From 3c6838e8138ff9333c8017365ff9f8e24e155482 Mon Sep 17 00:00:00 2001 From: Albert GitHub Date: Mon, 10 Feb 2025 09:20:21 -0500 Subject: [PATCH] DOC: Expand the bibliography with grepped DOI entries Used schneiderfelipe/doi, especially the file: https://github.com/schneiderfelipe/doi/blob/master/src/doi2bib --- Documentation/Doxygen/doxygen.bib | 871 ++++++++++++++++++++++++++++++ 1 file changed, 871 insertions(+) diff --git a/Documentation/Doxygen/doxygen.bib b/Documentation/Doxygen/doxygen.bib index 96ee850dbac..9f3483d7a0a 100644 --- a/Documentation/Doxygen/doxygen.bib +++ b/Documentation/Doxygen/doxygen.bib @@ -1549,3 +1549,874 @@ @article{zijdenbos1994 doi = {10.1109/42.363096}, url = {https://doi.org/10.1109/42.363096} } +@book{book_2003, + title={Computer Aided Systems Theory - EUROCAST 2003: 9th International Workshop on Computer Aided Systems Theory Las Palmas de Gran Canaria, Spain, February 24-28, 2003 Revised Selected Papers}, + ISBN={9783540452102}, + ISSN={1611-3349}, + url={https//dx.doi.org/10.1007/b13239}, + DOI={10.1007/b13239}, + journal={Lecture Notes in Computer Science}, + publisher={Springer Berlin Heidelberg}, + year={2003} } +@inproceedings{Aylward_2016, + title={Ultrasound spectroscopy}, + url={https//dx.doi.org/10.1109/ISBI.2016.7493437}, + DOI={10.1109/isbi.2016.7493437}, + booktitle={2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI)}, + publisher={IEEE}, + author={Aylward, S. R. and McCormick, M. and Kang, H. J. and Razzaque, S. and Kwitt, R. and Niethammer, M.}, + year={2016}, + month=apr, pages={1013–1016} } +@article{Albu_2008, + title={A Morphology-Based Approach for Interslice Interpolation of Anatomical Slices From Volumetric Images}, + volume={55}, + ISSN={1558-2531}, + url={https//dx.doi.org/10.1109/TBME.2008.921158}, + DOI={10.1109/tbme.2008.921158}, + number={8}, + journal={IEEE Transactions on Biomedical Engineering}, + publisher={Institute of Electrical and Electronics Engineers (IEEE)}, + author={Albu, Alexandra Branzan and Beugeling, Trevor and Laurendeau, Denis}, + year={2008}, + month=aug, pages={2022–2038} } +@article{McCormick_2011, + title={Bayesian Regularization Applied to Ultrasound Strain Imaging}, + volume={58}, + ISSN={1558-2531}, + url={https//dx.doi.org/10.1109/TBME.2011.2106500}, + DOI={10.1109/tbme.2011.2106500}, + number={6}, + journal={IEEE Transactions on Biomedical Engineering}, + publisher={Institute of Electrical and Electronics Engineers (IEEE)}, + author={McCormick, M and Rubert, N and Varghese, T}, + year={2011}, + month=jun, pages={1612–1620} } +@article{McCormick_2014, + title={ITK: enabling reproducible research and open science}, + volume={8}, + ISSN={1662-5196}, + url={https//dx.doi.org/10.3389/fninf.2014.00013}, + DOI={10.3389/fninf.2014.00013}, + journal={Frontiers in Neuroinformatics}, + publisher={Frontiers Media SA}, + author={McCormick, Matthew and Liu, Xiaoxiao and Jomier, Julien and Marion, Charles and Ibanez, Luis}, + year={2014} } +@article{Tustison_2005, + title={N-D $C^k$ B-Spline Scattered Data Approximation}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/0d55to}, + DOI={10.54294/0d55to}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Tustison, Nicholas J. and Gee, James}, + year={2005}, + month=nov } +@article{Hernandez_Cerdan_2016, + title={Isotropic and Steerable Wavelets in N Dimensions. A multiresolution analysis framework.}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/0e1c0748fe24}, + DOI={10.54294/0e1c0748fe24}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Hernandez-Cerdan, Pablo}, + year={2016}, + month=jul } +@article{Lehmann_2010_b, + title={FFT based convolution}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/0iky0u}, + DOI={10.54294/0iky0u}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaetan}, + year={2010}, + month=jul } +@article{Lehmann_2006_a, + title={Image projections along an axis}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/0pjyho}, + DOI={10.54294/0pjyho}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaetan}, + year={2006}, + month=jan } +@article{Tustison_2009_d, + title={Introducing Dice, Jaccard, and Other Label Overlap Measures To ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/1vixgg}, + DOI={10.54294/1vixgg}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Tustison, Nicholas J. and Gee, James}, + year={2009}, + month=dec } +@article{Mccormick_2017, + title={N-Dimensional Computation of Strain Tensor Images in the Insight