forked from MathiasHarrer/Doing-Meta-Analysis-in-R
-
Notifications
You must be signed in to change notification settings - Fork 0
/
book.bib
1454 lines (1304 loc) · 42.6 KB
/
book.bib
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
@Book{xie2015,
title = {Dynamic Documents with {R} and knitr},
author = {Yihui Xie},
publisher = {Chapman and Hall/CRC},
address = {Boca Raton, Florida},
year = {2015},
edition = {2nd},
note = {ISBN 978-1498716963},
url = {http://yihui.name/knitr/},
}
@book{xie2018r,
title={R markdown: The definitive guide},
author={Xie, Yihui and Allaire, Joseph J and Grolemund, Garrett},
year={2018},
publisher={Chapman and Hall/CRC}
}
@book{schwarzer2015meta,
title={Meta-analysis with R},
author={Schwarzer, Guido and Carpenter, James R and R{\"u}cker, Gerta},
year={2015},
publisher={Springer}
}
@book{grolemund2014hands,
title={Hands-On Programming with R: Write Your Own Functions and Simulations},
author={Grolemund, Garrett},
year={2014},
publisher={O'Reilly}
}
@book{borenstein2011,
title={Introduction to meta-analysis},
author={Borenstein, Michael and Hedges, Larry V and Higgins, Julian PT and Rothstein, Hannah R},
year={2011},
publisher={John Wiley \& Sons}
}
@article{fleiss1993review,
title={Review papers: The statistical basis of meta-analysis},
author={Fleiss, JL},
journal={Statistical methods in medical research},
volume={2},
number={2},
pages={121--145},
year={1993},
publisher={Sage Publications Sage CA: Thousand Oaks, CA}
}
@article{schwarzer2007meta,
title={meta: An R package for meta-analysis},
author={Schwarzer, Guido},
journal={R news},
volume={7},
number={3},
pages={40--45},
year={2007}
}
@article{cuijpers2016meta,
title={Meta-analyses in mental health research. A practical guide},
author={Cuijpers, Pim},
journal={Amsterdam, the Netherlands: Pim Cuijpers Uitgeverij},
year={2016}
}
@article{furukawa2003,
title={Low dosage tricyclic antidepressants for depression},
author={Furukawa, Toshi A and McGuire, Hugh and Barbui, Corrado},
journal={Cochrane database of systematic reviews},
number={3},
year={2003},
publisher={John Wiley \& Sons, Ltd}
}
@article{poole1999,
title={Random-effects meta-analyses are not always conservative},
author={Poole, Charles and Greenland, Sander},
journal={American Journal of Epidemiology},
volume={150},
number={5},
pages={469--475},
year={1999},
publisher={Oxford University Press}
}
@article{veroniki2016methods,
title={Methods to estimate the between-study variance and its uncertainty in meta-analysis},
author={Veroniki, Areti Angeliki and Jackson, Dan and Viechtbauer, Wolfgang and Bender, Ralf and Bowden, Jack and Knapp, Guido and Kuss, Oliver and Higgins, Julian PT and Langan, Dean and Salanti, Georgia},
journal={Research synthesis methods},
volume={7},
number={1},
pages={55--79},
year={2016},
publisher={Wiley Online Library}
}
@article{dersimonian1986meta,
title={Meta-analysis in clinical trials},
author={DerSimonian, Rebecca and Laird, Nan},
journal={Controlled clinical trials},
volume={7},
number={3},
pages={177--188},
year={1986},
publisher={Elsevier}
}
@article{sidik2007comparison,
title={A comparison of heterogeneity variance estimators in combining results of studies},
author={Sidik, Kurex and Jonkman, Jeffrey N},
journal={Statistics in medicine},
volume={26},
number={9},
pages={1964--1981},
year={2007},
publisher={Wiley Online Library}
}
@article{viechtbauer2005bias,
title={Bias and efficiency of meta-analytic variance estimators in the random-effects model},
author={Viechtbauer, Wolfgang},
journal={Journal of Educational and Behavioral Statistics},
volume={30},
number={3},
pages={261--293},
