From d79ea317ba5210a8fdd9521dd45ab4cc084acfa5 Mon Sep 17 00:00:00 2001 From: Daniel Weindl Date: Tue, 8 Oct 2024 21:29:02 +0200 Subject: [PATCH] Sneyd_PNAS2002 --- tests/benchmark-models/test_petab_benchmark.py | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/tests/benchmark-models/test_petab_benchmark.py b/tests/benchmark-models/test_petab_benchmark.py index 23e67f0694..1960a03e44 100644 --- a/tests/benchmark-models/test_petab_benchmark.py +++ b/tests/benchmark-models/test_petab_benchmark.py @@ -96,6 +96,13 @@ class GradientCheckSettings: rtol_check=1e-2, rng_seed=1, ) +settings["Sneyd_PNAS2002"] = GradientCheckSettings( + atol_sim=1e-16, + rtol_sim=1e-10, + atol_check=1e-5, + rtol_check=1e-4, + # rng_seed=1, +) def assert_gradient_check_success( @@ -172,13 +179,6 @@ def test_benchmark_gradient(model, scale, sensitivity_method, request): # FIXME pytest.skip() - if ( - model in ("Sneyd_PNAS2002",) - and sensitivity_method == SensitivityMethod.forward - ): - # FIXME - pytest.skip() - petab_problem = benchmark_models_petab.get_problem(model) petab.flatten_timepoint_specific_output_overrides(petab_problem)