{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":472920138,"defaultBranch":"main","name":"pollen","ownerLogin":"cucapra","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-03-22T20:03:58.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/22773112?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1726149712.0","currentOid":""},"activityList":{"items":[{"before":"900154476332a4626b5546133c2eb214f3774ad0","after":null,"ref":"refs/heads/extract","pushedAt":"2024-09-12T14:01:52.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"}},{"before":"ccf19116e2e0f86b4ac4f00e91a19967bfa19128","after":"7e9f6207ea9f4321c3664d34a9eca81c9c9c07ea","ref":"refs/heads/main","pushedAt":"2024-09-12T14:01:49.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"Extract Functioning (#190)","shortMessageHtmlLink":"Extract Functioning (#190)"}},{"before":"a78c618b397cc00c1a720321186e1eaf659e1274","after":"900154476332a4626b5546133c2eb214f3774ad0","ref":"refs/heads/extract","pushedAt":"2024-09-12T13:57:20.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"Merge branch 'main' into extract","shortMessageHtmlLink":"Merge branch 'main' into extract"}},{"before":"f5602e316145f3127f75afc11e65c6da829b3759","after":null,"ref":"refs/heads/chop","pushedAt":"2024-09-12T13:50:43.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"}},{"before":"eace30f7b11563c648c175d1078ceb37f7f01862","after":"ccf19116e2e0f86b4ac4f00e91a19967bfa19128","ref":"refs/heads/main","pushedAt":"2024-09-12T13:50:40.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"Implement Chop (#188)","shortMessageHtmlLink":"Implement Chop (#188)"}},{"before":"063fa35cf56b80a067f7cd3828e25690a26f4e58","after":"f5602e316145f3127f75afc11e65c6da829b3759","ref":"refs/heads/chop","pushedAt":"2024-09-12T13:50:23.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"Merge branch 'main' into chop","shortMessageHtmlLink":"Merge branch 'main' into chop"}},{"before":"c391fa710504c86322e7435c0047079ed8fe1c59","after":"063fa35cf56b80a067f7cd3828e25690a26f4e58","ref":"refs/heads/chop","pushedAt":"2024-09-12T13:46:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"whitespace","shortMessageHtmlLink":"whitespace"}},{"before":null,"after":"908357bfe0b7e59b4e27c783857e41f6d16f8e15","ref":"refs/heads/modern-uv","pushedAt":"2024-07-28T19:02:50.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"sampsyo","name":"Adrian Sampson","path":"/sampsyo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/188033?s=80&v=4"},"commit":{"message":"Try adding FlatGFA??","shortMessageHtmlLink":"Try adding FlatGFA??"}},{"before":"9d1803b68cfcf152af54f9562bac5a7917cefb4b","after":"a78c618b397cc00c1a720321186e1eaf659e1274","ref":"refs/heads/extract","pushedAt":"2024-07-12T00:04:24.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"cleanup","shortMessageHtmlLink":"cleanup"}},{"before":"ba6f19240288f883df580fc47e8154e68043e237","after":"9d1803b68cfcf152af54f9562bac5a7917cefb4b","ref":"refs/heads/extract","pushedAt":"2024-07-11T23:38:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"full normalize mygfa output","shortMessageHtmlLink":"full normalize mygfa output"}},{"before":null,"after":"ba6f19240288f883df580fc47e8154e68043e237","ref":"refs/heads/extract","pushedAt":"2024-07-11T23:33:53.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"extract for radius (-n) 1, actually normalize mygfa output graphs","shortMessageHtmlLink":"extract for radius (-n) 1, actually normalize mygfa output graphs"}},{"before":"0e19844b41020842406a9cf7fd13198dbafa1f49","after":"c391fa710504c86322e7435c0047079ed8fe1c59","ref":"refs/heads/chop","pushedAt":"2024-07-11T00:51:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"oops","shortMessageHtmlLink":"oops"}},{"before":"71a7e53eaa5205bdec59b22984589a47f11a3a07","after":"0e19844b41020842406a9cf7fd13198dbafa1f49","ref":"refs/heads/chop","pushedAt":"2024-07-11T00:26:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"represent the ranges of newly chopped segments as spans; abstracting away spans and ids would be nice, but if we're using ids, we might as well use spans","shortMessageHtmlLink":"represent the ranges of newly chopped segments as spans; abstracting …"}},{"before":"a9b00326576aa2fbeae7562e88399a8c76ea6bf9","after":"71a7e53eaa5205bdec59b22984589a47f11a3a07","ref":"refs/heads/chop","pushedAt":"2024-07-10T21:09:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"simplifications, code comments, and better benchmarking","shortMessageHtmlLink":"simplifications, code comments, and better benchmarking"}},{"before":"7d2cefc51229a7c6affc98e5000b660a971296a7","after":"a9b00326576aa2fbeae7562e88399a8c76ea6bf9","ref":"refs/heads/chop","pushedAt":"2024-07-09T15:36:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"actually run tests, don't just print turnt commands","shortMessageHtmlLink":"actually run tests, don't just print turnt commands"}},{"before":"84cff3193539a77f318685056cc7de10095b8c4d","after":null,"ref":"refs/heads/docker-odgi-interactive","pushedAt":"2024-07-09T15:34:37.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"sampsyo","name":"Adrian Sampson","path":"/sampsyo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/188033?s=80&v=4"}},{"before":"3fdbf7376c076fafdf8b4b5d477f808d1d7279e9","after":"eace30f7b11563c648c175d1078ceb37f7f01862","ref":"refs/heads/main","pushedAt":"2024-07-09T15:34:34.