year={2005},
publisher={Sage Publications Sage CA: Los Angeles, CA}
}
@article{inthout2014hartung,
title={The Hartung-Knapp-Sidik-Jonkman method for random effects meta-analysis is straightforward and considerably outperforms the standard DerSimonian-Laird method},
author={IntHout, Joanna and Ioannidis, John PA and Borm, George F},
journal={BMC medical research methodology},
volume={14},
number={1},
pages={25},
year={2014},
publisher={BioMed Central}
}
@article{hartung1999alternative,
title={An alternative method for meta-analysis},
author={Hartung, Joachim},
journal={Biometrical Journal: Journal of Mathematical Methods in Biosciences},
volume={41},
number={8},
pages={901--916},
year={1999},
publisher={Wiley Online Library}
}
@article{hartung2001refined,
title={A refined method for the meta-analysis of controlled clinical trials with binary outcome},
author={Hartung, Joachim and Knapp, Guido},
journal={Statistics in medicine},
volume={20},
number={24},
pages={3875--3889},
year={2001},
publisher={Wiley Online Library}
}
@article{hartung2001tests,
title={On tests of the overall treatment effect in meta-analysis with normally distributed responses},
author={Hartung, Joachim and Knapp, Guido},
journal={Statistics in medicine},
volume={20},
number={12},
pages={1771--1782},
year={2001},
publisher={Wiley Online Library}
}
@article{follmann1999valid,
title={Valid inference in random effects meta-analysis},
author={Follmann, Dean A and Proschan, Michael A},
journal={Biometrics},
volume={55},
number={3},
pages={732--737},
year={1999},
publisher={Wiley Online Library}
}
@article{makambi2004effect,
title={The effect of the heterogeneity variance estimator on some tests of treatment efficacy},
author={Makambi, Kepher H},
journal={Journal of biopharmaceutical statistics},
volume={14},
number={2},
pages={439--449},
year={2004},
publisher={Taylor \& Francis}
}
@article{wiksten2016hartung,
title={Hartung--Knapp method is not always conservative compared with fixed-effect meta-analysis},
author={Wiksten, Anna and R{\"u}cker, Gerta and Schwarzer, Guido},
journal={Statistics in medicine},
volume={35},
number={15},
pages={2503--2515},
year={2016},
publisher={Wiley Online Library}
}
@article{jackson2017hartung,
title={The Hartung-Knapp modification for random-effects meta-analysis: A useful refinement but are there any residual concerns?},
author={Jackson, Dan and Law, Martin and R{\"u}cker, Gerta and Schwarzer, Guido},
journal={Statistics in medicine},
volume={36},
number={25},
pages={3923--3934},
year={2017},
publisher={Wiley Online Library}
}
@article{gart1967bias,
title={On the bias of various estimators of the logit and its variance with application to quantal bioassay},
author={Gart, John J and Zweifel, James R},
journal={Biometrika},
pages={181--187},
year={1967},
publisher={JSTOR}
}
@article{j2004add,
title={What to add to nothing? Use and avoidance of continuity corrections in meta-analysis of sparse data},
author={J. Sweeting, Michael and J. Sutton, Alexander and C. Lambert, Paul},
journal={Statistics in medicine},
volume={23},
number={9},
pages={1351--1375},
year={2004},
publisher={Wiley Online Library}
}
@article{rucker2008undue,
title={Undue reliance on I 2 in assessing heterogeneity may mislead},
author={R{\"u}cker, Gerta and Schwarzer, Guido and Carpenter, James R and Schumacher, Martin},
journal={BMC medical research methodology},
volume={8},
number={1},
pages={79},
year={2008},
publisher={BioMed Central}
}
@article{higgins2002quantifying,
title={Quantifying heterogeneity in a meta-analysis},
author={Higgins, Julian PT and Thompson, Simon G},
journal={Statistics in medicine},