Toolkit}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/1wtpo8}, + DOI={10.54294/1wtpo8}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mccormick, Matthew}, + year={2017}, + month=may } +@article{Mosaliganti_2009_a, + title={level set segmentation using coupled active surfaces}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/23ugmy}, + DOI={10.54294/23ugmy}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mosaliganti, Kishore and Smith, Benjamin and Gelas, Arnaud and Gouaillard, Alexandre and megason, sean}, + year={2009}, + month=apr } +@article{Lehmann_2006_b, + title={Kappa Sigma Clipping}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/39qekn}, + DOI={10.54294/39qekn}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaetan}, + year={2006}, + month=nov } +@article{Lehmann_2006_c, + title={Slice by slice filtering with ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/47329s}, + DOI={10.54294/47329s}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaetan}, + year={2006}, + month=nov } +@article{Mccormick_2012, + title={An ITK Class that Splits Multi-Component Images}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/4c92vb}, + DOI={10.54294/4c92vb}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mccormick, Matthew}, + year={2012}, + month=jul } +@article{Staring_2008, + title={Generating a Deformation Field from a Transform}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/4ids6q}, + DOI={10.54294/4ids6q}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Staring, Marius}, + year={2008}, + month=jun } +@article{Gouaillard_2006, + title={ItkQuadEdgeMesh: A Discrete Orientable 2-Manifold Data Structure for Image Processing}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/4mx7kk}, + DOI={10.54294/4mx7kk}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Gouaillard, Alexandre and Florez-Valencia, Leonardo and Boix, Eric}, + year={2006}, + month=sep } +@article{Wu_2010, + title={ITK-Based Implementation of Two-Projection 2D/3D Registration Method with an Application in Patient Setup for External Beam Radiotherapy}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/6f280b}, + DOI={10.54294/6f280b}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Wu, Jian}, + year={2010}, + month=dec } +@article{Ibanez_2014, + title={STL file format MeshIO class for ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/7rr2te}, + DOI={10.54294/7rr2te}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Ibanez, Luis}, + year={2014}, + month=jan } +@article{Lehmann_2006_d, + title={Robust Automatic Threshold Selection}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/7w23qz}, + DOI={10.54294/7w23qz}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaetan}, + year={2006}, + month=nov } +@article{Gelas_2007, + title={Parameterization of discrete surfaces}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/8ga88z}, + DOI={10.54294/8ga88z}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Gelas, Arnaud and Gouaillard, Alexandre}, + year={2007}, + month=nov } +@article{Lowekamp_2018, + title={Scalable Simple Linear Iterative Clustering (SSLIC) Using a Generic and Parallel Approach}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/8hic7f}, + DOI={10.54294/8hic7f}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lowekamp, Bradley and Chen, David and Yaniv, Ziv and Yoo, Terry}, + year={2018}, + month=jul } +@article{Mosaliganti_2009_b, + title={Level Set Segmentation: Active Contours without edge}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/8jk6oy}, + DOI={10.54294/8jk6oy}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mosaliganti, Kishore and Smith, Benjamin and Gelas, Arnaud and Gouaillard, Alexandre and megason, sean}, + year={2009}, + month=mar } +@article{Tustison_2016, + title={Two Luis Miguel fans walk into a bar in Nagoya ---> (yada, yada, yada) ---> an ITK-implementation of a popular patch-based denoising filter}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/9f5wt3}, + DOI={10.54294/9f5wt3}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Tustison, Nicholas J. and Manjon, Jose}, + year={2016}, + month=aug } +@article{Mccormick_2016, + title={Performance Benchmarking the Insight Toolkit}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/9feae9}, + DOI={10.54294/9feae9}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mccormick, Matthew and Kang, Hyun-jae and BARRE, Sebastien}, + year={2016}, + month=jul } +@article{Zuki__2016_b, + title={ND morphological contour interpolation}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/achtrg}, + DOI={10.54294/achtrg}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Zukić, Dženan