python-package.yml

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python

name: Python package

on:
  push:
  pull_request:
    branches: [ "dev", "main" ]

jobs:
  build:

    runs-on: ${{ matrix.os }}
    strategy:
      fail-fast: false
      matrix:
        python-version: ["3.9"]
        os: ["macos-latest", "ubuntu-latest"]
    steps:
    - uses: actions/checkout@v3
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v3
      with:
        python-version: ${{ matrix.python-version }}
    - name: Install geos  # required for cartopy installation
      uses: ConorMacBride/install-package@v1
      with:
        brew: geos
        apt: libgeos-dev
    - name: Install dependencies
      run: |
        python -m pip install --upgrade pip
        if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
    - name: Install java
      uses: actions/setup-java@v3
      with:
        distribution: 'temurin'
        java-version: '11'
    - name: Check Java Install
      run: |
        java --version
    - name: pre-commit
      run: |
        pre-commit install
        pre-commit run --all-files
    - name: Test with pytest
      run: |
        pytest --runsetup
    - name: Generate Report
      run: |
        coverage run -m pytest
        coverage xml
    - name: Upload coverage reports to Codecov
      uses: codecov/codecov-action@v3
      with:
        file: ./coverage.xml
        flags: unittests
        verbose: true
        token: ${{secrets.CODECOV_TOKEN}}