volume={21},
number={11},
pages={1539--1558},
year={2002},
publisher={Wiley Online Library}
}
@article{higgins2003measuring,
title={Measuring inconsistency in meta-analyses},
author={Higgins, Julian PT and Thompson, Simon G and Deeks, Jonathan J and Altman, Douglas G},
journal={BMJ: British Medical Journal},
volume={327},
number={7414},
pages={557},
year={2003},
publisher={BMJ Publishing Group}
}
@article{borenstein2017basics,
title={Basics of meta-analysis: I2 is not an absolute measure of heterogeneity},
author={Borenstein, Michael and Higgins, Julian PT and Hedges, Larry V and Rothstein, Hannah R},
journal={Research synthesis methods},
volume={8},
number={1},
pages={5--18},
year={2017},
publisher={Wiley Online Library}
}
@article{inthout2016plea,
title={Plea for routinely presenting prediction intervals in meta-analysis},
author={IntHout, Joanna and Ioannidis, John PA and Rovers, Maroeska M and Goeman, Jelle J},
journal={BMJ open},
volume={6},
number={7},
pages={e010247},
year={2016},
publisher={British Medical Journal Publishing Group}
}
@article{cohen1988statistical,
title={Statistical power analysis for the behavioral sciences. 1988, Hillsdale, NJ: L},
author={Cohen, Jacob},
journal={Lawrence Earlbaum Associates},
volume={2},
year={1988}
}
@article{hedges1981distribution,
title={Distribution theory for Glass's estimator of effect size and related estimators},
author={Hedges, Larry V},
journal={journal of Educational Statistics},
volume={6},
number={2},
pages={107--128},
year={1981},
publisher={Sage Publications Sage CA: Thousand Oaks, CA}
}
@misc{hedges1985statistical,
title={Statistical models for meta-analysis},
author={Hedges, L and Olkin, Ingram},
year={1985},
publisher={New York: Academic Press}
}
@Manual{esc,
title = {Effect Size Computation for Meta Analysis},
author = {Daniel Lüdecke},
year = {2018},
note = {R package version 0.4.1},
url = {https://CRAN.R-project.org/package=esc},
}
@book{lipsey2001practical,
title={Practical meta-analysis.},
author={Lipsey, Mark W and Wilson, David B},
year={2001},
publisher={Sage Publications, Inc}
}
@article{cohen1992power,
title={A power primer.},
author={Cohen, Jacob},
journal={Psychological bulletin},
volume={112},
number={1},
pages={155},
year={1992},
publisher={American Psychological Association}
}
@article{rosnow1996computing,
title={Computing contrasts, effect sizes, and counternulls on other people's published data: General procedures for research consumers.},
author={Rosnow, Ralph L and Rosenthal, Robert},
journal={Psychological Methods},
volume={1},
number={4},
pages={331},
year={1996},
publisher={American Psychological Association}
}
@article{rosnow2000contrasts,
title={Contrasts and correlations in effect-size estimation},
author={Rosnow, Ralph L and Rosenthal, Robert and Rubin, Donald B},
journal={Psychological science},
volume={11},
number={6},
pages={446--453},
year={2000},
publisher={SAGE Publications Sage CA: Los Angeles, CA}
}
@article{thalheimer2002calculate,
title={How to calculate effect sizes from published research: A simplified methodology},
author={Thalheimer, Will and Cook, Samantha},
journal={Work-Learning Research},
volume={1},
year={2002}
}
@misc{rosenthal1984meta,
title={Meta-Analysis Procedure for Social Research},
author={Rosenthal, R},
year={1984},
publisher={Sage Publications}
}
@book{aaron1998equating,
title={Equating r-based and d-based effect size indices: problems with a commonly recommended formula},
author={Aaron, Bruce and Kromrey, Jeffrey D and Ferron, John},
year={1998},
publisher={ERIC Clearinghouse}
}
@article{viechtbauer2010outlier,
title={Outlier and influence diagnostics for meta-analysis},
author={Viechtbauer, Wolfgang and Cheung, Mike W-L},
journal={Research synthesis methods},
volume={1},
number={2},
pages={112--125},
year={2010},
publisher={Wiley Online Library}
}
@article{baujat2002graphical,
title={A graphical method for exploring heterogeneity in meta-analyses: application to a meta-analysis of 65 trials},
author={Baujat, Bertrand and Mah{\'e}, C{\'e}dric and Pignon, Jean-Pierre and Hill, Catherine},
journal={Statistics in medicine},
volume={21},
number={18},
pages={2641--2652},
year={2002},
publisher={Wiley Online Library}
}
@article{borenstein2013meta,
title={Meta-analysis and subgroups},
author={Borenstein, Michael and Higgins, Julian PT},
journal={Prevention Science},
volume={14},
number={2},
pages={134--143},
year={2013},
publisher={Springer}
}
@article{higgins2004controlling,
title={Controlling the risk of spurious findings from meta-regression},
author={Higgins, Julian PT and Thompson, Simon G},
journal={Statistics in medicine},
volume={23},
number={11},
pages={1663--1682},
year={2004},
publisher={Wiley Online Library}
}
@book{rothstein2006publication,
title={Publication bias in meta-analysis: Prevention, assessment and adjustments},
author={Rothstein, Hannah R and Sutton, Alexander J and Borenstein, Michael},
year={2006},
publisher={John Wiley \& Sons}
}
@article{nelson2018psychology,
title={Psychology's renaissance},
author={Nelson, Leif D and Simmons, Joseph and Simonsohn, Uri},
journal={Annual review of psychology},
volume={69},
year={2018}
}
@article{dickersin2005publication,
title={Publication bias: Recognizing the problem, understanding its origins and scope, and preventing harm},
author={Dickersin, Kay},
journal={Publication bias in meta-analysis: Prevention, assessment and adjustments},
pages={11--33},
year={2005},
publisher={Wiley Chichester, UK}
}
@article{simonsohn2014p,
title={P-curve: a key to the file-drawer.},
author={Simonsohn, Uri and Nelson, Leif D and Simmons, Joseph P},
journal={Journal of Experimental Psychology: General},
volume={143},
number={2},
pages={534},
year={2014},
publisher={American Psychological Association}
}
@article{simonsohn2015better,
title={Better P-curves: Making P-curve analysis more robust to errors, fraud, and ambitious P-hacking, a Reply to Ulrich and Miller (2015).},
author={Simonsohn, Uri and Simmons, Joseph P and Nelson, Leif D},
year={2015},
publisher={American Psychological Association}
}
@article{simonsohn2014pb,
title={p-curve and effect size: Correcting for publication bias using only significant results},
author={Simonsohn, Uri and Nelson, Leif D and Simmons, Joseph P},
journal={Perspectives on Psychological Science},
volume={9},
number={6},
pages={666--681},
year={2014},
publisher={Sage Publications Sage CA: Los Angeles, CA}
}
@article{harrer2019internet,
title={Internet Interventions for Mental Health in University Students: a systematic review and Meta-Analysis},
author={Harrer, Mathias and Adam, Sophia H and Baumeister, Harald and Karyotaki, Erini and Cuijper, Pim and Bruffaerts, Ronny and Auerbach, Randy P and Kessler, Ronald C and Berking, Matthias and Ebert, David D.},
journal={Journal of Methods in Psychiatric Research},
year={2019},
}
@article{simmons2011false,
title={False-positive psychology: Undisclosed flexibility in data collection and analysis allows presenting anything as significant},
author={Simmons, Joseph P and Nelson, Leif D and Simonsohn, Uri},
journal={Psychological science},
volume={22},
number={11},
pages={1359--1366},
year={2011},
publisher={Sage Publications Sage CA: Los Angeles, CA}
}
@article{peters2008contour,
title={Contour-enhanced meta-analysis funnel plots help distinguish publication bias from other causes of asymmetry},
author={Peters, Jaime L and Sutton, Alex J and Jones, David R and Abrams, Keith R and Rushton, Lesley},
journal={Journal of clinical epidemiology},
volume={61},
number={10},
pages={991--996},
year={2008},
publisher={Elsevier}
}
@article{egger1997bias,
title={Bias in meta-analysis detected by a simple, graphical test},
author={Egger, Matthias and Smith, George Davey and Schneider, Martin and Minder, Christoph},
journal={Bmj},
volume={315},
number={7109},
pages={629--634},
year={1997},
publisher={British Medical Journal Publishing Group}
}
@article{duval2000trim,
title={Trim and fill: a simple funnel-plot--based method of testing and adjusting for publication bias in meta-analysis},
author={Duval, Sue and Tweedie, Richard},
journal={Biometrics},
volume={56},
number={2},
pages={455--463},
year={2000},
publisher={Wiley Online Library}
}
@article{head2015extent,
title={The extent and consequences of p-hacking in science},
author={Head, Megan L and Holman, Luke and Lanfear, Rob and Kahn, Andrew T and Jennions, Michael D},
journal={PLoS biology},
volume={13},
number={3},
pages={e1002106},
year={2015},
publisher={Public Library of Science}
}
@article{del2013compute,
title={compute. es: Compute Effect Sizes. R package version 0.2-2},
author={Del Re, AC},
year={2013},
publisher={R-project}
}
@article{hong2011poibin,
title={poibin: the Poisson binomial distribution},
author={Hong, Y},
year={2011},
publisher={R package version}
}
@article{van2016conducting,
title={Conducting meta-analyses based on p values: Reservations and recommendations for applying p-uniform and p-curve},
author={van Aert, Robbie CM and Wicherts, Jelte M and van Assen, Marcel ALM},
journal={Perspectives on Psychological Science},
volume={11},
number={5},
pages={713--729},
year={2016},
publisher={Sage Publications Sage CA: Los Angeles, CA}
}
@article{cuijpers2014threshold,
title={What is the threshold for a clinically relevant effect? The case of major depressive disorders},
author={Cuijpers, Pim and Turner, Erick H and Koole, Sander L and Van Dijke, Annemiek and Smit, Filip},
journal={Depression and anxiety},
volume={31},
number={5},
pages={374--378},
year={2014},
publisher={Wiley Online Library}
}
@article{hoenig2001abuse,
title={The abuse of power: the pervasive fallacy of power calculations for data analysis},
author={Hoenig, John M and Heisey, Dennis M},
journal={The American Statistician},
volume={55},
number={1},
pages={19--24},
year={2001},
publisher={Taylor \& Francis}
}
@article{hedges2004power,
title={The power of statistical tests for moderators in meta-analysis.},
author={Hedges, Larry V and Pigott, Therese D},
journal={Psychological methods},
volume={9},
number={4},
pages={426},
year={2004},
publisher={American Psychological Association}
}
@article{labbe,
title={Meta-analysis in clinical research},
author={L'Abbé, Kristan A and Detsky, Allan S and O'Rourke, Keith},
journal={Annals of Internal Medicine},
volume={107},
number={2},
pages={224--233},
year={1987},
publisher={Am Coll Physicians}
}
@article{pastor2018multilevel,
title={On the multilevel nature of meta-analysis: a tutorial, comparison of software programs, and discussion of analytic choices},
author={Pastor, Dena A and Lazowski, Rory A},
journal={Multivariate behavioral research},
volume={53},
number={1},
pages={74--89},
year={2018},
publisher={Taylor \& Francis}
}
@article{cheung2014modeling,
title={Modeling dependent effect sizes with three-level meta-analyses: a structural equation modeling approach.},
