From be35b9f17f705bb0c3109c5de251a5bdbfdff994 Mon Sep 17 00:00:00 2001 From: Sai Sneha Date: Mon, 26 Feb 2024 12:41:59 +0530 Subject: [PATCH 1/3] feat: adding a README.MD --- README.MD | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/README.MD b/README.MD index e69de29..11bd8fc 100644 --- a/README.MD +++ b/README.MD @@ -0,0 +1,10 @@ +# README.MD - epipipeline v2.0.11 + +This repository contains code that can be used to standardise linelists and summaries. + +The standards currently used are: + + 1. Linelists: [YAML](https://github.com/dsih-artpark/data_documentation/documentation/EP/EP0005DS0014-KA_Dengue_LL/datadictionary.yaml), [MD]([YAML](https://github.com/dsih-artpark/data_documentation/documentation/EP/EP0005DS0014-KA_Dengue_LL/datadictionary.MD)) + 2. Daily Summaries: [YAML](https://github.com/dsih-artpark/data_documentation/documentation/EP/EP0006DS0015-KA_Dengue_Daily_SUM/datadictionary.yaml), [md](https://github.com/dsih-artpark/data_documentation/documentation/EP/EP0006DS0015-KA_Dengue_Daily_SUM/datadictionary.md) + +This package's latest stable release, v2.0.11, supports Karnataka data. \ No newline at end of file From a4310423642b7a50a506036e443ea7c325ada58a Mon Sep 17 00:00:00 2001 From: Sai Sneha Date: Mon, 26 Feb 2024 12:48:40 +0530 Subject: [PATCH 2/3] feat: small edits to README.MD --- README.MD | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/README.MD b/README.MD index 11bd8fc..0f52ac7 100644 --- a/README.MD +++ b/README.MD @@ -4,7 +4,7 @@ This repository contains code that can be used to standardise linelists and summ The standards currently used are: - 1. Linelists: [YAML](https://github.com/dsih-artpark/data_documentation/documentation/EP/EP0005DS0014-KA_Dengue_LL/datadictionary.yaml), [MD]([YAML](https://github.com/dsih-artpark/data_documentation/documentation/EP/EP0005DS0014-KA_Dengue_LL/datadictionary.MD)) - 2. Daily Summaries: [YAML](https://github.com/dsih-artpark/data_documentation/documentation/EP/EP0006DS0015-KA_Dengue_Daily_SUM/datadictionary.yaml), [md](https://github.com/dsih-artpark/data_documentation/documentation/EP/EP0006DS0015-KA_Dengue_Daily_SUM/datadictionary.md) +1. Linelists: [YAML](https://raw.githubusercontent.com/dsih-artpark/data_documentation/production/documentation/EP/EP0005DS0014-KA_Dengue_LL/datadictionary.yaml), [MD](https://raw.githubusercontent.com/dsih-artpark/data_documentation/production/documentation/EP/EP0005DS0014-KA_Dengue_LL/datadictionary.MD) +2. Daily Summaries: [YAML](https://raw.githubusercontent.com/dsih-artpark/data_documentation/production/documentation/EP/EP0006DS0015-KA_Dengue_Daily_SUM/datadictionary.yaml), [MD](https://raw.githubusercontent.com/dsih-artpark/data_documentation/production/documentation/EP/EP0006DS0015-KA_Dengue_Daily_SUM/datadictionary.md) -This package's latest stable release, v2.0.11, supports Karnataka data. \ No newline at end of file +This package's latest stable release, v2.0.11, supports Karnataka data. The package is still in a limited beta, and documentation and feature addition is underway. \ No newline at end of file From 44ad3476688f290407e23a7eeefec3871d0a2221 Mon Sep 17 00:00:00 2001 From: Sai Sneha Date: Tue, 27 Feb 2024 13:22:00 +0530 Subject: [PATCH 3/3] basic reorg --- src/{epipipeline_v2 => epipipeline}/__init__.py | 0 src/{epipipeline_v2 => epipipeline}/preprocess/__init__.py | 0 src/{epipipeline_v2 => epipipeline}/preprocess/dengue/__init__.py | 0 .../preprocess/dengue/karnataka.py | 0 src/{epipipeline_v2 => epipipeline}/preprocess/preprocess.py | 0 src/{epipipeline_v2 => epipipeline}/standardise/__init__.py | 0 src/{epipipeline_v2 => epipipeline}/standardise/dates.py | 0 src/{epipipeline_v2 => epipipeline}/standardise/demographics.py | 0 .../standardise/gisdata/__init__.py | 0 .../standardise/gisdata/geocode.py | 0 .../standardise/gisdata/karnataka.py | 0 src/{epipipeline_v2 => epipipeline}/standardise/karnataka.py | 0 src/{epipipeline_v2 => epipipeline}/ud/__init__.py | 0 src/{epipipeline_v2 => epipipeline}/ud/download.py | 0 14 files changed, 0 insertions(+), 0 deletions(-) rename src/{epipipeline_v2 => epipipeline}/__init__.py (100%) rename