and Vicory, Jared and Mccormick, Matthew and Wisse, Laura and Gerig, Guido and Yushkevich, Paul and Aylward, Stephen}, + year={2016}, + month=aug } +@article{Beare_2008, + title={Morphology with parabolic structuring elements}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/aq68pt}, + DOI={10.54294/aq68pt}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Beare, Richard}, + year={2008}, + month=dec } +@article{Lehmann_2005, + title={Binary morphological closing and opening image filters}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/bcwtvq}, + DOI={10.54294/bcwtvq}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaetan}, + year={2005}, + month=nov } +@article{Mosaliganti_2010, + title={Support for Streaming the JPEG2000 File Format}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/bo53br}, + DOI={10.54294/bo53br}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mosaliganti, Kishore and Ibanez, Luis and Megason, Sean}, + year={2010}, + month=aug } +@article{Lehmann_2008, + title={Efficient contour detection in binary and label images}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/c7d3gv}, + DOI={10.54294/c7d3gv}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaetan}, + year={2008}, + month=apr } +@article{Vidal_Migallon_2013, + title={GPU and CPU implementation of Young - Van Vliet’s Recursive Gaussian Smoothing Filter}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/cpyaig}, + DOI={10.54294/cpyaig}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Vidal-Migallon, Irina and Commowick, Olivier and Pennec, Xavier and Dauguet, Julien and Vercauteren, Tom}, + year={2013}, + month=jul } +@article{Mueller_2010, + title={Cuberille Implicit Surface Polygonization for ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/df9mgw}, + DOI={10.54294/df9mgw}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mueller, Dan}, + year={2010}, + month=jul } +@article{Tustison_2007_b, + title={Go-Go Gabor Gadgetry}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/dhogdz}, + DOI={10.54294/dhogdz}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Tustison, Nicholas J. and Gee, James}, + year={2007}, + month=apr } +@article{Tustison_2009_a, + title={Image Kernel Convolution}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/e292kx}, + DOI={10.54294/e292kx}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Tustison, Nicholas J. and Gee, James}, + year={2009}, + month=jan } +@article{Schaerer_2014, + title={A MultipleImageIterator for iterating over multiple images simultaneously}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/e5lmyz}, + DOI={10.54294/e5lmyz}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Schaerer, Joël}, + year={2014}, + month=feb } +@article{Beare_2011, + title={Histogram-based thresholding - some missing methods}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/efycla}, + DOI={10.54294/efycla}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Beare, Richard}, + year={2011}, + month=jun } +@article{Mirebeau_2014, + title={Anisotropic Diffusion in ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/en3833}, + DOI={10.54294/en3833}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mirebeau, Jean-marie and Fehrenbach, Jérôme and Risser, Laurent and Tobji, Shaza}, + year={2014}, + month=dec } +@article{Vigneault_2016, + title={Perturbing Mesh Vertices with Additive Gaussian Noise}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/evr01z}, + DOI={10.54294/evr01z}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Vigneault, Davis}, + year={2016}, + month=nov } +@article{Tustison_2011, + title={Run-Length Matrices For Texture Analysis}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/ex0itu}, + DOI={10.54294/ex0itu}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Tustison, Nicholas J. and Gee, James}, + year={2011}, + month=may } +@article{Kim_2011, + title={Affine Transformation for Landmark Based Registration Initializer in ITK}, + url={https//dx.doi.org/10.54294/fge470}, + DOI={10.54294/fge470}, + journal={The MIDAS Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Kim, Eun young and Johnson, Hans and Williams, Norman}, + year={2011}, + month=jul } +@article{Hatt_2012, + title={Multi-scale Steerable Phase-Symmetry Filters for ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/gcb82u}, + DOI={10.54294/gcb82u}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Hatt, Charles}, + year={2012}, + month=mar } +@article{Urish_2005, + title={Unsupervised Segmentation for Myofiber Counting in Immunofluorescent Microscopy Images}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/h1vbsl}, + DOI={10.54294/h1vbsl}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Urish, Kenneth and August, Jonas and Huard, Johnny}, + year={2005}, + month=aug } +@article{Warfield_2006, + title={FFT Complex to Complex filters and helper classes}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/h4j7t7}, + DOI={10.54294/h4j7t7}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Warfield, Simon}, + year={2006}, + month=oct } +@article{Johnson_2007, + title={BRAINSFit: Mutual Information Registrations of Whole-Brain 3D Images, Using the Insight Toolkit}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/hmb052}, + DOI={10.54294/hmb052}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Johnson, Hans and Harris, Greg and Williams, Kent}, + year={2007}, + month=oct } +@article{Beare_2005, + title={Finding regional extrema - methods and performance}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/hva3gz}, + DOI={10.54294/hva3gz}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Beare, Richard and Lehmann, Gaetan}, + year={2005}, + month=dec } +@article{Heibel_2007, + title={Shaped Neighborhood based Flood Filled Conditional Iterators}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/iei8xt}, + DOI={10.54294/iei8xt}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Heibel, Hauke and Groher, Martin}, + year={2007}, + month=nov } +@article{Beare_2007_a, + title={Grayscale morphological attribute operations}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/ifvjls}, + DOI={10.54294/ifvjls}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Beare, Richard}, + year={2007}, + month=nov } +@article{Beare_2007_b, + title={Efficient implementation of kernel filtering}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/igq8fn}, + DOI={10.54294/igq8fn}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Beare, Richard and Lehmann, Gaetan}, + year={2007}, + month=jul } +@article{Shamonin_2012, + title={An OpenCL implementation of the Gaussian pyramid and the resampler}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/j5h811}, + DOI={10.54294/j5h811}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Shamonin, Denis and Staring, Marius}, + year={2012}, + month=dec } +@article{Baghdadi_2006, + title={MINC2.0 IO Support for ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/j8lsa6}, + DOI={10.54294/j8lsa6}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Baghdadi, Leila}, + year={2006}, + month=apr } +@article{Tustison_2010, + title={N4ITK: Nick’s N3 ITK Implementation For MRI Bias Field Correction}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/jculxw}, + DOI={10.54294/jculxw}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Tustison, Nicholas J. and Gee, James}, + year={2010}, + month=dec } +@article{Burstein_2006, + title={Support for “cub” image format}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/k9nj7c}, + DOI={10.54294/k9nj7c}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Burstein, Pablo and Yushkevich, Paul and Gee, James}, + year={2006}, + month=aug } +@article{Beare_2006, + title={The watershed transform in ITK - discussion and new developments}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/lf8u75}, + DOI={10.54294/lf8u75}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Beare, Richard and Lehmann, Gaetan}, + year={2006}, + month=jun } +@article{Bowers_2013, + title={Principal Components Analysis of Scalar, Vector, and Mesh Vertex Data}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/loekqj}, + DOI={10.54294/loekqj}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Bowers, Michael and Younes, Laurent}, + year={2013}, + month=aug } +@article{Macia_2007, + title={Generalized Computation of Gaussian Derivatives Using ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/mrg5is}, + DOI={10.54294/mrg5is}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Macia, Ivan}, + year={2007}, + month=oct } +@article{Gao_2006, + title={Conformal Flattening ITK Filter}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/msr7a5}, + DOI={10.54294/msr7a5}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Gao, Yi and Melonakos, John and Melonakos, John and Tannenbaum, Allen}, + year={2006}, + month=jul } +@article{Yushkevich_2009, + title={Gaussian Interpolation}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/n8k79e}, + DOI={10.54294/n8k79e}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Yushkevich, Paul