author={Cheung, Mike W-L},
journal={Psychological Methods},
volume={19},
number={2},
pages={211},
year={2014},
publisher={American Psychological Association}
}
@article{assink2016fitting,
title={Fitting three-level meta-analytic models in R: A step-by-step tutorial},
author={Assink, Mark and Wibbelink, Carlijn JM},
journal={The Quantitative Methods for Psychology},
volume={12},
number={3},
pages={154--174},
year={2016}
}
@article{hedges2009statistical,
title={Statistical considerations},
author={Hedges, Larry V},
journal={The handbook of research synthesis and meta-analysis},
pages={38--47},
year={2009},
publisher={Russell Sage Foundation New York}
}
@article{lme4,
title = {Fitting Linear Mixed-Effects Models Using {lme4}},
author = {Douglas Bates and Martin M{\"a}chler and Ben Bolker and Steve Walker},
journal = {Journal of Statistical Software},
year = {2015},
volume = {67},
number = {1},
pages = {1--48},
doi = {10.18637/jss.v067.i01},
}
@article{higgins2004controlling,
title={Controlling the risk of spurious findings from meta-regression},
author={Higgins, Julian PT and Thompson, Simon G},
journal={Statistics in medicine},
volume={23},
number={11},
pages={1663--1682},
year={2004},
publisher={Wiley Online Library}
}
@article{iniesta2016machine,
title={Machine learning, statistical learning and the future of biological research in psychiatry},
author={Iniesta, R and Stahl, D and McGuffin, P},
journal={Psychological medicine},
volume={46},
number={12},
pages={2455--2465},
year={2016},
publisher={Cambridge University Press}
}
@article{gigerenzer2004mindless,
title={Mindless statistics},
author={Gigerenzer, Gerd},
journal={The Journal of Socio-Economics},
volume={33},
number={5},
pages={587--606},
year={2004},
publisher={Elsevier}
}
@book{gigerenzer2008rationality,
title={Rationality for mortals: How people cope with uncertainty},
author={Gigerenzer, Gerd},
year={2008},
publisher={Oxford University Press}
}
@article{higgins2002statistical,
title={Statistical heterogeneity in systematic reviews of clinical trials: a critical appraisal of guidelines and practice},
author={Higgins, Julian and Thompson, Simon and Deeks, Jonathan and Altman, Douglas},
journal={Journal of health services research \& policy},
volume={7},
number={1},
pages={51--61},
year={2002},
publisher={SAGE Publications Sage UK: London, England}
}
@article{berlin1992advantages,
title={Advantages and limitations of meta-analytic regressions of clinical trials data},
author={Berlin, Jesse A and Antman, Elliott M},
journal={Controlled Clinical Trials},
volume={13},
number={5},
pages={422},
year={1992},
publisher={Elsevier}
}
@article{mansfield1982detecting,
title={Detecting multicollinearity},
author={Mansfield, Edward R and Helms, Billy P},
journal={The American Statistician},
volume={36},
number={3a},
pages={158--160},
year={1982},
publisher={Taylor \& Francis}
}
@book{field2012discovering,
title={Discovering statistics using R},
author={Field, Andy and Miles, Jeremy and Field, Zo{\"e}},
year={2012},
publisher={Sage publications}
}
@article{whittingham2006we,
title={Why do we still use stepwise modelling in ecology and behaviour?},
author={Whittingham, Mark J and Stephens, Philip A and Bradbury, Richard B and Freckleton, Robert P},
journal={Journal of animal ecology},
volume={75},
number={5},
pages={1182--1189},
year={2006},
publisher={Wiley Online Library}
}
@article{chatfield1995model,
title={Model uncertainty, data mining and statistical inference},
author={Chatfield, Chris},
journal={Journal of the Royal Statistical Society: Series A (Statistics in Society)},
volume={158},
number={3},
pages={419--444},