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"sampsyo","name":"Adrian Sampson","path":"/sampsyo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/188033?s=80&v=4"},"commit":{"message":"Try making Dockerized odgi read from stdin (#189)","shortMessageHtmlLink":"Try making Dockerized odgi read from stdin (#189)"}},{"before":null,"after":"84cff3193539a77f318685056cc7de10095b8c4d","ref":"refs/heads/docker-odgi-interactive","pushedAt":"2024-07-09T15:31:35.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"sampsyo","name":"Adrian Sampson","path":"/sampsyo","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/188033?s=80&v=4"},"commit":{"message":"Try making Dockerized odgi read from stdin\n\nAdd `-i` to the Docker command line. Maybe this will work?","shortMessageHtmlLink":"Try making Dockerized odgi read from stdin"}},{"before":"3f50bcb54daa1ebfe4d07c9e9c568d1f198ddd3f","after":"7d2cefc51229a7c6affc98e5000b660a971296a7","ref":"refs/heads/chop","pushedAt":"2024-07-09T14:33:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"use latest version of odgi","shortMessageHtmlLink":"use latest version of odgi"}},{"before":"62de9fcb7a579fd5f62224d1485818870c2772cb","after":"3f50bcb54daa1ebfe4d07c9e9c568d1f198ddd3f","ref":"refs/heads/chop","pushedAt":"2024-07-09T14:29:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"turnt prints stuff","shortMessageHtmlLink":"turnt prints stuff"}},{"before":"ec66a32f6fd866fc82291ad9fc4b6f0ed3ee8e2c","after":"62de9fcb7a579fd5f62224d1485818870c2772cb","ref":"refs/heads/chop","pushedAt":"2024-07-08T23:15:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"tests that rely on odgi use odgi files, avoids unnecessary conversions","shortMessageHtmlLink":"tests that rely on odgi use odgi files, avoids unnecessary conversions"}},{"before":"7c9cd1b26c558ce985418bbfecc83bc2166ee41b","after":"ec66a32f6fd866fc82291ad9fc4b6f0ed3ee8e2c","ref":"refs/heads/chop","pushedAt":"2024-07-08T23:07:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"flatgfa tests display turnt diffs","shortMessageHtmlLink":"flatgfa tests display turnt diffs"}},{"before":"f58b6bd7f2ff594b502b7371ab80d21445d542ef","after":"7c9cd1b26c558ce985418bbfecc83bc2166ee41b","ref":"refs/heads/chop","pushedAt":"2024-07-08T23:03:49.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"Get changes to workflow file","shortMessageHtmlLink":"Get changes to workflow file"}},{"before":"551d2861f7ab7163137aeb08c8017facfaec7715","after":"f58b6bd7f2ff594b502b7371ab80d21445d542ef","ref":"refs/heads/chop","pushedAt":"2024-07-08T22:45:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"flatgfa now requires odgi and slow_odgi","shortMessageHtmlLink":"flatgfa now requires odgi and slow_odgi"}},{"before":"06099937e989ce65414a1c049287c7412fb0e971","after":"551d2861f7ab7163137aeb08c8017facfaec7715","ref":"refs/heads/chop","pushedAt":"2024-07-08T22:19:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"turnt error messages are verbose","shortMessageHtmlLink":"turnt error messages are verbose"}},{"before":"9ff0d6f82896ec3e669737eb526fc5ed923988d5","after":"06099937e989ce65414a1c049287c7412fb0e971","ref":"refs/heads/chop","pushedAt":"2024-07-08T20:22:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"clippy","shortMessageHtmlLink":"clippy"}},{"before":"1cff638783c7e7d8096b13f4be31807789b2eaac","after":"9ff0d6f82896ec3e669737eb526fc5ed923988d5","ref":"refs/heads/chop","pushedAt":"2024-07-08T20:07:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"re-implement chop treating links as bidirectional, tests pass","shortMessageHtmlLink":"re-implement chop treating links as bidirectional, tests pass"}},{"before":"2cfa2fc41f995ed956cf3a4c22325c442db8cbc7","after":"1cff638783c7e7d8096b13f4be31807789b2eaac","ref":"refs/heads/chop","pushedAt":"2024-07-06T16:04:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"chop now computes new links, but is buggy (as is odgi), testing framework","shortMessageHtmlLink":"chop now computes new links, but is buggy (as is odgi), testing frame…"}},{"before":"633ab10373c45f5ff535b0c478c2cb7d5cb66492","after":"2cfa2fc41f995ed956cf3a4c22325c442db8cbc7","ref":"refs/heads/chop","pushedAt":"2024-06-18T20:14:05.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"add benchmarking for chop, allow shell commands in config.toml (so we can pipeline)","shortMessageHtmlLink":"add benchmarking for chop, allow shell commands in config.toml (so we…"}},{"before":"74726d13b919a906d816b3de6c00d9c4bad69928","after":"633ab10373c45f5ff535b0c478c2cb7d5cb66492","ref":"refs/heads/chop","pushedAt":"2024-06-17T21:00:04.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"susan-garry","name":"Susan Garry","path":"/susan-garry","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/24484834?s=80&v=4"},"commit":{"message":"test fgfa depth","shortMessageHtmlLink":"test fgfa depth"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0xMlQxNDowMTo1Mi4wMDAwMDBazwAAAAS0doHe","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0xMlQxNDowMTo1Mi4wMDAwMDBazwAAAAS0doHe","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNi0xN1QyMTowMDowNC4wMDAwMDBazwAAAARnyd-e"}},"title":"Activity · cucapra/pollen"}