src/{epipipeline_v2 => epipipeline}/preprocess/__init__.py (100%) rename src/{epipipeline_v2 => epipipeline}/preprocess/dengue/__init__.py (100%) rename src/{epipipeline_v2 => epipipeline}/preprocess/dengue/karnataka.py (100%) rename src/{epipipeline_v2 => epipipeline}/preprocess/preprocess.py (100%) rename src/{epipipeline_v2 => epipipeline}/standardise/__init__.py (100%) rename src/{epipipeline_v2 => epipipeline}/standardise/dates.py (100%) rename src/{epipipeline_v2 => epipipeline}/standardise/demographics.py (100%) rename src/{epipipeline_v2 => epipipeline}/standardise/gisdata/__init__.py (100%) rename src/{epipipeline_v2 => epipipeline}/standardise/gisdata/geocode.py (100%) rename src/{epipipeline_v2 => epipipeline}/standardise/gisdata/karnataka.py (100%) rename src/{epipipeline_v2 => epipipeline}/standardise/karnataka.py (100%) rename src/{epipipeline_v2 => epipipeline}/ud/__init__.py (100%) rename src/{epipipeline_v2 => epipipeline}/ud/download.py (100%) diff --git a/src/epipipeline_v2/__init__.py b/src/epipipeline/__init__.py similarity index 100% rename from src/epipipeline_v2/__init__.py rename to src/epipipeline/__init__.py diff --git a/src/epipipeline_v2/preprocess/__init__.py b/src/epipipeline/preprocess/__init__.py similarity index 100% rename from src/epipipeline_v2/preprocess/__init__.py rename to src/epipipeline/preprocess/__init__.py diff --git a/src/epipipeline_v2/preprocess/dengue/__init__.py b/src/epipipeline/preprocess/dengue/__init__.py similarity index 100% rename from src/epipipeline_v2/preprocess/dengue/__init__.py rename to src/epipipeline/preprocess/dengue/__init__.py diff --git a/src/epipipeline_v2/preprocess/dengue/karnataka.py b/src/epipipeline/preprocess/dengue/karnataka.py similarity index 100% rename from src/epipipeline_v2/preprocess/dengue/karnataka.py rename to src/epipipeline/preprocess/dengue/karnataka.py diff --git a/src/epipipeline_v2/preprocess/preprocess.py b/src/epipipeline/preprocess/preprocess.py similarity index 100% rename from src/epipipeline_v2/preprocess/preprocess.py rename to src/epipipeline/preprocess/preprocess.py diff --git a/src/epipipeline_v2/standardise/__init__.py b/src/epipipeline/standardise/__init__.py similarity index 100% rename from src/epipipeline_v2/standardise/__init__.py rename to src/epipipeline/standardise/__init__.py diff --git a/src/epipipeline_v2/standardise/dates.py b/src/epipipeline/standardise/dates.py similarity index 100% rename from src/epipipeline_v2/standardise/dates.py rename to src/epipipeline/standardise/dates.py diff --git a/src/epipipeline_v2/standardise/demographics.py b/src/epipipeline/standardise/demographics.py similarity index 100% rename from src/epipipeline_v2/standardise/demographics.py rename to src/epipipeline/standardise/demographics.py diff --git a/src/epipipeline_v2/standardise/gisdata/__init__.py b/src/epipipeline/standardise/gisdata/__init__.py similarity index 100% rename from src/epipipeline_v2/standardise/gisdata/__init__.py rename to src/epipipeline/standardise/gisdata/__init__.py diff --git a/src/epipipeline_v2/standardise/gisdata/geocode.py b/src/epipipeline/standardise/gisdata/geocode.py similarity index 100% rename from src/epipipeline_v2/standardise/gisdata/geocode.py rename to src/epipipeline/standardise/gisdata/geocode.py diff --git a/src/epipipeline_v2/standardise/gisdata/karnataka.py b/src/epipipeline/standardise/gisdata/karnataka.py similarity index 100% rename from src/epipipeline_v2/standardise/gisdata/karnataka.py rename to src/epipipeline/standardise/gisdata/karnataka.py diff --git a/src/epipipeline_v2/standardise/karnataka.py b/src/epipipeline/standardise/karnataka.py similarity index 100% rename from src/epipipeline_v2/standardise/karnataka.py rename to src/epipipeline/standardise/karnataka.py diff --git a/src/epipipeline_v2/ud/__init__.py b/src/epipipeline/ud/__init__.py similarity index 100% rename from src/epipipeline_v2/ud/__init__.py rename to src/epipipeline/ud/__init__.py diff --git a/src/epipipeline_v2/ud/download.py b/src/epipipeline/ud/download.py similarity index 100% rename from src/epipipeline_v2/ud/download.py rename to src/epipipeline/ud/download.py