year={1995},
publisher={Wiley Online Library}
}
@article{viechtbauer2010conducting,
title={Conducting meta-analyses in R with the metafor package},
author={Viechtbauer, Wolfgang and others},
journal={J Stat Softw},
volume={36},
number={3},
pages={1--48},
year={2010}
}
@book{good2013permutation,
title={Permutation tests: a practical guide to resampling methods for testing hypotheses},
author={Good, Phillip},
year={2013},
publisher={Springer Science \& Business Media}
}
@article{viechtbauer2015comparison,
title={A comparison of procedures to test for moderators in mixed-effects meta-regression models.},
author={Viechtbauer, Wolfgang and L{\'o}pez-L{\'o}pez, Jos{\'e} Antonio and S{\'a}nchez-Meca, Julio and Mar{\'\i}n-Mart{\'\i}nez, Fulgencio},
journal={Psychological methods},
volume={20},
number={3},
pages={360},
year={2015},
publisher={American Psychological Association}
}
@article{van2012automating,
title={Automating network meta-analysis},
author={van Valkenhoef, Gert and Lu, Guobing and de Brock, Bert and Hillege, Hans and Ades, AE and Welton, Nicky J},
journal={Research synthesis methods},
volume={3},
number={4},
pages={285--299},
year={2012},
publisher={Wiley Online Library}
}
@article{dias2013evidence,
title={Evidence synthesis for decision making 2: a generalized linear modeling framework for pairwise and network meta-analysis of randomized controlled trials},
author={Dias, Sofia and Sutton, Alex J and Ades, AE and Welton, Nicky J},
journal={Medical Decision Making},
volume={33},
number={5},
pages={607--617},
year={2013},
publisher={Sage Publications Sage CA: Los Angeles, CA}
}
@article{edwards2009indirect,
title={Indirect comparisons of treatments based on systematic reviews of randomised controlled trials},
author={Edwards, SJ and Clarke, MJ and Wordsworth, S and Borrill, J},
journal={International journal of clinical practice},
volume={63},
number={6},
pages={841--854},
year={2009},
publisher={Wiley Online Library}
}
@article{ioannidis2006indirect,
title={Indirect comparisons: the mesh and mess of clinical trials},
author={Ioannidis, John PA},
journal={The Lancet},
volume={368},
number={9546},
pages={1470--1472},
year={2006},
publisher={Elsevier}
}
@article{efthimiou2016getreal,
title={GetReal in network meta-analysis: a review of the methodology},
author={Efthimiou, Orestis and Debray, Thomas PA and van Valkenhoef, Gert and Trelle, Sven and Panayidou, Klea and Moons, Karel GM and Reitsma, Johannes B and Shang, Aijing and Salanti, Georgia and GetReal Methods Review Group},
journal={Research synthesis methods},
volume={7},
number={3},
pages={236--263},
year={2016},
publisher={Wiley Online Library}
}
@article{salanti2014evaluating,
title={Evaluating the quality of evidence from a network meta-analysis},
author={Salanti, Georgia and Del Giovane, Cinzia and Chaimani, Anna and Caldwell, Deborah M and Higgins, Julian PT},
journal={PloS one},
volume={9},
number={7},
pages={e99682},
year={2014},
publisher={Public Library of Science}
}
@book{diasbook,
title={Network Meta-Analysis for Decision-Making},
author={Dias, Sofia and Ades, AE and Welton, Nicky J and Jansen, Jeroen P and Sutton, Alexander J},
year={2018},
publisher={Wiley}
}
@article{song2009methodological,
title={Methodological problems in the use of indirect comparisons for evaluating healthcare interventions: survey of published systematic reviews},
author={Song, Fujian and Loke, Yoon K and Walsh, Tanya and Glenny, Anne-Marie and Eastwood, Alison J and Altman, Douglas G},
journal={Bmj},
volume={338},
pages={b1147},
year={2009},
publisher={British Medical Journal Publishing Group}
}
