27082,8 +27085,8 @@ synonym: "caudal principal lepidotrichium 16" EXACT [] synonym: "caudal principal ray 16" EXACT [] xref: TAO:0001728 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27096,8 +27099,8 @@ synonym: "caudal principal lepidotrichium 17" EXACT [] synonym: "caudal principal ray 17" EXACT [] xref: TAO:0001729 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27110,8 +27113,8 @@ synonym: "caudal principal lepidotrichium 18" EXACT [] synonym: "caudal principal ray 18" EXACT [] xref: TAO:0001730 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27124,8 +27127,8 @@ synonym: "caudal principal lepidotrichium 19" EXACT [] synonym: "caudal principal ray 19" EXACT [] xref: TAO:0001731 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:02:36Z @@ -27136,8 +27139,8 @@ namespace: zebrafish_anatomy def: "Scale that is associated with the lateral line sensory canal." [TAO:curator] xref: TAO:0001824 is_a: ZFA:0000277 ! scale -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:49:27Z @@ -27148,8 +27151,8 @@ namespace: zebrafish_anatomy def: "The bony shelf above orbit is an anatomical cluster formed by the dorsolateral portions of the lateral ethmoid, frontal and sphenotic bones that forms the dorsal margin of the orbit." [TAO:curator] xref: TAO:0001686 is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:52:58Z @@ -27160,8 +27163,8 @@ namespace: zebrafish_anatomy def: "Dermal bone that is located on or subjacent to the surface anywhere on the body and that is not part of the general complement of scales, dermal bone of the dermatocranium, postcranial axial skeleton or paired fin skeleton. Bony plate may exist singly, or as unpaired or paired clusters or series." [TAO:curator] xref: TAO:0002053 is_a: ZFA:0001590 ! dermal bone -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:53:33Z @@ -27172,8 +27175,8 @@ namespace: zebrafish_anatomy def: "Caudal fin lepidotrichium that is distally branched." [TAO:curator] xref: TAO:0002062 is_a: ZFA:0001550 ! caudal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:55:31Z @@ -27184,8 +27187,8 @@ namespace: zebrafish_anatomy def: "Dorsal fin ray that is distally branched." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001785 is_a: ZFA:0001418 ! dorsal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:55:54Z @@ -27197,8 +27200,8 @@ def: "Anal fin lepidotrichium that is distally branched." [TAO:curator] synonym: "anal fin branched ray" EXACT [] xref: TAO:0001992 is_a: ZFA:0001421 ! anal fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-23T01:56:47Z @@ -27209,9 +27212,9 @@ namespace: zebrafish_anatomy def: "Anatomical space between bones of the neurocranium. Frequently closes during development." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001738 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:27:16Z @@ -27222,8 +27225,8 @@ namespace: zebrafish_anatomy def: "Fontanel within the frontal bone near the frontal-sphenotic joint. Lateral fontanel of frontal is paired." [TAO:curator] xref: TAO:0002011 is_a: ZFA:0005536 ! fontanel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:28:46Z @@ -27234,8 +27237,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the first centrum." [TAO:curator] xref: TAO:0001879 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:29:54Z @@ -27246,8 +27249,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the second centrum." [TAO:curator] xref: TAO:0001878 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:06Z @@ -27258,8 +27261,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the third centrum." [TAO:curator] xref: TAO:0001880 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:18Z @@ -27270,8 +27273,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the fourth centrum." [TAO:curator] xref: TAO:0001881 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:34Z @@ -27282,8 +27285,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the fifth centrum." [TAO:curator] xref: TAO:0001751 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:30:51Z @@ -27294,8 +27297,8 @@ namespace: zebrafish_anatomy def: "Rib that articulates with the parapophysis of the sixth centrum." [TAO:curator] xref: TAO:0001750 is_a: ZFA:0000538 ! rib -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-29T06:31:02Z @@ -27307,8 +27310,8 @@ def: "Joint that articulates the hyomandibular cartilage or bone and otic region synonym: "hyomandibula-sphenotic-prootic joint" EXACT [] xref: TAO:0001947 is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:38:51Z @@ -27319,9 +27322,9 @@ namespace: zebrafish_anatomy def: "Actinotrichium that is part of the pectoral fin." [TAO:curator] xref: TAO:0000544 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000943 ! pectoral fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:50:19Z @@ -27332,9 +27335,9 @@ namespace: zebrafish_anatomy def: "Actinotrichium that is part of the pelvic fin." [TAO:curator] xref: TAO:0000596 is_a: ZFA:0005435 ! actinotrichium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001387 ! pelvic fin skeleton -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:50:46Z @@ -27345,8 +27348,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium 1 is the leading or marginal ray of the fin and articulates with the scapula. Lepidotrichium 1 is commonly segmented but unbranched." [TAO:curator] xref: TAO:0001761 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:55:24Z @@ -27357,8 +27360,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the second most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001762 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:58:18Z @@ -27369,8 +27372,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the third most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001763 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:58:24Z @@ -27381,8 +27384,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the sixth most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001766 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:08Z @@ -27393,8 +27396,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the seventh most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001767 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:13Z @@ -27405,8 +27408,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the fifth most anterior pectoral ray , usually branched and segmented." [TAO:curator] xref: TAO:0001765 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:20Z @@ -27417,8 +27420,8 @@ namespace: zebrafish_anatomy def: "Pectoral fin lepidotrichium that, in a linear sequence, is the fourth most anterior pectoral ray, usually branched and segmented." [TAO:curator] xref: TAO:0001764 is_a: ZFA:0001551 ! pectoral fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T10:59:26Z @@ -27429,8 +27432,8 @@ namespace: zebrafish_anatomy def: "First lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001776 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:13:56Z @@ -27441,8 +27444,8 @@ namespace: zebrafish_anatomy def: "Second lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001777 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:15:37Z @@ -27453,8 +27456,8 @@ namespace: zebrafish_anatomy def: "Fourth lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001779 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:15:48Z @@ -27465,8 +27468,8 @@ namespace: zebrafish_anatomy def: "Third lepidotrichium of pelvic fin." [GOC:cvs, ORCiD:0000-0002-2244-7917] xref: TAO:0001778 is_a: ZFA:0001552 ! pelvic fin lepidotrichium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:15:48Z @@ -27477,8 +27480,8 @@ namespace: zebrafish_anatomy def: "Anatomical space that is the concavity containing the eye." [TAO:curator] xref: TAO:0001967 is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-07-30T11:17:20Z @@ -27489,9 +27492,9 @@ namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "angiogenic sprout" RELATED [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2010-09-23T05:54:14Z @@ -27502,8 +27505,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the parasphenoid and basioccipital. Parasphenoid-basioccipital joint is paired." [TAO:curator] xref: TAO:0001832 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-09-24T11:52:49Z @@ -27516,9 +27519,9 @@ synonym: "vitreous body" EXACT [] synonym: "vitreous humor" EXACT [] xref: TAO:0002290 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005567 ! posterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-10T01:16:52Z @@ -27529,9 +27532,9 @@ namespace: zebrafish_anatomy def: "Acellular anatomical structure that is the innermost layer of the optic choroid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070614-11] synonym: "vitreous lamina" EXACT [] is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-10T02:16:43Z @@ -27542,9 +27545,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that composes the opaque fibrous outer layer of the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] xref: TAO:0002289 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2010-11-11T10:53:23Z @@ -27555,9 +27558,9 @@ namespace: zebrafish_anatomy def: "Clear ocular fluid in the anterior segment of the eye. It is produced primarily by dorsal ciliary epithelial cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] xref: TAO:0002288 is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005876 ! anterior chamber eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-11T11:10:25Z @@ -27569,8 +27572,8 @@ def: "A specialized hair cell that has an elongated kinocilium upon which an oto subset: cell_slim xref: CL:0002450 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-11T01:59:44Z @@ -27580,9 +27583,9 @@ name: anterior segment eye namespace: zebrafish_anatomy def: "Anatomical cluster comprising the rostral portion of the eye; the cornea, lens, iris, ciliary zone, anterior chamber, and annular ligament." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-11T05:44:57Z @@ -27592,9 +27595,9 @@ name: posterior segment eye namespace: zebrafish_anatomy def: "Anatomical cluster comprising the caudal portion of the eye: the retina, posterior chamber, optic choroid, and vitreous." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-12T11:52:42Z @@ -27604,9 +27607,9 @@ name: iris blood vessels namespace: zebrafish_anatomy def: "Blood vessels within the stroma of the iris. The vessels cluster and are more dense at the base of the stroma where the iris is thicker." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001079 ! blood vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-12-01T02:00:15Z @@ -27616,9 +27619,9 @@ name: iris stroma namespace: zebrafish_anatomy def: "Portion of the iris which contains bundles of fibers, most of which are oriented radially around the pupil. The stroma is innervated by the iris blood vessels and develops from the periocular mesenchyme." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-12-01T02:28:06Z @@ -27628,9 +27631,9 @@ name: corneo-scleral junction namespace: zebrafish_anatomy def: "The line where the cornea and the sclera meet." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090309-8] is_a: ZFA:0001689 ! anatomical line -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-11-12T03:45:32Z @@ -27640,9 +27643,9 @@ name: ventral canal eye namespace: zebrafish_anatomy def: "Duct present in the angle where the cornea meets the ciliary zone that absorbs the aqueous humor." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0005171 ! duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-11-12T03:51:50Z @@ -27652,8 +27655,8 @@ name: periocular mesenchyme namespace: zebrafish_anatomy def: "Head mesenchyme surrounding the immature eye that gives rise to specialized structures of the anterior segment of the eye." [ZFIN:ZDB-PUB-050701-15] is_a: ZFA:0000113 ! head mesenchyme -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2010-12-02T12:29:18Z @@ -27665,9 +27668,9 @@ def: "Modified or toughened vitreous that suspend the lens at the equator to the synonym: "zonules" EXACT PLURAL [] is_a: ZFA:0001487 ! portion of organism substance relationship: develops_from ZFA:0005561 ! vitreous -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2010-12-02T06:08:45Z @@ -27677,9 +27680,9 @@ name: lens capsule namespace: zebrafish_anatomy def: "The lens capsule is a modified basement membrane that completely surrounds the ocular lens." [GOC:cvs, ORCiD:0000-0002-2244-7917, PMID:18773892] is_a: ZFA:0000382 ! acellular anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2010-12-03T11:36:36Z @@ -27690,9 +27693,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue that are compact accumulations of neurons having roughly similar connections and functions." [GOC:mh, ISBN:0878937420, ORCiD:0000-0001-9114-8737] synonym: "brain nuclei" EXACT PLURAL [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-01-28T05:31:14Z @@ -27702,9 +27705,9 @@ name: ventral thalamus nucleus namespace: zebrafish_anatomy def: "Brain nuclei located in the ventral thalamus." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000458 ! ventral thalamus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-02-24T04:49:33Z @@ -27713,9 +27716,9 @@ id: ZFA:0005577 name: tegmental nucleus namespace: zebrafish_anatomy is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000160 ! tegmentum -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-02-24T04:54:52Z @@ -27725,9 +27728,9 @@ name: spinal nerve root namespace: zebrafish_anatomy def: "The multi-tissue structure that is the beginning of the spinal nerve leaving the spinal cord." [http://en.wikipedia.org/wiki/Nerve_root] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000075 ! spinal cord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-03-04T05:17:42Z @@ -27739,9 +27742,9 @@ def: "Integument ionocyte rich in Na-Cl co-transporter (NCC) activity." [ZFIN:ZD subset: cell_slim synonym: "NCC cell" EXACT [] is_a: ZFA:0005325 ! integument ionocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-03-07T02:03:05Z @@ -27752,9 +27755,9 @@ namespace: zebrafish_anatomy def: "Rostral portion of pars anterior of the adenohypophysis where corticotropes and lactotropes localize." [ZFIN:ZDB-PUB-080616-4] synonym: "rostral pars distalis" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001195 ! pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2011-04-13T11:44:33Z @@ -27765,9 +27768,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of pars anterior of the adenohypophysis where somatotropes, thyrotropes and gonadotropes are localized. The proximal pars anterior has functional homology to the mammalian pars tuberalis, secreting the same hormones." [ZFIN:ZDB-PUB-080616-4] synonym: " proximal pars distalis" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001195 ! pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2011-04-13T02:37:52Z @@ -27777,8 +27780,8 @@ name: dorsal proneural cluster namespace: zebrafish_anatomy def: "Cluster of cells along the edge of the neural plate that have the potential to become neuroblast." [ZFIN:ZDB-PUB-990921-1] is_a: ZFA:0000068 ! proneural cluster -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2011-04-14T02:02:16Z @@ -27788,8 +27791,8 @@ name: ventral proneural cluster namespace: zebrafish_anatomy def: "Cluster of cells along the center of the neural plate that have the potential to become neuroblast." [ZFIN:ZDB-PUB-990921-1] is_a: ZFA:0000068 ! proneural cluster -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2011-04-14T02:02:55Z @@ -27799,8 +27802,8 @@ name: developing mesonephric nephron namespace: zebrafish_anatomy def: "Anatomical cluster which give rise to mature mesonephric nephrons. Zebrafish continously generate new mesonephric nephrons." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005282 ! nephron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T04:10:09Z @@ -27810,11 +27813,11 @@ name: developing mesonephric proximal tubule namespace: zebrafish_anatomy def: "Renal duct that will develop into the mesonephric proximal tubule." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule relationship: part_of ZFA:0005584 ! developing mesonephric nephron relationship: part_of ZFA:0005590 ! capillary loop nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-27T10:55:07Z @@ -27827,8 +27830,8 @@ synonym: "stage I nephron" EXACT [] is_a: ZFA:0001477 ! portion of tissue is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005587 ! nephron progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T04:25:56Z @@ -27838,9 +27841,9 @@ name: nephron progenitor namespace: zebrafish_anatomy def: "Cluster of cells comprising a portion of tissue which gives rise to new mesonephric nephrons. The cluster contains self-renewing stem cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-110131-33] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2011-04-26T04:26:56Z @@ -27851,8 +27854,8 @@ namespace: zebrafish_anatomy def: "Developing nephron with a comma shaped appearance." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-110131-33] is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005586 ! renal vesicle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T04:41:04Z @@ -27864,8 +27867,8 @@ def: "Developing nephron with a tubular morphology that has a renal corpuscle an synonym: "stage II nephron" RELATED [] is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005588 ! comma-shaped body -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T05:07:54Z @@ -27876,8 +27879,8 @@ namespace: zebrafish_anatomy def: "Developing nephron where the developing glomerular capsule has been invaded by a glomerular capillary loop called the glomerular tuft." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005584 ! developing mesonephric nephron relationship: develops_from ZFA:0005589 ! s-shaped body -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-26T05:45:15Z @@ -27887,11 +27890,11 @@ name: developing mesonephric distal tubule namespace: zebrafish_anatomy def: "Renal duct that will develop into the mesonephric distal tubule." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0005289 ! renal duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001287 ! renal tubule relationship: part_of ZFA:0005584 ! developing mesonephric nephron relationship: part_of ZFA:0005590 ! capillary loop nephron -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-27T10:55:41Z @@ -27903,8 +27906,8 @@ def: "A branched nephron of the mature kidney." [ZFIN:ZDB-PUB-110131-33] synonym: "stage IV nephron" EXACT [] is_a: ZFA:0005282 ! nephron relationship: develops_from ZFA:0005584 ! developing mesonephric nephron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2011-04-27T12:15:19Z @@ -27914,9 +27917,9 @@ name: neuraxis flexure namespace: zebrafish_anatomy def: "An anatomical structure that is regional part of the central nervous system where there is a significant bend of the axis." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-05-02T01:03:43Z @@ -27927,8 +27930,8 @@ namespace: zebrafish_anatomy def: "Non-material anatomical entity of two dimensions, that is demarcated by anatomical lines or points on the external or internal surfaces of anatomical structures." [CARO:MAH, ORCiD:0000-0001-9114-8737] xref: CARO:0000010 is_a: ZFA:0100000 ! zebrafish anatomical entity -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ZFIN creation_date: 2011-03-22T10:34:12Z @@ -27941,8 +27944,8 @@ synonym: "caudal principal lepidotrichium 13" EXACT [] synonym: "caudal principal ray 13" EXACT [] xref: TAO:0001725 is_a: ZFA:0001585 ! caudal fin principal ray -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-04T02:44:32Z @@ -27954,8 +27957,8 @@ def: "Fin that is one of a pair located ventrally on the organism." [TAO:curator xref: TAO:0002278 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0001383 ! fin bud -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-11-11T11:22:21Z @@ -27967,8 +27970,8 @@ def: "Fin that is an unpaired fin located in the sagittal plane of the organism. xref: TAO:0002276 is_a: ZFA:0000108 ! fin relationship: develops_from ZFA:0000040 ! median fin fold -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-11T11:33:02Z @@ -27983,9 +27986,9 @@ subset: cell_slim synonym: "pancreatic E cell" EXACT [] xref: CL:0005019 is_a: ZFA:0005599 ! ghrelin secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001249 ! exocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-17T01:02:01Z @@ -27998,8 +28001,8 @@ def: "A cell that secretes ghrelin, the peptide hormone that stimulates hunger." subset: cell_slim xref: CL:0005018 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-17T01:03:24Z @@ -28009,10 +28012,10 @@ name: sinoatrial region namespace: zebrafish_anatomy def: "Region at venious pole of heart tube that initiates heart beat." [ZFIN:ZDB-PUB-101115-23] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000360 ! heart tube relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2011-11-22T04:14:44Z @@ -28023,10 +28026,10 @@ namespace: zebrafish_anatomy def: "Ring of cardiac conduction tissue around the sinoatrial region of the heart tube that performs pacemaker function." [ZFIN:ZDB-PUB-101115-23] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005600 ! sinoatrial region -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000114 ! heart relationship: part_of ZFA:0005063 ! cardiac conduction system -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2011-11-22T04:16:19Z @@ -28036,8 +28039,8 @@ name: supraneural 10 namespace: zebrafish_anatomy def: "Supraneural located posterior to supraneural 9. This supraneural does not appear in most specimens." [ZFIN:ZDB-PUB-031103-13] is_a: ZFA:0001397 ! post-Weberian supraneural -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: jonknight creation_date: 2011-12-05T12:56:49Z @@ -28047,8 +28050,8 @@ name: lymphangiogenic sprout namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new lymph vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100719-62] is_a: ZFA:0005559 ! vascular sprouts -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-12-27T12:39:43Z @@ -28058,8 +28061,8 @@ name: angiogenic sprout namespace: zebrafish_anatomy def: "Portion of vessel wall that extends to form a new blood vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005559 ! vascular sprouts -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2011-12-27T12:41:09Z @@ -28071,8 +28074,8 @@ def: "The primordial vasculature that will develop into lymph vessels. The lymp synonym: "parachordal lymphangioblast string" EXACT [ZFIN:ZDB-PUB-110613-5] is_a: ZFA:0005076 ! primordial vasculature relationship: develops_from ZFA:0000477 ! posterior cardinal vein -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2011-12-27T12:45:30Z @@ -28086,9 +28089,9 @@ synonym: "calvaria" EXACT PLURAL [] synonym: "calvarium" EXACT [] synonym: "skullcap" RELATED [] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T12:33:01Z @@ -28100,9 +28103,9 @@ def: "Fibrous joint connecting the parietal bones." [GOC:cvs, ORCiD:0000-0002-22 synonym: "sagittal suture" RELATED [] xref: TAO:0005245 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T02:35:47Z @@ -28114,9 +28117,9 @@ def: "Fibrous joint connecting the frontal bone to the parietal bone. This join synonym: "coronal suture" RELATED [] xref: TAO:0005255 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T02:37:39Z @@ -28128,9 +28131,9 @@ def: "Fibrous joint connecting the supraoccipital to the parietal bone." [GOC:cv synonym: "lamdoid suture" RELATED [ZFIN:ZDB-PUB-060323-12] xref: TAO:0005264 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005606 ! cranial vault -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T02:48:16Z @@ -28140,8 +28143,8 @@ name: synostosis namespace: zebrafish_anatomy def: "Joint in which the articulating bones are connected by bone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:09:13Z @@ -28152,8 +28155,8 @@ namespace: zebrafish_anatomy def: "Synostosis where the entopterygoid meets the quadrate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "ectopterygoid-quadrate synostosis" EXACT [] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:28:11Z @@ -28164,8 +28167,8 @@ namespace: zebrafish_anatomy def: "Synostosis where the ectopterygoid meets the entopterygoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "ectopterygoid-entopterygoid synostosis" EXACT [] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:31:09Z @@ -28175,8 +28178,8 @@ name: basioccipital-prootic joint namespace: zebrafish_anatomy def: "Synchondrosis where the basioccipital meets the prootic anteriorly." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-31T03:48:07Z @@ -28187,8 +28190,8 @@ namespace: zebrafish_anatomy def: "Synostosis where the entopterygoid meets the metapterygoid. The metapterygoid has an anterodorsally projecting spine that meets the entopterygoid medially in a synostosis at its posteromedial edge." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "entopterygoid-metapterygoid synostosis" EXACT [] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:45:11Z @@ -28198,8 +28201,8 @@ name: metapterygoid-symplectic fenestra namespace: zebrafish_anatomy def: "Opening formed between the ventral border of the metapterygoid and the dorsal border of the symplectic." [ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:53:50Z @@ -28209,8 +28212,8 @@ name: quadrate-entopterygoid joint namespace: zebrafish_anatomy def: "Synchondrosis where the quadrate meets the entopterygoid dorsally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-30T03:57:23Z @@ -28220,8 +28223,8 @@ name: lateral ethmoid-supraethmoid namespace: zebrafish_anatomy def: "Synostosis where anteromedial extensions of the lateral ethmoid project to meet the supraethmoid dorsally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T11:27:00Z @@ -28231,8 +28234,8 @@ name: anguloarticular-retroarticular joint namespace: zebrafish_anatomy def: "Cartilaginous joint that articulates the anguloarticular posteroventrally with the retroarticular." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005155 ! cartilaginous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T11:51:45Z @@ -28243,9 +28246,9 @@ namespace: zebrafish_anatomy def: "Connective tissue that functions in mechanical and structural support." [VSAO:curator] xref: VSAO:0000015 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000434 ! skeletal system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T03:59:26Z @@ -28256,8 +28259,8 @@ namespace: zebrafish_anatomy def: "A skeletal element that has the potential to participate in endochondral ossification, and may participate in intramembranous ossification." [VSAO:curator] xref: VSAO:0000139 is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T02:36:59Z @@ -28268,8 +28271,8 @@ namespace: zebrafish_anatomy def: "Skeletal tissue with a collagen-rich extracellular matrix vascularized, mineralized with hydroxyapatite and typically including osteocytes located in lacunae that communicate with one another by cell processes (in canaliculi). Bone is deposited by osteoblasts." [VSAO:curator] xref: VSAO:0000047 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T04:00:34Z @@ -28280,8 +28283,8 @@ namespace: zebrafish_anatomy def: "Skeletal tissue that is avascular, rich in glycosaminoglycans (GAGs) and typically includes chondrocytes within isolated lacunae. Cartilage tissue is deposited by chondroblasts." [VSAO:curator] xref: VSAO:0000040 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T04:01:46Z @@ -28292,8 +28295,8 @@ namespace: zebrafish_anatomy def: "Skeletal tissue that is part of the exoskeleton and derived from an odontogenic papilla." [VSAO:curator] xref: VSAO:0000063 is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-02-09T04:05:11Z @@ -28303,8 +28306,8 @@ name: replacement element namespace: zebrafish_anatomy def: "Skeletal element that forms as a replacement or substitution of another element or tissue." [TAO:curator] is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-14T12:37:44Z @@ -28316,8 +28319,8 @@ def: "Space enclosed by the trabeculae cranii. The anterior tip of the notochor synonym: "hypophyseal fenestrae" EXACT PLURAL [] xref: TAO:0005269 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2012-03-15T03:52:38Z @@ -28328,8 +28331,8 @@ namespace: zebrafish_anatomy def: "Synovial joint that articulates the hyomandibula and the opercle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0005265 is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:19:50Z @@ -28339,8 +28342,8 @@ name: hyomandibula-pterotic joint namespace: zebrafish_anatomy def: "Synovial joint that articulates the hyomandibula with the pterotic." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:14:40Z @@ -28352,8 +28355,8 @@ def: "Fossa where the exoccipital forms the medial portion and the epioccipital synonym: "temporal fossa" EXACT [] xref: TAO:0001753 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:23:27Z @@ -28367,8 +28370,8 @@ synonym: "facial nerve foramen" EXACT [ZFIN:ZDB-PUB-961014-192] synonym: "hyosymplectic foramen" EXACT [ZFIN:ZDB-PUB-961014-192] xref: TAO:0005275 is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:32:30Z @@ -28379,8 +28382,8 @@ namespace: zebrafish_anatomy def: "Fossa on the pterotic where the hyomandibula articulates." [ZFIN:ZDB-PUB-961014-192] xref: TAO:0005266 is_a: ZFA:0005388 ! fossa -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-15T04:35:40Z @@ -28391,8 +28394,8 @@ namespace: zebrafish_anatomy def: "Fibrous joint that articulates the posterior edge of the preopercle horizontal limb with the symplectic." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0005268 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-20T05:02:00Z @@ -28403,8 +28406,8 @@ namespace: zebrafish_anatomy def: "Fibrous joint that articulates the anterior edge of the preopercle vertical limb and the hyomandibula." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] xref: TAO:0005278 is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-03-20T05:04:12Z @@ -28414,10 +28417,10 @@ name: lepidotrichium segment namespace: zebrafish_anatomy def: "Skeletal element which is part of lepidotrichium articulating with other lepidotrichium segments by lepidotrichium joints." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005494 ! skeletal element -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: overlaps ZFA:0005634 ! lepidotrichium joint relationship: part_of ZFA:0001554 ! lepidotrichium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-06T02:21:01Z @@ -28428,9 +28431,9 @@ namespace: zebrafish_anatomy def: "Joint that articulates segments of the fin ray." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-000803-4] synonym: "intra-ray joint" EXACT [] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001554 ! lepidotrichium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-06T02:22:29Z @@ -28442,8 +28445,8 @@ def: "Odontoid tissue formed of a loose matrix of collagen. The fibrils of the synonym: "pre-dentine" EXACT [] synonym: "predentin" EXACT [] is_a: ZFA:0005623 ! odontoid tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-19T02:42:59Z @@ -28453,9 +28456,9 @@ name: interossicular ligament namespace: zebrafish_anatomy def: "Ligament that connects the intercalarium to the anterior process of the tripus and the scaphium." [ZFIN:ZDB-PUB-031103-13, ZFIN:ZDB-PUB-120214-1] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001188 ! Weberian apparatus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-19T04:04:31Z @@ -28466,8 +28469,8 @@ namespace: zebrafish_anatomy def: "Ligament that connects one rib to another." [TAO:curator] xref: TAO:0001972 is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-19T04:20:23Z @@ -28479,8 +28482,8 @@ def: "Ligaments that runs from the parapophyses of the anteriormost centrum to t synonym: "Baudelot's ligaments" EXACT [] synonym: "scapulo-vertebral ligaments" EXACT PLURAL [] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T12:23:51Z @@ -28491,8 +28494,8 @@ namespace: zebrafish_anatomy def: "Ligament that runs from the ventral third of the supracleithrum to the exoccipital." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "Baudelot's ligament" EXACT [] is_a: ZFA:0005638 ! scapulo-vertebral ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T12:25:49Z @@ -28503,8 +28506,8 @@ namespace: zebrafish_anatomy def: "Ligament that run from the dorsal tip of the cleithrum to the exoccipital." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "Baudelot's ligament" EXACT [] is_a: ZFA:0005638 ! scapulo-vertebral ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T12:26:31Z @@ -28514,8 +28517,8 @@ name: maxillo-mandibular ligament namespace: zebrafish_anatomy def: "Ligament that connects the dentary to the maxilla." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:00:12Z @@ -28525,8 +28528,8 @@ name: maxillo-rostroid ligament namespace: zebrafish_anatomy def: "Ligament that connects the rostral process of the maxilla to the kinethmoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:00:52Z @@ -28536,8 +28539,8 @@ name: premaxillo-rostroid ligament namespace: zebrafish_anatomy def: "Ligament that, in the adult, attaches the premaxilla to its counterpart at the midline and the kinethmoid posterodorsally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:03:14Z @@ -28547,8 +28550,8 @@ name: ceratobranchial 5 ligament namespace: zebrafish_anatomy def: "The ligament that connects the anteroventral tips of ceratobranchials 5 medially." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:03:58Z @@ -28558,8 +28561,8 @@ name: supracleithrum-intercalar ligament namespace: zebrafish_anatomy def: "Short ligament that runs from the hooked anterior end of the supracleithrum to the intercalar." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:04:45Z @@ -28569,8 +28572,8 @@ name: preopercle-retroarticular ligament namespace: zebrafish_anatomy def: "Ligament that connects the preopercle to the retroarticular anteroventrally." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T01:05:19Z @@ -28581,8 +28584,8 @@ namespace: zebrafish_anatomy def: "Dense regular connective tissue that connects muscle to bone." [VSAO:curator] xref: VSAO:0000073 is_a: ZFA:0001632 ! portion of connective tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T02:02:48Z @@ -28593,8 +28596,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the mesethmoid and lateral ethmoid. Mesethmoid-lateral ethmoid joint is paired." [TAO:curator, ZFIN:ZDB-PUB-961014-192] xref: TAO:0001679 is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T05:24:57Z @@ -28605,8 +28608,8 @@ namespace: zebrafish_anatomy def: "Joint that articulates the mesethmoid and vomer. Mesethmoid-vomer joint is unpaired." [TAO:curator] xref: TAO:0001680 is_a: ZFA:0005610 ! synostosis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-04-24T05:26:11Z @@ -28616,9 +28619,9 @@ name: primitive pectoral fin adductor namespace: zebrafish_anatomy def: "Adductor that originates at the cleithrum the muscle fibers run in sheets along the endoskeletal disk extending dorsally and caudally from its base. Distally, the muscles insert onto the fin membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050920-7] is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2012-05-08T03:51:06Z @@ -28628,8 +28631,8 @@ name: primitive pectoral fin abductor namespace: zebrafish_anatomy def: "Abductor that originates at the cleithrum the muscle fibers run in sheets along the endoskeletal disk extending dorsally and caudally from its base. Distally, the muscles insert onto the fin membrane." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050920-7] is_a: ZFA:0005269 ! abductor muscle -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-05-08T03:59:41Z @@ -28640,8 +28643,8 @@ namespace: zebrafish_anatomy def: "Layers of broad flat tendons." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "aponeuroses" EXACT PLURAL [] is_a: ZFA:0005647 ! tendon -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-06-15T10:41:21Z @@ -28652,9 +28655,9 @@ namespace: zebrafish_anatomy def: "Portion of tissue in the vagal lobe that contains GABAergic sensory interneurons." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120409-2] is_a: ZFA:0000297 ! vagal lobe is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001101 ! gustatory system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-07-03T01:25:32Z @@ -28664,9 +28667,9 @@ name: blood plasma namespace: zebrafish_anatomy def: "Portion of organism substance that is the liquid matrix of blood." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000007 ! blood -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-09-25T10:30:55Z @@ -28676,9 +28679,9 @@ name: anterior ventromedial process of autopalatine namespace: zebrafish_anatomy def: "Endochondral process of the autopalatine that forms the socket of the autopalatine-preethmoid joint." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001637 ! bony projection -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000620 ! autopalatine -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2012-09-25T03:42:27Z @@ -28688,8 +28691,8 @@ name: autopalatine-preethmoid joint namespace: zebrafish_anatomy def: "Synovial, ball and socket joint that articulates the autopalatine and the preethmoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005153 ! synovial joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-09-25T03:47:27Z @@ -28699,9 +28702,9 @@ name: anterior lateral process of autopalatine namespace: zebrafish_anatomy def: "Endochondral bone part of autopalatine that extends towards the first infraorbital." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0001637 ! bony projection -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000620 ! autopalatine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-09-25T03:55:15Z @@ -28711,9 +28714,9 @@ name: lymph namespace: zebrafish_anatomy def: "Portion of organism substance found in the lymphatic system. Lymph usually consists of interstitial fluid that has made its way into the lymphatic system." [GOC:cvs, ORCiD:0000-0002-2244-7917, UBERON:curator] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000385 ! lymphatic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-11-28T03:32:48Z @@ -28723,9 +28726,9 @@ name: intestinal lamina propria mucosa namespace: zebrafish_anatomy def: "Thin layer of loose connective tissue which lies beneath the intestinal epithelium. The intestinal lamina propria is less complex then the corresponding mammalian tissue." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050120-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005660 ! intestinal mucosa -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-07T12:15:28Z @@ -28735,9 +28738,9 @@ name: intestinal mucosa namespace: zebrafish_anatomy def: "Multi-tissue structure of the intestine comprising of the intestinal epithelium and the intestinal lamina propria mucosa." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050120-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-07T12:18:22Z @@ -28748,9 +28751,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the olfactory bulb that is roughly spheroidal and encircled by olfactory sensory neuron axons that formed an anatomically distinct stalk connected to the olfactory nerve." