diff --git a/build/nuke/Native/Vkd3d.cs b/build/nuke/Native/Vkd3d.cs
index 8f075df036..114455443b 100644
--- a/build/nuke/Native/Vkd3d.cs
+++ b/build/nuke/Native/Vkd3d.cs
@@ -44,12 +44,6 @@ partial class Build {
                     }
 
                     InheritedShell($"./git-sync-deps", SPIRVToolsPath / "utils").AssertZeroExitCode();
-                    InheritedShell($"./autogen.sh", Vkd3dPath).AssertZeroExitCode();
-
-                    var spirvToolsBuild = SPIRVToolsPath / "build";
-                    var vkd3dBuild = Vkd3dPath / "build";
-                    var vkd3dShaderCompiler = RootDirectory / "src" / "Microsoft" / "Vkd3dCompiler";
-                    var runtimes = RootDirectory / "src" / "Native" / "Silk.NET.Vkd3d.Native" / "runtimes";
 
                     // Get rid of the Vulkan library check since we will not be needing it.
                     File.WriteAllText(
@@ -57,6 +51,13 @@ partial class Build {
                         File.ReadAllText(Vkd3dPath / "configure.ac")
                             .Replace("[VKD3D_CHECK_VULKAN]", "[]"));
 
+                    InheritedShell($"./autogen.sh", Vkd3dPath).AssertZeroExitCode();
+
+                    var spirvToolsBuild = SPIRVToolsPath / "build";
+                    var vkd3dBuild = Vkd3dPath / "build";
+                    var vkd3dShaderCompiler = RootDirectory / "src" / "Microsoft" / "Vkd3dCompiler";
+                    var runtimes = RootDirectory / "src" / "Native" / "Silk.NET.Vkd3d.Native" / "runtimes";
+
                     foreach (var (triple, rid) in new[]
                     {
                         ("x86_64-linux-gnu", "linux-x64"),