and Tustison, Nicholas J. and Gee, James}, + year={2009}, + month=nov } +@article{Tustison_2009_b, + title={Stochastic Fractal Dimension Image}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/ne109t}, + DOI={10.54294/ne109t}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Tustison, Nicholas J. and Gee, James}, + year={2009}, + month=apr } +@article{Woehr_2009, + title={A Fast Approximation to the Bilateral Filter for ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/noo5vc}, + DOI={10.54294/noo5vc}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Woehr, Jordan}, + year={2009}, + month=aug } +@article{Bigler_2008, + title={MR Parameter Map Suite: ITK Classes for Calculating Magnetic Resonance T2 and T1 Parameter Maps}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/o8w4c0}, + DOI={10.54294/o8w4c0}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Bigler, Don and Meadowcroft, Mark and Sun, Xiaoyan and Vesek, Jeffrey and Dresner, Alex and Smith, Michael and Yang, Qing}, + year={2008}, + month=jun } +@article{Pincus_2006, + title={ContourExtractor2DImageFilter: A subpixel-precision image isocontour extraction filter.}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/olkmog}, + DOI={10.54294/olkmog}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Pincus, Zachary}, + year={2006}, + month=feb } +@article{Lowekamp_2013, + title={BinShrink: A multi-resolution filter with cache efficient averaging.}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/p39qox}, + DOI={10.54294/p39qox}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lowekamp, Bradley and Chen, David}, + year={2013}, + month=nov } +@article{Lehmann_2007, + title={Label object representation and manipulation with ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/q6auw4}, + DOI={10.54294/q6auw4}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaetan}, + year={2007}, + month=aug } +@article{Vimort_2017_b, + title={Computing Textural Feature Maps for N-Dimensional images}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/qy48ty}, + DOI={10.54294/qy48ty}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Vimort, Jean-baptiste and Mccormick, Matthew and Budin, Francois and Paniagua, Beatriz}, + year={2017}, + month=jul } +@article{Gelas_2013, + title={Laplacian Mesh Deformation}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/s91axg}, + DOI={10.54294/s91axg}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Gelas, Arnaud}, + year={2013}, + month=jun } +@article{Padfield_2013, + title={A Label Geometry Image Filter for Multiple Object Measurement}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/saa3nn}, + DOI={10.54294/saa3nn}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Padfield, Dirk and Miller, James}, + year={2013}, + month=mar } +@article{Zuki__2016_a, + title={RLEImage: run-length encoded memory compression scheme for an itk::Image}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/t82x76}, + DOI={10.54294/t82x76}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Zukić, Dženan and Mccormick, Matthew and Gerig, Guido and Yushkevich, Paul}, + year={2016}, + month=aug } +@article{Bican_2006, + title={Polar Transforms for ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/t8t3j2}, + DOI={10.54294/t8t3j2}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Bican, Jakub}, + year={2006}, + month=oct } +@article{Tustison_2009_c, + title={Meeting Andy Warhol Somewhere Over the Rainbow: RGB Colormapping and ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/tmojbk}, + DOI={10.54294/tmojbk}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Tustison, Nicholas J. and Zhang, Hui and Lehmann, Gaetan and Yushkevich, Paul and Gee, James}, + year={2009}, + month=jan } +@article{Schmidt_Richberg_2014, + title={A Flexible Variational Registration Framework}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/ts6kgm}, + DOI={10.54294/ts6kgm}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Schmidt-Richberg, Alexander and Werner, René and Handels, Heinz and Ehrhardt, Jan}, + year={2014}, + month=may } +@article{Lehmann_2010_c, + title={Deconvolution: infrastructure and reference algorithms}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/tvgfv1}, + DOI={10.54294/tvgfv1}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaëtan}, + year={2010}, + month=aug } +@article{Antiga_2007, + title={Generalizing vesselness with respect to dimensionality and shape}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/urgadx}, + DOI={10.54294/urgadx}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Antiga, Luca}, + year={2007}, + month=aug } +@article{Vercauteren_2008, + title={Diffeomorphic Demons Using ITK’s Finite Difference Solver Hierarchy}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/ux2obj}, + DOI={10.54294/ux2obj}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Vercauteren, Tom and Pennec, Xavier and Perchant, Aymeric and Ayache, Nicholas}, + year={2008}, + month=nov } +@article{Vimort_2017_a, + title={Computing Bone Morphometric Feature Maps from 3-Dimensional Images}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/vctqy4}, + DOI={10.54294/vctqy4}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Vimort, Jean-baptiste and Mccormick, Matthew and Paniagua, Beatriz}, + year={2017}, + month=nov } +@article{Lehmann_2010_a, + title={Noise simulation}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/vh6vbw}, + DOI={10.54294/vh6vbw}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaetan}, + year={2010}, + month=jul } +@article{Zhu_2011, + title={Triangle Mesh Subdivision}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/vw0ke0}, + DOI={10.54294/vw0ke0}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Zhu, Wanlin}, + year={2011}, + month=jul } +@article{Hawley_2009, + title={Reader/Writer for Analyze Object Maps for ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/w2jytv}, + DOI={10.54294/w2jytv}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Hawley, Jeffrey and Johnson, Hans}, + year={2009}, + month=mar } +@article{Mosaliganti_2009_c, + title={Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/wvwmf8}, + DOI={10.54294/wvwmf8}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mosaliganti, Kishore and Smith, Benjamin and Gelas, Arnaud and Gouaillard, Alexandre and Megason, Sean}, + year={2009}, + month=may } +@article{Lehmann_2006_e, + title={FFT Shift}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/xd0lzg}, + DOI={10.54294/xd0lzg}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaetan}, + year={2006}, + month=oct } +@article{Lehmann_2006_f, + title={Label overlay}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/xr1bvx}, + DOI={10.54294/xr1bvx}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lehmann, Gaetan}, + year={2006}, + month=feb } +@article{Tustison_2017, + title={A patch-based framework for new ITK functionality: Joint fusion, denoising, and non-local super-resolution}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/ywuouh}, + DOI={10.54294/ywuouh}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Tustison, Nicholas J. and Avants, Brian and Wang, Hongzhi and Xie, Long and Coupe, Pierrick and Yushkevich, Paul and Manjon, Jose}, + year={2017}, + month=mar } +@article{Mueller_2008, + title={Fast Marching Minimal Path Extraction in ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/z5zwhh}, + DOI={10.54294/z5zwhh}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mueller, Dan}, + year={2008}, + month=mar } +@article{Zosso_2007, + title={Direct Fourier Tomographic Reconstruction Image-To-Image Filter}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/z83ly1}, + DOI={10.54294/z83ly1}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Zosso, Dominique and Bach Cuadra, Meritxell and Thiran, Jean-Philippe}, + year={2007}, + month=aug } +@article{Tustison_2007_a, + title={Gridding Graphic Graticules}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/ze1ssz}, + DOI={10.54294/ze1ssz}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Tustison, Nicholas J. and Avants, Brian and Gee, James}, + year={2007}, + month=jan } +@article{Mccormick_2010_a, + title={Higher Order Accurate Derivative and Gradient Calculation in ITK}, + ISSN={2327-770X}, + url={https//dx.doi.org/10.54294/zv7979}, + DOI={10.54294/zv7979}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mccormick, Matthew}, + year={2010}, + month=nov } +@article{Mccormick_2010_b, + title={An Open Source, Fast Ultrasound B-Mode Implementation for Commodity Hardware}, + ISSN={2327-770X}, + url={http://dx.doi.org/10.54294/yjowe4}, + DOI={10.54294/yjowe4}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Mccormick, Matthew}, + year={2010}, + month=may } +@article{Lowekamp_2010, + title={A Streaming IO Base Class and Support for Streaming the MRC and VTK File Format}, + ISSN={2327-770X}, + url={http://dx.doi.org/10.54294/ufs19w}, + DOI={10.54294/ufs19w}, + journal={The Insight Journal}, + publisher={NumFOCUS - Insight Software Consortium (ITK)}, + author={Lowekamp, Bradley and Chen, David}, + year={2010}, + month=jun }