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-03-19T02:15:11Z @@ -28760,9 +28763,9 @@ name: spinal nerve namespace: zebrafish_anatomy def: "Bilaterally-paired nerve connecting each segment of the spinal cord to the limbs and organs." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] is_a: ZFA:0007009 ! nerve -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:04:36Z @@ -28773,8 +28776,8 @@ namespace: zebrafish_anatomy def: "Dorsal branch of the spinal nerve, coursing dorsally and caudally between the muscle and the vertebrae. It remains in the center of the muscle segment and could be followed to the dorsal aspect of the muscle. MiP primary motoneuron axons extend in this branch." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] synonym: "dorsal nerve" EXACT [] is_a: ZFA:0005662 ! spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:08:16Z @@ -28785,8 +28788,8 @@ namespace: zebrafish_anatomy def: "Ventral branch of the spinal nerve that projects toward the lateral surface of the myotome, initially extending parallel to the horizontal myoseptum. RoP primary motoneuron axons extend in this branch." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] synonym: "lateral nerve" EXACT [] is_a: ZFA:0005662 ! spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:09:27Z @@ -28797,8 +28800,8 @@ namespace: zebrafish_anatomy def: "Ventral spinal nerve branch that projects to the ventral myotome. The axon of the CaP primary motoneuron extends in this branch." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247] synonym: "ventral nerve" EXACT [] is_a: ZFA:0005662 ! spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:11:19Z @@ -28808,8 +28811,8 @@ name: ventral spinal nerve septal branch namespace: zebrafish_anatomy def: "Ventral spinal nerve sub-branch that runs near the rostral end of the myotome near the vertical myoseptum." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1247] is_a: ZFA:0005665 ! ventral spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:13:53Z @@ -28819,8 +28822,8 @@ name: ventral spinal nerve median branch namespace: zebrafish_anatomy def: "Ventral spinal nerve sub-branch that projects ventrally in the rostro-caudal center of the myotome. The axon of the CaP primary motoneuron extends in this branch." [ZFIN:ZDB-PUB-961014-1247, ZFIN:ZDB-PUB-961014-814] is_a: ZFA:0005665 ! ventral spinal nerve -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-19T04:14:46Z @@ -28831,9 +28834,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure part of the olfactory bulb comprised of ciliated and microvillous olfactory sensory neurons projections that form specialized neuropilar regions comprised of olfactory sensor axons and the dendrites of olfactory bulb neurons." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120330-2] synonym: "glomerular precursors" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T11:55:43Z @@ -28844,9 +28847,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. The neurons composing lateral protoglomeruli respond to amino acid stimuli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "lateral protoglomeruli" EXACT PLURAL [] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T01:58:36Z @@ -28856,9 +28859,9 @@ name: central zone protoglomerulus namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:06:50Z @@ -28868,9 +28871,9 @@ name: medial protoglomerulus namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Mediates the signals produced in response to bile acids." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:10:49Z @@ -28881,8 +28884,8 @@ namespace: zebrafish_anatomy def: "Single large glomerulus located in the ventral posterior region of the maturing glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "VPG" RELATED [] is_a: ZFA:0005668 ! olfactory bulb protoglomerulus -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:17:00Z @@ -28892,9 +28895,9 @@ name: central zone olfactory bulb namespace: zebrafish_anatomy def: "Central region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:25:20Z @@ -28904,9 +28907,9 @@ name: dorsal zone olfactory bulb namespace: zebrafish_anatomy def: "Dorsal region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:26:28Z @@ -28916,9 +28919,9 @@ name: lateral zone olfactory bulb namespace: zebrafish_anatomy def: "Lateral region of the glomerular layer of the olfactory bulb. The lateral region of the olfactory bulb consisted of morphologically diverse glomeruli and a diffuse aggregate of OSN axons, the lateral plexus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:27:13Z @@ -28928,9 +28931,9 @@ name: medial zone olfactory bulb namespace: zebrafish_anatomy def: "Medial region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-04-29T02:28:47Z @@ -28940,9 +28943,9 @@ name: ventral zone olfactory bulb namespace: zebrafish_anatomy def: "Ventral region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000357 ! glomerular layer -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-04-29T02:29:39Z @@ -28952,9 +28955,9 @@ name: dorsolateral zone olfactory bulb namespace: zebrafish_anatomy def: "Lateral region of the dorsal zone of the olfactory bulb. Glomeruli in this zone are tightly clustered in both male and female fish." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050523-2, ZFIN:ZDB-PUB-101222-42, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005674 ! dorsal zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-06T04:46:27Z @@ -28964,9 +28967,9 @@ name: ventromedial zone olfactory bulb namespace: zebrafish_anatomy def: "Medial portion of the ventral region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005677 ! ventral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T09:59:45Z @@ -28977,9 +28980,9 @@ namespace: zebrafish_anatomy def: "Anterior portion of the ventral region of the glomerular layer of the olfactory bulb. In the ventroanterior zone there are typically seven small glomeruli located 11-20 micrometers beneath the superficial axon bundles The ganglion differed conspicuously in sizes, shapes, and distribution, and were not individually identifiable." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "vaGx" RELATED [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005677 ! ventral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T10:03:15Z @@ -28989,9 +28992,9 @@ name: ventroposterior zone olfactory bulb namespace: zebrafish_anatomy def: "Posterior portion of the ventral region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005677 ! ventral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T10:22:38Z @@ -29001,9 +29004,9 @@ name: mediodorsal zone of the olfactory bulb namespace: zebrafish_anatomy def: "Dorsal part of the medial region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T01:37:59Z @@ -29014,9 +29017,9 @@ namespace: zebrafish_anatomy def: "Anterior portion of the medial region of the glomerular layer of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "medial anterior zone olfactory bulb" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T01:39:48Z @@ -29027,9 +29030,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located between ventromedial and medial olfactory bulb surfaces. The mpG is generally elongated and innervated by a single thick axon." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050523-2, ZFIN:ZDB-PUB-961014-62] synonym: "mpG" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-07T01:48:45Z @@ -29040,9 +29043,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsal zone of the olfactory bulb. It is located in a stereotypic position near the posterior edge of the dorsal glomerular zone and stains with anti-calretinin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsal glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005674 ! dorsal zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:25:26Z @@ -29053,9 +29056,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Dorsalmost of glomeruli located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:34:12Z @@ -29066,9 +29069,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG1 and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:38:24Z @@ -29079,9 +29082,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG2 and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:40:59Z @@ -29092,9 +29095,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG3 and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 4" RELATED [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:42:35Z @@ -29105,9 +29108,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the dorsolateral zone of the olfactory bulb. Ventral to dlG4, and located along the caudal edge of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "dorsolateral glomerulus 5" RELATED [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005678 ! dorsolateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T02:45:36Z @@ -29119,9 +29122,9 @@ def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Stains synonym: "ventral triplet glomerulus 1" EXACT [] synonym: "ventromedial glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:10:31Z @@ -29133,9 +29136,9 @@ def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Stains synonym: "ventral triplet glomerulus 2" EXACT [] synonym: "ventromedial glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:17:25Z @@ -29147,9 +29150,9 @@ def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Stains synonym: "ventral triplet glomerulus 3" EXACT [] synonym: "ventromedial glomerulus 3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:19:23Z @@ -29160,9 +29163,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Posterior to the triplet of ventromedial glomeruli strongly expressing calretinin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 4" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:24:43Z @@ -29173,9 +29176,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Posterior to vmG4." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 5" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:26:20Z @@ -29186,9 +29189,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. Posterior to vmG4 adjacent to vmG5." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 6" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:27:26Z @@ -29199,9 +29202,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the ventromedial zone of the olfactory bulb. vmG7 is located anteriorly to vmG1-3 and vmG4-6." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerulus 7" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:31:32Z @@ -29212,9 +29215,9 @@ namespace: zebrafish_anatomy def: "Group of glomerulus located in the ventromedial zone of the olfactory bulb The vmGx group, is located 10-50 micrometers from the ventral surface of the olfactory bulb. And were located anywhere between the posteroventral and anteroventral regions of the olfactory bulb. It was not possible to unambiguously identify the vmGx because they displayed varying distributions and numbers in the olfactory bulbs of different animals." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerular group x" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:34:17Z @@ -29225,9 +29228,9 @@ namespace: zebrafish_anatomy def: "Group of glomerulus located in the ventromedial zone of the olfactory bulb. A cluster of comparatively small glomeruli located near the midline between the two olfactory bulbs The glomeruli in the vmGy were among the smallest glomeruli in the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventromedial glomerular group y" EXACT [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005679 ! ventromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:37:11Z @@ -29238,9 +29241,9 @@ namespace: zebrafish_anatomy def: "One of two large glomeruli located in the medial side of the ventroposterior zone olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventroposterior glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005681 ! ventroposterior zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:46:05Z @@ -29251,9 +29254,9 @@ namespace: zebrafish_anatomy def: "One of two large glomeruli located in the lateral side of the ventroposterior zone olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "ventroposterior glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005681 ! ventroposterior zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T03:47:52Z @@ -29265,9 +29268,9 @@ def: "Glomerulus located in the lateral zone of the olfactory bulb. LG1 is surro synonym: "glomerulus 1 of the lateral chain" EXACT [] synonym: "lateral glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T04:11:01Z @@ -29280,9 +29283,9 @@ synonym: "glomerulus 2 of the lateral chain" EXACT [] synonym: "lateral glomerulus 2" EXACT [] synonym: "lcG2 " EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T04:15:43Z @@ -29295,9 +29298,9 @@ synonym: "glomerulus 3 of the lateral chain" EXACT [] synonym: "lateral glomerulus 3" EXACT [] synonym: "lcG3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-21T04:18:03Z @@ -29310,9 +29313,9 @@ synonym: "glomerulus 4 of the lateral chain" EXACT [] synonym: "lateral glomerulus 4" EXACT [] synonym: "lcG4" RELATED [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:07:13Z @@ -29325,9 +29328,9 @@ synonym: "glomerulus 5 of the lateral chain" EXACT [] synonym: "lateral glomerulus 5" RELATED [] synonym: "lcG5 " EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:11:41Z @@ -29337,9 +29340,9 @@ name: lGx namespace: zebrafish_anatomy def: "Group of glomerulus located in the lateral region of the olfactory bulb. The glomeruli that compose lGx are smaller than the lG1-6 and varied in shape, sizes, and locations between olfactory bulbs of the same and different animals. The lGx were located either along the ventral edge of the lateral group or below the lateral olfactory bulb surface." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:16:21Z @@ -29351,9 +29354,9 @@ def: "Glomerulus located in the lateral zone of the olfactory bulb. LG6 is locat synonym: "lateral glomerulus 6" EXACT [] synonym: "lvpG" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:19:31Z @@ -29366,9 +29369,9 @@ synonym: "mdpG1" EXACT [] synonym: "mediodorsal glomerulus 1" EXACT [] synonym: "mediodorsal posterior glomerulus 1 " EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:49:49Z @@ -29381,9 +29384,9 @@ synonym: "mdpG2 " EXACT [] synonym: "mediodorsal glomerulus 2" EXACT [] synonym: "mediodorsal posterior glomerulus 2" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:53:33Z @@ -29394,9 +29397,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. Glomerulus that lies ventral to mdG2 on the caudal edge of the mediodorsal glomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 3" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:54:46Z @@ -29407,9 +29410,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. Positioned between mdG2 and mdG5 on the dorsal edge of the medial dorsal glomerular cluster." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 4" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:56:36Z @@ -29420,9 +29423,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. . This glomerulus expresses a protein that cross reacts with antibodies raised against GNAO1. It is the dorsal to mdG6 on the rostral edge of the mediodorsal cluster." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 5" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:57:20Z @@ -29433,9 +29436,9 @@ namespace: zebrafish_anatomy def: "Glomerulus located in the mediodorsal zone of the olfactory bulb. This glomerulus is the most ventral glomerulus in the mediodorsal cluster." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "mediodorsal glomerulus 6" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005682 ! mediodorsal zone of the olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T11:58:01Z @@ -29447,9 +29450,9 @@ def: "Glomerulus located in the anteromedial zone of the olfactory bulb." [GOC: synonym: "maG" RELATED [] synonym: "medial anterior glomerulus 1" EXACT [] is_a: ZFA:0005661 ! olfactory bulb glomerulus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005683 ! anteromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T12:02:52Z @@ -29460,9 +29463,9 @@ namespace: zebrafish_anatomy def: "Group of small glomeruli located in the anteromedial zone of the olfactory bulb. The arrangements of glomeruli maGx varies between animals and they can't be identified as individual units." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120516-14] synonym: "medial anterior glomeruli " RELATED [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005683 ! anteromedial zone olfactory bulb -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-05-22T12:04:40Z @@ -29473,9 +29476,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Dorsolateral protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG1" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T03:52:20Z @@ -29486,9 +29489,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Ventromedial protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG2" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:06:52Z @@ -29499,9 +29502,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Dorsomedial protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG3" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:08:18Z @@ -29512,9 +29515,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the lateral region of the glomerular layer of the olfactory bulb. Ventrolateral protoglomerulus located in the lateral region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "LG4" RELATED [] is_a: ZFA:0005669 ! lateral protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005675 ! lateral zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T04:08:37Z @@ -29525,9 +29528,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Most lateral protoglomerulus in the central zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ1" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:13:36Z @@ -29538,9 +29541,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 1." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ2" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:20:35Z @@ -29551,9 +29554,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 2." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ3" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:21:01Z @@ -29564,9 +29567,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Located medially to protoglomerulus 3." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ4" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:35:43Z @@ -29577,9 +29580,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the central zone of the glomerular layer of the olfactory bulb. The central zone protoglomeruli have somewhat indistinct boundaries. Most medial protoglomerulus in the central zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-980729-35] synonym: "CZ5" EXACT [] is_a: ZFA:0005670 ! central zone protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005673 ! central zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:36:02Z @@ -29590,9 +29593,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most posterio-lateral of the medial protoglomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG1 " RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:39:34Z @@ -29603,9 +29606,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most dorsally located medial protoglomerulus and medial to protoglomerulus 1." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG2" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:18Z @@ -29616,9 +29619,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Located between medial glomerulus 2 and medial glomerulus 4 along dorsal-ventral axis of the medial region of the olfactory bulb." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG3" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:38Z @@ -29629,9 +29632,9 @@ namespace: zebrafish_anatomy def: "Protoglomeruli in the medial region of the glomerular layer of the olfactory bulb. Most ventral of the medial protoglomeruli." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050617-6, ZFIN:ZDB-PUB-980729-35] synonym: "MG4" RELATED [] is_a: ZFA:0005671 ! medial protoglomerulus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005676 ! medial zone olfactory bulb -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-05-22T05:42:57Z @@ -29644,9 +29647,9 @@ subset: cell_slim synonym: "cranial motoneuron" EXACT [] xref: CL:0015000 is_a: ZFA:0009052 ! motor neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:04:57Z @@ -29660,8 +29663,8 @@ synonym: "branchi motor neuron" EXACT [] synonym: "special visceral motor neuron" EXACT [] xref: CL:0005023 is_a: ZFA:0005730 ! cranial motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:06:26Z @@ -29674,9 +29677,9 @@ subset: cell_slim synonym: "general visceral motor neuron" EXACT [] xref: CL:0005025 is_a: ZFA:0005730 ! cranial motor neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:08:10Z @@ -29688,10 +29691,10 @@ def: "Cranial motor neurons found in the midbrain and hindbrain that innervates subset: cell_slim xref: CL:0005024 is_a: ZFA:0005730 ! cranial motor neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-06-20T02:09:35Z @@ -29701,10 +29704,10 @@ name: lacunocanalicular system namespace: zebrafish_anatomy def: "A system of osteocytes connected through canals within the vertebra. Osteocytes extend processes through canals within ossified bone. The lacunocanalicular system is poorly developed in zebrafish with most osteocytes having one or two cytoplasmic processes." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-22629-14] is_a: ZFA:0001439 ! anatomical system -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001189 ! vertebra relationship: part_of ZFA:0005621 ! bone tissue -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T11:48:50Z @@ -29714,9 +29717,9 @@ name: lacunocanalicular canal namespace: zebrafish_anatomy def: "Anatomical space, part of the lacunocanalicular system that connects lacuna within bone tissue allowing osteocyte projections to connect." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-11518-14] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T12:10:17Z @@ -29726,9 +29729,9 @@ name: lacuna namespace: zebrafish_anatomy def: "Anatomical space a small cavity, in the matrix of bone tissue. Part of the lacunocanalicular system." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-08T12:19:22Z @@ -29741,8 +29744,8 @@ synonym: "endodermal rod" RELATED [ZFIN:ZDB-PUB-030115-26] synonym: "intestinal anlage" RELATED [ZFIN:ZDB-PUB-050120-6.] is_a: ZFA:0001488 ! multi-tissue structure relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Ceri creation_date: 2013-07-23T03:03:23Z @@ -29753,8 +29756,8 @@ namespace: zebrafish_anatomy def: "Portion of the intestinal rod that loops to left between 26-30hpf and gives rise to the intestinal bulb and liver and anterior pancreatic primordium. The endoderm at this stage is a compact mass of cells with little to no polarization." [ZFIN:ZDB-PUB-031103-19] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0005737 ! intestinal rod -relationship: end ZFS:0000032 ! Pharyngula:High-pec -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-07-23T03:06:11Z @@ -29766,9 +29769,9 @@ def: "A secretory cell found in pancreatic acini that secretes digestive enzymes subset: cell_slim xref: CL:0002064 is_a: ZFA:0009277 ! acinar cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005741 ! pancreatic acinar gland -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:13:45Z @@ -29781,9 +29784,9 @@ subset: cell_slim synonym: "CAC" EXACT [ZFIN:ZDB-PUB-050623-3] xref: CL:0002080 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005741 ! pancreatic acinar gland -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:16:32Z @@ -29795,9 +29798,9 @@ def: "Portion of exocrine pancreas that is comprised of polarized cells containi synonym: "exocrine glands pancreas" EXACT [] synonym: "pancreatic acini" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-07-29T10:42:33Z @@ -29813,9 +29816,9 @@ synonym: "PP cell of pancreatic islet" EXACT [] synonym: "PP-cell of pancreatic islet" EXACT [] xref: CL:0002275 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001260 ! endocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-29T10:59:29Z @@ -29831,9 +29834,9 @@ synonym: "pancreatic delta cell" EXACT [] synonym: "somatostatin-secreting pancreatic cell" EXACT [] xref: CL:0000173 is_a: ZFA:0009228 ! D cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001260 ! endocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-29T11:03:15Z @@ -29846,9 +29849,9 @@ subset: cell_slim synonym: "notochord sheath cell" RELATED [] xref: CL:0007007 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2013-07-30T04:09:49Z @@ -29860,8 +29863,8 @@ def: "A cell whose primary function is to provide structural support, to provide subset: cell_slim xref: CL:0000293 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-30T04:14:44Z @@ -29873,9 +29876,9 @@ def: "Structural cell of notochord that contain one large fluid-filled intracell subset: cell_slim synonym: "chordocytes" EXACT [] is_a: ZFA:0005745 ! structural cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2013-07-30T04:15:56Z @@ -29886,9 +29889,9 @@ namespace: zebrafish_anatomy def: "Lymph vessels that are located on either side of the PCV in the posterior region of the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "SIL" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005840 ! intestinal lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2013-07-31T10:44:16Z @@ -29898,10 +29901,10 @@ name: intrapancreatic duct namespace: zebrafish_anatomy def: "Digestive duct within the pancreas. The pancreatic duct carries inactive digestive enzymes to the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3, ZFIN:ZDB-PUB-101201-32] is_a: ZFA:0005162 ! digestive system duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000140 ! pancreas relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2013-08-01T02:17:49Z @@ -29911,8 +29914,8 @@ name: intercalated duct pancreas namespace: zebrafish_anatomy def: "The portion of the intrapancreatic duct leading from the pancreatic acinar gland to the intralobular duct." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:44:27Z @@ -29922,9 +29925,9 @@ name: pancreatic intralobular duct namespace: zebrafish_anatomy def: "Intrapancreatic duct within a pancreatic lobe that connects all the intercalated duct with an interlobular duct. The intralobular duct is lined with cuboidal cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:50:38Z @@ -29934,8 +29937,8 @@ name: pancreatic interlobular duct namespace: zebrafish_anatomy def: "Intrapancreatic duct that connects the intralobular duct to the main pancreatic duct." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T02:53:52Z @@ -29945,8 +29948,8 @@ name: main intrapancreatic duct namespace: zebrafish_anatomy def: "Intrapancreatic duct that connects to the interlobular ducts and drains into the extrapancreatic duct. The main duct may not be present in all larva and may develop in a segmented fashion." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050623-3, ZFIN:ZDB-PUB-070310-3] is_a: ZFA:0005748 ! intrapancreatic duct -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-08-01T02:55:07Z @@ -29958,9 +29961,9 @@ def: "Cluster of acinar glands surrounding an intralobular duct." [GOC:cvs, ORCi comment: Lobules are composed of multiple acini so are only apparent starting ~72hpf. Before 72hpf consider annotating to acinar gland. synonym: "exocrine lobule" EXACT [ZFIN:ZDB-PUB-050623-3] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001249 ! exocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T03:16:34Z @@ -29971,8 +29974,8 @@ namespace: zebrafish_anatomy def: "The primary islet is the first islet to develop." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "principal islet" EXACT [] is_a: ZFA:0005755 ! islet -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T04:05:06Z @@ -29982,9 +29985,9 @@ name: islet namespace: zebrafish_anatomy def: "Portion of tissue composed of a group of cells in the pancreas producing insulin, glucagon and somatostatin. Part of the endocrine pancreas." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001260 ! endocrine pancreas -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-01T04:10:28Z @@ -29995,8 +29998,8 @@ namespace: zebrafish_anatomy def: "Islets that develop after the primary islet. The secondary islets usually form around 7 dpf but can be induced to form as early as 5 dpf." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130710-45, ZFIN:ZDB-PUB-140817-2] comment: Start stage known to be after 3dpf. is_a: ZFA:0005755 ! islet -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2013-08-01T04:10:55Z @@ -30008,9 +30011,9 @@ def: "Portion of tissue composed of the signal-generating cells within the zona synonym: "MDO" EXACT [] synonym: "mid-diencephalic organizer" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001344 ! zona limitans intrathalamica -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-08-02T03:20:09Z @@ -30021,9 +30024,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue interspersed within the pancreatic acini." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005753 ! pancreatic lobule -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 created_by: Ceri creation_date: 2013-09-23T10:03:51Z @@ -30035,9 +30038,9 @@ def: "Adipose tissue on the surface of the organs within the pleuroperitoneal ca comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. synonym: "visceral fat deposit" RELATED [] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007116 ! pleuroperitoneal region -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2013-09-23T10:23:07Z @@ -30048,9 +30051,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue in the cranium. Cranial adipocytes are located within the ventral wall of the cranium, situated between the brain and the esophagus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T10:26:44Z @@ -30061,9 +30064,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue surrounding the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917] comment: No evidence of septa surrounding fat has been presented so is a fat accumulation or deposit not a fat pad. is_a: ZFA:0005760 ! cranial fat -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001410 ! orbital region -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T10:59:00Z @@ -30073,8 +30076,8 @@ name: subcutaneous fat namespace: zebrafish_anatomy def: "Adipose tissue between muscle and integument." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111012-7] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2013-09-23T11:20:54Z @@ -30084,9 +30087,9 @@ name: esophageal fat namespace: zebrafish_anatomy def: "Adipose tissue surrounding the esophagus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:32:46Z @@ -30097,9 +30100,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue deposited along the mandible." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] synonym: "jaw fat deposit" EXACT [] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001273 ! ventral mandibular arch -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:33:07Z @@ -30110,9 +30113,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue surrounding the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090417-9] synonym: "pericardial fat deposit" EXACT [] is_a: ZFA:0005345 ! adipose tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000054 ! pericardium -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:41:21Z @@ -30123,9 +30126,9 @@ namespace: zebrafish_anatomy def: "Adipose tissue that forms at the base of the pectoral fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090417-9] synonym: "pectoral fin plate deposit" EXACT [] is_a: ZFA:0005762 ! subcutaneous fat -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T11:42:40Z @@ -30136,9 +30139,9 @@ namespace: zebrafish_anatomy def: "Subcutaneous adipose tissue deposit at the base of the caudal fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-101011-51] synonym: "tail fin fat" EXACT [] is_a: ZFA:0005762 ! subcutaneous fat -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001058 ! caudal fin -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: Ceri creation_date: 2013-09-23T12:46:21Z @@ -30147,9 +30150,10 @@ id: ZFA:0005768 name: trigeminal sensory neuron namespace: zebrafish_anatomy def: "Sensory neuron that extends a single axon shaft along the lateral white matter of the hindbrain and spinal cord. Numerous medially projecting branches are later formed and innervate a series of target nuclei along the anteroposterior axis of the hindbrain and spinal cord. The highly branched axons innervate the integument of the head. There are several subtypes with different afferent branching morphologies." [ZFIN:ZDB-PUB-120106-15] +subset: cell_slim is_a: ZFA:0009053 ! sensory neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2013-09-30T03:31:51Z @@ -30162,9 +30166,9 @@ subset: cell_slim xref: CL:0000018 is_a: ZFA:0009016 ! germ line cell relationship: develops_from ZFA:0009005 ! spermatocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 created_by: Ceri creation_date: 2013-10-04T03:51:27Z @@ -30173,9 +30177,10 @@ id: ZFA:0005770 name: crypt neuron olfactory support cell namespace: zebrafish_anatomy def: "Specialized olfactory support cell that surrounds crypt olfactory sensory neurons. There are one or two support cells for each crypt neuron. The cytoplasm of crypt neuron olfactory support cells is less electron dense then other support cells. They also bear numerous microvilli at their apical rim. When two supporting cells are present, they interdigitate with each other Mitochondria in crypt supporting cells are larger than those in the common supporting cells." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060724-7] +subset: cell_slim is_a: ZFA:0000688 ! olfactory support cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-11-05T11:05:25Z @@ -30186,8 +30191,8 @@ namespace: zebrafish_anatomy def: "Portion of tissue that develops from the cranial neural crest and which cells populate a series of pharyngeal arches from which develops the support skeleton of the jaw and gills." [ZFIN:ZDB-PUB-110609-14, ZFIN:ZDB-PUB-120517-11] is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007087 ! migratory cranial neural crest -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: Ceri creation_date: 2013-11-25T12:11:28Z @@ -30199,8 +30204,8 @@ def: "Diploid cell produced by the fusion of sperm cell nucleus and egg cell." [ synonym: "zygote " EXACT [] xref: CL:00000365 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000001 ! Zygote:1-cell -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000001 ! zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell created_by: Ceri creation_date: 2013-11-25T01:46:49Z @@ -30209,10 +30214,11 @@ id: ZFA:0005773 name: embryonic blood vessel endothelial progenitor cell namespace: zebrafish_anatomy def: "An endothelial progenitor cell that participates in angiogenesis during development." [GOC:tjm] +subset: cell_slim xref: CL:0002546 is_a: ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000026 ! Segmentation:14-19 somites -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Ceri creation_date: 2013-12-02T02:57:49Z @@ -30222,9 +30228,9 @@ name: atrial epicardium namespace: zebrafish_anatomy def: "The external layer of the atrium bounding the atrial myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100112-31] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005057 ! epicardium -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2013-11-26T04:32:55Z @@ -30233,11 +30239,12 @@ id: ZFA:0005775 name: enteric neuron namespace: zebrafish_anatomy def: "Neuron that is part of the enteric nervous system." [CL:MAH] +subset: cell_slim xref: CL:0007011 is_a: ZFA:0009059 ! autonomic neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001155 ! enteric nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T12:36:50Z @@ -30246,11 +30253,12 @@ id: ZFA:0005776 name: parasympathetic neuron namespace: zebrafish_anatomy def: "Parasympathetic neurons are part of the parasympathetic nervous system and the cell bodies lie in the brain and sacral region of the spinal cord. The neurons are mainly cholinergic." [ISBN:0080923437] +subset: cell_slim xref: CL:0011102 is_a: ZFA:0009059 ! autonomic neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001575 ! parasympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T12:39:37Z @@ -30259,11 +30267,12 @@ id: ZFA:0005777 name: sympathetic neuron namespace: zebrafish_anatomy def: "Sympathetic neurons are part of the sympathetic nervous system and are primarily adrenergic producing the neurotransmitter noradrenalin along with other neuropeptides." [ISBN:0080923437] +subset: cell_slim xref: CL:0011103 is_a: ZFA:0009059 ! autonomic neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001576 ! sympathetic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T12:42:24Z @@ -30272,11 +30281,12 @@ id: ZFA:0005778 name: hypocretin-secreting neuron namespace: zebrafish_anatomy def: "A neuron that releases hypocretin as a neurotransmitter." [PMID:23848055] +subset: cell_slim synonym: "orexin secreting neuron " RELATED [] xref: CL:0011109 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-06T01:14:29Z @@ -30286,9 +30296,9 @@ name: thymic epithelium namespace: zebrafish_anatomy def: "Epithelium within the thymus where lymphocytes mature. Cells of the thymic epithelium have cytoplasm that appear devoid of most membrane bound organelles but contain bundles of cytoplasmic filaments, and frequent desmosomes occur between these epithelial cells. There are also secretory epithelial cells that contain a heterogeneous population of electron-dense, cytoplasmic granules and a well developed Golgi complex. Epithelial cysts are present after 3 weeks." [ZFIN:ZDB-PUB-990414-60] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001078 ! thymus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-03-11T03:25:06Z @@ -30298,9 +30308,9 @@ name: immature thymic epithelium namespace: zebrafish_anatomy def: "Epithelium of the thymus primordium composed of cells of immature morphology. The immature thymic epithelium is continuous with the pharyngeal epithelium. The immature thymic epithelium is composed of electron-lucent epithelial cells of irregular or polygonal shape and contain numerous ribosomes, large electron-lucent mitochondria, and rough endoplasmic reticulum. Nascent desmosomes join these primitive epithelial cells together." [ZFIN:ZDB-PUB-990414-60] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0001077 ! thymus primordium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2014-03-11T03:28:25Z @@ -30310,9 +30320,9 @@ name: cloaca namespace: zebrafish_anatomy def: "Part of the gut where the pronephric tubules come together with the caudal end of the intestine attaching at 4dpf. The oviduct or sperm duct connect later." [ZFIN:ZDB-PUB-060508-11] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2014-03-12T09:34:37Z @@ -30323,9 +30333,9 @@ namespace: zebrafish_anatomy def: "The juncture where the intestine empties into the cloaca." [GOC:cvs, ORCiD:0000-0002-2244-7917] synonym: "gut opening" EXACT [] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000330 ! cloacal chamber -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-12T09:39:01Z @@ -30335,10 +30345,10 @@ name: cloacal epithelium namespace: zebrafish_anatomy def: "Epithelium lining the cloaca. The epithelium is a simple cuboidal epithelium at Prim-5." [ZFIN:ZDB-PUB-000505-17] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005123 ! gut epithelium relationship: part_of ZFA:0005781 ! cloaca -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2014-03-12T10:18:40Z @@ -30347,10 +30357,11 @@ id: ZFA:0005784 name: striated muscle cell namespace: zebrafish_anatomy def: "Muscle cell which has as its direct parts myofilaments organized into sarcomeres." [GOC:tfm, ISBN:0721662544] +subset: cell_slim xref: CL:0000737 is_a: ZFA:0009114 ! muscle cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-03-18T03:14:29Z @@ -30361,13 +30372,13 @@ namespace: zebrafish_anatomy def: "Striated muscle of the esophagus. Permits voluntary swallowing." [ZFIN:ZDB-PUB-130709-61] synonym: "oesophageal striated muscle (OSM)" EXACT [ZFIN:ZDB-PUB-130709-61] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: has_developmental_contribution_from ZFA:0000072 ! somite 1 relationship: has_developmental_contribution_from ZFA:0000728 ! somite 2 relationship: has_developmental_contribution_from ZFA:0000732 ! somite 3 relationship: has_developmental_contribution_from ZFA:0005923 ! anterior migratory muscle precursor stream relationship: part_of ZFA:0000204 ! esophagus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-03-18T03:37:56Z @@ -30376,10 +30387,11 @@ id: ZFA:0005786 name: cleft cell namespace: zebrafish_anatomy def: "Wedge-shaped epidermal cell positioned along the apex of the developing fin fold. Each cleft cell retains a wedge-shaped form during fold formation and develops a basal cleft-shaped invagination. Invaginations are aligned in neighboring cleft cells so that these cells cap the distal boundary of the subepidermal space where collagenous extracellular fibres called actinotrichia run anteroposteriorly along the length of the fin fold." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-195] +subset: cell_slim is_a: ZFA:0009183 ! epidermal cell -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0000040 ! median fin fold -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: Ceri creation_date: 2014-03-25T09:31:29Z @@ -30389,9 +30401,9 @@ name: hypophyseal artery namespace: zebrafish_anatomy def: "Artery that runs along the midline from anterior to posterior regions of the hypothalamus and splits into two capillary branches (hyc). The formation of the artery is initiated at the hypophysis itself and extends anteriorly until it connects with the palatocerebral arteries at day 2.5." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111027-47, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T10:42:12Z @@ -30401,9 +30413,9 @@ name: hypophyseal vein namespace: zebrafish_anatomy def: "Vein thats tarts posterior of the hypophysis and drains the hypophyseal capillaries. It empties into the primary head sinus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T10:47:03Z @@ -30414,8 +30426,8 @@ namespace: zebrafish_anatomy def: "Axon tract originating from the two hemispheres of the neurosecretory preoptic areas converging into the midline and terminating at the ventral part of the hypothalamus at the presumed location of the pituitary. Analogous to the supraopticohypophyseal tract in mammals." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-111027-47] synonym: "preopticohypophyseal axon tract" EXACT [] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-04-03T11:19:03Z @@ -30425,9 +30437,9 @@ name: hypophyseal capillary namespace: zebrafish_anatomy def: "Pair of capillaries that bilaterally encompass the hypophysis starting at the anterior aspect of the hypophysis (pituitary). Directly posterior to the pituitary, the two capillaries fuse with the hypophyseal vein." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-130222-26] is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000099 ! brain vasculature -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2014-04-03T11:27:53Z @@ -30437,9 +30449,9 @@ name: breeding tubercle namespace: zebrafish_anatomy def: "Surface structure that is a keratinized epidermal appendages that is a contact organ and secondary sex organ." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-05-15T03:26:12Z @@ -30450,8 +30462,8 @@ namespace: zebrafish_anatomy def: "Surface structure that is a protrusion from the rostral end of the jaw, supported by the mandibular projection." [ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] synonym: "lateral projections lower jaw" EXACT [] is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:10:53Z @@ -30461,9 +30473,9 @@ name: superficial layer of breeding tubercle namespace: zebrafish_anatomy def: "Layer of smooth cells composing the outer layer of the breeding tubercle. Cells in this layer have a high keratin content, lamellar bodies, and condensed chromosomes. This layer is repeatedly shed and regenerated." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:33:07Z @@ -30473,9 +30485,9 @@ name: second tier layer of breeding tubercle namespace: zebrafish_anatomy def: "Cell layer that lies underneath the superficial layer of the breeding tubercle. Characterized by tight junctions within the layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:46:01Z @@ -30486,9 +30498,9 @@ namespace: zebrafish_anatomy def: "Intermediate layer of the breeding tubercles characterized by cells with loose spinous organization connected to each other via desmosomes, but with wide extracellular spaces in between." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] synonym: "spinous keratinocyte layer" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:46:51Z @@ -30498,9 +30510,9 @@ name: basal layer breeding tubercle namespace: zebrafish_anatomy def: "Layer of breeding tubercle proximal to basal lamina of the integument." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:48:25Z @@ -30510,10 +30522,10 @@ name: pectoral fin breeding tubercle namespace: zebrafish_anatomy def: "Breeding tubercles along the surface of the pectoral fin lepidotrichium of males." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0005791 ! breeding tubercle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000242 ! male organism relationship: part_of ZFA:0001161 ! pectoral fin -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-04T02:50:54Z @@ -30523,8 +30535,8 @@ name: jaw row breeding tubercle namespace: zebrafish_anatomy def: "Surface structures composed of breeding tubercles arranged in a double row in the medial region on each side of the lower jaw." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0005791 ! breeding tubercle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T02:56:48Z @@ -30534,8 +30546,8 @@ name: jaw flap breeding tubercle namespace: zebrafish_anatomy def: "Breeding tubercles that cover the surface of the jaw flap." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29, ZFIN:ZDB-PUB-140519-1] is_a: ZFA:0005791 ! breeding tubercle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T03:32:28Z @@ -30545,9 +30557,9 @@ name: extracellular lipid lamellae namespace: zebrafish_anatomy def: "Portion of organism substance that is located between the cap and second tier layers of the breeding tubercles. The lipid lamellae is composed of lipids." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140317-29] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005791 ! breeding tubercle -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 created_by: Ceri creation_date: 2014-06-04T04:00:53Z @@ -30559,9 +30571,9 @@ def: "The interrenal vessel (IRV) is the blood vessels supplying the interrenal synonym: "IRV" EXACT [] is_a: ZFA:0005314 ! blood vessel relationship: develops_from ZFA:0005802 ! interrenal angiogenic sprout -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001345 ! interrenal gland -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2014-06-06T01:45:08Z @@ -30571,9 +30583,9 @@ name: interrenal angiogenic sprout namespace: zebrafish_anatomy def: "Sprout from the dorsal aorta that develops into the interrenal vessel." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120905-5] is_a: ZFA:0005604 ! angiogenic sprout -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001346 ! interrenal primordium -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2014-06-10T10:26:33Z @@ -30583,9 +30595,9 @@ name: cupula namespace: zebrafish_anatomy def: "Gelatinous substance surrounding the kinocila of the neuromast." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-768] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T09:55:56Z @@ -30597,10 +30609,10 @@ def: "Efferent neuron where the cell body is located in the hindbrain reticular subset: cell_slim synonym: "RELL neuron" EXACT [] is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000029 ! hindbrain relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T10:08:34Z @@ -30612,9 +30624,9 @@ def: "Efferent neuron located in the hindbrain. The axon of ROLE cells travels subset: cell_slim synonym: "ROLE neuron" EXACT [] is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T10:42:22Z @@ -30627,10 +30639,10 @@ comment: There may be 2 neuron types grouped under this name since there are som subset: cell_slim synonym: "DELL neuron" EXACT [] is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000034 ! lateral line system relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-06-24T11:50:49Z @@ -30641,9 +30653,9 @@ namespace: zebrafish_anatomy def: "Anatomical space within the intestine where digestion normally occurs. The intestinal lumen begins as an interconnected web of small space at 43 hpf that over time remodels to form a single continuous tube at 68hpf. Lumen maturation proceeds from anterior to posterior along the intestine." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140415-28] synonym: "gut lumen" RELATED [] is_a: ZFA:0005930 ! lumen -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-14T01:57:57Z @@ -30656,9 +30668,9 @@ comment: Appears after cardiac looping ~30hpf. Derived from mesoderm. synonym: "proepicardial organ" EXACT [ZFIN:ZDB-PUB-080218-16] synonym: "proepicardium" EXACT [ZFIN:ZDB-PUB-140603-8] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-28T03:01:42Z @@ -30669,9 +30681,9 @@ namespace: zebrafish_anatomy def: "Network of heavily branched muscle in the atrium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-001026-2] synonym: "pectinate muscles" EXACT PLURAL [] is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000471 ! atrium -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-07-28T04:28:45Z @@ -30681,10 +30693,10 @@ name: trabecular layer of the atrium namespace: zebrafish_anatomy def: "Trabecular layer of the atrial myocardium." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001374 ! atrial myocardium relationship: part_of ZFA:0005059 ! trabecular layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-28T04:35:49Z @@ -30694,9 +30706,9 @@ name: heart vasculature namespace: zebrafish_anatomy def: "Is an interconnected tubular multi-tissue structure that contains fluid that is actively transported around the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000114 ! heart -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:04:10Z @@ -30707,9 +30719,9 @@ namespace: zebrafish_anatomy def: "Artery that carries blood from the efferent branchial artery to the cardiac ventricle. The artery runs along the ventral surface of the bulbus arteriosus." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] synonym: "coronary vessel" EXACT [ZFIN:ZDB-PUB-010912-30] is_a: ZFA:0000005 ! artery -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005811 ! heart vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:05:29Z @@ -30719,9 +30731,9 @@ name: coronary capillary namespace: zebrafish_anatomy def: "Capillaries that innervate the subtrabecular layer of the heart." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005811 ! heart vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:09:35Z @@ -30731,9 +30743,9 @@ name: coronary vein namespace: zebrafish_anatomy def: "Vein that carries blood from the coronary capillaries to the atrial chamber entering the atrium close to the atrioventricular region." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010912-30] is_a: ZFA:0000082 ! vein -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005811 ! heart vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T10:11:35Z @@ -30751,8 +30763,8 @@ synonym: "T-interneuron" EXACT [] synonym: "t-interneuron" EXACT [] xref: TAO:0005182 is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-07-31T02:33:52Z @@ -30763,9 +30775,9 @@ namespace: zebrafish_anatomy def: "Anterior longitudinal muscles of the dorsal fin. The dorsal fin protractor originates from the base of the first soft ray of the dorsal fin, extends along the midline just underneath the skin, and inserts at the posterior portion of the skull. Contracting the dorsal protractor will raise the fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] synonym: "protractor dorsalis" EXACT [] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-27T12:59:02Z @@ -30776,9 +30788,9 @@ namespace: zebrafish_anatomy def: "Anterior longitudinal muscles of the dorsal fin. That originates from the caudal end of the dorsal fin base, stretches along the midline between the right and left epaxial muscles, and inserts at the dorsal base of the tail fin. Contracting the dorsal retractor will lower the fin." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] synonym: "retractor dorsalis" EXACT [] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000648 ! dorsal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-27T01:05:51Z @@ -30788,8 +30800,8 @@ name: superficial caudal fin musculature namespace: zebrafish_anatomy def: "The layer of caudal fin musculature immediately under the integument that originate from the vertebral column and insert at the base of caudal fin rays." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] is_a: ZFA:0000628 ! caudal fin musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-29T04:13:54Z @@ -30799,8 +30811,8 @@ name: deep caudal fin musculature namespace: zebrafish_anatomy def: "The layer of caudal fin musculature immediately under the superficial caudal fin musculature that originate from the vertebral column and insert at the base of caudal fin rays. The three most caudal vertebrae and the hypurals serve as attachment sites for these muscles." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060623-21] is_a: ZFA:0000628 ! caudal fin musculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-29T04:16:13Z @@ -30812,10 +30824,10 @@ def: "Paired, deep caudal fin muscles that arise broadly from the hypurals and e synonym: "ACV" RELATED [] synonym: "adductor caudalis ventralis" EXACT [] is_a: ZFA:0005268 ! adductor muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000902 ! hypural muscle relationship: part_of ZFA:0005819 ! deep caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T09:51:20Z @@ -30827,9 +30839,9 @@ def: "Paired superficial caudal fin muscle that has a narrow attachment site alo synonym: "ICV" RELATED [] synonym: "interfilamenti caudalis ventralis" EXACT [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-10-30T10:11:24Z @@ -30841,9 +30853,9 @@ def: "Paired superficial caudal fin muscle that has a narrow attachment site alo synonym: "ICD" RELATED [] synonym: "interfilamenti caudalis dorsalis " EXACT [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2014-10-30T10:14:35Z @@ -30855,9 +30867,9 @@ def: "Paired superficial caudal fin muscle that originates from a broad base at synonym: "lateralis superficialis dorsalis" EXACT [] synonym: "LSD" RELATED [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T12:34:51Z @@ -30869,9 +30881,9 @@ def: "Paired superficial caudal fin muscle that is located ventrally and extends synonym: "lateralis profundus ventralis " EXACT [] synonym: "LPV" RELATED [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T12:44:54Z @@ -30883,9 +30895,9 @@ def: "Paired superfical caudal fin muscle that is located dorsally and extends f synonym: "lateralis profundus dorsalis" EXACT [] synonym: "LPD" RELATED [] is_a: ZFA:0005277 ! skeletal muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005818 ! superficial caudal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2014-10-30T01:24:56Z @@ -30895,9 +30907,9 @@ name: tri-tipped trabecula namespace: zebrafish_anatomy def: "Cardiac muscle located in the trabecular layer of the ventricle that is attached to the base of the AV and BV valves. It is similar to the papillary muscle in mammals and birds but, does not attach to the ends of the valve leaflets." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005060 ! trabecular layer of ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-02-19T03:45:32Z @@ -30907,9 +30919,9 @@ name: transverse band namespace: zebrafish_anatomy def: "Cardiac muscle located in the trabecular layer of the ventricle that spans the central lumen near the ventricular apex. The transverse muscle band superficially resembles the septomarginal trabecula found in reptilian and mammalian hearts in that it spans the ventricle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-121030-7] is_a: ZFA:0005280 ! cardiac muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005060 ! trabecular layer of ventricle -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-02-19T03:48:37Z @@ -30921,8 +30933,8 @@ def: "An olfactory receptor cells with apical microvilli. The pear shaped soma subset: cell_slim synonym: "kappe neuron" EXACT [] is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-02-20T10:55:06Z @@ -30933,9 +30945,9 @@ namespace: zebrafish_anatomy def: "Vessel that drains aqueous humor from the eye." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-140728-8] comment: ZDB-PUB-140728-8 says the canal has lymphatic-like. is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000107 ! eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-02-23T10:20:30Z @@ -30950,8 +30962,8 @@ synonym: "haemopoietic cell" RELATED [] synonym: "hemopoietic cell" EXACT [] xref: CL:0000988 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-02-27T09:55:34Z @@ -30962,9 +30974,9 @@ namespace: zebrafish_anatomy def: "Interconnected lymph vasculature in the anterior portion of the head." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "facial lymphatics" RELATED [] is_a: ZFA:0005105 ! lymph vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2015-04-21T03:16:49Z @@ -30976,11 +30988,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 3. The vessel s synonym: "LAA1" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001606 ! pharyngeal arch 3 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-21T04:16:23Z @@ -30992,11 +31004,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 4. The vessel s synonym: "LAA2" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001607 ! pharyngeal arch 4 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-22T10:05:13Z @@ -31008,11 +31020,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 5. The vessel s synonym: "LAA3" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001608 ! pharyngeal arch 5 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-22T10:06:52Z @@ -31024,11 +31036,11 @@ def: "Superficial lymph vessel that is part of pharyngeal arch 6. The vessel s synonym: "LAA4 " EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001610 ! pharyngeal arch 7 relationship: part_of ZFA:0005003 ! pharyngeal vasculature relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-04-22T10:18:37Z @@ -31040,9 +31052,9 @@ def: "Lymphangiogenic sprout that originates from the common cardinal vein and comment: Although a facial lymphatic vessel has previously been described using lymphangiography in 5-week-old zebrafish (Yaniv et al., 2006), we are not sure whether\nthis previously described vessel is connected to, or derived from, the FL network that we have identified (ZDB-PUB-120529-43). synonym: "FLS" EXACT [] is_a: ZFA:0005603 ! lymphangiogenic sprout -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2015-04-22T12:15:12Z @@ -31055,9 +31067,9 @@ synonym: "lateral facial lymphatic" EXACT [] synonym: "LFL" EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005836 ! facial lymphatic sprout -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-04-22T12:41:36Z @@ -31069,9 +31081,9 @@ def: "Facial lymphatic vessel that sprouts from the lateral facial lymph vessel. synonym: "otolithic lymphatic vessel" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-04-22T02:06:44Z @@ -31084,9 +31096,9 @@ synonym: "medial facial lymphatic" EXACT [] synonym: "MFL " EXACT [] is_a: ZFA:0005844 ! lymph vessel relationship: develops_from ZFA:0005837 ! lateral facial lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005831 ! facial lymphatic network -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-23T01:49:47Z @@ -31098,8 +31110,8 @@ def: "Lymph vasculature surrounding the intestines." [GOC:cvs, ORCID:0000-0002-2 synonym: "" RELATED [] synonym: "intestinal lymphatics" EXACT [] is_a: ZFA:0005105 ! lymph vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-30T11:15:28Z @@ -31110,9 +31122,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel that follows the supraintestinal artery." [GOC:CVS, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "UR-IL" EXACT [ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005843 ! right intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:25:27Z @@ -31123,9 +31135,9 @@ namespace: zebrafish_anatomy def: "Pair of lymph vessel that follows the right subintestinal vein. At 6 dpf, the LR-IL appears to bifurcate and form two separate vessels that both run in close proximity to one another along the right sub intestinal vein. These vessels are difficult to distinguish from each other at 6dp." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "LR-IL" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005843 ! right intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:28:11Z @@ -31135,8 +31147,8 @@ name: right intestinal lymphatics namespace: zebrafish_anatomy def: "Lymph vessels that are on the right side of the intestine." [GOC:cvs, ORCID:0000-0002-2244-7917] is_a: ZFA:0005840 ! intestinal lymphatic network -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-30T11:31:28Z @@ -31146,9 +31158,9 @@ name: lymph vessel namespace: zebrafish_anatomy def: "Any of the tubular multi-tissue structures through which lymph moves in the body. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal." [GOC:cvs, ORCID:0000-0002-2244-7917] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005105 ! lymph vasculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-04-30T11:44:00Z @@ -31160,9 +31172,9 @@ def: "Lymph vessel that extends along the left subintestinal vein." [GOC:cvs, OR synonym: "LL-IL" EXACT [] synonym: "lower left intestinal lymphatic" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005846 ! left intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T11:49:08Z @@ -31172,8 +31184,8 @@ name: left intestinal lymphatics namespace: zebrafish_anatomy def: "Lymph vessels that are on the left side of the intestine. These do not run as far posteriorly as the right intestinal lymphatics." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] is_a: ZFA:0005840 ! intestinal lymphatic network -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000036 ! Larval:Day 4 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000036 ! larval:day 4 created_by: Ceri creation_date: 2015-04-30T11:52:58Z @@ -31184,9 +31196,9 @@ namespace: zebrafish_anatomy def: "Lymph vessel on the left of the intestine that runs parallel to the upper right intestinal lymph vessel. There does not appear to be an associated blood vessel." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-120529-43] synonym: "UL-IL" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005846 ! left intestinal lymphatics -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T12:28:46Z @@ -31196,9 +31208,9 @@ name: intestinal interlymphatic vessel namespace: zebrafish_anatomy def: "Lymph vessel that connects lymph vessels within the intestinal lymphatic network." [GOC:cvs, ORCID:0000-0002-2244-7917] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005840 ! intestinal lymphatic network -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 created_by: Ceri creation_date: 2015-04-30T01:40:05Z @@ -31209,8 +31221,8 @@ namespace: zebrafish_anatomy def: "Is a multi-tissue structure composed of dentine, enameloid and tooth pulp that develops from the dental organ. These structures successively replace the primary ceratobranchial teeth." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-001208-4] is_a: ZFA:0000694 ! ceratobranchial 5 tooth relationship: develops_from ZFA:0005138 ! dental organ -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth creation_date: 2015-06-19T12:48:15Z [Term] @@ -31223,8 +31235,8 @@ synonym: "nTPC" RELATED [] synonym: "nucleus of posterior commissure" EXACT [] synonym: "nucleus of the tract of the posterior commissure " RELATED [] is_a: ZFA:0001659 ! diencephalic nucleus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-06-19T03:27:22Z @@ -31234,8 +31246,8 @@ name: ceratobranchial 5 primary tooth namespace: zebrafish_anatomy def: "Is a multi-tissue structure composed of dentine, enameloid and tooth pulp that develops from the dental organ. These are the first teeth to develop." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-020820-10] is_a: ZFA:0000694 ! ceratobranchial 5 tooth -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2015-07-01T04:53:58Z @@ -31245,9 +31257,9 @@ name: replacement tooth 4V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 3V and anterior to tooth 5V in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 4V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2015-07-01T04:55:16Z @@ -31257,9 +31269,9 @@ name: replacement tooth 5V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the posteriormost tooth in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 5V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-07-02T09:04:21Z @@ -31269,9 +31281,9 @@ name: replacement tooth 3V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 2V and anterior to tooth 4V in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 3V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000038 ! Larval:Day 6 +relationship: start ZFS:0000038 ! larval:day 6 created_by: Ceri creation_date: 2015-07-02T09:05:23Z @@ -31281,9 +31293,9 @@ name: replacement tooth 2V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is posterior to tooth 1V and anterior to tooth 3V in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 2V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-07-02T09:18:29Z @@ -31293,9 +31305,9 @@ name: replacement tooth 1V namespace: zebrafish_anatomy def: "Ceratobranchial 5 tooth which is the anteriormost tooth in the ventral tooth row. This tooth develops from the dental epithelium at the position of primary tooth 1V." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005849 ! ceratobranchial 5 replacement tooth -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001137 ! ventral tooth row -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-07-02T09:19:35Z @@ -31305,8 +31317,8 @@ name: bile namespace: zebrafish_anatomy def: "Zebrafish bile contains the bile alcohol cyprinol sulfate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120822-8] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-07-31T11:15:59Z @@ -31317,8 +31329,8 @@ namespace: zebrafish_anatomy def: "Capillaries that branch from the hyaloid artery and drain into the hyaloid vein. The hyaloid capillaries are located behind the lens and may be transient." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-150419-5] is_a: ZFA:0005046 ! hyaloid vessel is_a: ZFA:0005250 ! capillary -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-08-17T04:43:51Z @@ -31328,8 +31340,8 @@ name: ceratohyal-interhyal joint namespace: zebrafish_anatomy def: "Joint that articulates the interhyal skeletal element and ceratohyal skeletal element. The ceratohyal-interhyal joint is paired." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-970210-30] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-09-09T01:15:07Z @@ -31339,8 +31351,8 @@ name: interhyal-hyosymplectic joint namespace: zebrafish_anatomy def: "Joint that articulates the interhyal element and the hyosymplectic element. The interhyal-hyosymplectic joint is paired." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-970210-30] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-09-09T01:28:54Z @@ -31350,8 +31362,8 @@ name: opercle-hyosymplectic joint namespace: zebrafish_anatomy def: "Joint that articulates the opercle and they hyosymplectic. The opercle-hyosymplectic joint is paired." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-970210-30] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-09-09T01:33:46Z @@ -31361,8 +31373,8 @@ name: ovarian lymph vessel namespace: zebrafish_anatomy def: "Lymph vessels within the ovary. These vessels are located in the interstitium between ovarian follicles and appear to envelop arterioles." [GOC:CVS, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-130218-10] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000040 ! larval:days 14-20 created_by: Ceri creation_date: 2015-10-28T12:00:39Z @@ -31373,9 +31385,9 @@ namespace: zebrafish_anatomy def: "Pectoral fin muscle. Links pectoral fin and branchial movement and stabilizes the pectoral girdle. Thought to be the teleost homologue of the cucullaris muscle group." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-110803-26] synonym: "protractor pectoralis" EXACT [ZFIN:ZDB-PUB-110803-26] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000563 ! pectoral fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2015-10-28T04:41:12Z @@ -31385,9 +31397,9 @@ name: retinotectal tract namespace: zebrafish_anatomy def: "Portion of optic tract that innervates the optic tectum." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-1095, ZFIN:ZDB-PUB-961014-148] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000252 ! optic tract -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2016-01-11T03:48:45Z @@ -31396,9 +31408,10 @@ id: ZFA:0005865 name: reticulospinal neuron namespace: zebrafish_anatomy def: "Neuron with the large soma in the brain with an axon projecting caudally to the spinal cord." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-594] +subset: cell_slim is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-01-12T10:33:08Z @@ -31407,10 +31420,11 @@ id: ZFA:0005866 name: vestibulospinal neuron namespace: zebrafish_anatomy def: "CNS interneuron with a soma located in a cluster in the lateral wall of the medulla, with dendrites confined to the neuropil, that has connections to the vestibular and lateral line neurons." [ZFIN:ZDB-PUB-961014-572] +subset: cell_slim synonym: "V" RELATED [] is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-01-12T11:25:07Z @@ -31421,9 +31435,9 @@ namespace: zebrafish_anatomy def: "Mesoderm part of the head." [GOC:cvs, ORCiD:0000-0002-2244-7917\,] is_a: ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0000414 ! presumptive cephalic mesoderm -relationship: end ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000034 ! hatching:pec-fin relationship: part_of ZFA:0001114 ! head -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2016-01-14T02:01:33Z @@ -31434,9 +31448,9 @@ namespace: zebrafish_anatomy def: "Rostral cell mass bordering the pretectum. The cells are stained with the gene nurod and are Hu positive. The region is named for its presumed homology to the avian griseum tectale." [ZFIN:ZDB-PUB-070711-1] synonym: "tectal grey " EXACT [] is_a: ZFA:0001665 ! midbrain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2016-01-22T12:54:41Z @@ -31446,9 +31460,9 @@ name: cerebellar plate namespace: zebrafish_anatomy def: "Multi-tissue structure that is made up of the external granular layer and the ventral proliferative layer." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000029 ! hindbrain -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2016-02-02T11:33:30Z @@ -31458,9 +31472,9 @@ name: cerebellar plate ventral proliferative layer namespace: zebrafish_anatomy def: "Proliferative zone on the ventral side of the cerebellar plate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005869 ! cerebellar plate -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2016-02-02T11:45:44Z @@ -31470,9 +31484,9 @@ name: region of the nucleus of the medial longitudinal fascicle namespace: zebrafish_anatomy def: "Portion of tissue in the midbrain that will develop into the nucleus of the medial longitudinal fasciculus synencephalon." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Ceri creation_date: 2016-02-02T11:47:50Z @@ -31483,9 +31497,9 @@ def: "Proliferative region that forms on peripheral side of the cerebellar plate synonym: "cerebellar plate peripheral proliferative zone" RELATED [] synonym: "EGL" EXACT [] is_a: ZFA:0000098 ! proliferative region -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005869 ! cerebellar plate -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2016-02-02T11:50:39Z @@ -31498,8 +31512,8 @@ subset: cell_slim xref: CL:0008025 is_a: ZFA:0009214 ! norepinephrine secreting cell is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-03-22T02:18:57Z @@ -31508,10 +31522,11 @@ id: ZFA:0005874 name: spiral neuron namespace: zebrafish_anatomy def: "Spiral neurons are excitatory interneurons located in rhombomere 3 and have contralateral projections that cross the midline forming commissures in rhombomere 3. After crossing the midline the two commissures fuse and project caudally synapsing with the Mauthner neuron. As they enter the axon cap, spiral fiber neurons lose their myelin and wrap around the axon hillock in a stereotyped spiral, where they make both electrical and glutamatergic synapses on the M cell axon close to the M-cell soma and with one another. Spiral neurons produced biphasic excitatory postsynaptic potentials (EPSPs) in the contralateral M-cell with a short latency." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-010711-2, ZFIN:ZDB-PUB-110110-13, ZFIN:ZDB-PUB-150512-4] +subset: cell_slim is_a: ZFA:0005209 ! hindbrain interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000948 ! rhombomere 3 -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-03-23T01:14:15Z @@ -31524,9 +31539,9 @@ comment: This tract was originally identified in zebrafish by Wilson et al., 199 synonym: " TCPT" EXACT [ZFIN:ZDB-PUB-961014-1268] synonym: "tract of the commissure of the posterior tuberculum" EXACT [] is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000491 ! commissure of the caudal tuberculum -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2016-06-07T10:08:17Z @@ -31536,9 +31551,9 @@ name: anterior chamber eye namespace: zebrafish_anatomy def: "The space between the cornea and lens in the anterior segment of the eye where the aqueous humor is located." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005566 ! anterior segment eye -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-10-13T15:42:03Z @@ -31549,8 +31564,8 @@ namespace: zebrafish_anatomy def: "Commissure that is formed by a subset of TCPT axons that cross the midline in the diencephalon. The TCPTc does not appear to cross with other commissures. The initial crossing of the TCPTc occurs at approximately 36 hpf." [GOC:cvs, GOC:dsf, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120419-3.] synonym: "Commissure of the TCPT" EXACT [] is_a: ZFA:0000338 ! diencephalic white matter -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2016-10-18T10:07:14Z @@ -31559,11 +31574,12 @@ id: ZFA:0005878 name: oogonia namespace: zebrafish_anatomy def: "An undifferentiated germ cell that proliferates rapidly and gives rise to oocytes. In zebrafish oogonia are round cells, with centrally located nucleoli, which are strongly basophilic. Oogonia in larva zebrafish fish are often found in clusters of two or four cells, corresponding to the second, or third oogonial divisions, presumably arising from mitotic divisions of primordial germ cells." [GOC:cvs, GOC:tfm, ISBN:0721662544, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-120718-30] +subset: cell_slim xref: CL:0000024 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000413 ! gonad -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2016-12-14T12:05:24Z @@ -31575,9 +31591,9 @@ def: "Tubules formed by the seminiferous epithelium that contains spermatogenic synonym: "seminiferous tubules" EXACT PLURAL [] synonym: "sperm duct" BROAD [] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-04-28T11:17:00Z @@ -31587,9 +31603,9 @@ name: seminiferous epithelium namespace: zebrafish_anatomy def: "Epithelium that lines the seminiferous tubules." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:39:16Z @@ -31599,9 +31615,9 @@ name: tunica propria of seminiferous tubule namespace: zebrafish_anatomy def: "The membranous sheath that surrounding the seminiferous tubule." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:44:18Z @@ -31611,9 +31627,9 @@ name: spermatogenic cyst namespace: zebrafish_anatomy def: "Structure in the testis formed by cytoplasmic projections of one or two Sertoli cells that surround a single spermatogonium. Sperm production occurs with in the cyst and the spermatogonium divides to generate approximately 1300 mature sperm. A given Sertoli cell is in contact with only one germ cell clone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:48:48Z @@ -31623,9 +31639,9 @@ name: tunica albuginea testis namespace: zebrafish_anatomy def: "Membranous sheath that surrounds the testis." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-090407-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-05-16T12:51:24Z @@ -31635,9 +31651,9 @@ name: seminiferous tubule lumen namespace: zebrafish_anatomy def: "Lumen of the seminiferous tubule. Mature sperm is stored in the tubular lumen." [GOC:cvs, https://en.wikibooks.org/wiki/The_Zebrafish_in_Toxicology/Spermatogenesis, ORCiD:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005879 ! seminiferous tubule -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites created_by: Ceri creation_date: 2017-05-16T13:18:07Z @@ -31647,8 +31663,8 @@ name: operculohyoid ligament namespace: zebrafish_anatomy def: "Ligament that connects the anterior apex of the opercle to the posterior end of the ceratohyal. The ligament extends orthogonal and anterior to the opercle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-161030-16] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec creation_date: 2017-06-12T13:27:26Z [Term] @@ -31658,9 +31674,9 @@ namespace: zebrafish_anatomy def: "Cartilage that attaches the parachordal cartilage to the auditory capsule anterior to the basicapsular fenestra. The anterior basicapsular commissure are paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "anterior basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2017-10-20T11:38:57Z @@ -31671,9 +31687,9 @@ namespace: zebrafish_anatomy def: "Cartilage that attaches the parachordal cartilage to the auditory capsule posterior of the basicapsular fenestra. The posterior basicapsular commissure are paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "posterior basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: start ZFS:0000034 ! hatching:pec-fin created_by: Ceri creation_date: 2017-10-20T11:42:11Z @@ -31685,9 +31701,9 @@ def: "Cartilage that grows from the auditory capsule medially toward the anterio synonym: " lateral basicranial commissure" EXACT [ZFIN:ZDB-PUB-970819-13] synonym: "lateral commissure " RELATED [ZFIN:ZDB-PUB-970819-13] is_a: ZFA:0001461 ! chondrocranium cartilage -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001580 ! neurocranium -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2017-10-20T11:51:14Z @@ -31698,8 +31714,8 @@ namespace: zebrafish_anatomy def: "Syndesmosis that connects the posterior lateral edge of the epiotic to the posttemporal. The epiotic-posttemporal joint is paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "epioccipital-posttemporal joint" EXACT [] is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T15:00:45Z @@ -31709,8 +31725,8 @@ name: carotid artery canal namespace: zebrafish_anatomy def: "Canal where the carotid artery enters the cranium. Located between the parasphenoid and prootic bones in adult fish." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-25T14:53:32Z @@ -31721,8 +31737,8 @@ namespace: zebrafish_anatomy def: "Syndesmosis that connects the anterior edge epiotic to the parietal. The epiotic-parietal joint is paired." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "epioccipital-parietal" EXACT [] is_a: ZFA:0005156 ! fibrous joint -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T15:30:23Z @@ -31733,8 +31749,8 @@ namespace: zebrafish_anatomy def: "Foramen that has the exoccipital as the anterior and dorsal rim. The occipital forms the anterior rim during early development." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "lateral occipital foramina" EXACT PLURAL [ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T16:00:30Z @@ -31744,8 +31760,8 @@ name: glossopharyngeal foramen namespace: zebrafish_anatomy def: "Foramen in the exoccipital through which the glossopharyngeal nerve (cranial nerve IX) passes." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T16:05:15Z @@ -31755,8 +31771,8 @@ name: vagus foramen namespace: zebrafish_anatomy def: "Foramen in the exoccipital through which the vagus nerve (cranial nerve X) passes." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] is_a: ZFA:0005386 ! foramen -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-20T16:06:35Z @@ -31767,8 +31783,8 @@ namespace: zebrafish_anatomy def: "Chamber in the prootic where the trunks of the trigeminal facial nerve complex pass from the brain to the outside of the cranium. In the adult, a posteromedial extension from the prootic delimits the medial boundary of the trigeminal-facial chamber. The anterior opening of the trigeminal-facial chamber lies between the prootic and the pterosphenoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-192] synonym: "trigeminofacialis chamber" EXACT [] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-10-27T16:53:59Z @@ -31780,9 +31796,9 @@ def: "Longitudinal unpaired muscle that attaches to the base of the most poster synonym: "infracarinalis posterior" EXACT [ZFIN:ZDB-PUB-151106-17, ZFIN:ZDB-PUB-180212-2] synonym: "retractor analis" EXACT [ZFIN:ZDB-PUB-171118-8] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2018-02-12T10:14:25Z @@ -31794,9 +31810,9 @@ def: "Longitudinal muscle that on the anterior end is continuous with the retra synonym: "infracarinalis medius" RELATED [ZFIN:ZDB-PUB-151106-17, ZFIN:ZDB-PUB-180212-2] synonym: "protractor analis" EXACT [ZFIN:ZDB-PUB-171118-8] is_a: ZFA:0005145 ! muscle -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001154 ! anal fin musculature -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2018-02-12T10:37:38Z @@ -31807,9 +31823,9 @@ namespace: zebrafish_anatomy def: "Tissue that lies between the caudal artery and the caudal vein plexus where definitive hematopoiesis occurs after 48hpf and before the hematopoietic progenitors migrate to the thymus and kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-061227-29, ZFIN:ZDB-PUB-070303-37] synonym: "posterior blood island" RELATED [ZFIN:ZDB-PUB-070303-37] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000039 ! Larval:Days 7-13 +relationship: end ZFS:0000039 ! larval:days 7-13 relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Ceri creation_date: 2018-02-21T12:40:50Z @@ -31819,9 +31835,9 @@ name: scale focus namespace: zebrafish_anatomy def: "The initial growth point of the scale. In zebrafish the focus is on the anterior edge of the scale." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180311-2] is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-08-30T16:47:45Z @@ -31832,9 +31848,9 @@ namespace: zebrafish_anatomy def: "Grooves on the scale radiating from the focus. Zebrafish have primary radii that start at the focus and extend to the posterior margin of the scale." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180311-2] synonym: "scale radii" EXACT PLURAL [] is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000277 ! scale -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-08-30T16:50:48Z @@ -31845,9 +31861,9 @@ namespace: zebrafish_anatomy def: "Transient groove in the dorsal eye lined by basal lamina. The groove extends across the dorsal retina to partially separate the nasal and temporal retinal lobes. The sulcus forms soon after optic cup formation and as the eye develops it becomes broader and shallower until it is undetectable." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180310-10] synonym: "dorsal ocular sulcus" EXACT [] is_a: ZFA:0001690 ! groove -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001678 ! immature eye -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites created_by: Ceri creation_date: 2018-09-05T16:23:34Z @@ -31858,9 +31874,9 @@ namespace: zebrafish_anatomy def: "A medial cartilaginous spur that develops from the dorsomedial edge of the palatoquadrate. It is derived from cells located in the maxillary prominence of the first pharyngeal arch and gives rise to the metapterygoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-100726-23, ZFIN:ZDB-PUB-961014-192] synonym: "Ptp" RELATED [] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001399 ! palatoquadrate cartilage -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2018-09-12T09:53:49Z @@ -31870,8 +31886,8 @@ name: cartilaginous projection namespace: zebrafish_anatomy def: "Skeletal tissue that is an extension of a skeletal element composed of cartilage." [GOC:cvs, ORCiD:0000-0002-2244-7917] is_a: ZFA:0005619 ! skeletal tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-09-12T10:11:35Z @@ -31881,9 +31897,9 @@ name: retroarticular process namespace: zebrafish_anatomy def: "A protrusion of cartilage at the posteroventral tip of Meckel's cartilage that gives rise to the retroarticular." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-161203-3] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000037 ! Larval:Day 5 +relationship: end ZFS:0000037 ! larval:day 5 relationship: part_of ZFA:0001205 ! Meckel's cartilage -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-09-12T10:37:59Z @@ -31894,9 +31910,9 @@ namespace: zebrafish_anatomy def: "Cartilaginous protrusion on the posterodorsal region of Meckel's cartilage. The coronoid process of Meckel's cartilage forms the dorsal portion of the articulation with the anteroventral corner of the palatoquadrate." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-060724-1, ZFIN:ZDB-PUB-161203-3] synonym: " coronoid process of Meckel's cartilage" EXACT [] is_a: ZFA:0005903 ! cartilaginous projection -relationship: end ZFS:0000040 ! Larval:Days 14-20 +relationship: end ZFS:0000040 ! larval:days 14-20 relationship: part_of ZFA:0001205 ! Meckel's cartilage -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2018-09-12T14:26:48Z @@ -31906,9 +31922,9 @@ name: Reissner's fiber namespace: zebrafish_anatomy def: "Thread-like fibrous aggregation of secreted molecules extending from the subcommissural organ (SCO) through the ventricular system and central canal to the end of the spinal cord." [GOC:cvs, ISBN:978-0471888895, ZFIN:ZDB-PUB-980205-16] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000938 ! central canal -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2018-11-29T11:06:47Z @@ -31920,9 +31936,9 @@ def: "Neuronal tissue that is the arborization field for the majority of the gan synonym: "synaptic neuropil " RELATED [ZFIN:ZDB-PUB-101101-16] synonym: "tectial lamina" RELATED [ZFIN:ZDB-PUB-081218-37] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000445 ! optic tectum -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2019-01-28T17:08:19Z @@ -31933,8 +31949,8 @@ namespace: zebrafish_anatomy def: "Region the larval brain that is a forerunner of the adult central and superficial pretectal regions. This region is non ventricular neural proliferation zone." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-030115-8, ZFIN:ZDB-PUB-990406-3] synonym: "M1" EXACT [ZFIN:ZDB-PUB-070711-1] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2019-01-29T16:22:51Z @@ -31947,8 +31963,8 @@ synonym: "early migrated posterior tubercular region" RELATED [ZFIN:ZDB-PUB-0707 synonym: "M2" RELATED [ZFIN:ZDB-PUB-070711-1] synonym: "preglomerular anlagen " RELATED [ZFIN:ZDB-PUB-020912-2] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2019-01-29T16:37:24Z @@ -31959,8 +31975,8 @@ namespace: zebrafish_anatomy def: "Portion of tissue that is presumed to give rise to the entopenduncular nucleus." [ZFIN:ZDB-PUB-040304-8, ZFIN:ZDB-PUB-090914-27] synonym: "M3" NARROW [] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000031 ! pharyngula:prim-25 created_by: Ceri creation_date: 2019-01-30T13:02:59Z @@ -31972,8 +31988,8 @@ def: "Portion of tissue that gives rise to the lateral nucleus of the ventral te synonym: "lateral nucleus of area ventralis telencepha" RELATED [ZFIN:ZDB-PUB-090814-14] synonym: "M4" RELATED [ZFIN:ZDB-PUB-090814-14] is_a: ZFA:0001105 ! embryonic structure -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2019-01-30T13:42:52Z @@ -31984,9 +32000,9 @@ namespace: zebrafish_anatomy def: "Pouch at the end of the endolymphatic duct that helps regulates pressure on the inner ear. The endolymphatic sac is separated from the endolymphatic duct by a dynamic lamellar barrier. The lamellar barrier is composed of long, thin lamellar sheets that form tongue-and-groove structure or interwoven broadly overlapping structures. In adults, the endolymphatic duct and sac are partially encased within the temporal bone such that the distal end of the endolymphatic sac protrudes out of the temporal bone into the cranial cavity ." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180622-24] xref: TAO:0002194 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000217 ! inner ear -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown creation_date: 2019-04-16T14:25:54Z [Term] @@ -31995,8 +32011,8 @@ name: urine namespace: zebrafish_anatomy def: "Organism substance that is the output of the nephron." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-050818-17] is_a: ZFA:0001487 ! portion of organism substance -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2019-05-02T16:21:42Z [Term] @@ -32007,9 +32023,9 @@ def: "Iridophore layer of iris composed of a outer layer of regularly tiled iri synonym: "argenta " EXACT PLURAL [] synonym: "iridophore layer iris" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2019-05-29T15:43:36Z @@ -32019,9 +32035,9 @@ name: iris melanophore layer namespace: zebrafish_anatomy def: "Layer of melanophores that are positioned behind the argenta. The melanophore layer absorbs unfocused light preventing it from reaching the retina." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180822-3] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001238 ! iris -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2019-05-29T15:55:27Z @@ -32032,9 +32048,9 @@ namespace: zebrafish_anatomy def: "Iridophore layer that forms along the dorsal region of the poster segment of the eye. The tapetum is formed by a single layer of Iridophores and is proximal to the photoreceptors and is located in the choroid. The tapetum reflects photons back to the photoreceptors if they were not initially absorbed by the photoreceptors." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-180822-3] synonym: "tapetum cellulosum" RELATED [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005229 ! optic choroid -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2019-05-29T16:15:09Z @@ -32045,8 +32061,8 @@ namespace: zebrafish_anatomy def: "Neuromast where the paired hair cells are polarized along the anterior-posterior body axis." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-061205-16] synonym: "anteroposterior oriented neuromast" RELATED [] is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-06-18T10:40:23Z @@ -32057,8 +32073,8 @@ namespace: zebrafish_anatomy def: "Neuromast where the paired hair cells are polarized along the dorsal-ventral body axis." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-061205-16] synonym: "dorsoventral oriented neuromast" RELATED [] is_a: ZFA:0000243 ! neuromast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-06-18T10:44:49Z @@ -32071,8 +32087,8 @@ synonym: "perpendicular posterior lateral line neuromast" EXACT [ZFIN:ZDB-PUB-04 is_a: ZFA:0000940 ! posterior lateral line neuromast is_a: ZFA:0005918 ! dorsal-ventral polarized neuromast relationship: develops_from ZFA:0005116 ! secondary posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec created_by: ceriv creation_date: 2020-06-18T10:46:54Z @@ -32085,8 +32101,8 @@ synonym: "parallel posterior lateral line neuromast" RELATED [ZFIN:ZDB-PUB-04091 is_a: ZFA:0000940 ! posterior lateral line neuromast is_a: ZFA:0005917 ! anterior-posterior polarized neuromast relationship: develops_from ZFA:0005115 ! primary posterior lateral line primordium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-06-18T10:53:53Z @@ -32099,8 +32115,8 @@ subset: cell_slim synonym: "migratory mesenchymal precursor " EXACT [ZFIN:ZDB-PUB-001205-1] synonym: "MMP" RELATED [] is_a: ZFA:0009291 ! muscle precursor cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000027 ! segmentation:20-25 somites creation_date: 2020-07-01T10:51:34Z [Term] @@ -32109,8 +32125,8 @@ name: migratory muscle precursor stream namespace: zebrafish_anatomy def: "Groups of migratory muscle precursor that migrate from a conserved origination in concerted manner along stereotyped path." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000028 ! segmentation:26+ somites created_by: ceriv creation_date: 2020-07-01T11:06:26Z @@ -32121,8 +32137,8 @@ namespace: zebrafish_anatomy def: "Muscle precursor stream that originates from the ventral regions of somites 1-3 and migrates anterior of the pectoral fin bud. Migratory muscle precursor from this stream form the esophageal striated muscle and sternohyoid." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-130709-61] synonym: "first migratory stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:10:27Z @@ -32133,8 +32149,8 @@ namespace: zebrafish_anatomy def: "Muscle precursor stream that originates from the ventral regions of somites 2-4 and migrates toward the pectoral fin bud. Migratory muscle precursors from this stream contribute to the pectoral fin musculature and make a small contribution to the posterior hypaxial muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-190808-2] synonym: "middle migratory muscle precursor stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:14:03Z @@ -32145,8 +32161,8 @@ namespace: zebrafish_anatomy def: "Migratory muscle precursor stream that originates from the ventral regions of somites 5-7 that migrates posterior to the pectoral fin bud. Migratory muscle precursors from this stream form the posterior hypaxial muscle." [GOC:cvs, ORCiD:0000-0002-2244-7917, ZFIN:ZDB-PUB-040908-9, ZFIN:ZDB-PUB-190427-4] synonym: "third migratory stream" RELATED [] is_a: ZFA:0005922 ! migratory muscle precursor stream -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: ceriv creation_date: 2020-07-01T11:17:29Z @@ -32160,10 +32176,10 @@ synonym: "inferior obliquus muscle" BROAD [ZFIN:ZDB-PUB-020913-1] synonym: "PHM" RELATED [] synonym: "ventral-most hypaxial muscle " EXACT [ZFIN:ZDB-PUB-010924-1] is_a: ZFA:0000362 ! hypaxialis -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: has_developmental_contribution_from ZFA:0005924 ! middle migratory muscle precursor stream relationship: has_developmental_contribution_from ZFA:0005925 ! posterior migratory muscle precursor stream -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: ceriv creation_date: 2020-07-01T11:21:03Z @@ -32173,8 +32189,8 @@ name: endothelial blood brain barrier namespace: zebrafish_anatomy def: "Blood vessel endothelium that restricts the passage of circulating substances from the blood to the brain parenchyma while actively facilitating the passage of nutrients and removal of waste products. The developing blood brain barrier undergoes a period of transcytosis and leaks that decrease as the mature form is established. The barrier matures in a posterior to anterior direction." [GOC:cvs, ORCID:000-0002-2244-7917, ZFIN:ZDB-PUB-190821-6] is_a: ZFA:0005259 ! continuous blood vessel endothelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth creation_date: 2020-07-30T10:25:52Z [Term] @@ -32185,8 +32201,8 @@ def: "Lecophores that develop from melanophores. Melanoleucophore are located at subset: cell_slim is_a: ZFA:0009261 ! leucophore relationship: develops_from ZFA:0009091 ! melanocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2020-11-04T13:46:59Z [Term] @@ -32198,8 +32214,8 @@ comment: ZDB-PUB-190912-11 mentions that on the 8th day of development Yellow subset: cell_slim is_a: ZFA:0009261 ! leucophore relationship: develops_from ZFA:0009198 ! xanthophore -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-11-04T14:18:50Z @@ -32209,8 +32225,8 @@ name: lumen namespace: zebrafish_anatomy def: "Anatomical space within a tubular organ, duct, or vessel." [GOC:cvs, https:en.org/wiki/Lumen_(anatomy), ORCID:0000-0002-2244-7917] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2020-11-20T13:39:11Z [Term] @@ -32219,8 +32235,8 @@ name: vascular plexus namespace: zebrafish_anatomy def: "Nonhierarchical network of interconnected vessels. May be the primitive state of a mature vascular structure." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-150418-3] is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: ceriv creation_date: 2020-11-20T14:12:43Z @@ -32230,8 +32246,8 @@ name: developmental vascular plexus namespace: zebrafish_anatomy def: "Transient plexus formed by vasculogenesis that results in the formation of an intermediate network of similar sized vessels with polygonal-shaped avascular spaces. As the vasculature matures it is remodeled into a hierarchical vascular tree." [GOC:cvs, ORCID:0000-0002-2244-7917, PMID:23799579, ZFIN:ZDB-PUB-150418-3] is_a: ZFA:0005931 ! vascular plexus -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: ceriv creation_date: 2020-11-20T14:29:48Z @@ -32243,8 +32259,8 @@ def: "Stable vascular plexus that persist in the adult animal." [GOC:cvs, ORCID: synonym: "capillary plexus" EXACT [] synonym: "mature vascular plexus" EXACT [] is_a: ZFA:0005931 ! vascular plexus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-11-20T14:32:44Z @@ -32255,8 +32271,8 @@ namespace: zebrafish_anatomy def: "Non stereotyped venous plexus derived from specialised angioblast that originate in the floor of the posterior cardinal vein. Emerges from the duct of Cuvier at 2dpf as a reticular structure that spreads bilaterally over the surface of the yolk and gut." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-150418-3, ZFIN:ZDB-PUB-151021-20, ZFIN:ZDB-PUB-151104-9] synonym: "subintestinal plexus" EXACT [] is_a: ZFA:0005931 ! vascular plexus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T14:35:56Z @@ -32268,8 +32284,8 @@ def: "Subintestinal venous plexus that wraps the yolk. Anterior vessels connecte synonym: "yolk plexus" RELATED [] is_a: ZFA:0005932 ! developmental vascular plexus is_a: ZFA:0005934 ! subintestinal venous plexus -relationship: end ZFS:0000039 ! Larval:Days 7-13 -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000039 ! larval:days 7-13 +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T14:41:40Z @@ -32280,8 +32296,8 @@ namespace: zebrafish_anatomy def: "Plexus that wraps the anterior digestive system. These vessels form the permanent, superficial vessels of the digestive system. The left subintestinal vein regresses and empties into the right subintestinal vein." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-151021-20] is_a: ZFA:0005933 ! mature plexus is_a: ZFA:0005934 ! subintestinal venous plexus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: ceriv creation_date: 2020-11-20T14:43:36Z @@ -32292,9 +32308,9 @@ namespace: zebrafish_anatomy def: "Vessels that form connections between the sub intestinal vein and the supraintestinal artery. There are fewer ICVs on the right side of the fish due to the asymmetrical development of the subintestinal veins." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-151104-9] synonym: "ICV" RELATED [] is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0005934 ! subintestinal venous plexus -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: ceriv creation_date: 2020-11-20T15:14:22Z @@ -32304,8 +32320,8 @@ name: inter-organ blood vessel namespace: zebrafish_anatomy def: "Blood vessel that bridge between organs." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-130710-65] is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2020-12-02T09:24:58Z [Term] @@ -32314,8 +32330,8 @@ name: liver pancreas connecting vessel namespace: zebrafish_anatomy def: "Blood vessels that bridge between the liver and pancreas. Four of these vessels have been described, called V1 LP-V4LP. The vessels may be transient or permanent and may make direct or indirect connections between the organ vasculature." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-130710-65] is_a: ZFA:0005938 ! inter-organ blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-02T09:30:41Z @@ -32325,8 +32341,8 @@ name: fibrocartilaginous callus namespace: zebrafish_anatomy def: "Temporary regenerating structure composed of chondrocytes and fibroblast that stabilizes the bone ends at a fracture site. The fibrocartilagionous callus surrounds the bone ends." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190807-16] is_a: ZFA:0005147 ! regenerating tissue -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown creation_date: 2021-01-27T10:34:06Z [Term] @@ -32336,8 +32352,8 @@ namespace: zebrafish_anatomy def: "Temporary regenerating structure wider than the original bone composed of osteoblast and mineralized tissue that replaces the fibrocartilagenous callus at a bone fracture site. The bone callus is eventually remodeled to be the width of the surrounding bone." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190807-16] is_a: ZFA:0005147 ! regenerating tissue relationship: develops_from ZFA:0005940 ! fibrocartilaginous callus -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2021-01-27T10:38:07Z @@ -32345,12 +32361,25 @@ creation_date: 2021-01-27T10:38:07Z id: ZFA:0005942 name: lysosome-rich enterocyte namespace: zebrafish_anatomy -def: "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes ." [GOC:cvs, ORCID:0000-0002-1009-339X, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190903-3] +def: "Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes ." [GOC:cvs, ORCID:0000-0002-1009-339X, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-190903-3] subset: cell_slim is_a: ZFA:0009269 ! enterocyte +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2021-01-27T10:44:40Z +[Term] +id: ZFA:0005943 +name: perivitelline fluid +namespace: zebrafish_anatomy +def: "Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance." [ZFIN:ZDB-PUB-200910-2] +is_a: ZFA:0000020 ! extraembryonic structure +relationship: end ZFS:0000032 ! pharyngula:high-pec +relationship: start ZFS:0000001 ! zygote:1-cell +created_by: ceriv +creation_date: 2021-03-25T15:52:05Z + [Term] id: ZFA:0005944 name: mural cell @@ -32359,12 +32388,174 @@ def: "Cells that localize on the abluminal side of the vascular endothelium that subset: cell_slim xref: CL:0008034 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005249 ! vasculature -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: ceriv creation_date: 2021-01-27T11:37:04Z +[Term] +id: ZFA:0005945 +name: long double cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "red-sensitive cone cell" EXACT [ZFIN:ZDB-PUB-990520-1] +synonym: "unequal double cone cell" RELATED [ZFIN:ZDB-PUB-961014-677] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec +creation_date: 2021-07-09T09:06:25Z + +[Term] +id: ZFA:0005946 +name: short double cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "green-sensitive cone" EXACT [ZFIN:ZDB-PUB-990520-1] +synonym: "unequal double cone cell" RELATED [ZFIN:ZDB-PUB-961014-677] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec +created_by: ceriv +creation_date: 2021-07-09T10:53:10Z + +[Term] +id: ZFA:0005947 +name: long single cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "blue-sensitive cone cell" EXACT [ZFIN:ZDB-PUB-990520-1] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-07-09T11:01:04Z + +[Term] +id: ZFA:0005948 +name: short single cone cell +namespace: zebrafish_anatomy +def: "Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs." [goc:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-961014-677, ZFIN:ZDB-PUB-990520-1] +subset: cell_slim +synonym: "ultraviolet-sensitive cone" EXACT [] +synonym: "UV-sensitive cone" EXACT [ZFIN:ZDB-PUB-990520-1] +is_a: ZFA:0009262 ! retinal cone cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-07-09T11:10:25Z + +[Term] +id: ZFA:0005949 +name: heart lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the heart." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0005844 ! lymph vessel +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0005952 ! heart lymphatic system +relationship: start ZFS:0000041 ! larval:days 21-29 +creation_date: 2021-08-13T11:47:35Z + +[Term] +id: ZFA:0005950 +name: bulbus arteriosus lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +synonym: "outflow tract lymph vessel" EXACT [] +is_a: ZFA:0005949 ! heart lymph vessel +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0000173 ! bulbus arteriosus +relationship: start ZFS:0000041 ! larval:days 21-29 +created_by: ceriv +creation_date: 2021-08-13T11:53:55Z + +[Term] +id: ZFA:0005951 +name: cardiac ventricle lymph vessel +namespace: zebrafish_anatomy +def: "Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0005949 ! heart lymph vessel +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0000009 ! cardiac ventricle +relationship: start ZFS:0000043 ! juvenile:days 45-89 +created_by: ceriv +creation_date: 2021-08-13T11:58:24Z + +[Term] +id: ZFA:0005952 +name: heart lymphatic system +namespace: zebrafish_anatomy +def: "Lymphatic system of the heart." [GOC:CVS, ORCID:0000-0002-2244-7917] +is_a: ZFA:0005811 ! heart vasculature +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T12:23:44Z + +[Term] +id: ZFA:0005953 +name: coronary capillary plexus +namespace: zebrafish_anatomy +def: "Capillary plexus that is located in the heart." [GOC:cvs, ORCID:0000-0002-2244-7917] +is_a: ZFA:0005811 ! heart vasculature +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T12:26:17Z + +[Term] +id: ZFA:0005954 +name: cardiac lymphatic endothelial cluster +namespace: zebrafish_anatomy +def: "Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +synonym: "isolated lymph endothelial cells" EXACT [] +is_a: ZFA:0005955 ! lymphatic endothelial cluster +relationship: end ZFS:0000044 ! adult +relationship: part_of ZFA:0005952 ! heart lymphatic system +relationship: start ZFS:0000043 ! juvenile:days 45-89 +created_by: ceriv +creation_date: 2021-08-13T12:30:04Z + +[Term] +id: ZFA:0005955 +name: lymphatic endothelial cluster +namespace: zebrafish_anatomy +def: "Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191110-11] +is_a: ZFA:0000385 ! lymphatic system +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T12:53:02Z + +[Term] +id: ZFA:0005956 +name: germline stem cell +namespace: zebrafish_anatomy +def: "A stem cell that can give rise to cell types of the germ-line." [ORCID:0000-0002-4142-7153] +subset: cell_slim +xref: CL:0000014 +is_a: ZFA:0005957 ! stem cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T13:44:39Z + +[Term] +id: ZFA:0005957 +name: stem cell +namespace: zebrafish_anatomy +def: "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells." [GOC:tfm] +subset: cell_slim +xref: CL:0000034 +is_a: ZFA:0009000 ! cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown +created_by: ceriv +creation_date: 2021-08-13T13:47:16Z + [Term] id: ZFA:0006000 name: intermediate hypothalamus @@ -32373,9 +32564,9 @@ def: "Brain structure that lies perpendicular to the longitudinal axis of the em synonym: "Hi" EXACT [] xref: TAO:0006000 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000032 ! hypothalamus -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec created_by: giles creation_date: 2009-03-26T02:23:30Z @@ -32388,9 +32579,9 @@ synonym: "saccular macula" EXACT [] xref: TAO:0007000 is_a: ZFA:0000386 ! macula relationship: develops_from ZFA:0000558 ! posterior macula -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000428 ! saccule -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007001 @@ -32402,9 +32593,9 @@ synonym: "dorsorostral cluster" EXACT [] synonym: "drc" EXACT [] xref: TAO:0007001 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000079 ! telencephalon -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0007002 @@ -32416,9 +32607,9 @@ synonym: "ventrorostral cluster" EXACT [] synonym: "vrc" EXACT [] xref: TAO:0007002 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000101 ! diencephalon -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007003 @@ -32430,9 +32621,9 @@ synonym: "ventral caudal cluster" EXACT [] synonym: "ventrocaudal cluster" EXACT [] xref: TAO:0007003 is_a: ZFA:0005575 ! brain nucleus -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000128 ! midbrain -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007004 @@ -32442,9 +32633,9 @@ def: "Early-developing neuronal cluster of the epiphysis. By 24 hpf the pioneer synonym: "ec" EXACT [] xref: TAO:0007004 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000019 ! epiphysis -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007005 @@ -32456,9 +32647,9 @@ synonym: "haemal prezygapophysis" EXACT [] synonym: "hemal prezygopophysis" EXACT [] xref: TAO:0007005 is_a: ZFA:0001591 ! endochondral bone -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000519 ! hemal arch -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007006 @@ -32468,9 +32659,9 @@ def: "Surface structure that is one of the fleshy folds surrounding the opening synonym: "lips" EXACT PLURAL [] xref: TAO:0007006 is_a: ZFA:0000292 ! surface structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000547 ! mouth -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007008 @@ -32482,8 +32673,8 @@ synonym: "ventral intermandibulari anterior" EXACT PLURAL [] xref: TAO:0007008 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007009 @@ -32493,9 +32684,9 @@ def: "A portion of tissue which is a fasciculated group of axons. Many time axon synonym: "nerves" EXACT PLURAL [] xref: TAO:0007009 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007010 @@ -32505,9 +32696,9 @@ def: "Part of the forebrain that is ventral to the ventral thalamus and dorsal t synonym: "eminentia thalami" EXACT [] xref: TAO:0007010 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007011 @@ -32518,9 +32709,9 @@ synonym: "rX" EXACT [] synonym: "vagus root" EXACT [] xref: TAO:0007011 is_a: ZFA:0001663 ! cranial nerve root -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000453 ! cranial nerve X -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007012 @@ -32531,9 +32722,9 @@ synonym: "fasciculus lateralis telencephali" EXACT [ZFIN:ZDB-PUB-961014-1280] synonym: "lateral forebrain bundles" EXACT PLURAL [] xref: TAO:0007012 is_a: ZFA:0001682 ! white matter -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000109 ! forebrain -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007013 @@ -32543,8 +32734,8 @@ def: "Non neural ectoderm that surrounds the presumptive neural plate and gives synonym: "panplacodal ectoderm" EXACT [ZFIN:ZDB-PUB-070122-31] xref: TAO:0007013 is_a: ZFA:0001178 ! non neural ectoderm -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0007014 @@ -32553,9 +32744,9 @@ namespace: zebrafish_anatomy def: "Rostral portion of embryonic tissue that gives rise to the anterior neural plate." [GOC:mh, GOC:ymb, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-9900-7880] xref: TAO:0007014 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000020 ! gastrula:75%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0007015 @@ -32564,9 +32755,9 @@ namespace: zebrafish_anatomy def: "Caudal portion of embryonic tissue that gives rise to the posterior neural plate." [GOC:mh, GOC:ymb, ORCiD:0000-0001-9114-8737, ORCiD:0000-0002-9900-7880] xref: TAO:0007015 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000021 ! gastrula:90%-epiboly relationship: part_of ZFA:0000063 ! presumptive neural plate -relationship: start ZFS:0000019 ! Gastrula:Shield +relationship: start ZFS:0000019 ! gastrula:shield [Term] id: ZFA:0007016 @@ -32576,9 +32767,9 @@ def: "Rostral portion of the neural plate. Develops into the anterior neural ke xref: TAO:0007016 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007014 ! anterior presumptive neural plate -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0007017 @@ -32588,9 +32779,9 @@ def: "Posterior portion of the neural plate that gives rise to the posterior ne xref: TAO:0007017 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007015 ! posterior presumptive neural plate -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007018 @@ -32600,9 +32791,9 @@ def: "Anterior portion of anterior neural plate that gives rise to the forebrain xref: TAO:0007018 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000062 ! presumptive forebrain -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007019 @@ -32612,9 +32803,9 @@ def: "Portion of neural plate that gives rise to the midbrain neural keel." [GO xref: TAO:0007019 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000148 ! presumptive midbrain -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007020 @@ -32625,9 +32816,9 @@ synonym: "diencephalic-mesencephalic boundary neural plate" EXACT [] xref: TAO:0007020 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001368 ! presumptive forebrain midbrain boundary -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0007016 ! anterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007021 @@ -32637,9 +32828,9 @@ def: "Portion of the posterior neural plate that gives rise to the spinal cord n xref: TAO:0007021 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000417 ! presumptive spinal cord -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007022 @@ -32649,9 +32840,9 @@ def: "Portion of posterior neural plate that gives rise to the hindbrain neural xref: TAO:0007022 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0000569 ! presumptive hindbrain -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007017 ! posterior neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007023 @@ -32661,9 +32852,9 @@ def: "Posterior portion of the neural keel that gives rise to the posterior neur xref: TAO:0007023 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007017 ! posterior neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007024 @@ -32673,9 +32864,9 @@ def: "Rostral portion of the neural keel. Develops into the anterior neural rod xref: TAO:0007024 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007016 ! anterior neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007025 @@ -32685,9 +32876,9 @@ def: "Portion of neural keel that gives rise to the midbrain neural rod." [GOC: xref: TAO:0007025 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007019 ! midbrain neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007026 @@ -32697,9 +32888,9 @@ def: "Anterior portion of anterior neural keel that gives rise to the forebrain xref: TAO:0007026 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007018 ! forebrain neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007027 @@ -32710,9 +32901,9 @@ synonym: "diencephalic-mesencephalic boundary neural keel" EXACT [] xref: TAO:0007027 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007020 ! forebrain midbrain boundary neural plate -relationship: end ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000023 ! segmentation:1-4 somites relationship: part_of ZFA:0007024 ! anterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007028 @@ -32721,9 +32912,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural keel that gives rise to the spinal cord neural rod." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007028 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007029 @@ -32733,9 +32924,9 @@ def: "Portion of posterior neural keel that gives rise to the hindbrain neural r xref: TAO:0007029 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007022 ! hindbrain neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007023 ! posterior neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007030 @@ -32745,9 +32936,9 @@ def: "Posterior portion of the neural rod that gives rise to the posterior neura xref: TAO:0007030 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007023 ! posterior neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007031 @@ -32757,9 +32948,9 @@ def: "Rostral portion of the neural rod. Develops into the anterior neural tube xref: TAO:0007031 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007024 ! anterior neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007032 @@ -32769,9 +32960,9 @@ def: "Portion of neural rod that gives rise to the midbrain neural tube." [GOC xref: TAO:0007032 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007025 ! midbrain neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007033 @@ -32782,9 +32973,9 @@ synonym: "diencephalic-mesencephalic boundary neural rod" EXACT [] xref: TAO:0007033 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007027 ! forebrain midbrain boundary neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007034 @@ -32794,9 +32985,9 @@ def: "Anterior portion of anterior neural rod that gives rise to the forebrain n xref: TAO:0007034 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007026 ! forebrain neural keel -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0007031 ! anterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007035 @@ -32805,9 +32996,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural rod that gives rise to the spinal cord neural tube." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007035 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007036 @@ -32817,9 +33008,9 @@ def: "Portion of posterior neural rod that gives rise to the hindbrain neural tu xref: TAO:0007036 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007029 ! hindbrain neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0007030 ! posterior neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007037 @@ -32829,9 +33020,9 @@ def: "Posterior portion of the neural tube that gives rise to the hindbrain and xref: TAO:0007037 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007030 ! posterior neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007038 @@ -32841,9 +33032,9 @@ def: "Rostral portion of the neural tube." [GOC:mh, GOC:ymb, ORCiD:0000-0001-911 xref: TAO:0007038 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007031 ! anterior neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007039 @@ -32853,9 +33044,9 @@ def: "Portion of neural tube that gives rise to the midbrain." [GOC:mh, GOC:ymb xref: TAO:0007039 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007032 ! midbrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007040 @@ -32866,9 +33057,9 @@ synonym: "diencephalic-mesencephalic boundary neural tube" EXACT [] xref: TAO:0007040 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007033 ! forebrain midbrain boundary neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007041 @@ -32878,9 +33069,9 @@ def: "Anterior portion of anterior neural rod that gives rise to the forebrain." xref: TAO:0007041 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007034 ! forebrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007038 ! anterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007042 @@ -32889,9 +33080,9 @@ namespace: zebrafish_anatomy def: "Portion of the posterior neural tube that gives rise to the spinal cord." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] xref: TAO:0007042 is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007043 @@ -32901,9 +33092,9 @@ def: "Portion of posterior neural tube that gives rise to the hindbrain." [GOC:m xref: TAO:0007043 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007036 ! hindbrain neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007037 ! posterior neural tube -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007044 @@ -32914,9 +33105,9 @@ synonym: "midbrain-hindbrain boundary neural plate" EXACT [] xref: TAO:0007044 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0001187 ! presumptive midbrain hindbrain boundary -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007045 @@ -32927,9 +33118,9 @@ synonym: "midbrain-hindbrain boundary neural keel" EXACT [] xref: TAO:0007045 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007044 ! midbrain hindbrain boundary neural plate -relationship: end ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000025 ! segmentation:10-13 somites relationship: part_of ZFA:0000131 ! neural keel -relationship: start ZFS:0000022 ! Gastrula:Bud +relationship: start ZFS:0000022 ! gastrula:bud [Term] id: ZFA:0007046 @@ -32940,9 +33131,9 @@ synonym: "midbrain-hindbrain boundary neural rod" EXACT [] xref: TAO:0007046 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007045 ! midbrain hindbrain boundary neural keel -relationship: end ZFS:0000026 ! Segmentation:14-19 somites +relationship: end ZFS:0000026 ! segmentation:14-19 somites relationship: part_of ZFA:0000133 ! neural rod -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0007047 @@ -32953,9 +33144,9 @@ synonym: "midbrain-hindbrain boundary neural tube" EXACT [] xref: TAO:0007047 is_a: ZFA:0001689 ! anatomical line relationship: develops_from ZFA:0007046 ! midbrain hindbrain boundary neural rod -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001135 ! neural tube -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites [Term] id: ZFA:0007048 @@ -32967,8 +33158,8 @@ synonym: "ventral intermandibulari posterior" EXACT PLURAL [] xref: TAO:0007048 is_a: ZFA:0005145 ! muscle relationship: develops_from ZFA:0000369 ! intermandibularis -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007049 @@ -32978,8 +33169,8 @@ def: "Is a mandibular muscle that forms along the palatoquadrates and inserts on synonym: "dorsal adductor mandibulae" EXACT [] xref: TAO:0007049 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000041 ! Larval:Days 21-29 -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: end ZFS:0000041 ! larval:days 21-29 +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0007050 @@ -32989,8 +33180,8 @@ def: "Dorsal subdivision of the putative mandibular muscle plate. Splits into th synonym: "constrictors dorsalis" EXACT PLURAL [] xref: TAO:0007050 is_a: ZFA:0000236 ! mandibular muscle -relationship: end ZFS:0000035 ! Larval:Protruding-mouth -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000035 ! larval:protruding-mouth +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007051 @@ -33002,8 +33193,8 @@ synonym: "ventral interhyoidei" EXACT PLURAL [] synonym: "ventral interhyoideus" EXACT [] xref: TAO:0007051 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007052 @@ -33013,8 +33204,8 @@ def: "Is a ventral,paired hyoid muscle that inserts at the most anterior basibra synonym: "hyohyal" EXACT [] xref: TAO:0007052 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0007053 @@ -33025,8 +33216,8 @@ synonym: "dorsal adductor hyomandibulae" EXACT [] synonym: "dorsal adductors hyomandibulae" EXACT PLURAL [] xref: TAO:0007053 is_a: ZFA:0000521 ! hyoid muscle -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000034 ! Hatching:Pec-fin +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000034 ! hatching:pec-fin [Term] id: ZFA:0007054 @@ -33041,9 +33232,9 @@ xref: TAO:0007054 is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0000232 ! otic vesicle lateral protrusion relationship: develops_from ZFA:0000469 ! otic vesicle anterior protrusion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000314 ! anterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0007055 @@ -33057,9 +33248,9 @@ synonym: "ventral piller of the semicircular canal" EXACT [] xref: TAO:0007055 is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0001716 ! otic vesicle ventral protrusion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000220 ! lateral semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0007056 @@ -33073,9 +33264,9 @@ synonym: "posterior pillar of the semicircular" EXACT [] is_a: ZFA:0001717 ! pillar of the semicircular canal relationship: develops_from ZFA:0000232 ! otic vesicle lateral protrusion relationship: develops_from ZFA:0000412 ! otic vesicle posterior protrusion -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000262 ! posterior semicircular canal -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0007057 @@ -33087,8 +33278,8 @@ synonym: "ocular vasculature" RELATED [] synonym: "optic vasculature" EXACT [] xref: TAO:0007057 is_a: ZFA:0005297 ! cranial blood vessel -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0007058 @@ -33097,9 +33288,9 @@ namespace: zebrafish_anatomy def: "Multi-tissue structure that is the dorsal-most aspect of the developing neural tube." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0007058 is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 +relationship: end ZFS:0000043 ! juvenile:days 45-89 relationship: part_of ZFA:0000012 ! central nervous system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0007059 @@ -33110,8 +33301,8 @@ synonym: "neurogenic fields" EXACT PLURAL [] xref: TAO:0007059 is_a: ZFA:0001477 ! portion of tissue relationship: develops_from ZFA:0007013 ! preplacodal ectoderm -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000021 ! Gastrula:90%-epiboly +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000021 ! gastrula:90%-epiboly [Term] id: ZFA:0007060 @@ -33121,8 +33312,8 @@ def: "Neurogenic field fated to develop into a dorsolateral placode." [GOC:ymb, synonym: "dorsolateral fields" EXACT PLURAL [] xref: TAO:0007060 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007061 @@ -33132,8 +33323,8 @@ def: "Neurogenic field fated to develop into an epibranchial placode." [GOC:ymb, synonym: "epibranchial fields" EXACT PLURAL [] xref: TAO:0007061 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007062 @@ -33143,8 +33334,8 @@ def: "Neurogenic field fated to develop into the olfactory placode." [GOC:ymb, O synonym: "olfactory fields" EXACT PLURAL [] xref: TAO:0007062 is_a: ZFA:0007059 ! neurogenic field -relationship: end ZFS:0000025 ! Segmentation:10-13 somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000025 ! segmentation:10-13 somites +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0007063 @@ -33154,8 +33345,8 @@ def: "Cranial neural crest that is part of the hindbrain." [GOC:ymb, ORCiD:0000- synonym: "rhombencephalic neural crest" EXACT [] xref: TAO:0007063 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:51:35Z @@ -33166,9 +33357,9 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the mandibular arch." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-061108-6] xref: TAO:0007064 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:53:53Z @@ -33179,9 +33370,9 @@ namespace: zebrafish_anatomy def: "Cranial neural crest that migrates into the hyoid arch." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-061108-6] xref: TAO:0007065 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000028 ! segmentation:26+ somites relationship: part_of ZFA:0007063 ! neural crest hindbrain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-04-29T04:56:12Z @@ -33192,8 +33383,8 @@ namespace: zebrafish_anatomy def: "Cranial neural crest which gives rise to the glossopharyngeal ganglion." [GOC:ymb, ORCiD:0000-0002-9900-7880] xref: TAO:0007066 is_a: ZFA:0001194 ! cranial neural crest -relationship: end ZFS:0000028 ! Segmentation:26+ somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000028 ! segmentation:26+ somites +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2009-11-04T03:39:42Z @@ -33204,8 +33395,8 @@ namespace: zebrafish_anatomy synonym: "gX" EXACT [] xref: TAO:0007067 is_a: ZFA:0001555 ! epibranchial ganglion -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2010-04-21T09:45:38Z @@ -33215,8 +33406,8 @@ name: otic epithelium namespace: zebrafish_anatomy def: "Is an epithelium of the auditory apparatus." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001486 ! epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2011-04-26T12:34:16Z @@ -33226,8 +33417,8 @@ name: otic squamous epithelium namespace: zebrafish_anatomy def: "Is an otic epithelium composed of cells with a squamous morphology." [GOC:ymb, ISBN:019514502X, ORCiD:0000-0002-9900-7880] is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2011-04-26T12:38:05Z @@ -33237,8 +33428,8 @@ name: otic sensory epithelium namespace: zebrafish_anatomy def: "Is an otic epithelium that is a neuroepithelium which is pseudostratified and senses sound." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0007068 ! otic epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne Bradford creation_date: 2011-04-26T12:43:35Z @@ -33248,9 +33439,9 @@ name: flexural organ namespace: zebrafish_anatomy def: "Is a portion of tissue that is the most anterior portion of the notochord. The flexural organ secretes Reissner's fiber-related proteins, including F-spondin." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-120709-5] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000135 ! notochord -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2012-07-18T02:12:26Z @@ -33260,9 +33451,9 @@ name: blood sinus namespace: zebrafish_anatomy def: "Is a multitissue structure that accumulates blood." [GOC:cvs, GOC:ymb, ORCiD:0000-0002-2244-7917, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000010 ! cardiovascular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2014-10-24T02:12:44Z @@ -33273,9 +33464,9 @@ namespace: zebrafish_anatomy def: "An enlarged chamber in the blood sinus capable of accumulating a large volume of blood." [GOC:ymb, ORCiD:0000-0002-9900-7880] synonym: "blood sinus lumen" EXACT [] is_a: ZFA:0001643 ! anatomical space -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007072 ! blood sinus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2014-10-24T02:14:28Z @@ -33285,9 +33476,9 @@ name: maxillary barbel blood sinus namespace: zebrafish_anatomy def: "Is a three-chambered blood sinus found at the base of the maxillary barbel. Responsible, in part, for the movement of the maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140816-6] is_a: ZFA:0007072 ! blood sinus -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001267 ! cranial vasculature -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:18:03Z @@ -33297,9 +33488,9 @@ name: distal bulb of the maxillary blood sinus namespace: zebrafish_anatomy def: "Is a multi-tissue structure forming the smallest chamber of the maxillary barbel blood sinus. It projects into the barbel shaft and has a blood filled lumen, into which extend irregular septa of vascular smooth muscle cells. Additional smooth muscle cells surround the lumen and attach the bulb to the barbel core. Circumferential to the core, there is a thin band of dermal tissue through with run several smaller capillaries and the barbel branch of the of the facial nerve (cranial nerve VII). The entire structure is wrapped by a glandular, stratified epithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:22:04Z @@ -33309,9 +33500,9 @@ name: central chamber of the maxillary blood sinus namespace: zebrafish_anatomy def: "Is a multi-tissue structure that is located outside the maxillary barbel proper and is positioned on the lateral surface of the maxilla, medially attached to the lateral surface of the maxillary bone and is laterally is attached to a hemispheric capsule of dense connective tissue of the distal bulb. It connects with the smaller accessory chamber through a slight isthmus. It has a smooth muscle tunic from which extend luminally projecting muscular septa." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:27:58Z @@ -33321,9 +33512,9 @@ name: accessory chamber of the maxillary blood sinus namespace: zebrafish_anatomy def: "Is a multi-tissue structure part of the maxillary barbel blood sinus which is connected to the central chamber of the maxillary blood sinus by a slight isthmus. It is not muscularized, has no dense connective tissue capsule and is not attached to adjacent bone. Is composed of dark tunica intima wrapped by thick, light tunica adventitia; cells within the adventitia are widely separated, with extended cytoplasmic veils. External to the adventitia, a branch of the facial nerve and several smaller nerve bundles appear in cross section just lateral to the isthmus. These nerves are in the dermis, but outside the sinus." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-140813-6] is_a: ZFA:0001488 ! multi-tissue structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0007074 ! maxillary barbel blood sinus -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:34:40Z @@ -33334,9 +33525,9 @@ namespace: zebrafish_anatomy def: "A blind end lymph vessel that emerges from the maxilla, wraps around the sinus isthmus, then runs alongside the distal bulb to enter the barbel shaft proper." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1, ZFIN:ZDB-PUB-140816-6] synonym: "dorsal maxillary barbel lymph vessel" EXACT [] is_a: ZFA:0005844 ! lymph vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:41:22Z @@ -33347,9 +33538,9 @@ namespace: zebrafish_anatomy def: "Blood vessel that emerges from the maxilla, wraps around the sinus isthmus, then runs alongside the distal bulb to enter the barbel shaft proper. There are two ventral vessels that connect distally in the maxillary barbel forming a complete capillary loop." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1, ZFIN:ZDB-PUB-140816-6] synonym: "ventral maxillary barbel blood vessel" EXACT [] is_a: ZFA:0005314 ! blood vessel -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:46:19Z @@ -33359,9 +33550,9 @@ name: maxillary barbel vasculature namespace: zebrafish_anatomy def: "Is a vasculature that delivers fluid to the maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1] is_a: ZFA:0005249 ! vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:52:05Z @@ -33371,9 +33562,9 @@ name: maxillary barbel proximal plexus namespace: zebrafish_anatomy def: "Is a vascular plexus at the base, or proximal end, of the developing maxillary barbel." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-100121-1, ZFIN:ZDB-PUB-140816-6] is_a: ZFA:0007080 ! maxillary barbel vasculature -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005408 ! maxillary barbel -relationship: start ZFS:0000042 ! Juvenile:Days 30-44 +relationship: start ZFS:0000042 ! juvenile:days 30-44 created_by: yvonne creation_date: 2014-10-24T02:55:07Z @@ -33383,9 +33574,9 @@ name: neural plate border namespace: zebrafish_anatomy def: "Region of the neural plate that will give rise to the neural crest. The neural plate border includes progenitors for the dorsal neural tube, the neural crest, and placodes. It is a broad competence domain, established between neural and non-neural ectoderm within which subtle and sequential cell autonomous and non-cell autonomous molecular interactions will progressively define the neural crest fate from adjacent dorsal neural fates." [GOC:ymb, ORCiD:0000-0002-9900-7880, PMID:22305800] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000132 ! neural plate -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly created_by: yvonne creation_date: 2016-01-28T08:43:28Z @@ -33396,8 +33587,8 @@ namespace: zebrafish_anatomy def: "Premigratory neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000045 ! neural crest relationship: develops_from ZFA:0007082 ! neural plate border -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: yvonne creation_date: 2016-01-28T09:06:50Z @@ -33406,12 +33597,13 @@ id: ZFA:0007084 name: premigratory neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory neural crest cells" EXACT PLURAL [] xref: CL:0007004 is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0007083 ! premigratory neural crest -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: yvonne creation_date: 2016-01-28T09:29:06Z @@ -33422,8 +33614,8 @@ namespace: zebrafish_anatomy def: "Migratory neural crest population that develops from premigratory neural crest. This group of neural crest has undergone ectomesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000045 ! neural crest relationship: develops_from ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-01-28T12:04:14Z @@ -33432,13 +33624,14 @@ id: ZFA:0007086 name: migratory neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory neural crest population. Migratory neural crest cells develop from premigratory neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory neural crest cells" EXACT PLURAL [] xref: CL:0000333 is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0007084 ! premigratory neural crest cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0007085 ! migratory neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-01-28T01:35:09Z @@ -33450,8 +33643,8 @@ def: "Migratory cranial neural crest population that develops from premigratory is_a: ZFA:0001194 ! cranial neural crest is_a: ZFA:0007085 ! migratory neural crest relationship: develops_from ZFA:0007088 ! premigratory cranial neural crest -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-03-07T11:45:15Z @@ -33462,8 +33655,8 @@ namespace: zebrafish_anatomy def: "Premigratory cranial neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001194 ! cranial neural crest is_a: ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000024 ! Segmentation:5-9 somites -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000024 ! segmentation:5-9 somites +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-07T03:27:33Z @@ -33472,10 +33665,11 @@ id: ZFA:0007089 name: embryonic cell namespace: zebrafish_anatomy def: "A cell of the embryo." [CL:curator] +subset: cell_slim xref: CL:0002321 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000034 ! Hatching:Pec-fin -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000034 ! hatching:pec-fin +relationship: start ZFS:0000001 ! zygote:1-cell created_by: yvonne creation_date: 2016-03-30T01:24:36Z @@ -33484,12 +33678,13 @@ id: ZFA:0007090 name: premigratory cranial neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory cranial neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory cranial neural crest cells" EXACT PLURAL [] is_a: ZFA:0007084 ! premigratory neural crest cell is_a: ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000024 ! segmentation:5-9 somites relationship: part_of ZFA:0007088 ! premigratory cranial neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T12:37:58Z @@ -33498,13 +33693,14 @@ id: ZFA:0007091 name: migratory cranial neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory cranial neural crest population. Migratory cranial neural crest cells develop from premigratory cranial neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory cranial neural crest cells" EXACT PLURAL [] xref: CL:0000008 is_a: ZFA:0007086 ! migratory neural crest cell relationship: develops_from ZFA:0007090 ! premigratory cranial neural crest cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0007087 ! migratory cranial neural crest -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites created_by: yvonne creation_date: 2016-03-31T12:43:55Z @@ -33515,8 +33711,8 @@ namespace: zebrafish_anatomy def: "Premigratory trunk neural crest population that develops from the neural plate border. The cells of this group will undergo epithelial to mesenchymal transition and delaminate to produce the migratory trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001024 ! trunk neural crest is_a: ZFA:0007083 ! premigratory neural crest -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000030 ! pharyngula:prim-15 +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:03:25Z @@ -33528,8 +33724,8 @@ def: "Migratory trunk neural crest population that develops from premigratory tr is_a: ZFA:0001024 ! trunk neural crest is_a: ZFA:0007085 ! migratory neural crest relationship: develops_from ZFA:0007092 ! premigratory trunk neural crest -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000031 ! pharyngula:prim-25 +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:11:09Z @@ -33538,12 +33734,13 @@ id: ZFA:0007094 name: premigratory trunk neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the premigratory trunk neural crest population. Will undergo epithelial to mesenchymal transition and delamination to become part of the migratory trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "premigratory trunk neural crest cells" EXACT PLURAL [] is_a: ZFA:0007084 ! premigratory neural crest cell is_a: ZFA:0009004 ! trunk neural crest cell -relationship: end ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000030 ! pharyngula:prim-15 relationship: part_of ZFA:0007092 ! premigratory trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:18:04Z @@ -33552,13 +33749,14 @@ id: ZFA:0007095 name: migratory trunk neural crest cell namespace: zebrafish_anatomy def: "Cell that is part of the migratory trunk neural crest population. Migratory trunk neural crest cells develop from premigratory trunk neural crest cells and have undergone epithelial to mesenchymal transition and delamination." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "migratory trunk neural crest cells" EXACT PLURAL [] xref: CL:0000011 is_a: ZFA:0007086 ! migratory neural crest cell relationship: develops_from ZFA:0007094 ! premigratory trunk neural crest cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0007093 ! migratory trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-03-31T01:22:09Z @@ -33568,8 +33766,8 @@ name: vertebra 13 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 12." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T14:15:01Z @@ -33579,8 +33777,8 @@ name: vertebra 14 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 13." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0001582 ! non-Weberian precaudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T14:22:33Z @@ -33590,8 +33788,8 @@ name: vertebra 15 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 14." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:10:35Z @@ -33601,8 +33799,8 @@ name: vertebra 16 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 15." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:15:45Z @@ -33612,8 +33810,8 @@ name: vertebra 17 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 16." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:17:20Z @@ -33623,8 +33821,8 @@ name: vertebra 18 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 17." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:19:07Z @@ -33634,8 +33832,8 @@ name: vertebra 19 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 18." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:20:46Z @@ -33645,8 +33843,8 @@ name: vertebra 20 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 19." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:22:42Z @@ -33656,8 +33854,8 @@ name: vertebra 21 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 20." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:24:43Z @@ -33667,8 +33865,8 @@ name: vertebra 22 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 21." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:26:15Z @@ -33678,8 +33876,8 @@ name: vertebra 23 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 22." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:29:09Z @@ -33689,8 +33887,8 @@ name: vertebra 24 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 23." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:31:04Z @@ -33700,8 +33898,8 @@ name: vertebra 25 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 24." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:32:40Z @@ -33711,8 +33909,8 @@ name: vertebra 26 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 25." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:34:15Z @@ -33722,8 +33920,8 @@ name: vertebra 27 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 26." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:36:10Z @@ -33733,8 +33931,8 @@ name: vertebra 28 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 27." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:37:40Z @@ -33744,8 +33942,8 @@ name: vertebra 29 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 28." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:39:17Z @@ -33755,8 +33953,8 @@ name: vertebra 30 namespace: zebrafish_anatomy def: "Vertebra that is posteriorly adjacent to vertebra 29." [GOC:ymb, ORCiD:0000-0002-9900-7880] is_a: ZFA:0000326 ! caudal vertebra -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: yvonne creation_date: 2016-10-19T15:41:01Z @@ -33766,8 +33964,8 @@ name: anatomical conduit namespace: zebrafish_anatomy def: "An anatomical structure that is an opening or tube that connects two distinct anatomical spaces." [GOC:ymb, ORCid:0000-0002-9900-7880] is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2018-03-23T11:46:06Z @@ -33777,8 +33975,8 @@ name: pericardial region namespace: zebrafish_anatomy def: "An anatomical cluster composed of the heart and associated structures." [GOC:ymb, ORCid:0000-0002-9900-7880] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2018-03-26T11:52:32Z @@ -33788,8 +33986,8 @@ name: pleuroperitoneal region namespace: zebrafish_anatomy def: "An anatomical cluster composed of the organs of the pleuroperitoneal cavity and associated structures." [GOC:ymb, ORCid:0000-0002-9900-7880] is_a: ZFA:0001478 ! anatomical cluster -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2018-03-26T14:19:43Z @@ -33800,8 +33998,8 @@ namespace: zebrafish_anatomy def: "Joint between Meckel's cartilage and palatoquadrate cartilage." [GOC:ymb, ORCid:0000-0002-9900-7880, ZFIN:ZDB-PUB-151122-6] synonym: "jaw joint" EXACT [] is_a: ZFA:0001596 ! joint -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000033 ! hatching:long-pec created_by: Yvonne creation_date: 2019-04-05T15:06:57Z @@ -33812,9 +34010,9 @@ namespace: zebrafish_anatomy def: "The vertebral body end plate is part of the autocentrum. The anterior and posterior surfaces of the autocentrum constitute the funnel shaped vertebral body end plates. The outer rim of the end plate is the vertebral body growth zone. The anterior and posterior end plates are connected by bony plates that are horizontally attached to the ourter contour of the autocentrum." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-180228-2] synonym: "vertebral body endplate" EXACT [] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000126 ! centrum -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Yvonne creation_date: 2019-04-08T12:21:06Z @@ -33825,9 +34023,9 @@ namespace: zebrafish_anatomy def: "Ligament that connects adjacent vertebra. The intervertebral ligament (IVL) connects the posterior vertebral end plate to the anterior vertebral end plate of adjacent vertebra. For example the IVL connects the posterior end plate of vertebra 14 to the anterior end plate of vertebra 15. It is typically composed of three distinct layers: the notochord sheet which is mainly type II collagen; the outer elastin layer; and a layer of type I collagen fiber bundles." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-180808-7] synonym: "IVL" EXACT [] is_a: ZFA:0001675 ! ligament -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001559 ! vertebral column -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Yvonne creation_date: 2019-04-08T13:27:22Z @@ -33836,13 +34034,14 @@ id: ZFA:0007120 name: cerebrospinal fluid contacting neuron namespace: zebrafish_anatomy def: "Spinal cord interneuron located along the central canal that extends a microvilliated apical process into the cerebrospinal fluid and extends ascending axonal projections ventrally and ipsilaterally. CSF-cNs are GABAergic neurons that express PKD2L1 (TRPP3) channels and have been shown to be chemosensory and mechanosensory, responding to pH and osmolarity changes as well as mechanical stimuli associated with tail bending. CSF-cNs originate from two distinct progenitor domains, p3 and pMN. CSF-cNs project onto caudal primary (CaP motor neurons) and commissural primary ascending (CoPA) sensory interneurons within the escape circuit as well as onto V0-v interneurons within the slow swimming circuit." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-170409-2] +subset: cell_slim synonym: "CSF-cN" EXACT [ZFIN:ZDB-PUB-170409-2] synonym: "CSF-cNs" EXACT PLURAL [ZFIN:ZDB-PUB-170409-2] is_a: ZFA:0000778 ! spinal cord interneuron is_a: ZFA:0009120 ! mechanoreceptor cell is_a: ZFA:0009124 ! chemoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Yvonne creation_date: 2020-03-03T10:15:16Z @@ -33851,12 +34050,13 @@ id: ZFA:0007121 name: ventral cerebrospinal fluid contacting neuron namespace: zebrafish_anatomy def: "A cerebrospinal fluid contacting neuron that originates form p3 progenitor domain. The apical extension of ventral CSF-cNs are more compact than that of dorsal CSF-cNs. Ventral CSF-cNs synapse with CaP motor neurons and project onto CoPA sensory interneurons. Ventral CSF-cNs respond to longitudinal contractions of the spinal cord. Frequently called KA\" neurons." [GOC:ymb, ORDiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-170409-2] +subset: cell_slim synonym: "KA 2" RELATED [] synonym: "ventral CSF-cN" EXACT [ZFIN:ZDB-PUB-170409-2] synonym: "ventral CSF-cNs" EXACT PLURAL [ZFIN:ZDB-PUB-170409-2] is_a: ZFA:0007120 ! cerebrospinal fluid contacting neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites created_by: Yvonne creation_date: 2020-03-03T10:51:35Z @@ -33865,11 +34065,12 @@ id: ZFA:0007122 name: epidermal stem cell namespace: zebrafish_anatomy def: "A stem cell that gives rise to several epidermal cell types, including ionocytes and keratinocytes." [GOC:ymb, ORCiD:0000-0002-9900-7880] +subset: cell_slim synonym: "" RELATED [] xref: CL:1000428 is_a: ZFA:0009020 ! multi fate stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T13:31:57Z @@ -33878,11 +34079,12 @@ id: ZFA:0007123 name: ionocyte progenitor cell namespace: zebrafish_anatomy def: "A cell that will become an ionocyte. Ionocyte progenitor cells develop from epidermal stem cells in the ventral ectoderm that are DeltaC and Tp63 positive." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-190402-19] +subset: cell_slim synonym: "ionocyte progenitor cells" EXACT PLURAL [] is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0007122 ! epidermal stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T14:01:21Z @@ -33891,11 +34093,12 @@ id: ZFA:0007124 name: keratinocyte progenitor cell namespace: zebrafish_anatomy def: "A cell that will become a keratinocyte. Keratinocyte progenitor cells develop from epidermal stem cells in the ventral ectoderm that are DeltaC negative and Tp63 positive." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-190402-19] +subset: cell_slim synonym: "keratinocyte progenitor cells" EXACT PLURAL [] is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0007122 ! epidermal stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Yvonne creation_date: 2020-03-03T14:12:30Z @@ -33906,9 +34109,9 @@ namespace: zebrafish_anatomy def: "A portion of tissue that is the deepest point of the fold of the midbrain hindbrain boundary. In zebrafish the midbrain hindbrain boundary constriction (MHBC) is formed soon after neural tube closure. The MHBC is formed by the bending of the basal side of the neuroepithelium." [GOC:ymb, ORCiD:0000-0002-9900-7880, ZFIN:ZDB-PUB-080825-24] synonym: "MHBC" EXACT [ZFIN:ZDB-PUB-080825-24] is_a: ZFA:0001477 ! portion of tissue -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000042 ! midbrain hindbrain boundary -relationship: start ZFS:0000026 ! Segmentation:14-19 somites +relationship: start ZFS:0000026 ! segmentation:14-19 somites created_by: Yvonne creation_date: 2020-03-04T12:35:25Z @@ -33923,9 +34126,9 @@ xref: CARO:0000013 xref: CL:0000000 xref: TAO:0009000 is_a: ZFA:0000037 ! anatomical structure -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001094 ! whole organism -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0009001 @@ -33936,8 +34139,8 @@ synonym: "receptor cells (sensu Animalia)" EXACT PLURAL [] xref: CL:0000006 xref: TAO:0009001 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009002 @@ -33949,8 +34152,8 @@ synonym: "early embryonic cells" EXACT PLURAL [] xref: CL:0000007 xref: TAO:0009002 is_a: ZFA:0007089 ! embryonic cell -relationship: end ZFS:0000022 ! Gastrula:Bud -relationship: start ZFS:0000001 ! Zygote:1-cell +relationship: end ZFS:0000022 ! gastrula:bud +relationship: start ZFS:0000001 ! zygote:1-cell [Term] id: ZFA:0009003 @@ -33960,9 +34163,9 @@ def: "A cell of the cranial neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] subset: cell_slim synonym: "cranial neural crest cells" EXACT PLURAL [] is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0001194 ! cranial neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009004 @@ -33972,9 +34175,9 @@ def: "A cell of the trunk neural crest." [GOC:ymb, ORCiD:0000-0002-9900-7880] subset: cell_slim synonym: "trunk neural crest cells" EXACT PLURAL [] is_a: ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0001024 ! trunk neural crest -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009005 @@ -33987,9 +34190,9 @@ xref: CL:0000017 xref: TAO:0009005 is_a: ZFA:0009016 ! germ line cell relationship: develops_from ZFA:0009007 ! spermatogonium -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000598 ! testis -relationship: start ZFS:0000043 ! Juvenile:Days 45-89 +relationship: start ZFS:0000043 ! juvenile:days 45-89 [Term] id: ZFA:0009006 @@ -34003,8 +34206,8 @@ synonym: "spermatozoon" EXACT [] xref: CL:0000019 xref: TAO:0009006 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009007 @@ -34018,9 +34221,9 @@ xref: CL:0000020 xref: TAO:0001337 xref: TAO:0009007 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005882 ! spermatogenic cyst -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009009 @@ -34031,8 +34234,8 @@ xref: CL:0000029 xref: TAO:0009009 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009010 @@ -34045,8 +34248,8 @@ xref: TAO:0009010 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009011 @@ -34057,8 +34260,8 @@ synonym: "neuroblasts" EXACT PLURAL [] xref: CL:0000031 xref: TAO:0009011 is_a: ZFA:0009019 ! neuronal stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009012 @@ -34069,8 +34272,8 @@ synonym: "neuroplacodal cells" EXACT PLURAL [] xref: CL:0000032 xref: TAO:0009012 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009013 @@ -34081,8 +34284,8 @@ synonym: "single fate stem cells" EXACT PLURAL [] xref: CL:0000035 xref: TAO:0009013 is_a: ZFA:0009307 ! somatic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009014 @@ -34099,9 +34302,9 @@ xref: CL:0000037 xref: TAO:0009014 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009258 ! angioblastic mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005023 ! hematopoietic system -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009015 @@ -34119,8 +34322,8 @@ xref: CL:0000038 xref: TAO:0009015 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009016 @@ -34132,8 +34335,8 @@ synonym: "germ line cells" EXACT PLURAL [] xref: CL:0000039 xref: TAO:0009016 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009017 @@ -34148,8 +34351,8 @@ xref: CL:0000040 xref: TAO:0009017 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009018 @@ -34162,8 +34365,8 @@ xref: CL:0000042 xref: TAO:0009018 is_a: ZFA:0009353 ! myeloblast relationship: develops_from ZFA:0009352 ! neutrophil progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009019 @@ -34175,8 +34378,8 @@ xref: CL:0000047 xref: TAO:0009019 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009020 @@ -34188,8 +34391,8 @@ synonym: "multipotent stem cell" EXACT [] xref: CL:0000048 xref: TAO:0009020 is_a: ZFA:0009307 ! somatic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009021 @@ -34206,8 +34409,8 @@ xref: CL:0000049 xref: TAO:0009021 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009022 @@ -34221,8 +34424,8 @@ xref: CL:0000050 xref: TAO:0009022 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009023 @@ -34240,8 +34443,8 @@ xref: CL:0000051 xref: TAO:0009023 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009024 @@ -34253,8 +34456,8 @@ synonym: "totipotent stem cells" EXACT PLURAL [] xref: CL:0000052 xref: TAO:0009024 is_a: ZFA:0009307 ! somatic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009025 @@ -34267,8 +34470,8 @@ xref: CL:0000056 xref: TAO:0009025 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009179 ! muscle stem cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009026 @@ -34282,8 +34485,8 @@ xref: CL:0000057 xref: TAO:0009026 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009027 @@ -34298,9 +34501,9 @@ is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009081 ! mesenchymal cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0001501 ! cartilage element -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009028 @@ -34313,8 +34516,8 @@ xref: CL:0000059 xref: TAO:0009028 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0005134 ! dental epithelium -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009029 @@ -34327,9 +34530,9 @@ xref: CL:0000060 xref: TAO:0009029 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005141 ! tooth pulp -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009030 @@ -34341,9 +34544,9 @@ synonym: "cementoblasts" EXACT PLURAL [] xref: CL:0000061 xref: TAO:0009030 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005138 ! dental organ -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009031 @@ -34357,8 +34560,8 @@ xref: TAO:0009031 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell relationship: develops_from ZFA:0009184 ! osteoprogenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009032 @@ -34369,8 +34572,8 @@ synonym: "ciliated cells" EXACT PLURAL [] xref: CL:0000064 xref: TAO:0009032 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009033 @@ -34383,9 +34586,9 @@ xref: CL:0000065 xref: TAO:0009033 is_a: ZFA:0009035 ! ciliated epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009034 @@ -34397,9 +34600,9 @@ synonym: "epithelial cells" EXACT PLURAL [] xref: CL:0000066 xref: TAO:0009034 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001486 ! epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009035 @@ -34411,8 +34614,8 @@ xref: CL:0000067 xref: TAO:0009035 is_a: ZFA:0009032 ! ciliated cell is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009036 @@ -34426,9 +34629,9 @@ is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0005773 ! embryonic blood vessel endothelial progenitor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005257 ! blood vessel endothelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009037 @@ -34439,8 +34642,8 @@ synonym: "barrier epithelial cells" EXACT PLURAL [] xref: CL:0000073 xref: TAO:0009037 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009038 @@ -34451,8 +34654,8 @@ synonym: "columnar/cuboidal epithelial cells" EXACT PLURAL [] xref: CL:0000075 xref: TAO:0009038 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009039 @@ -34463,8 +34666,8 @@ synonym: "squamous epithelial cells" EXACT PLURAL [] xref: CL:0000076 xref: TAO:0009039 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009040 @@ -34477,8 +34680,8 @@ xref: TAO:0009040 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009130 ! lining cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009041 @@ -34489,8 +34692,8 @@ synonym: "peridermal cells" EXACT PLURAL [] xref: CL:0000078 xref: TAO:0009041 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009042 @@ -34502,8 +34705,8 @@ xref: CL:0000079 xref: TAO:0009042 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009180 ! stratified epithelial stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009043 @@ -34515,8 +34718,8 @@ synonym: "circulating cells" EXACT PLURAL [] xref: CL:0000080 xref: TAO:0009043 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009044 @@ -34528,9 +34731,9 @@ synonym: "blood cells" EXACT PLURAL [] xref: CL:0000081 xref: TAO:0009044 is_a: ZFA:0005830 ! hematopoietic cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000007 ! blood -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009045 @@ -34542,8 +34745,8 @@ xref: CL:0000083 xref: TAO:0009045 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009139 ! endodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009046 @@ -34571,8 +34774,8 @@ xref: TAO:0009340 xref: TAO:0009341 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009350 ! pro-T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009047 @@ -34586,8 +34789,8 @@ xref: CL:0000092 xref: TAO:0009047 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009265 ! monocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009048 @@ -34599,8 +34802,8 @@ synonym: "granulocytes" EXACT PLURAL [] xref: CL:0000094 xref: TAO:0009048 is_a: ZFA:0009326 ! myeloid leukocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009049 @@ -34625,8 +34828,8 @@ xref: TAO:0009049 is_a: ZFA:0009327 ! neutrophil relationship: develops_from ZFA:0009254 ! band form neutrophil relationship: develops_from ZFA:0009328 ! immature neutrophil -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009050 @@ -34638,8 +34841,8 @@ xref: CL:0000098 xref: TAO:0009050 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009051 @@ -34651,8 +34854,8 @@ synonym: "interneurons" EXACT PLURAL [] xref: CL:0000099 xref: TAO:0009051 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009052 @@ -34664,8 +34867,8 @@ synonym: "motoneuron" EXACT [] xref: CL:0000100 xref: TAO:0009052 is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009053 @@ -34676,8 +34879,8 @@ subset: cell_slim xref: CL:0000101 xref: TAO:0009053 is_a: ZFA:0009238 ! afferent neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009054 @@ -34688,8 +34891,8 @@ synonym: "polymodal neurons" EXACT PLURAL [] xref: CL:0000102 xref: TAO:0009054 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009055 @@ -34701,9 +34904,9 @@ synonym: "bipolar neurons" EXACT PLURAL [] xref: CL:0000103 xref: TAO:0009055 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009056 @@ -34714,8 +34917,8 @@ synonym: "multipolar neurons" EXACT PLURAL [] xref: CL:0000104 xref: TAO:0009056 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009057 @@ -34726,8 +34929,8 @@ synonym: "pseudounipolar neurons" EXACT PLURAL [] xref: CL:0000105 xref: TAO:0009057 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009058 @@ -34738,8 +34941,8 @@ synonym: "unipolar neurons" EXACT PLURAL [] xref: CL:0000106 xref: TAO:0009058 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009059 @@ -34751,9 +34954,9 @@ xref: CL:0000107 xref: TAO:0009059 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001574 ! autonomic nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009060 @@ -34765,8 +34968,8 @@ synonym: "cholinergic neurons" EXACT PLURAL [] xref: CL:0000108 xref: TAO:0009060 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009061 @@ -34777,8 +34980,8 @@ synonym: "adrenergic neurons" EXACT PLURAL [] xref: CL:0000109 xref: TAO:0009061 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009062 @@ -34789,8 +34992,8 @@ synonym: "peptidergic neurons" EXACT PLURAL [] xref: CL:0000110 xref: TAO:0009062 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009063 @@ -34802,8 +35005,8 @@ xref: CL:0000111 xref: TAO:0009063 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009064 @@ -34815,8 +35018,8 @@ synonym: "mononuclear phagocytes" EXACT PLURAL [] xref: CL:0000113 xref: TAO:0009064 is_a: ZFA:0009357 ! mononuclear cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009065 @@ -34827,8 +35030,8 @@ synonym: "endothelial cells" EXACT PLURAL [] xref: CL:0000115 xref: TAO:0009065 is_a: ZFA:0009130 ! lining cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009066 @@ -34840,9 +35043,9 @@ subset: cell_slim xref: CL:0000116 xref: TAO:0009066 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000029 ! pharyngula:prim-5 relationship: part_of ZFA:0000048 ! olfactory placode -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009067 @@ -34854,8 +35057,8 @@ xref: CL:0000117 xref: TAO:0009067 is_a: ZFA:0009248 ! neuron relationship: develops_from ZFA:0009168 ! neuroblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009068 @@ -34866,8 +35069,8 @@ synonym: "basket cells" EXACT PLURAL [] xref: CL:0000118 xref: TAO:0009068 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009069 @@ -34878,8 +35081,8 @@ synonym: "Golgi cells" EXACT PLURAL [] xref: CL:0000119 xref: TAO:0009069 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009070 @@ -34890,9 +35093,9 @@ synonym: "granule cells" EXACT PLURAL [] xref: CL:0000120 xref: TAO:0009070 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000008 ! brain -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009071 @@ -34905,10 +35108,10 @@ xref: CL:0000121 xref: TAO:0009071 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001706 ! Purkinje cell layer corpus cerebelli relationship: part_of ZFA:0001709 ! Purkinje cell layer valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009072 @@ -34919,8 +35122,8 @@ synonym: "stellate cells" EXACT PLURAL [] xref: CL:0000122 xref: TAO:0009072 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009073 @@ -34934,9 +35137,9 @@ xref: CL:0000125 xref: TAO:0009073 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009010 ! glioblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009074 @@ -34948,8 +35151,8 @@ xref: CL:0000126 xref: TAO:0009074 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009075 @@ -34961,8 +35164,8 @@ synonym: "astrocytes" EXACT PLURAL [] xref: CL:0000127 xref: TAO:0009075 is_a: ZFA:0009074 ! macroglial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009076 @@ -34975,8 +35178,8 @@ xref: CL:0000128 xref: TAO:0009076 is_a: ZFA:0009074 ! macroglial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009077 @@ -34988,8 +35191,8 @@ synonym: "microglia" EXACT [] xref: CL:0000129 xref: TAO:0009077 is_a: ZFA:0009141 ! macrophage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009078 @@ -35002,9 +35205,9 @@ xref: TAO:0009078 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009139 ! endodermal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009079 @@ -35018,9 +35221,9 @@ xref: TAO:0009079 is_a: ZFA:0009039 ! squamous epithelial cell is_a: ZFA:0009065 ! endothelial cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001687 ! corneal endothelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009080 @@ -35032,8 +35235,8 @@ xref: CL:0000133 xref: TAO:0009080 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009137 ! ectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009081 @@ -35046,8 +35249,8 @@ xref: CL:0000134 xref: TAO:0009081 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009082 @@ -35065,9 +35268,9 @@ xref: TAO:0009082 xref: TAO:0009208 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005345 ! adipose tissue -relationship: start ZFS:0000039 ! Larval:Days 7-13 +relationship: start ZFS:0000039 ! larval:days 7-13 [Term] id: ZFA:0009083 @@ -35080,9 +35283,9 @@ xref: CL:0000137 xref: TAO:0009083 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009031 ! osteoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005734 ! lacunocanalicular system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009084 @@ -35096,9 +35299,9 @@ xref: TAO:0009084 is_a: ZFA:0009093 ! GAG secreting cell is_a: ZFA:0009287 ! collagen secreting cell relationship: develops_from ZFA:0009027 ! chondroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001501 ! cartilage element -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009085 @@ -35111,8 +35314,8 @@ xref: CL:0000059 xref: TAO:0009085 is_a: ZFA:0009089 ! simple columnar epithelial cell relationship: develops_from ZFA:0009028 ! ameloblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009086 @@ -35125,8 +35328,8 @@ xref: TAO:0009086 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009029 ! odontoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009087 @@ -35140,9 +35343,9 @@ xref: TAO:0009087 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009030 ! cementoblast relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000694 ! ceratobranchial 5 tooth -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009088 @@ -35155,8 +35358,8 @@ synonym: "APC" EXACT [] xref: CL:0000145 xref: TAO:0009088 is_a: ZFA:0009309 ! leukocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009089 @@ -35167,8 +35370,8 @@ synonym: "simple columnar epithelial cells" EXACT PLURAL [] xref: CL:0000146 xref: TAO:0009089 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009090 @@ -35181,8 +35384,8 @@ synonym: "chromatophore" EXACT [] xref: CL:0000147 xref: TAO:0009090 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009091 @@ -35196,10 +35399,10 @@ xref: CL:0000148 xref: TAO:0009091 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0009249 ! melanoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0005915 ! iris melanophore layer -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009092 @@ -35211,8 +35414,8 @@ synonym: "exocrine cells" EXACT PLURAL [] xref: CL:0000152 xref: TAO:0009092 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009093 @@ -35223,8 +35426,8 @@ synonym: "hyaluronic acid secreting cell" EXACT [] xref: CL:0000153 xref: TAO:0009093 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009094 @@ -35236,9 +35439,9 @@ synonym: "chalice cell" EXACT [] xref: CL:0000160 xref: TAO:0009094 is_a: ZFA:0009159 ! mucus secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001486 ! epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009095 @@ -35249,8 +35452,8 @@ synonym: "acid secreting cells" EXACT PLURAL [] xref: CL:0000161 xref: TAO:0009095 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009096 @@ -35262,9 +35465,9 @@ synonym: "endocrine cells" EXACT PLURAL [] xref: CL:0000163 xref: TAO:0009096 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001158 ! endocrine system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009097 @@ -35276,8 +35479,8 @@ synonym: "enteroendocrine cells" EXACT PLURAL [] xref: CL:0000164 xref: TAO:0009097 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009098 @@ -35290,8 +35493,8 @@ xref: CL:0000165 xref: TAO:0009098 is_a: ZFA:0009096 ! endocrine cell is_a: ZFA:0009190 ! electrically responsive cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009099 @@ -35304,8 +35507,8 @@ xref: CL:0000166 xref: TAO:0009099 is_a: ZFA:0009098 ! neuroendocrine cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009100 @@ -35316,8 +35519,8 @@ synonym: "peptide hormone secreting cells" EXACT PLURAL [] xref: CL:0000167 xref: TAO:0009100 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009101 @@ -35328,8 +35531,8 @@ synonym: "insulin secreting cells" EXACT PLURAL [] xref: CL:0000168 xref: TAO:0009101 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009102 @@ -35340,9 +35543,9 @@ synonym: "beta cell" EXACT [] xref: CL:0000169 xref: TAO:0009102 is_a: ZFA:0009101 ! insulin secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009103 @@ -35353,8 +35556,8 @@ synonym: "glucagon secreting cells" EXACT PLURAL [] xref: CL:0000170 xref: TAO:0009103 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009104 @@ -35365,9 +35568,9 @@ synonym: "alpha cell" EXACT [] xref: CL:0000171 xref: TAO:0009104 is_a: ZFA:0009103 ! glucagon secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001371 ! pancreatic system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009105 @@ -35378,8 +35581,8 @@ synonym: "somatostatin secreting cells" EXACT PLURAL [] xref: CL:0000172 xref: TAO:0009105 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009106 @@ -35390,8 +35593,8 @@ synonym: "steroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000174 xref: TAO:0009106 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009107 @@ -35402,8 +35605,8 @@ synonym: "testosterone secreting cells" EXACT PLURAL [] xref: CL:0000177 xref: TAO:0009107 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009108 @@ -35415,8 +35618,8 @@ synonym: "interstitial cell" EXACT [] xref: CL:0000178 xref: TAO:0009108 is_a: ZFA:0009107 ! testosterone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009109 @@ -35427,8 +35630,8 @@ synonym: "progesterone secreting cells" EXACT PLURAL [] xref: CL:0000179 xref: TAO:0009109 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009110 @@ -35439,8 +35642,8 @@ synonym: "estradiol secreting cells" EXACT PLURAL [] xref: CL:0000180 xref: TAO:0009110 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009111 @@ -35453,9 +35656,9 @@ xref: CL:0000182 xref: TAO:0009111 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0009398 ! hepatoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000123 ! liver -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009112 @@ -35469,8 +35672,8 @@ synonym: "perivascular cells" EXACT [] xref: CL:0000669 xref: TAO:0009112 is_a: ZFA:0005944 ! mural cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009113 @@ -35482,8 +35685,8 @@ xref: CL:0000185 xref: TAO:0009113 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009114 @@ -35497,9 +35700,9 @@ xref: CL:0000187 xref: TAO:0009114 is_a: ZFA:0009190 ! electrically responsive cell relationship: develops_from ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005145 ! muscle -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009115 @@ -35512,9 +35715,9 @@ xref: CL:0000188 xref: TAO:0009115 is_a: ZFA:0005784 ! striated muscle cell relationship: develops_from ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005277 ! skeletal muscle -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009116 @@ -35530,8 +35733,8 @@ xref: TAO:0009116 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0001373 ! migratory slow muscle precursor cell relationship: develops_from ZFA:0009368 ! slow muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009117 @@ -35546,8 +35749,8 @@ xref: CL:0000190 xref: TAO:0009117 is_a: ZFA:0009115 ! skeletal muscle cell relationship: develops_from ZFA:0009369 ! fast muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000024 ! Segmentation:5-9 somites +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000024 ! segmentation:5-9 somites [Term] id: ZFA:0009118 @@ -35559,9 +35762,9 @@ synonym: "non-striated muscle cell" EXACT [] xref: CL:0000192 xref: TAO:0009118 is_a: ZFA:0009114 ! muscle cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005274 ! smooth muscle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009119 @@ -35574,8 +35777,8 @@ synonym: "nocireceptor" EXACT [] xref: CL:0000198 xref: TAO:0009119 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009120 @@ -35587,8 +35790,8 @@ synonym: "mechanoreceptor cells" EXACT PLURAL [] xref: CL:0000199 xref: TAO:0009120 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009121 @@ -35602,8 +35805,8 @@ synonym: "auditory receptor cells" EXACT PLURAL [] xref: CL:0000202 xref: TAO:0009121 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009122 @@ -35622,8 +35825,8 @@ synonym: "thermoreceptor cells" EXACT PLURAL [] xref: CL:0000205 xref: TAO:0009123 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009124 @@ -35635,8 +35838,8 @@ synonym: "chemoreceptor cells" EXACT PLURAL [] xref: CL:0000206 xref: TAO:0009124 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009125 @@ -35649,9 +35852,9 @@ synonym: "Schultze's cell" EXACT [] xref: CL:0000207 xref: TAO:0009125 is_a: ZFA:0009124 ! chemoreceptor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001149 ! olfactory system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009126 @@ -35662,9 +35865,9 @@ synonym: "taste receptor cells" EXACT PLURAL [] xref: CL:0000209 xref: TAO:0009126 is_a: ZFA:0009124 ! chemoreceptor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001074 ! taste bud -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009127 @@ -35676,8 +35879,8 @@ synonym: "photoreceptor cells" EXACT PLURAL [] xref: CL:0000210 xref: TAO:0009127 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009128 @@ -35689,8 +35892,8 @@ synonym: "electrically active cells" EXACT PLURAL [] xref: CL:0000211 xref: TAO:0009128 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009129 @@ -35702,8 +35905,8 @@ synonym: "absorptive cells" EXACT PLURAL [] xref: CL:0000212 xref: TAO:0009129 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009130 @@ -35715,8 +35918,8 @@ synonym: "boundary cell" EXACT [] xref: CL:0000213 xref: TAO:0009130 is_a: ZFA:0009132 ! barrier cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009131 @@ -35729,9 +35932,9 @@ xref: TAO:0009131 is_a: ZFA:0009093 ! GAG secreting cell is_a: ZFA:0009130 ! lining cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005153 ! synovial joint -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009132 @@ -35743,8 +35946,8 @@ synonym: "barrier cells" EXACT PLURAL [] xref: CL:0000215 xref: TAO:0009132 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009133 @@ -35756,9 +35959,9 @@ synonym: "Sertoli cells" EXACT PLURAL [] xref: CL:0000216 xref: TAO:0009133 is_a: ZFA:0009132 ! barrier cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005882 ! spermatogenic cyst -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0009134 @@ -35769,8 +35972,8 @@ synonym: "insulating cells" EXACT PLURAL [] xref: CL:0000217 xref: TAO:0009134 is_a: ZFA:0009132 ! barrier cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009135 @@ -35785,9 +35988,9 @@ is_a: ZFA:0009134 ! insulating cell is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) is_a: ZFA:0009163 ! myelin accumulating cell relationship: develops_from ZFA:0001725 ! immature Schwann cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009136 @@ -35799,8 +36002,8 @@ synonym: "motile cells" EXACT PLURAL [] xref: CL:0000219 xref: TAO:0009136 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009137 @@ -35812,9 +36015,9 @@ synonym: "ectoderm cell" EXACT [] xref: CL:0000221 xref: TAO:0009137 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000016 ! ectoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009138 @@ -35827,9 +36030,9 @@ synonym: "mesoderm cell" EXACT [] xref: CL:0000222 xref: TAO:0009138 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000041 ! mesoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009139 @@ -35841,9 +36044,9 @@ synonym: "endoderm cell" EXACT [] xref: CL:0000223 xref: TAO:0009139 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000035 ! Larval:Protruding-mouth +relationship: end ZFS:0000035 ! larval:protruding-mouth relationship: part_of ZFA:0000017 ! endoderm -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009140 @@ -35855,8 +36058,8 @@ synonym: "phagocytes" EXACT PLURAL [] xref: CL:0000234 xref: TAO:0009140 is_a: ZFA:0009136 ! motile cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009141 @@ -35870,9 +36073,9 @@ xref: TAO:0009141 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009265 ! monocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009142 @@ -35887,8 +36090,8 @@ xref: CL:0000236 xref: TAO:0009142 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009349 ! pro-B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009143 @@ -35899,8 +36102,8 @@ synonym: "brush border epithelial cells" EXACT PLURAL [] xref: CL:0000239 xref: TAO:0009143 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009144 @@ -35911,8 +36114,8 @@ synonym: "stratified squamous epithelial cells" EXACT PLURAL [] xref: CL:0000240 xref: TAO:0009144 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009145 @@ -35923,8 +36126,8 @@ synonym: "stratified cuboidal epithelial cells" EXACT PLURAL [] xref: CL:0000241 xref: TAO:0009145 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009146 @@ -35936,8 +36139,8 @@ synonym: "Merkel cells" EXACT PLURAL [] xref: CL:0000242 xref: TAO:0009146 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009147 @@ -35950,8 +36153,8 @@ xref: CL:0000243 xref: TAO:0009147 is_a: ZFA:0009073 ! glial cell relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009148 @@ -35962,8 +36165,8 @@ synonym: "transitional epithelial cells" EXACT PLURAL [] xref: CL:0000244 xref: TAO:0009148 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009149 @@ -35977,10 +36180,10 @@ xref: CL:0000246 xref: TAO:0009149 is_a: ZFA:0005865 ! reticulospinal neuron is_a: ZFA:0009194 ! CNS short range interneuron -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000545 ! medulla oblongata relationship: part_of ZFA:0001032 ! rhombomere 4 -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009150 @@ -35995,8 +36198,8 @@ synonym: "Rohon-Beard neurons" EXACT PLURAL [] xref: CL:0000247 xref: TAO:0009150 is_a: ZFA:0009053 ! sensory neuron -relationship: end ZFS:0000040 ! Larval:Days 14-20 -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000040 ! larval:days 14-20 +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009151 @@ -36007,8 +36210,8 @@ synonym: "hatching gland cells" EXACT PLURAL [] xref: CL:0000249 xref: TAO:0009151 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009152 @@ -36019,8 +36222,8 @@ synonym: "extramedullary cells" EXACT PLURAL [] xref: CL:0000251 xref: TAO:0009152 is_a: ZFA:0009053 ! sensory neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009153 @@ -36031,9 +36234,9 @@ synonym: "eurydendroid cells" EXACT PLURAL [] xref: CL:0000253 xref: TAO:0009153 is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000603 ! valvula cerebelli -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009154 @@ -36044,10 +36247,10 @@ synonym: "eye photoreceptor cells" EXACT PLURAL [] xref: CL:0000287 xref: TAO:0009154 is_a: ZFA:0009127 ! photoreceptor cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000143 ! retinal photoreceptor layer relationship: part_of ZFA:0001464 ! retinal outer nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009155 @@ -36064,9 +36267,9 @@ synonym: "somatrophic cell" RELATED [] xref: CL:0000295 xref: TAO:0009155 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009156 @@ -36078,9 +36281,9 @@ synonym: "gametes" EXACT PLURAL [] xref: CL:0000300 xref: TAO:0009156 is_a: ZFA:0009016 ! germ line cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000413 ! gonad -relationship: start ZFS:0000041 ! Larval:Days 21-29 +relationship: start ZFS:0000041 ! larval:days 21-29 [Term] id: ZFA:0009157 @@ -36091,8 +36294,8 @@ synonym: "keratin accumulating cells" EXACT PLURAL [] xref: CL:0000311 xref: TAO:0009157 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009158 @@ -36105,8 +36308,8 @@ xref: CL:0000312 xref: TAO:0009158 is_a: ZFA:0009157 ! keratin accumulating cell relationship: develops_from ZFA:0007124 ! keratinocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009159 @@ -36118,10 +36321,10 @@ synonym: "mucous cell" EXACT [] xref: CL:0000319 xref: TAO:0009159 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009160 @@ -36132,8 +36335,8 @@ synonym: "seminal fluid secreting cells" EXACT PLURAL [] xref: CL:0000321 xref: TAO:0009160 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009161 @@ -36155,8 +36358,8 @@ synonym: "extracellular matrix secreting cells" EXACT PLURAL [] xref: CL:0000327 xref: TAO:0009162 is_a: ZFA:0009226 ! stromal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009163 @@ -36167,8 +36370,8 @@ synonym: "myelin accumulating cells" EXACT PLURAL [] xref: CL:0000328 xref: TAO:0009163 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009164 @@ -36179,8 +36382,8 @@ synonym: "oxygen accumulating cells" EXACT PLURAL [] xref: CL:0000329 xref: TAO:0009164 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009165 @@ -36190,9 +36393,9 @@ def: "A cell of the neural crest. The neural crest is a strip of specialized ect subset: cell_slim synonym: "neural crest cells" EXACT PLURAL [] is_a: ZFA:0007089 ! embryonic cell -relationship: end ZFS:0000031 ! Pharyngula:Prim-25 +relationship: end ZFS:0000031 ! pharyngula:prim-25 relationship: part_of ZFA:0000045 ! neural crest -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009166 @@ -36204,8 +36407,8 @@ xref: CL:0000335 xref: TAO:0009166 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009167 @@ -36217,8 +36420,8 @@ xref: CL:0000336 xref: TAO:0009167 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009168 @@ -36228,8 +36431,8 @@ subset: cell_slim xref: CL:0000337 xref: TAO:0009168 is_a: ZFA:0009011 ! neuroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009169 @@ -36240,8 +36443,8 @@ synonym: "glioblasts (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000339 xref: TAO:0009169 is_a: ZFA:0009010 ! glioblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009170 @@ -36252,8 +36455,8 @@ synonym: "pigment cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000342 xref: TAO:0009170 is_a: ZFA:0009090 ! pigment cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009171 @@ -36264,9 +36467,9 @@ synonym: "visual pigment cells (sensu Vertebrata)" EXACT PLURAL [] xref: CL:0000343 xref: TAO:0009171 is_a: ZFA:0009170 ! pigment cell (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000152 ! retina -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 [Term] id: ZFA:0009172 @@ -36289,9 +36492,9 @@ xref: CL:0000345 xref: TAO:0009173 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005140 ! dental papilla -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009174 @@ -36304,9 +36507,9 @@ xref: CL:0000347 xref: TAO:0009174 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005563 ! sclera -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009175 @@ -36319,8 +36522,8 @@ xref: CL:0000348 xref: TAO:0009175 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009003 ! cranial neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009176 @@ -36331,8 +36534,8 @@ synonym: "extraembryonic cells" EXACT PLURAL [] xref: CL:0000349 xref: TAO:0009176 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009177 @@ -36344,9 +36547,9 @@ synonym: "blastomere" RELATED [] xref: CL:0000353 xref: TAO:0009177 is_a: ZFA:0009002 ! early embryonic cell -relationship: end ZFS:0000022 ! Gastrula:Bud +relationship: end ZFS:0000022 ! gastrula:bud relationship: part_of ZFA:0001176 ! blastoderm -relationship: start ZFS:0000016 ! Blastula:30%-epiboly +relationship: start ZFS:0000016 ! blastula:30%-epiboly [Term] id: ZFA:0009178 @@ -36357,8 +36560,8 @@ synonym: "blastemal cells" EXACT PLURAL [] xref: CL:0000354 xref: TAO:0009178 is_a: ZFA:0009020 ! multi fate stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009179 @@ -36370,8 +36573,8 @@ xref: CL:0000355 xref: TAO:0009179 is_a: ZFA:0009013 ! single fate stem cell is_a: ZFA:0009291 ! muscle precursor cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009180 @@ -36382,8 +36585,8 @@ synonym: "stratified epithelial stem cells" EXACT PLURAL [] xref: CL:0000357 xref: TAO:0009180 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009181 @@ -36395,8 +36598,8 @@ xref: CL:0000359 xref: TAO:0009181 is_a: ZFA:0005944 ! mural cell is_a: ZFA:0009118 ! smooth muscle cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009182 @@ -36408,8 +36611,8 @@ synonym: "gastrula cells" EXACT PLURAL [] xref: CL:0000361 xref: TAO:0009182 is_a: ZFA:0009002 ! early embryonic cell -relationship: end ZFS:0000019 ! Gastrula:Shield -relationship: start ZFS:0000017 ! Gastrula:50%-epiboly +relationship: end ZFS:0000019 ! gastrula:shield +relationship: start ZFS:0000017 ! gastrula:50%-epiboly [Term] id: ZFA:0009183 @@ -36421,8 +36624,8 @@ synonym: "epidermal cells" EXACT PLURAL [] xref: CL:0000362 xref: TAO:0009183 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009184 @@ -36434,8 +36637,8 @@ xref: CL:0000375 xref: TAO:0009184 is_a: ZFA:0009013 ! single fate stem cell relationship: develops_from ZFA:0009166 ! mesenchyme condensation cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009185 @@ -36446,8 +36649,8 @@ synonym: "sensory processing neurons" EXACT PLURAL [] xref: CL:0000379 xref: TAO:0009185 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009186 @@ -36458,8 +36661,8 @@ synonym: "neurosecretory neurons" EXACT PLURAL [] xref: CL:0000381 xref: TAO:0009186 is_a: ZFA:0009239 ! efferent neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009187 @@ -36471,8 +36674,8 @@ xref: CL:0000383 xref: TAO:0009187 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009188 @@ -36483,9 +36686,9 @@ synonym: "ligament cells" EXACT PLURAL [] xref: CL:0000384 xref: TAO:0009188 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001675 ! ligament -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009189 @@ -36496,8 +36699,8 @@ synonym: "muscle attachment cell" EXACT [] xref: CL:0000388 xref: TAO:0009189 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009190 @@ -36509,8 +36712,8 @@ synonym: "electrically responsive cells" EXACT PLURAL [] xref: CL:0000393 xref: TAO:0009190 is_a: ZFA:0009128 ! electrically active cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009191 @@ -36523,8 +36726,8 @@ xref: CL:0000402 xref: TAO:0009191 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009193 @@ -36536,8 +36739,8 @@ synonym: "electrically signaling cells" EXACT PLURAL [] xref: CL:0000404 xref: TAO:0009193 is_a: ZFA:0009128 ! electrically active cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009194 @@ -36548,8 +36751,8 @@ synonym: "CNS short range interneurons" EXACT PLURAL [] xref: CL:0000406 xref: TAO:0009194 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009195 @@ -36560,8 +36763,8 @@ synonym: "CNS long range interneurons" EXACT PLURAL [] xref: CL:0000410 xref: TAO:0009195 is_a: ZFA:0009191 ! CNS interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009196 @@ -36572,8 +36775,8 @@ synonym: "hypodermal cells" EXACT PLURAL [] xref: CL:0000411 xref: TAO:0009196 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009198 @@ -36586,9 +36789,9 @@ xref: CL:0000430 xref: TAO:0009198 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005245 ! xanthoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0009199 @@ -36603,11 +36806,11 @@ xref: CL:0000431 xref: TAO:0009199 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005328 ! iridoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument relationship: part_of ZFA:0005914 ! argentum relationship: part_of ZFA:0005916 ! tapetum lucidum -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec [Term] id: ZFA:0009200 @@ -36618,8 +36821,8 @@ synonym: "reticular cells" EXACT PLURAL [] xref: CL:0000432 xref: TAO:0009200 is_a: ZFA:0009026 ! fibroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009201 @@ -36630,8 +36833,8 @@ synonym: "alkali secreting cells" EXACT PLURAL [] xref: CL:0000435 xref: TAO:0009201 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009202 @@ -36644,9 +36847,9 @@ synonym: "gonadotroph" EXACT [] xref: CL:0000437 xref: TAO:0009202 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009203 @@ -36659,9 +36862,9 @@ synonym: "gonadotroph" RELATED [] xref: CL:0000438 xref: TAO:0009203 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009204 @@ -36680,9 +36883,9 @@ synonym: "mammotropic cell" EXACT [] xref: CL:0000439 xref: TAO:0009204 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005580 ! rostral pars anterior -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009205 @@ -36695,9 +36898,9 @@ synonym: "melanotroph" EXACT [] xref: CL:0000440 xref: TAO:0009205 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001197 ! pars intermedia -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009206 @@ -36708,8 +36911,8 @@ synonym: "calcitonin secreting cells" EXACT PLURAL [] xref: CL:0000443 xref: TAO:0009206 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009207 @@ -36719,8 +36922,8 @@ subset: cell_slim synonym: "chief cell" EXACT [] xref: TAO:0009207 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009209 @@ -36733,8 +36936,8 @@ synonym: "veiled cell" RELATED [] xref: CL:0000451 xref: TAO:0009209 is_a: ZFA:0009088 ! professional antigen presenting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009210 @@ -36745,8 +36948,8 @@ synonym: "thyroid hormone secreting cells" EXACT PLURAL [] xref: CL:0000452 xref: TAO:0009210 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009211 @@ -36757,8 +36960,8 @@ synonym: "epinephrin secreting cells" EXACT PLURAL [] xref: CL:0000454 xref: TAO:0009211 is_a: ZFA:0009212 ! biogenic amine secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009212 @@ -36769,8 +36972,8 @@ synonym: "biogenic amine secreting cells" EXACT PLURAL [] xref: CL:0000457 xref: TAO:0009212 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009213 @@ -36781,8 +36984,8 @@ synonym: "serotin secreting cells" EXACT PLURAL [] xref: CL:0000458 xref: TAO:0009213 is_a: ZFA:0009212 ! biogenic amine secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009214 @@ -36795,8 +36998,8 @@ synonym: "norepinephrin secreting cells" EXACT PLURAL [] xref: CL:0000459 xref: TAO:0009214 is_a: ZFA:0009212 ! biogenic amine secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009215 @@ -36807,8 +37010,8 @@ synonym: "glucocorticoid secreting cells" EXACT PLURAL [] xref: CL:0000460 xref: TAO:0009215 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009216 @@ -36824,9 +37027,9 @@ synonym: "corticotropin hormone secreting cell" EXACT [] xref: CL:0000467 xref: TAO:0009216 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005580 ! rostral pars anterior -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009217 @@ -36837,9 +37040,9 @@ synonym: "digestive enzyme secreting cells" EXACT PLURAL [] xref: CL:0000470 xref: TAO:0009217 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009218 @@ -36853,9 +37056,9 @@ synonym: "thyrotroph" EXACT [] xref: CL:0000476 xref: TAO:0009218 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005581 ! proximal pars anterior -relationship: start ZFS:0000033 ! Hatching:Long-pec +relationship: start ZFS:0000033 ! hatching:long-pec [Term] id: ZFA:0009219 @@ -36866,8 +37069,8 @@ synonym: "visible light photoreceptor cells" EXACT PLURAL [] xref: CL:0000488 xref: TAO:0009219 is_a: ZFA:0009127 ! photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009220 @@ -36878,8 +37081,8 @@ synonym: "photopic photoreceptor cells" EXACT PLURAL [] xref: CL:0000490 xref: TAO:0009220 is_a: ZFA:0009219 ! visible light photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009221 @@ -36890,8 +37093,8 @@ synonym: "UV sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000494 xref: TAO:0009221 is_a: ZFA:0009127 ! photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009222 @@ -36902,8 +37105,8 @@ synonym: "blue sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000495 xref: TAO:0009222 is_a: ZFA:0009220 ! photopic photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009223 @@ -36914,8 +37117,8 @@ synonym: "green sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000496 xref: TAO:0009223 is_a: ZFA:0009220 ! photopic photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009224 @@ -36926,8 +37129,8 @@ synonym: "red sensitive photoreceptor cells" EXACT PLURAL [] xref: CL:0000497 xref: TAO:0009224 is_a: ZFA:0009220 ! photopic photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009225 @@ -36938,8 +37141,8 @@ synonym: "inhibitory interneurons" EXACT PLURAL [] xref: CL:0000498 xref: TAO:0009225 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009226 @@ -36952,8 +37155,8 @@ xref: CL:0000499 xref: TAO:0009226 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009227 @@ -36965,8 +37168,8 @@ synonym: "granulosa cells" EXACT PLURAL [] xref: CL:0000501 xref: TAO:0009227 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009228 @@ -36979,9 +37182,9 @@ xref: CL:0000502 xref: TAO:0009228 is_a: ZFA:0009097 ! enteroendocrine cell is_a: ZFA:0009105 ! somatostatin secreting cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000339 ! digestive system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009229 @@ -36994,8 +37197,8 @@ xref: CL:0000503 xref: TAO:0009229 is_a: ZFA:0009226 ! stromal cell is_a: ZFA:0009271 ! androgen secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009230 @@ -37006,8 +37209,8 @@ synonym: "substance P secreting cells" EXACT PLURAL [] xref: CL:0000505 xref: TAO:0009230 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009231 @@ -37018,8 +37221,8 @@ synonym: "enkephalin secreting cells" EXACT PLURAL [] xref: CL:0000506 xref: TAO:0009231 is_a: ZFA:0009232 ! endorphin secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009232 @@ -37030,8 +37233,8 @@ synonym: "endorphin secreting cells" EXACT PLURAL [] xref: CL:0000507 xref: TAO:0009232 is_a: ZFA:0009100 ! peptide hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009233 @@ -37042,8 +37245,8 @@ synonym: "paracrine cells" EXACT PLURAL [] xref: CL:0000512 xref: TAO:0009233 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009234 @@ -37055,8 +37258,8 @@ synonym: "cardioblast" RELATED [] xref: CL:0000513 xref: TAO:0009234 is_a: ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009235 @@ -37068,8 +37271,8 @@ synonym: "satellite cell" RELATED [] xref: CL:0000514 xref: TAO:0009235 is_a: ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009236 @@ -37081,8 +37284,8 @@ synonym: "skeletal muscle myoblasts" EXACT PLURAL [] xref: CL:0000515 xref: TAO:0009236 is_a: ZFA:0009025 ! myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009237 @@ -37095,8 +37298,8 @@ xref: CL:0000516 xref: TAO:0009237 is_a: ZFA:0009147 ! glial cell (sensu Vertebrata) relationship: develops_from ZFA:0009169 ! glioblast (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009238 @@ -37109,8 +37312,8 @@ xref: CL:0000526 xref: TAO:0009238 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009239 @@ -37123,8 +37326,8 @@ xref: CL:0000527 xref: TAO:0009239 is_a: ZFA:0009009 ! neuron neural crest derived is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009240 @@ -37136,8 +37339,8 @@ synonym: "nitrergic neurons" EXACT PLURAL [] xref: CL:0000528 xref: TAO:0009240 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009241 @@ -37149,8 +37352,8 @@ xref: CL:0000529 xref: TAO:0009241 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009242 @@ -37161,9 +37364,9 @@ subset: cell_slim xref: CL:0000530 xref: TAO:0009242 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000038 ! Larval:Day 6 +relationship: end ZFS:0000038 ! larval:day 6 relationship: part_of ZFA:0001120 ! neuroectoderm -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009243 @@ -37176,8 +37379,8 @@ synonym: "caudal primary motoneuron" EXACT [] xref: CL:0000532 xref: TAO:0009243 is_a: ZFA:0009244 ! primary motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009244 @@ -37191,8 +37394,8 @@ xref: CL:0000533 xref: TAO:0009244 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009245 @@ -37204,8 +37407,8 @@ xref: CL:0000534 xref: TAO:0009245 is_a: ZFA:0009051 ! interneuron is_a: ZFA:0009242 ! primary neuron -relationship: end ZFS:0000029 ! Pharyngula:Prim-5 -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000029 ! pharyngula:prim-5 +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009246 @@ -37216,8 +37419,8 @@ synonym: "secondary neurons" EXACT PLURAL [] xref: CL:0000535 xref: TAO:0009246 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009247 @@ -37231,8 +37434,8 @@ xref: CL:0000536 xref: TAO:0009247 is_a: ZFA:0009052 ! motor neuron is_a: ZFA:0009246 ! secondary neuron -relationship: end ZFS:0000043 ! Juvenile:Days 45-89 -relationship: start ZFS:0000028 ! Segmentation:26+ somites +relationship: end ZFS:0000043 ! juvenile:days 45-89 +relationship: start ZFS:0000028 ! segmentation:26+ somites [Term] id: ZFA:0009248 @@ -37246,9 +37449,9 @@ xref: TAO:0009248 is_a: ZFA:0009190 ! electrically responsive cell is_a: ZFA:0009193 ! electrically signaling cell relationship: develops_from ZFA:0009011 ! neuroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000396 ! nervous system -relationship: start ZFS:0000023 ! Segmentation:1-4 somites +relationship: start ZFS:0000023 ! segmentation:1-4 somites [Term] id: ZFA:0009249 @@ -37261,8 +37464,8 @@ xref: CL:0000541 xref: TAO:0009249 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009250 @@ -37275,8 +37478,8 @@ xref: CL:0000542 xref: TAO:0009250 is_a: ZFA:0009357 ! mononuclear cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009251 @@ -37292,8 +37495,8 @@ xref: CL:0000557 xref: TAO:0009251 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009252 @@ -37306,8 +37509,8 @@ xref: CL:0000558 xref: TAO:0009252 is_a: ZFA:0009044 ! blood cell is_a: ZFA:0009325 ! erythroid lineage cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009253 @@ -37320,8 +37523,8 @@ xref: CL:0000559 xref: TAO:0009253 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009017 ! monoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009254 @@ -37338,8 +37541,8 @@ xref: CL:0000560 xref: TAO:0009254 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009268 ! neutrophilic metamyelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009255 @@ -37351,9 +37554,9 @@ synonym: "amacrine neuron" EXACT [] xref: CL:0000561 xref: TAO:0009255 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009256 @@ -37366,8 +37569,8 @@ synonym: "red blood cell" EXACT [] xref: CL:0000562 xref: TAO:0009256 is_a: ZFA:0009044 ! blood cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009257 @@ -37382,8 +37585,8 @@ xref: CL:0000564 xref: TAO:0009257 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009018 ! neutrophilic myeloblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009258 @@ -37395,8 +37598,8 @@ xref: CL:0000566 xref: TAO:0009258 is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009259 @@ -37410,8 +37613,8 @@ xref: TAO:0009259 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009004 ! trunk neural crest cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009260 @@ -37423,8 +37626,8 @@ xref: CL:0000570 xref: TAO:0009260 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009261 @@ -37438,9 +37641,9 @@ xref: CL:0000571 xref: TAO:0009261 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005329 ! leucoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009262 @@ -37452,8 +37655,8 @@ synonym: "retinal cone cells" EXACT PLURAL [] xref: CL:0000573 xref: TAO:0009262 is_a: ZFA:0009154 ! eye photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009263 @@ -37466,9 +37669,9 @@ xref: CL:0000574 xref: TAO:0009263 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005331 ! pigment erythroblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009264 @@ -37479,8 +37682,8 @@ synonym: "corneal epithelial cells" EXACT PLURAL [] xref: CL:0000575 xref: TAO:0009264 is_a: ZFA:0009039 ! squamous epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009265 @@ -37494,8 +37697,8 @@ xref: TAO:0009265 is_a: ZFA:0009064 ! mononuclear phagocyte is_a: ZFA:0009088 ! professional antigen presenting cell relationship: develops_from ZFA:0009253 ! promonocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009266 @@ -37508,8 +37711,8 @@ xref: CL:0000580 xref: TAO:0009266 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009267 @@ -37521,8 +37724,8 @@ synonym: "peritoneal macrophages" EXACT PLURAL [] xref: CL:0000581 xref: TAO:0009267 is_a: ZFA:0009141 ! macrophage -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009268 @@ -37535,8 +37738,8 @@ xref: CL:0000582 xref: TAO:0009268 is_a: ZFA:0009328 ! immature neutrophil relationship: develops_from ZFA:0009266 ! neutrophilic myelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009269 @@ -37548,9 +37751,9 @@ synonym: "enterocytes" EXACT PLURAL [] xref: CL:0000584 xref: TAO:0009269 is_a: ZFA:0009143 ! brush border epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005124 ! intestinal epithelium -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009270 @@ -37562,8 +37765,8 @@ synonym: "odontoclasts" EXACT PLURAL [] xref: CL:0000588 xref: TAO:0009270 is_a: ZFA:0009047 ! osteoclast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009271 @@ -37574,8 +37777,8 @@ synonym: "androgen secreting cells" EXACT PLURAL [] xref: CL:0000593 xref: TAO:0009271 is_a: ZFA:0009106 ! steroid hormone secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009272 @@ -37587,8 +37790,8 @@ synonym: "skeletal muscle satellite cells" EXACT PLURAL [] xref: CL:0000594 xref: TAO:0009272 is_a: ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009273 @@ -37600,8 +37803,8 @@ synonym: "pyramidal cells" EXACT PLURAL [] xref: CL:0000598 xref: TAO:0009273 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009274 @@ -37613,8 +37816,8 @@ synonym: "pressoreceptor cells" EXACT PLURAL [] xref: CL:0000602 xref: TAO:0009274 is_a: ZFA:0009370 ! stretch receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009275 @@ -37626,8 +37829,8 @@ synonym: "retinal rod cells" EXACT PLURAL [] xref: CL:0000604 xref: TAO:0009275 is_a: ZFA:0009154 ! eye photoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009276 @@ -37639,8 +37842,8 @@ synonym: "GABAergic neurons" EXACT PLURAL [] xref: CL:0000617 xref: TAO:0009276 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009277 @@ -37652,8 +37855,8 @@ synonym: "acinar cells" EXACT PLURAL [] xref: CL:0000622 xref: TAO:0009277 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009278 @@ -37668,8 +37871,8 @@ xref: CL:0000623 xref: TAO:0009278 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009348 ! pro-NK cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009279 @@ -37682,8 +37885,8 @@ synonym: "perisinusoidal cell" EXACT [] xref: CL:0000632 xref: TAO:0009279 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009280 @@ -37696,9 +37899,9 @@ synonym: "Muller cells" EXACT PLURAL [] xref: CL:0000636 xref: TAO:0009280 is_a: ZFA:0009075 ! astrocyte -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009281 @@ -37710,9 +37913,9 @@ synonym: "folliculostellate cells" EXACT PLURAL [] xref: CL:0000642 xref: TAO:0009281 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000118 ! hypophysis -relationship: start ZFS:0000027 ! Segmentation:20-25 somites +relationship: start ZFS:0000027 ! segmentation:20-25 somites [Term] id: ZFA:0009282 @@ -37723,8 +37926,8 @@ synonym: "Bergmann glial cells" EXACT PLURAL [] xref: CL:0000644 xref: TAO:0009282 is_a: ZFA:0009075 ! astrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009283 @@ -37736,8 +37939,8 @@ xref: CL:0000650 xref: TAO:0009283 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009081 ! mesenchymal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009284 @@ -37748,9 +37951,9 @@ synonym: "pinealocytes" EXACT PLURAL [] xref: CL:0000652 xref: TAO:0009284 is_a: ZFA:0009096 ! endocrine cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000019 ! epiphysis -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009285 @@ -37761,9 +37964,9 @@ synonym: "podocytes" EXACT PLURAL [] xref: CL:0000653 xref: TAO:0009285 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000163 ! renal system -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009286 @@ -37774,8 +37977,8 @@ synonym: "window cell" EXACT [] xref: CL:0000666 xref: TAO:0009286 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009287 @@ -37786,8 +37989,8 @@ synonym: "collagen secreting cells" EXACT PLURAL [] xref: CL:0000667 xref: TAO:0009287 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009288 @@ -37801,9 +38004,9 @@ xref: CL:0000670 xref: TAO:0009288 is_a: ZFA:0009016 ! germ line cell is_a: ZFA:0009136 ! motile cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000632 ! reproductive system -relationship: start ZFS:0000014 ! Blastula:Sphere +relationship: start ZFS:0000014 ! blastula:sphere [Term] id: ZFA:0009289 @@ -37815,9 +38018,9 @@ synonym: "gut absorptive cells" EXACT PLURAL [] xref: CL:0000677 xref: TAO:0009289 is_a: ZFA:0009129 ! absorptive cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000112 ! gut -relationship: start ZFS:0000025 ! Segmentation:10-13 somites +relationship: start ZFS:0000025 ! segmentation:10-13 somites [Term] id: ZFA:0009290 @@ -37828,8 +38031,8 @@ synonym: "glutamatergic neurons" EXACT PLURAL [] xref: CL:0000679 xref: TAO:0009290 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009291 @@ -37842,8 +38045,8 @@ xref: TAO:0009291 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0000041 ! mesoderm relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000020 ! Gastrula:75%-epiboly +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000020 ! gastrula:75%-epiboly [Term] id: ZFA:0009292 @@ -37857,8 +38060,8 @@ xref: TAO:0009292 is_a: ZFA:0009168 ! neuroblast (sensu Vertebrata) relationship: develops_from ZFA:0001120 ! neuroectoderm relationship: develops_from ZFA:0009306 ! neuroepithelial cell -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009293 @@ -37870,8 +38073,8 @@ synonym: "M cells" EXACT PLURAL [] xref: CL:0000682 xref: TAO:0009293 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009294 @@ -37883,8 +38086,8 @@ synonym: "ependymoglial cells" EXACT PLURAL [] xref: CL:0000683 xref: TAO:0009294 is_a: ZFA:0009075 ! astrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009295 @@ -37896,8 +38099,8 @@ xref: CL:0000686 xref: TAO:0009295 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell relationship: develops_from ZFA:0009165 ! neural crest cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009296 @@ -37909,8 +38112,8 @@ synonym: "perijunctional fibroblasts" EXACT PLURAL [] xref: CL:0000688 xref: TAO:0009296 is_a: ZFA:0009026 ! fibroblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009297 @@ -37921,8 +38124,8 @@ synonym: "stellate interneurons" EXACT PLURAL [] xref: CL:0000691 xref: TAO:0009297 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009298 @@ -37935,9 +38138,9 @@ xref: CL:0000692 xref: TAO:0009298 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009073 ! glial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000142 ! peripheral nervous system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009299 @@ -37949,8 +38152,8 @@ synonym: "spiderweb cell" EXACT [] xref: CL:0000693 xref: TAO:0009299 is_a: ZFA:0009297 ! stellate interneuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009300 @@ -37962,8 +38165,8 @@ synonym: "Cajal-Retzius cells" EXACT PLURAL [] xref: CL:0000695 xref: TAO:0009300 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009301 @@ -37975,8 +38178,8 @@ synonym: "dopaminergic neurons" EXACT PLURAL [] xref: CL:0000700 xref: TAO:0009301 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009302 @@ -37988,8 +38191,8 @@ synonym: "sustentacular cells" EXACT PLURAL [] xref: CL:0000703 xref: TAO:0009302 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009303 @@ -38001,8 +38204,8 @@ synonym: "endothelial tip cells" EXACT PLURAL [] xref: CL:0000704 xref: TAO:0009303 is_a: ZFA:0009036 ! blood vessel endothelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009304 @@ -38014,9 +38217,9 @@ synonym: "choroid plexus epithelial cells" EXACT PLURAL [] xref: CL:0000706 xref: TAO:0009304 is_a: ZFA:0009033 ! ependymal cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001443 ! choroid plexus -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009305 @@ -38029,8 +38232,8 @@ synonym: "leptomeningeal cells" EXACT PLURAL [] xref: CL:0000708 xref: TAO:0009305 is_a: ZFA:0009162 ! extracellular matrix secreting cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009306 @@ -38042,22 +38245,22 @@ xref: CL:0000710 xref: TAO:0009306 is_a: ZFA:0009000 ! cell relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009307 name: somatic stem cell namespace: zebrafish_anatomy -def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:CJM] +def: "A stem cell that can give rise to cell types of the body other than those of the germ-line." [GO:cjm] comment: Definition originally referred to GO:0048103. Changed to GOC: CJM to match other references. subset: cell_slim synonym: "somatic stem cells" EXACT PLURAL [] xref: CL:0000723 xref: TAO:0009307 -is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +is_a: ZFA:0005957 ! stem cell +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009308 @@ -38069,8 +38272,8 @@ synonym: "urothelial cells" EXACT PLURAL [] xref: CL:0000731 xref: TAO:0009308 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009309 @@ -38086,9 +38289,9 @@ xref: TAO:0009309 is_a: ZFA:0005830 ! hematopoietic cell is_a: ZFA:0009136 ! motile cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001159 ! immune system -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009310 @@ -38101,9 +38304,9 @@ synonym: "RGC" EXACT [] xref: CL:0000740 xref: TAO:0009310 is_a: ZFA:0009067 ! CNS neuron (sensu Vertebrata) -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000024 ! retinal ganglion cell layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009311 @@ -38115,8 +38318,8 @@ synonym: "SACMN" EXACT [] xref: CL:0000741 xref: TAO:0009311 is_a: ZFA:0009052 ! motor neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009312 @@ -38128,8 +38331,8 @@ synonym: "periarticular chondrocytes" EXACT PLURAL [] xref: CL:0000742 xref: TAO:0009312 is_a: ZFA:0009084 ! chondrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009313 @@ -38141,8 +38344,8 @@ synonym: "hypertrophic chondrocytes" EXACT PLURAL [] xref: CL:0000743 xref: TAO:0009313 is_a: ZFA:0009084 ! chondrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009314 @@ -38154,8 +38357,8 @@ synonym: "columnar chondrocytes" EXACT PLURAL [] xref: CL:0000744 xref: TAO:0009314 is_a: ZFA:0009084 ! chondrocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009315 @@ -38167,9 +38370,9 @@ synonym: "horizontal cells" EXACT PLURAL [] xref: CL:0000745 xref: TAO:0009315 is_a: ZFA:0009051 ! interneuron -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000119 ! retinal inner nuclear layer -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009316 @@ -38182,10 +38385,10 @@ synonym: "cardiomyocyte" EXACT [] xref: CL:0000746 xref: TAO:0009316 is_a: ZFA:0005784 ! striated muscle cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001319 ! myocardium relationship: part_of ZFA:0005280 ! cardiac muscle -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009317 @@ -38198,9 +38401,9 @@ xref: CL:0000747 xref: TAO:0009317 is_a: ZFA:0009090 ! pigment cell relationship: develops_from ZFA:0005332 ! cyanoblast -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000368 ! integument -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009318 @@ -38211,8 +38414,8 @@ subset: cell_slim xref: CL:0000748 xref: TAO:0009318 is_a: ZFA:0009055 ! bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009319 @@ -38224,8 +38427,8 @@ synonym: "ON-bipolar cells" EXACT PLURAL [] xref: CL:0000749 xref: TAO:0009319 is_a: ZFA:0009318 ! retinal bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009320 @@ -38237,8 +38440,8 @@ synonym: "OFF-bipolar cells" EXACT PLURAL [] xref: CL:0000750 xref: TAO:0009320 is_a: ZFA:0009318 ! retinal bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009321 @@ -38250,8 +38453,8 @@ synonym: "rod bipolar cells" EXACT PLURAL [] xref: CL:0000751 xref: TAO:0009321 is_a: ZFA:0009319 ! ON-bipolar cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009322 @@ -38263,8 +38466,8 @@ synonym: "cone retinal bipolar cells" EXACT PLURAL [] xref: CL:0000752 xref: TAO:0009322 is_a: ZFA:0009318 ! retinal bipolar neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009323 @@ -38279,8 +38482,8 @@ xref: TAO:0009323 is_a: ZFA:0009044 ! blood cell is_a: ZFA:0009324 ! myeloid cell relationship: develops_from ZFA:0009351 ! thromboblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009324 @@ -38293,8 +38496,8 @@ xref: CL:0000763 xref: TAO:0009324 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009325 @@ -38306,8 +38509,8 @@ synonym: "erythroid lineage cells" EXACT PLURAL [] xref: CL:0000764 xref: TAO:0009325 is_a: ZFA:0009324 ! myeloid cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009326 @@ -38321,8 +38524,8 @@ xref: TAO:0009326 is_a: ZFA:0009309 ! leukocyte is_a: ZFA:0009324 ! myeloid cell relationship: develops_from ZFA:0009021 ! common myeloid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009327 @@ -38344,8 +38547,8 @@ synonym: "polynuclear neutrophilic leukocyte" RELATED [] xref: CL:0000775 xref: TAO:0009327 is_a: ZFA:0009048 ! granulocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009328 @@ -38361,8 +38564,8 @@ xref: CL:0000776 xref: TAO:0009328 is_a: ZFA:0009327 ! neutrophil relationship: develops_from ZFA:0009257 ! neutrophilic promyelocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009329 @@ -38375,8 +38578,8 @@ xref: CL:0000778 xref: TAO:0009329 is_a: ZFA:0009047 ! osteoclast is_a: ZFA:0009064 ! mononuclear phagocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009330 @@ -38389,8 +38592,8 @@ xref: CL:0000781 xref: TAO:0009330 is_a: ZFA:0009270 ! odontoclast is_a: ZFA:0009329 ! mononuclear osteoclast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009331 @@ -38407,8 +38610,8 @@ is_a: ZFA:0009088 ! professional antigen presenting cell is_a: ZFA:0009142 ! B cell relationship: develops_from ZFA:0009343 ! immature B cell relationship: develops_from ZFA:0009345 ! transitional stage B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009332 @@ -38421,8 +38624,8 @@ xref: CL:0000786 xref: TAO:0009332 is_a: ZFA:0009250 ! lymphocyte relationship: develops_from ZFA:0009331 ! mature B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009333 @@ -38436,8 +38639,8 @@ synonym: "memory B-lymphocyte" EXACT [] xref: CL:0000787 xref: TAO:0009333 is_a: ZFA:0009331 ! mature B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009334 @@ -38451,8 +38654,8 @@ synonym: "naive B-lymphocyte" EXACT [] xref: CL:0000788 xref: TAO:0009334 is_a: ZFA:0009331 ! mature B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009335 @@ -38466,8 +38669,8 @@ synonym: "alpha-beta T-lymphocyte" EXACT [] xref: CL:0000789 xref: TAO:0009335 is_a: ZFA:0009046 ! T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009336 @@ -38483,8 +38686,8 @@ xref: CL:0000798 xref: TAO:0009336 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009350 ! pro-T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009337 @@ -38499,8 +38702,8 @@ synonym: "immature gamma-delta T-lymphocyte" EXACT [] xref: CL:0000799 xref: TAO:0009337 is_a: ZFA:0009336 ! gamma-delta T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009338 @@ -38515,8 +38718,8 @@ xref: CL:0000800 xref: TAO:0009338 is_a: ZFA:0009336 ! gamma-delta T cell relationship: develops_from ZFA:0009337 ! immature gamma-delta T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009339 @@ -38532,8 +38735,8 @@ synonym: "intraepithelial lymphocyte" RELATED [] xref: CL:0000801 xref: TAO:0009339 is_a: ZFA:0009338 ! mature gamma-delta T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009342 @@ -38548,8 +38751,8 @@ xref: CL:0000813 xref: TAO:0009342 is_a: ZFA:0009046 ! T cell relationship: develops_from ZFA:0009046 ! T cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009343 @@ -38565,8 +38768,8 @@ xref: CL:0000816 xref: TAO:0009343 is_a: ZFA:0009344 ! precursor B cell relationship: develops_from ZFA:0009349 ! pro-B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009344 @@ -38579,8 +38782,8 @@ xref: CL:0000817 xref: TAO:0009344 is_a: ZFA:0009142 ! B cell relationship: develops_from ZFA:0009349 ! pro-B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009345 @@ -38597,8 +38800,8 @@ synonym: "transitional stage B-lymphocyte" EXACT [] xref: CL:0000818 xref: TAO:0009345 is_a: ZFA:0009142 ! B cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009346 @@ -38612,8 +38815,8 @@ xref: CL:0000823 xref: TAO:0009346 is_a: ZFA:0009278 ! natural killer cell relationship: develops_from ZFA:0009348 ! pro-NK cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009347 @@ -38628,8 +38831,8 @@ xref: CL:0000824 xref: TAO:0009347 is_a: ZFA:0009278 ! natural killer cell relationship: develops_from ZFA:0009346 ! immature natural killer cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009348 @@ -38646,8 +38849,8 @@ xref: CL:0000825 xref: TAO:0009348 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009349 @@ -38663,8 +38866,8 @@ xref: CL:0000826 xref: TAO:0009349 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009350 @@ -38680,9 +38883,9 @@ xref: CL:0000827 xref: TAO:0009350 is_a: ZFA:0009355 ! lymphoid progenitor cell relationship: develops_from ZFA:0009023 ! common lymphoid progenitor -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001078 ! thymus -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth [Term] id: ZFA:0009351 @@ -38696,8 +38899,8 @@ xref: CL:0000828 xref: TAO:0009351 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009022 ! megakaryocyte erythroid progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009352 @@ -38709,8 +38912,8 @@ synonym: "neutrophil stem cell" RELATED [] xref: CL:0000834 xref: TAO:0009352 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009353 @@ -38723,8 +38926,8 @@ xref: CL:0000835 xref: TAO:0009353 is_a: ZFA:0009356 ! myeloid lineage restricted progenitor cell relationship: develops_from ZFA:0009251 ! granulocyte monocyte progenitor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009354 @@ -38739,8 +38942,8 @@ xref: CL:0000837 xref: TAO:0009354 is_a: ZFA:0005830 ! hematopoietic cell relationship: develops_from ZFA:0009014 ! hematopoietic stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009355 @@ -38753,8 +38956,8 @@ synonym: "lymphoid progenitor cells" EXACT PLURAL [] xref: CL:0000838 xref: TAO:0009355 is_a: ZFA:0005830 ! hematopoietic cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009356 @@ -38768,8 +38971,8 @@ synonym: "myeloid progenitor cells" EXACT PLURAL [] xref: CL:0000839 xref: TAO:0009356 is_a: ZFA:0005830 ! hematopoietic cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009357 @@ -38781,8 +38984,8 @@ synonym: "mononuclear cells" EXACT PLURAL [] xref: CL:0000842 xref: TAO:0009357 is_a: ZFA:0009309 ! leukocyte -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009358 @@ -38795,8 +38998,8 @@ synonym: "ciliated sensory neuron" EXACT [] xref: CL:0000847 xref: TAO:0009358 is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009359 @@ -38809,8 +39012,8 @@ synonym: "microvillous sensory neuron" RELATED [] xref: CL:0000848 xref: TAO:0009359 is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009360 @@ -38824,8 +39027,8 @@ synonym: "crypt sensory neuron" EXACT [] xref: CL:0000849 xref: TAO:0009360 is_a: ZFA:0009125 ! olfactory receptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009361 @@ -38843,8 +39046,8 @@ xref: CL:0000850 xref: TAO:0009192 xref: TAO:0009361 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009362 @@ -38856,9 +39059,9 @@ synonym: "neuromast mantle cells" EXACT PLURAL [] xref: CL:0000851 xref: TAO:0009362 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009363 @@ -38870,9 +39073,9 @@ synonym: "neuromast support cells" EXACT PLURAL [] xref: CL:0000852 xref: TAO:0009363 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009364 @@ -38884,8 +39087,8 @@ synonym: "olfactory sustentacular cell" EXACT [] xref: CL:0000853 xref: TAO:0009364 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009365 @@ -38898,9 +39101,9 @@ xref: CL:0000854 xref: TAO:0009365 is_a: ZFA:0009080 ! neurectodermal cell relationship: develops_from ZFA:0009012 ! neuroplacodal cell -relationship: end ZFS:0000000 ! Unknown +relationship: end ZFS:0000000 ! unknown relationship: part_of ZFA:0000034 ! lateral line system -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: start ZFS:0000029 ! pharyngula:prim-5 [Term] id: ZFA:0009366 @@ -38912,8 +39115,8 @@ synonym: "hair cells" EXACT PLURAL [] xref: CL:0000855 xref: TAO:0009366 is_a: ZFA:0009120 ! mechanoreceptor cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009367 @@ -38925,9 +39128,9 @@ synonym: "neuromast hair cells" EXACT PLURAL [] xref: CL:0000856 xref: TAO:0009367 is_a: ZFA:0009366 ! hair cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000243 ! neuromast -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009368 @@ -38939,8 +39142,8 @@ synonym: "slow muscle myoblasts" EXACT PLURAL [] xref: CL:0000857 xref: TAO:0009368 is_a: ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009369 @@ -38952,8 +39155,8 @@ synonym: "fast muscle myoblasts" EXACT PLURAL [] xref: CL:0000858 xref: TAO:0009369 is_a: ZFA:0009236 ! skeletal muscle myoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009370 @@ -38964,8 +39167,8 @@ synonym: "stretch receptor cells" EXACT PLURAL [] xref: CL:1000082 xref: TAO:0009370 is_a: ZFA:0009001 ! receptor cell (sensu Animalia) -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009371 @@ -38976,8 +39179,8 @@ synonym: "stratified keratinized epithelial stem cells" EXACT PLURAL [] xref: CL:1000083 xref: TAO:0009371 is_a: ZFA:0009180 ! stratified epithelial stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009372 @@ -38988,9 +39191,9 @@ comment: Definition not present in CL. subset: cell_slim xref: CL:0000068 is_a: ZFA:0009034 ! epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005171 ! duct -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-07-29T05:17:20Z @@ -39003,8 +39206,8 @@ subset: cell_slim xref: CL:0002518 is_a: ZFA:0009034 ! epithelial cell is_a: ZFA:0009389 ! kidney cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009375 @@ -39017,8 +39220,8 @@ xref: CL:0005010 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009374 ! kidney epithelial cell is_a: ZFA:0009388 ! meso-epithelial cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-06T01:42:07Z @@ -39030,8 +39233,8 @@ def: "A cuboidal epithelial cell of the kidney which secretes acid and reabsorbs subset: cell_slim xref: CL:0005011 is_a: ZFA:0009375 ! renal intercalated cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-03-06T01:42:03Z @@ -39043,9 +39246,9 @@ def: "An epithelial cell of the intrahepatic portion of the bile duct." [GOC:tfm subset: cell_slim xref: CL:0002538 is_a: ZFA:0009372 ! duct epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005169 ! intrahepatic bile duct -relationship: start ZFS:0000035 ! Larval:Protruding-mouth +relationship: start ZFS:0000035 ! larval:protruding-mouth created_by: Ceri creation_date: 2013-07-29T05:21:19Z @@ -39057,9 +39260,9 @@ def: "Epithelial cell found in the ducts of the pancreas." [GOC:tfm] subset: cell_slim xref: CL:0002079 is_a: ZFA:0009372 ! duct epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001372 ! pancreatic duct -relationship: start ZFS:0000032 ! Pharyngula:High-pec +relationship: start ZFS:0000032 ! pharyngula:high-pec created_by: Ceri creation_date: 2013-07-29T05:23:07Z @@ -39072,8 +39275,8 @@ subset: cell_slim xref: CL:0002076 is_a: ZFA:0009034 ! epithelial cell relationship: develops_from ZFA:0000017 ! endoderm -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-02T04:25:16Z @@ -39089,8 +39292,8 @@ xref: CL:0000710 is_a: ZFA:0009038 ! columnar/cuboidal epithelial cell is_a: ZFA:0009385 ! ecto-epithelial cell relationship: develops_from ZFA:0009080 ! neurectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009385 @@ -39102,8 +39305,8 @@ xref: CL:0002077 is_a: ZFA:0009034 ! epithelial cell is_a: ZFA:0009386 ! somatic cell relationship: develops_from ZFA:0009137 ! ectodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009386 @@ -39113,8 +39316,8 @@ def: "A cell of an organism that does not pass on its genetic material to the or subset: cell_slim xref: CL:0002371 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009387 @@ -39124,8 +39327,8 @@ def: "A cell whose primary function is to support other cell types." [FB:ma, GOC subset: cell_slim xref: CL:0000630 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009388 @@ -39138,8 +39341,8 @@ xref: CL:0002078 is_a: ZFA:0009034 ! epithelial cell is_a: ZFA:0009386 ! somatic cell relationship: develops_from ZFA:0009138 ! mesodermal cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009389 @@ -39149,9 +39352,9 @@ def: "Cell that is part of the kidney." [GOC:cvs, ORCiD:0000-0002-2244-7917] subset: cell_slim xref: CL:1000497 is_a: ZFA:0009386 ! somatic cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000529 ! kidney -relationship: start ZFS:0000037 ! Larval:Day 5 +relationship: start ZFS:0000037 ! larval:day 5 [Term] id: ZFA:0009390 @@ -39161,8 +39364,8 @@ subset: cell_slim xref: CL:1000500 is_a: ZFA:0009389 ! kidney cell is_a: ZFA:0009392 ! connective tissue cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009391 @@ -39171,8 +39374,8 @@ namespace: zebrafish_anatomy subset: cell_slim xref: CL:1000504 is_a: ZFA:0009389 ! kidney cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009392 @@ -39182,8 +39385,8 @@ def: "A cell of the supporting or framework tissue of the body, arising chiefly subset: cell_slim xref: CL:0002320 is_a: ZFA:0009386 ! somatic cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009393 @@ -39194,8 +39397,8 @@ comment: Usually express Prox1, or prox1b. subset: cell_slim xref: CL:0005020 is_a: ZFA:0009020 ! multi fate stem cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-12T04:44:34Z @@ -39208,8 +39411,8 @@ subset: cell_slim xref: CL:0005021 is_a: ZFA:0009081 ! mesenchymal cell is_a: ZFA:0009393 ! lymphangioblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-12T05:01:22Z @@ -39222,8 +39425,8 @@ subset: cell_slim synonym: "parachordal lymphangioblast" NARROW [] xref: CL:0005022 is_a: ZFA:0009393 ! lymphangioblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2012-01-12T05:21:09Z @@ -39235,8 +39438,8 @@ def: "The neurons that utilize glycine as a neurotransmitter." [MP:0010385] subset: cell_slim xref: CL:1001509 is_a: ZFA:0009248 ! neuron -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown [Term] id: ZFA:0009397 @@ -39249,8 +39452,8 @@ synonym: "epithelial cell of bile duct" EXACT [] xref: CL:1000488 is_a: ZFA:0009372 ! duct epithelial cell relationship: develops_from ZFA:0009398 ! hepatoblast -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2013-08-02T12:08:01Z @@ -39262,8 +39465,8 @@ def: "Multi fate stem cell that gives rise to both hepatocytes and cholangiocyte subset: cell_slim is_a: ZFA:0009020 ! multi fate stem cell relationship: develops_from ZFA:0000124 ! liver primordium -relationship: end ZFS:0000000 ! Unknown -relationship: start ZFS:0000029 ! Pharyngula:Prim-5 +relationship: end ZFS:0000000 ! unknown +relationship: start ZFS:0000029 ! pharyngula:prim-5 created_by: Ceri creation_date: 2013-08-02T12:13:12Z @@ -39275,9 +39478,9 @@ def: "An epithelial cell of the intestine." [GOC:tfm] subset: cell_slim xref: CL:0002563 is_a: ZFA:0009383 ! endo-epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0001338 ! intestine -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2013-08-02T04:26:27Z @@ -39289,9 +39492,9 @@ def: "An epithelial cell of the esophagus." [GOC:tfm] subset: cell_slim xref: CL:0002252 is_a: ZFA:0009383 ! endo-epithelial cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000204 ! esophagus -relationship: start ZFS:0000030 ! Pharyngula:Prim-15 +relationship: start ZFS:0000030 ! pharyngula:prim-15 created_by: Ceri creation_date: 2013-08-02T04:32:14Z @@ -39300,11 +39503,12 @@ id: ZFA:0009401 name: lens fiber cell namespace: zebrafish_anatomy def: "A vertebrate lens cell that is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye." [GOC:nv] +subset: cell_slim xref: CL:0011004 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0000035 ! lens -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: Ceri creation_date: 2017-09-01T15:46:37Z @@ -39316,9 +39520,9 @@ def: "Cell that is part of the heart valve." [CL:editor] subset: cell_slim xref: CL:1000147 is_a: ZFA:0009000 ! cell -relationship: end ZFS:0000044 ! Adult +relationship: end ZFS:0000044 ! adult relationship: part_of ZFA:0005065 ! heart valve -relationship: start ZFS:0000000 ! Unknown +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-08T09:32:56Z @@ -39330,21 +39534,22 @@ def: "Cells that secrete the extracellular matrix of the heart valve." [GOC:cvs, subset: cell_slim synonym: "VIC" RELATED [ZFIN:ZDB-PUB-191202-2] is_a: ZFA:0009402 ! heart valve cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-08T09:43:48Z [Term] id: ZFA:0009404 -name: heart valve endothelial cells +name: heart valve endothelial cell namespace: zebrafish_anatomy def: "Endothelial cells that surround the heart valve extracellular matrix." [GOC:cvs, ORCID:0000-0002-2244-7917, ZFIN:ZDB-PUB-191202-2] subset: cell_slim +synonym: "heart valve endocardial cell" EXACT [ZFIN:ZDB-PUB-200221-32] synonym: "VEC" RELATED [ZFIN:ZDB-PUB-191202-2] is_a: ZFA:0009402 ! heart valve cell -relationship: end ZFS:0000044 ! Adult -relationship: start ZFS:0000000 ! Unknown +relationship: end ZFS:0000044 ! adult +relationship: start ZFS:0000000 ! unknown created_by: ceriv creation_date: 2020-12-08T09:48:24Z @@ -39355,367 +39560,466 @@ namespace: zebrafish_anatomy [Term] id: ZFS:0000000 -name: Unknown +name: unknown namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-050211-1 xref: ZFIN:ZDB-TERM-100331-2430 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage [Term] id: ZFS:0000001 -name: Zygote:1-cell +name: zygote:1-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-4 xref: ZFIN:ZDB-TERM-100331-2431 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage [Term] id: ZFS:0000002 -name: Cleavage:2-cell +name: cleavage:2-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-15 xref: ZFIN:ZDB-TERM-100331-2432 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000003 -name: Cleavage:4-cell +name: cleavage:4-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-11 xref: ZFIN:ZDB-TERM-100331-2433 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000004 -name: Cleavage:8-cell +name: cleavage:8-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-33 xref: ZFIN:ZDB-TERM-100331-2434 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000005 -name: Cleavage:16-cell +name: cleavage:16-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-20 xref: ZFIN:ZDB-TERM-100331-2435 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000006 -name: Cleavage:32-cell +name: cleavage:32-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-25 xref: ZFIN:ZDB-TERM-100331-2436 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000007 -name: Cleavage:64-cell +name: cleavage:64-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-28 xref: ZFIN:ZDB-TERM-100331-2437 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000046 ! cleavage [Term] id: ZFS:0000008 -name: Blastula:128-cell +name: blastula:128-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-7 xref: ZFIN:ZDB-TERM-100331-2438 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000009 -name: Blastula:256-cell +name: blastula:256-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-1 xref: ZFIN:ZDB-TERM-100331-2439 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000010 -name: Blastula:512-cell +name: blastula:512-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-14 xref: ZFIN:ZDB-TERM-100331-2440 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000011 -name: Blastula:1k-cell +name: blastula:1k-cell namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-22 xref: ZFIN:ZDB-TERM-100331-2441 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000012 -name: Blastula:High +name: blastula:high namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-27 xref: ZFIN:ZDB-TERM-100331-2442 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000013 -name: Blastula:Oblong +name: blastula:oblong namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-24 xref: ZFIN:ZDB-TERM-100331-2443 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000014 -name: Blastula:Sphere +name: blastula:sphere namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-21 xref: ZFIN:ZDB-TERM-100331-2444 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000015 -name: Blastula:Dome +name: blastula:dome namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-19 xref: ZFIN:ZDB-TERM-100331-2445 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000016 -name: Blastula:30%-epiboly +name: blastula:30%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-17 xref: ZFIN:ZDB-TERM-100331-2446 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000045 ! blastula [Term] id: ZFS:0000017 -name: Gastrula:50%-epiboly +name: gastrula:50%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-6 xref: ZFIN:ZDB-TERM-100331-2447 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000018 -name: Gastrula:Germ-ring +name: gastrula:germ-ring namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-3 xref: ZFIN:ZDB-TERM-100331-2448 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000019 -name: Gastrula:Shield +name: gastrula:shield namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-2 xref: ZFIN:ZDB-TERM-100331-2449 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000020 -name: Gastrula:75%-epiboly +name: gastrula:75%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-18 xref: ZFIN:ZDB-TERM-100331-2450 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000021 -name: Gastrula:90%-epiboly +name: gastrula:90%-epiboly namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-29 xref: ZFIN:ZDB-TERM-100331-2451 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000022 -name: Gastrula:Bud +name: gastrula:bud namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-12 xref: ZFIN:ZDB-TERM-100331-2452 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000047 ! gastrula [Term] id: ZFS:0000023 -name: Segmentation:1-4 somites +name: segmentation:1-4 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-23 xref: ZFIN:ZDB-TERM-100331-2453 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000024 -name: Segmentation:5-9 somites +name: segmentation:5-9 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-5 xref: ZFIN:ZDB-TERM-100331-2454 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000025 -name: Segmentation:10-13 somites +name: segmentation:10-13 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-020626-1 xref: ZFIN:ZDB-TERM-100331-2455 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000026 -name: Segmentation:14-19 somites +name: segmentation:14-19 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-30 xref: ZFIN:ZDB-TERM-100331-2456 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000027 -name: Segmentation:20-25 somites +name: segmentation:20-25 somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-16 xref: ZFIN:ZDB-TERM-100331-2457 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000028 -name: Segmentation:26+ somites +name: segmentation:26+ somites namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-34 xref: ZFIN:ZDB-TERM-100331-2458 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000049 ! segmentation [Term] id: ZFS:0000029 -name: Pharyngula:Prim-5 +name: pharyngula:prim-5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-10 xref: ZFIN:ZDB-TERM-100331-2439 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000030 -name: Pharyngula:Prim-15 +name: pharyngula:prim-15 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-32 xref: ZFIN:ZDB-TERM-100331-2460 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000031 -name: Pharyngula:Prim-25 +name: pharyngula:prim-25 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-13 xref: ZFIN:ZDB-TERM-100331-2461 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000032 -name: Pharyngula:High-pec +name: pharyngula:high-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-31 xref: ZFIN:ZDB-TERM-100331-2462 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000050 ! pharyngula [Term] id: ZFS:0000033 -name: Hatching:Long-pec +name: hatching:long-pec namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-9 xref: ZFIN:ZDB-TERM-100331-2463 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0007000 ! hatching [Term] id: ZFS:0000034 -name: Hatching:Pec-fin +name: hatching:pec-fin namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-26 xref: ZFIN:ZDB-TERM-100331-2464 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0007000 ! hatching [Term] id: ZFS:0000035 -name: Larval:Protruding-mouth +name: larval:protruding-mouth namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-8 xref: ZFIN:ZDB-TERM-100331-2465 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000036 -name: Larval:Day 4 +name: larval:day 4 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-35 xref: ZFIN:ZDB-TERM-100331-2466 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000037 -name: Larval:Day 5 +name: larval:day 5 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-36 xref: ZFIN:ZDB-TERM-100331-2467 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000038 -name: Larval:Day 6 +name: larval:day 6 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-37 xref: ZFIN:ZDB-TERM-100331-2468 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000039 -name: Larval:Days 7-13 +name: larval:days 7-13 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-47 xref: ZFIN:ZDB-TERM-100331-2469 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000040 -name: Larval:Days 14-20 +name: larval:days 14-20 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-48 xref: ZFIN:ZDB-TERM-100331-2470 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000041 -name: Larval:Days 21-29 +name: larval:days 21-29 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-49 xref: ZFIN:ZDB-TERM-100331-2471 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000048 ! larva [Term] id: ZFS:0000042 -name: Juvenile:Days 30-44 +name: juvenile:days 30-44 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-51 xref: ZFIN:ZDB-TERM-100331-2472 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000051 ! juvenile [Term] id: ZFS:0000043 -name: Juvenile:Days 45-89 +name: juvenile:days 45-89 namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-52 xref: ZFIN:ZDB-TERM-100331-2473 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: part_of ZFS:0000051 ! juvenile [Term] id: ZFS:0000044 -name: Adult +name: adult namespace: zebrafish_stages xref: ZFIN:ZDB-STAGE-010723-39 xref: ZFIN:ZDB-TERM-100331-2474 -is_a: ZFS:0100000 ! Stages +is_a: ZFS:0100000 ! zebrafish stage + +[Term] +id: ZFS:0000045 +name: blastula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000046 ! cleavage + +[Term] +id: ZFS:0000046 +name: cleavage +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage + +[Term] +id: ZFS:0000047 +name: gastrula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000045 ! blastula + +[Term] +id: ZFS:0000048 +name: larva +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0007000 ! hatching + +[Term] +id: ZFS:0000049 +name: segmentation +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000047 ! gastrula + +[Term] +id: ZFS:0000050 +name: pharyngula +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000049 ! segmentation + +[Term] +id: ZFS:0000051 +name: juvenile +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000048 ! larva + +[Term] +id: ZFS:0007000 +name: hatching +namespace: zebrafish_stages +is_a: ZFS:0100000 ! zebrafish stage +relationship: immediately_preceded_by ZFS:0000050 ! pharyngula +created_by: yvonne +creation_date: 2014-11-05T08:33:09Z [Term] id: ZFS:0100000 -name: Stages +name: zebrafish stage namespace: zebrafish_stages [Typedef] @@ -39757,6 +40061,13 @@ xref: BFO:0000051 is_transitive: true is_a: overlaps ! overlaps +[Typedef] +id: immediately_preceded_by +name: immediately_preceded_by +def: "X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y)." [goc:cjm] +xref: RO:0002087 +is_a: preceded_by ! preceded_by + [Typedef] id: overlaps name: overlaps @@ -39770,6 +40081,13 @@ is_transitive: true is_a: overlaps ! overlaps inverse_of: has_part ! has_part +[Typedef] +id: preceded_by +name: preceded_by +def: "X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X)." [goc:cjm] +xref: BFO:0000062 +is_transitive: true + [Typedef] id: start name: start stage diff --git a/zfa.owl b/zfa.owl index 5e6d160..f488580 100644 --- a/zfa.owl +++ b/zfa.owl @@ -12,21 +12,22 @@ xmlns:terms="http://purl.org/dc/terms/" xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"> - + + + ZFA description. Zebrafish Anatomy Ontology (ZFA) - OBO-Edit 2.3.1 - 08:03:2021 11:16 + OBO-Edit 2.3-beta5 + 29:11:2022 16:29 zebrafish_anatomical_ontology 1.2 - ceriv + zfinf CARO part_of NCBITaxon:7955 CL part_of NCBITaxon:7955 TAO part_of NCBITaxon:7955 VSAO part_of NCBITaxon:7955 - SVN version: $Revision: 1.100$ - 2022-03-15 + 2022-12-09 @@ -302,6 +303,46 @@ + + + + + X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X). + BFO:0000062 + zebrafish_anatomical_ontology + preceded_by + preceded_by + preceded_by + + + + + X preceded_by Y iff: end(Y) before_or_simultaneous_with start(X). + goc:cjm + + + + + + + + + X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y). + RO:0002087 + zebrafish_anatomical_ontology + immediately_preceded_by + immediately_preceded_by + immediately_preceded_by + + + + + X immediately_preceded_by Y iff: end(X) simultaneous_with start(Y). + goc:cjm + + + + @@ -7902,7 +7943,7 @@ Brain structure which is one of three parts of the cerebellum and is the entry point for a posterior cerebellar tract that carries cerebellar afferents from many brain stem nuclei. From Neuroanatomy of the Zebrafish Brain. TAO:0000188 cerebellar corpus - corpus cerebelli granular layer + corpus cerebelli granular layer corpus cerebellum zebrafish_anatomy ZFA:0000188 @@ -7919,7 +7960,7 @@ - corpus cerebelli granular layer + corpus cerebelli granular layer ZFIN:ZDB-PUB-961014-1280 @@ -10016,18 +10057,18 @@ ZFA:0000239 mesocoracoid bone - - - - Endochondral bone that articulates laterally with the medial surface of the cleithrum and ventro-medially with the scapula and coracoid. Mesocoracoid bone is a small, arch-like bone that develops from the mesocoracoid cartilage. Mesocoracoid bone is paired. - TAO:WD - mesocoracoid bones + + + + Endochondral bone that articulates laterally with the medial surface of the cleithrum and ventro-medially with the scapula and coracoid. Mesocoracoid bone is a small, arch-like bone that develops from the mesocoracoid cartilage. Mesocoracoid bone is paired. + TAO:WD + @@ -10873,7 +10914,7 @@ One of eight distinct lateral lines in the 4-day larva consisting of 2 neuromast. One neuromast is positioned at the front edge of the jaw the second posteriorly on the mandible. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -11990,7 +12031,7 @@ Paired, deep caudal fin muscles that originate from the 30th vertebra and extend toward the dorsal base of the caudal fin where they insert broadly on fin rays. TAO:0000287 - flexor caudalis dorsalis superioris + flexor caudalis dorsalis superioris superior dorsal flexor zebrafish_anatomy CDS @@ -14260,7 +14301,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned posterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -16347,7 +16388,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned dorsal to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -17365,7 +17406,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned posteriorly to the second arch skeletal element. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -18109,7 +18150,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva consisting of three neuromast positioned superior to the eye. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:JCN 421-:189-198 + ZFIN:ZDB-PUB-000523-3 @@ -18437,7 +18478,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Portion of tissue, located on the upper jaw that defines the caudal extent of the labial cavity. The oral valves control the flow of water into the mouth during routine respiration. TAO:0000451 maxillary valve - upper semilunar valve + upper semilunar valve zebrafish_anatomy breathing valve buccal valve @@ -18454,7 +18495,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. - upper semilunar valve + upper semilunar valve ZFIN:ZDB-PUB-060921-12 @@ -18966,7 +19007,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva positioned anterior to the ear. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -20382,7 +20423,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Mandibular muscle that inserts along the dorsolateral faces of the opercles. Responsible for opercular abduction. TAO:0000498 - dilatator opercula + dilatator opercula zebrafish_anatomy dilator opercula dilators operculi @@ -20940,7 +20981,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. LVII lobus facialis zebrafish_anatomy - tuberculum impar of Herrick + tuberculum impar of Herrick ZFA:0000512 facial lobe @@ -21473,7 +21514,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. One of eight distinct lateral lines in the 4-day larva consistingo of four neuromast that are positioned inferior or posterior to the eye A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 - ZFIN:<new dbxref> + ZFIN:ZDB-PUB-000523-3 @@ -22476,7 +22517,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000549 postemporal zebrafish_anatomy - post-temporal + post-temporal ZFA:0000549 posttemporal @@ -24217,7 +24258,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000588 auditory ganglion gVIII - octaval ganglion + octaval ganglion sag statoacoustic ganglia zebrafish_anatomy @@ -24683,7 +24724,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. Multi-tissue structure that is part of the midbrain and develops from the alar plate. The torus semicircularis is located dorsal to the lateral tegmentum where it extends into the medial tectal ventricle and receives ascending sensory octavolateralis input. TAO:0000599 - semicircular torus + semicircular torus zebrafish_anatomy ZFA:0000599 torus semicircularis @@ -25036,7 +25077,7 @@ part of the entopeduncular nucleus (ENv). ZDB-PUB-090814-14. TAO:0000608 transverse ventralis - transversus ventralis + transversus ventralis zebrafish_anatomy ZFA:0000608 ventral transverse @@ -33324,7 +33365,7 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - Portion of somite 16 that gives rise to body wall muscle masses. + Portion of somite 26 that gives rise to body wall muscle masses. TAO:0000807 zebrafish_anatomy ZFA:0000807 @@ -33334,7 +33375,7 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - Portion of somite 16 that gives rise to body wall muscle masses. + Portion of somite 26 that gives rise to body wall muscle masses. GOC:ymb ORCiD:0000-0002-9900-7880 ZFIN:ZDB-PUB-961014-576 @@ -38967,19 +39008,22 @@ The motor neuron cell bodies arise in rhombomeres 2 and 3. The neurons in r2 ext - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) TAO:0000944 pll zebrafish_anatomy + midbody lateral line + midtrunk line ZFA:0000944 posterior lateral line - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The posterior lateral line runs along the horizontal myoseptum from the otic vessicle to the caudal fin. Lateral lines form a sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 + ZFIN:ZDB-PUB-110811-14 @@ -53867,7 +53911,7 @@ The ciliary "body" does not contain processes or a cumferential band o tunica muscularis - http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html + http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html @@ -74287,7 +74331,7 @@ The epithelium exists before becoming folded into the rosette. - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) TAO:0005112 dorsal lateral lines zebrafish_anatomy @@ -74297,9 +74341,10 @@ The epithelium exists before becoming folded into the rosette. - One of eight distinct lateral lines in the 4-day larva. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) + One of eight distinct lateral lines in the 4-day larva. The dorsal line runs along the dorsal side of the body and never extends beyond the dorsal fin. A sensory system on the surface of the fish, consisting of small sensory patches (neuromasts) distributed in discrete lines over the body surface. The lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance. (See Anatomical Atlas entry for <a href='http://zfin.org/zf_info/anatomy/dict/lat_line/lat_line.html'>lateral line</a> by T. Whitfield.) GOC:ymb ORCiD:0000-0002-9900-7880 + ZFIN:ZDB-PUB-070907-34 @@ -75128,7 +75173,7 @@ The epithelium exists before becoming folded into the rosette. tunica serosa - http://www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html + http:/www.vivo.colostate.edu/hbooks/pathphys/digestion/basics/gi_microanatomy.html @@ -99470,6 +99515,7 @@ This may be the same as CoBL. 2013-09-30T03:31:51Z zebrafish_anatomy ZFA:0005768 + trigeminal sensory neuron @@ -99548,6 +99594,7 @@ This may be the same as CoBL. 2013-11-05T11:05:25Z zebrafish_anatomy ZFA:0005770 + crypt neuron olfactory support cell @@ -99656,6 +99703,7 @@ This may be the same as CoBL. CL:0002546 zebrafish_anatomy ZFA:0005773 + embryonic blood vessel endothelial progenitor cell @@ -99735,6 +99783,7 @@ This may be the same as CoBL. CL:0007011 zebrafish_anatomy ZFA:0005775 + enteric neuron @@ -99774,6 +99823,7 @@ This may be the same as CoBL. CL:0011102 zebrafish_anatomy ZFA:0005776 + parasympathetic neuron @@ -99813,6 +99863,7 @@ This may be the same as CoBL. CL:0011103 zebrafish_anatomy ZFA:0005777 + sympathetic neuron @@ -99847,6 +99898,7 @@ This may be the same as CoBL. zebrafish_anatomy orexin secreting neuron ZFA:0005778 + hypocretin-secreting neuron @@ -100078,6 +100130,7 @@ This may be the same as CoBL. CL:0000737 zebrafish_anatomy ZFA:0005784 + striated muscle cell @@ -100186,6 +100239,7 @@ This may be the same as CoBL. 2014-03-25T09:31:29Z zebrafish_anatomy ZFA:0005786 + cleft cell @@ -103486,6 +103540,7 @@ this previously described vessel is connected to, or derived from, the FL networ 2016-01-12T10:33:08Z zebrafish_anatomy ZFA:0005865 + reticulospinal neuron @@ -103521,6 +103576,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy V ZFA:0005866 + vestibulospinal neuron @@ -103841,6 +103897,7 @@ this previously described vessel is connected to, or derived from, the FL networ 2016-03-23T01:14:15Z zebrafish_anatomy ZFA:0005874 + spiral neuron @@ -104009,6 +104066,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0000024 zebrafish_anatomy ZFA:0005878 + oogonia @@ -106592,7 +106650,19 @@ this previously described vessel is connected to, or derived from, the FL networ - Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes . + + + + + + + + + + + + + Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes . ceriv 2021-01-27T10:44:40Z zebrafish_anatomy @@ -106603,7 +106673,7 @@ this previously described vessel is connected to, or derived from, the FL networ - Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals thy are found in the ileum pre-weaning and later are replaced by mature enterocytes . + Enterocytes that possess a large supranuclear vacuolar system that preferentially internalize dietary protein via receptor-mediated and fluid-phase endocytosis for intracellular digestion and trans-cellular transport. In zebrafish these cells are located in the posterior region of the mid intestine throughout life. In mammals they are found in the ileum pre-weaning and later are replaced by mature enterocytes . GOC:cvs ORCID:0000-0002-1009-339X ORCID:0000-0002-2244-7917 @@ -106612,6 +106682,38 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + + + + + + + + + + + + Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance. + ceriv + 2021-03-25T15:52:05Z + zebrafish_anatomy + ZFA:0005943 + perivitelline fluid + + + + + Extraembryonic fluid that fills the space between the embryo and the chorion. Provides mechanical cushion, defense from pathogens and helps maintain osmotic balance. + ZFIN:ZDB-PUB-200910-2 + + + + @@ -106654,6 +106756,521 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + + + + + + + + + + + + Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus. + 2021-07-09T09:06:25Z + red-sensitive cone cell + zebrafish_anatomy + unequal double cone cell + ZFA:0005945 + + long double cone cell + + + + + Retinal cone cell with a long outer segment that form pairs with the short double cone cell as part of the retinal cone mosaic pattern. The long double cone cell is positioned immediately adjacent to the long single cone cell and is sensitive to red light. The double cone cells have membrane projections at the level of the lobed nucleus. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + red-sensitive cone cell + ZFIN:ZDB-PUB-990520-1 + + + + + unequal double cone cell + ZFIN:ZDB-PUB-961014-677 + + + + + + + + + + + + + + + + + + + + + Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus. + ceriv + 2021-07-09T10:53:10Z + green-sensitive cone + zebrafish_anatomy + unequal double cone cell + ZFA:0005946 + + short double cone cell + + + + + Retinal cone cell with a shorter outer segment that form pairs with the long double cone cell as part of the retinal cone mosaic pattern. The short double cone cell is positioned immediately adjacent to the short single cone cell and is sensitive to green light. The double cone cells have membrane projections at the level of the lobed nucleus. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + green-sensitive cone + ZFIN:ZDB-PUB-990520-1 + + + + + unequal double cone cell + ZFIN:ZDB-PUB-961014-677 + + + + + + + + + + + + + + + + + + + + + Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells. + ceriv + 2021-07-09T11:01:04Z + blue-sensitive cone cell + zebrafish_anatomy + ZFA:0005947 + + long single cone cell + + + + + Retinal cone cell with a long outer segment. The long single cone cells are sensitive to blue light and are flanked by the long double cone cells. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + blue-sensitive cone cell + ZFIN:ZDB-PUB-990520-1 + + + + + + + + + + + + + + + + + + + + + Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs. + ceriv + 2021-07-09T11:10:25Z + UV-sensitive cone + ultraviolet-sensitive cone + zebrafish_anatomy + ZFA:0005948 + + short single cone cell + + + + + Retinal cone cell with the shortest outer segment that is located below the outer segments of the adjacent double cone cells. The short single cone cell is sensitive to UV light and has pronounced endoplasmic reticulum in electron micrographs. + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-961014-677 + ZFIN:ZDB-PUB-990520-1 + goc:cvs + + + + + UV-sensitive cone + ZFIN:ZDB-PUB-990520-1 + + + + + + + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the heart. + 2021-08-13T11:47:35Z + zebrafish_anatomy + ZFA:0005949 + heart lymph vessel + + + + + Lymph vessel located in the heart. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition. + ceriv + 2021-08-13T11:53:55Z + outflow tract lymph vessel + zebrafish_anatomy + ZFA:0005950 + bulbus arteriosus lymph vessel + + + + + Lymph vessel located in the bulbus arteriosus (outflow tract). These vessels develop from the facial lymphatic vessels and their appearance correlates with the larval to juvenile transition. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + + + + + + + Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels. + ceriv + 2021-08-13T11:58:24Z + zebrafish_anatomy + ZFA:0005951 + cardiac ventricle lymph vessel + + + + + Lymph vessel located in the cardiac ventricle. The ventricular lymph vessels develop from the bulbus arteriosus lymph vessels and sprout in close proximity to the ventricular blood vessels. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + Lymphatic system of the heart. + ceriv + 2021-08-13T12:23:44Z + zebrafish_anatomy + ZFA:0005952 + heart lymphatic system + + + + + Lymphatic system of the heart. + GOC:CVS + ORCID:0000-0002-2244-7917 + + + + + + + + + + + + + + + + + + + + + Capillary plexus that is located in the heart. + ceriv + 2021-08-13T12:26:17Z + zebrafish_anatomy + ZFA:0005953 + coronary capillary plexus + + + + + Capillary plexus that is located in the heart. + GOC:cvs + ORCID:0000-0002-2244-7917 + + + + + + + + + + + + + + + + + + + + + + + + + + + Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network. + ceriv + 2021-08-13T12:30:04Z + isolated lymph endothelial cells + zebrafish_anatomy + ZFA:0005954 + cardiac lymphatic endothelial cluster + + + + + Group of lymphatic cells in the heart that form independently of sprouting lymphangiogenesis. These cells appear as single cells that may expand into isolated lymph vessels as development progresses with no connection to the coronary capillary plexus or the lymphatic network. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage. + ceriv + 2021-08-13T12:53:02Z + zebrafish_anatomy + ZFA:0005955 + lymphatic endothelial cluster + + + + + Group of lymphatic endothelial cells that is separate from the lymphatic vasculature. These clusters may serve as repositories for lymphatic progenitors in case of tissue damage. + GOC:cvs + ORCID:0000-0002-2244-7917 + ZFIN:ZDB-PUB-191110-11 + + + + + + + + + + + + + + + + + + + + + A stem cell that can give rise to cell types of the germ-line. + ceriv + 2021-08-13T13:44:39Z + CL:0000014 + zebrafish_anatomy + ZFA:0005956 + + germline stem cell + + + + + A stem cell that can give rise to cell types of the germ-line. + ORCID:0000-0002-4142-7153 + + + + + + + + + + + + + + + + + + + + + A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. + ceriv + 2021-08-13T13:47:16Z + CL:0000034 + zebrafish_anatomy + ZFA:0005957 + + stem cell + + + + + A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells. + GOC:tfm + + + + @@ -110281,6 +110898,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory neural crest cells zebrafish_anatomy ZFA:0007084 + premigratory neural crest cell @@ -110373,6 +110991,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory neural crest cells zebrafish_anatomy ZFA:0007086 + migratory neural crest cell @@ -110487,6 +111106,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0002321 zebrafish_anatomy ZFA:0007089 + embryonic cell @@ -110527,6 +111147,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory cranial neural crest cells zebrafish_anatomy ZFA:0007090 + premigratory cranial neural crest cell @@ -110580,6 +111201,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory cranial neural crest cells zebrafish_anatomy ZFA:0007091 + migratory cranial neural crest cell @@ -110701,6 +111323,7 @@ this previously described vessel is connected to, or derived from, the FL networ premigratory trunk neural crest cells zebrafish_anatomy ZFA:0007094 + premigratory trunk neural crest cell @@ -110754,6 +111377,7 @@ this previously described vessel is connected to, or derived from, the FL networ migratory trunk neural crest cells zebrafish_anatomy ZFA:0007095 + migratory trunk neural crest cell @@ -111607,6 +112231,7 @@ this previously described vessel is connected to, or derived from, the FL networ CSF-cNs zebrafish_anatomy ZFA:0007120 + cerebrospinal fluid contacting neuron @@ -111657,6 +112282,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy KA 2 ZFA:0007121 + ventral cerebrospinal fluid contacting neuron @@ -111706,6 +112332,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_anatomy <new synonym> ZFA:0007122 + epidermal stem cell @@ -111746,6 +112373,7 @@ this previously described vessel is connected to, or derived from, the FL networ ionocyte progenitor cells zebrafish_anatomy ZFA:0007123 + ionocyte progenitor cell @@ -111793,6 +112421,7 @@ this previously described vessel is connected to, or derived from, the FL networ keratinocyte progenitor cells zebrafish_anatomy ZFA:0007124 + keratinocyte progenitor cell @@ -123872,7 +124501,7 @@ this previously described vessel is connected to, or derived from, the FL networ - + @@ -123899,7 +124528,7 @@ this previously described vessel is connected to, or derived from, the FL networ A stem cell that can give rise to cell types of the body other than those of the germ-line. - GO:CJM + GO:cjm @@ -127463,6 +128092,7 @@ this previously described vessel is connected to, or derived from, the FL networ CL:0011004 zebrafish_anatomy ZFA:0009401 + lens fiber cell @@ -127575,11 +128205,12 @@ this previously described vessel is connected to, or derived from, the FL networ Endothelial cells that surround the heart valve extracellular matrix. ceriv 2020-12-08T09:48:24Z + heart valve endocardial cell zebrafish_anatomy VEC ZFA:0009404 - heart valve endothelial cells + heart valve endothelial cell @@ -127589,6 +128220,12 @@ this previously described vessel is connected to, or derived from, the FL networ ORCID:0000-0002-2244-7917 ZFIN:ZDB-PUB-191202-2 + + + + heart valve endocardial cell + ZFIN:ZDB-PUB-200221-32 + @@ -127616,7 +128253,7 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2430 zebrafish_stages ZFS:0000000 - Unknown + unknown @@ -127629,7 +128266,7 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2431 zebrafish_stages ZFS:0000001 - Zygote:1-cell + zygote:1-cell @@ -127638,11 +128275,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-15 ZFIN:ZDB-TERM-100331-2432 zebrafish_stages ZFS:0000002 - Cleavage:2-cell + cleavage:2-cell @@ -127651,11 +128294,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-11 ZFIN:ZDB-TERM-100331-2433 zebrafish_stages ZFS:0000003 - Cleavage:4-cell + cleavage:4-cell @@ -127664,11 +128313,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-33 ZFIN:ZDB-TERM-100331-2434 zebrafish_stages ZFS:0000004 - Cleavage:8-cell + cleavage:8-cell @@ -127677,11 +128332,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-20 ZFIN:ZDB-TERM-100331-2435 zebrafish_stages ZFS:0000005 - Cleavage:16-cell + cleavage:16-cell @@ -127690,11 +128351,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-25 ZFIN:ZDB-TERM-100331-2436 zebrafish_stages ZFS:0000006 - Cleavage:32-cell + cleavage:32-cell @@ -127703,11 +128370,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-28 ZFIN:ZDB-TERM-100331-2437 zebrafish_stages ZFS:0000007 - Cleavage:64-cell + cleavage:64-cell @@ -127716,11 +128389,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-7 ZFIN:ZDB-TERM-100331-2438 zebrafish_stages ZFS:0000008 - Blastula:128-cell + blastula:128-cell @@ -127729,11 +128408,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-1 ZFIN:ZDB-TERM-100331-2439 zebrafish_stages ZFS:0000009 - Blastula:256-cell + blastula:256-cell @@ -127742,11 +128427,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-14 ZFIN:ZDB-TERM-100331-2440 zebrafish_stages ZFS:0000010 - Blastula:512-cell + blastula:512-cell @@ -127755,11 +128446,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-22 ZFIN:ZDB-TERM-100331-2441 zebrafish_stages ZFS:0000011 - Blastula:1k-cell + blastula:1k-cell @@ -127768,11 +128465,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-27 ZFIN:ZDB-TERM-100331-2442 zebrafish_stages ZFS:0000012 - Blastula:High + blastula:high @@ -127781,11 +128484,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-24 ZFIN:ZDB-TERM-100331-2443 zebrafish_stages ZFS:0000013 - Blastula:Oblong + blastula:oblong @@ -127794,11 +128503,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-21 ZFIN:ZDB-TERM-100331-2444 zebrafish_stages ZFS:0000014 - Blastula:Sphere + blastula:sphere @@ -127807,11 +128522,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-19 ZFIN:ZDB-TERM-100331-2445 zebrafish_stages ZFS:0000015 - Blastula:Dome + blastula:dome @@ -127820,11 +128541,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-17 ZFIN:ZDB-TERM-100331-2446 zebrafish_stages ZFS:0000016 - Blastula:30%-epiboly + blastula:30%-epiboly @@ -127833,11 +128560,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-6 ZFIN:ZDB-TERM-100331-2447 zebrafish_stages ZFS:0000017 - Gastrula:50%-epiboly + gastrula:50%-epiboly @@ -127846,11 +128579,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-3 ZFIN:ZDB-TERM-100331-2448 zebrafish_stages ZFS:0000018 - Gastrula:Germ-ring + gastrula:germ-ring @@ -127859,11 +128598,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-2 ZFIN:ZDB-TERM-100331-2449 zebrafish_stages ZFS:0000019 - Gastrula:Shield + gastrula:shield @@ -127872,11 +128617,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-18 ZFIN:ZDB-TERM-100331-2450 zebrafish_stages ZFS:0000020 - Gastrula:75%-epiboly + gastrula:75%-epiboly @@ -127885,11 +128636,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-29 ZFIN:ZDB-TERM-100331-2451 zebrafish_stages ZFS:0000021 - Gastrula:90%-epiboly + gastrula:90%-epiboly @@ -127898,11 +128655,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-12 ZFIN:ZDB-TERM-100331-2452 zebrafish_stages ZFS:0000022 - Gastrula:Bud + gastrula:bud @@ -127911,11 +128674,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-23 ZFIN:ZDB-TERM-100331-2453 zebrafish_stages ZFS:0000023 - Segmentation:1-4 somites + segmentation:1-4 somites @@ -127924,11 +128693,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-5 ZFIN:ZDB-TERM-100331-2454 zebrafish_stages ZFS:0000024 - Segmentation:5-9 somites + segmentation:5-9 somites @@ -127937,11 +128712,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-020626-1 ZFIN:ZDB-TERM-100331-2455 zebrafish_stages ZFS:0000025 - Segmentation:10-13 somites + segmentation:10-13 somites @@ -127950,11 +128731,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-30 ZFIN:ZDB-TERM-100331-2456 zebrafish_stages ZFS:0000026 - Segmentation:14-19 somites + segmentation:14-19 somites @@ -127963,11 +128750,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-16 ZFIN:ZDB-TERM-100331-2457 zebrafish_stages ZFS:0000027 - Segmentation:20-25 somites + segmentation:20-25 somites @@ -127976,11 +128769,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-34 ZFIN:ZDB-TERM-100331-2458 zebrafish_stages ZFS:0000028 - Segmentation:26+ somites + segmentation:26+ somites @@ -127989,11 +128788,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-10 ZFIN:ZDB-TERM-100331-2439 zebrafish_stages ZFS:0000029 - Pharyngula:Prim-5 + pharyngula:prim-5 @@ -128002,11 +128807,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-32 ZFIN:ZDB-TERM-100331-2460 zebrafish_stages ZFS:0000030 - Pharyngula:Prim-15 + pharyngula:prim-15 @@ -128015,11 +128826,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-13 ZFIN:ZDB-TERM-100331-2461 zebrafish_stages ZFS:0000031 - Pharyngula:Prim-25 + pharyngula:prim-25 @@ -128028,11 +128845,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-31 ZFIN:ZDB-TERM-100331-2462 zebrafish_stages ZFS:0000032 - Pharyngula:High-pec + pharyngula:high-pec @@ -128041,11 +128864,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-9 ZFIN:ZDB-TERM-100331-2463 zebrafish_stages ZFS:0000033 - Hatching:Long-pec + hatching:long-pec @@ -128054,11 +128883,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-26 ZFIN:ZDB-TERM-100331-2464 zebrafish_stages ZFS:0000034 - Hatching:Pec-fin + hatching:pec-fin @@ -128067,11 +128902,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-8 ZFIN:ZDB-TERM-100331-2465 zebrafish_stages ZFS:0000035 - Larval:Protruding-mouth + larval:protruding-mouth @@ -128080,11 +128921,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-35 ZFIN:ZDB-TERM-100331-2466 zebrafish_stages ZFS:0000036 - Larval:Day 4 + larval:day 4 @@ -128093,11 +128940,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-36 ZFIN:ZDB-TERM-100331-2467 zebrafish_stages ZFS:0000037 - Larval:Day 5 + larval:day 5 @@ -128106,11 +128959,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-37 ZFIN:ZDB-TERM-100331-2468 zebrafish_stages ZFS:0000038 - Larval:Day 6 + larval:day 6 @@ -128119,11 +128978,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-47 ZFIN:ZDB-TERM-100331-2469 zebrafish_stages ZFS:0000039 - Larval:Days 7-13 + larval:days 7-13 @@ -128132,11 +128997,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-48 ZFIN:ZDB-TERM-100331-2470 zebrafish_stages ZFS:0000040 - Larval:Days 14-20 + larval:days 14-20 @@ -128145,11 +129016,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-49 ZFIN:ZDB-TERM-100331-2471 zebrafish_stages ZFS:0000041 - Larval:Days 21-29 + larval:days 21-29 @@ -128158,11 +129035,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-51 ZFIN:ZDB-TERM-100331-2472 zebrafish_stages ZFS:0000042 - Juvenile:Days 30-44 + juvenile:days 30-44 @@ -128171,11 +129054,17 @@ this previously described vessel is connected to, or derived from, the FL networ + + + + + + ZFIN:ZDB-STAGE-010723-52 ZFIN:ZDB-TERM-100331-2473 zebrafish_stages ZFS:0000043 - Juvenile:Days 45-89 + juvenile:days 45-89 @@ -128188,7 +129077,139 @@ this previously described vessel is connected to, or derived from, the FL networ ZFIN:ZDB-TERM-100331-2474 zebrafish_stages ZFS:0000044 - Adult + adult + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000045 + blastula + + + + + + + + + zebrafish_stages + ZFS:0000046 + cleavage + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000047 + gastrula + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000048 + larva + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000049 + segmentation + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000050 + pharyngula + + + + + + + + + + + + + + + zebrafish_stages + ZFS:0000051 + juvenile + + + + + + + + + + + + + + + yvonne + 2014-11-05T08:33:09Z + zebrafish_stages + ZFS:0007000 + hatching @@ -128198,7 +129219,7 @@ this previously described vessel is connected to, or derived from, the FL networ zebrafish_stages ZFS:0100000 - Stages + zebrafish stage