@article{dias2013evidence,
title={Evidence synthesis for decision making 2: a generalized linear modeling framework for pairwise and network meta-analysis of randomized controlled trials},
author={Dias, Sofia and Sutton, Alex and Ades, AE and Welton, Nicky},
journal={Medical Decision Making},
volume={33},
number={5},
pages={607--617},
year={2013},
publisher={Sage Publications Sage CA: Los Angeles, CA}
}
@article{lu2009modeling,
title={Modeling between-trial variance structure in mixed treatment comparisons},
author={Lu, Guobing and Ades, AE},
journal={Biostatistics},
volume={10},
number={4},
pages={792--805},
year={2009},
publisher={Oxford University Press}
}
@article{cipriani2013conceptual,
title={Conceptual and technical challenges in network meta-analysis},
author={Cipriani, Andrea and Higgins, Julian PT and Geddes, John R and Salanti, Georgia},
journal={Annals of internal medicine},
volume={159},
number={2},
pages={130--137},
year={2013},
publisher={Am Coll Physicians}
}
@article{krahn2013graphical,
title={A graphical tool for locating inconsistency in network meta-analyses},
author={Krahn, Ulrike and Binder, Harald and K{\"o}nig, Jochem},
journal={BMC medical research methodology},
volume={13},
number={1},
pages={35},
year={2013},
publisher={BioMed Central}
}
@article{dias2010checking,
title={Checking consistency in mixed treatment comparison meta-analysis},
author={Dias, S and Welton, NJ and Caldwell, DM and Ades, AE},
journal={Statistics in medicine},
volume={29},
number={7-8},
pages={932--944},
year={2010},
publisher={Wiley Online Library}
}
@article{shim2019network,
title={Network meta-analysis: application and practice using R software},
author={Shim, Sung Ryul and Kim, Seong-Jang and Lee, Jonghoo and R{\"u}cker, Gerta},
journal={Epidemiology and health},
volume={41},
pages={e2019013},
year={2019},
publisher={Korean Society of Epidemiology}
}
@article{cipriani2018comparative,
title={Comparative efficacy and acceptability of 21 antidepressant drugs for the acute treatment of adults with major depressive disorder: a systematic review and network meta-analysis},
author={Cipriani, Andrea and Furukawa, Toshi A and Salanti, Georgia and Chaimani, Anna and Atkinson, Lauren Z and Ogawa, Yusuke and Leucht, Stefan and Ruhe, Henricus G and Turner, Erick H and Higgins, Julian PT and others},
journal={Focus},
volume={16},
number={4},
pages={420--429},
year={2018},
publisher={Am Psychiatric Assoc}
}
@article{rucker2015package,
title={Package ‘netmeta’},
author={R{\"u}cker, Gerta and Schwarzer, Guido and Krahn, Ulrike and K{\"o}nig, Jochem and Schwarzer, Maintainer Guido},
journal={Network Meta-Analysis using Frequentist Methods (Version 0.7-0)},
year={2015}
}
@article{rucker2012network,
title={Network meta-analysis, electrical networks and graph theory},
author={R{\"u}cker, Gerta},
journal={Research synthesis methods},
volume={3},
number={4},
pages={312--324},
year={2012},
publisher={Wiley Online Library}
}
@book{aronow2019foundations,
title={Foundations of agnostic statistics},
author={Aronow, Peter M and Miller, Benjamin T},
year={2019},
publisher={Cambridge University Press}
}
@article{jackson2013matrix,
title={A matrix-based method of moments for fitting the multivariate random effects model for meta-analysis and meta-regression},
author={Jackson, Dan and White, Ian R and Riley, Richard D},
journal={Biometrical Journal},
volume={55},
number={2},
pages={231--245},
year={2013},
publisher={Wiley Online Library}
}
@article{senn2013issues,
title={Issues in performing a network meta-analysis},
author={Senn, Stephen and Gavini, Francois and Magrez, David and Scheen, Andre},