-
Notifications
You must be signed in to change notification settings - Fork 11
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Dependencies missing from setup.py? #26
Comments
Also, specifying the dependency bedtools would be useful. |
I think pybedtools will install bedtools if it cannot find the executable in the environment path. Not sure, will fix this with the next update of SV2. Thanks for all your contributions. |
I can't replicate the issue, I did a clean
|
Not sure how to include a local bedtools install without evoking conda. Any suggestions? |
pip install sv2
gives an error because Cython and numpy are missing.The text was updated successfully, but these errors were encountered: