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[Enhancement suggestion]: add new post normalisation script that recalculates predicted values #51

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ew367 opened this issue Feb 26, 2024 · 1 comment
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enhancement New feature or request

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ew367 commented Feb 26, 2024

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Enhancement suggestion

create a new script that recalculates DNAm predicted variables (e.g. DNAmAge, CorticalClockAge, Smoking score (for blood data), CETYGO scores) post normalisation and outputs a trimmed down csv file containing only covariates for downstream analysis and removing cols used only for QC (e.g. x.cp)

Potenially add section to config.r file for user to define covariates to include

@ew367 ew367 added the enhancement New feature or request label Feb 26, 2024
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ew367 commented Feb 26, 2024

it might also be nice to produce cor plots/stats of how much the predictions change between pre and post normalisation data

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