From a84509b022533d24eeef263264798b60ef710fa4 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Gwendolyn=20O=2E=20D=C3=B6bel?=
 <81755070+GwennyGit@users.noreply.github.com>
Date: Mon, 15 Jul 2024 09:25:46 +0200
Subject: [PATCH] Update cmd_access.py #120 #121

---
 src/refinegems/cmd_access.py | 10 ++++++++++
 1 file changed, 10 insertions(+)

diff --git a/src/refinegems/cmd_access.py b/src/refinegems/cmd_access.py
index 460e610..84c835c 100644
--- a/src/refinegems/cmd_access.py
+++ b/src/refinegems/cmd_access.py
@@ -162,6 +162,16 @@ def gaps():
 # Find gaps via genes
 # -------------------     
 def get_gap_analysis_input(db_to_compare: Literal['KEGG', 'BioCyc']) -> dict:
+   """Form to retrieve input files for :py:func:`~refinegems.curation.gapfill.gap_analysis`
+
+   Args:
+       - db_to_compare (Literal['KEGG', 'BioCyc']): 
+           Database to compare model content to
+
+   Returns:
+       dict: 
+           Input dictionary for :py:func:`~refinegems.curation.gapfill.gap_analysis`
+   """
 
    parameters2inputs = {'organismid': None, 'gff_file': None, 'biocyc_files': None}