From ed291ff7c8695923a48ae53588e0b8646f083cbc Mon Sep 17 00:00:00 2001 From: jamesmbaazam Date: Fri, 21 Jun 2024 11:24:21 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20epiverse?= =?UTF-8?q?-trace/epichains@17385cf1973e18a1d21d84c1300e39719dafd5c7=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- dev/LICENSE-text.html | 81 +++- dev/LICENSE.html | 83 ++-- .../branching_process_literature.html | 191 ++++++--- dev/articles/design-principles.html | 110 +++-- dev/articles/epichains.html | 148 ++++--- dev/articles/index.html | 84 ++-- dev/articles/interventions.html | 104 +++-- dev/articles/projecting_incidence.html | 387 +++++++++++------- .../figure-html/viz-1.png | Bin 77443 -> 163682 bytes dev/articles/theoretical_background.html | 104 +++-- dev/authors.html | 96 +++-- dev/deps/bootstrap-5.3.1/bootstrap.min.css | 2 +- dev/deps/data-deps.txt | 9 - dev/index.html | 99 +++-- dev/news/index.html | 87 ++-- dev/pkgdown.js | 2 + dev/pkgdown.yml | 6 +- dev/reference/aggregate.epichains.html | 107 +++-- dev/reference/covid19_sa.html | 97 +++-- dev/reference/dborel.html | 101 +++-- dev/reference/dot-adjust_next_gen.html | 101 +++-- .../dot-check_generation_time_valid.html | 89 ++-- .../dot-check_offspring_func_valid.html | 93 +++-- dev/reference/dot-check_sim_args.html | 113 +++-- dev/reference/dot-check_statistic_args.html | 101 +++-- dev/reference/dot-check_time_args.html | 109 +++-- dev/reference/dot-complementary_logprob.html | 93 +++-- dev/reference/dot-epichains.html | 119 ++++-- dev/reference/dot-epichains_summary.html | 115 ++++-- dev/reference/dot-gborel_size_ll.html | 105 +++-- dev/reference/dot-geom_length_ll.html | 97 +++-- dev/reference/dot-get_statistic_func.html | 90 ++-- .../dot-get_susceptible_offspring.html | 101 +++-- dev/reference/dot-init_susc_pop.html | 101 +++-- dev/reference/dot-is_epichains.html | 97 +++-- dev/reference/dot-is_epichains_summary.html | 93 +++-- dev/reference/dot-nbinom_size_ll.html | 109 +++-- dev/reference/dot-new_epichains.html | 113 +++-- dev/reference/dot-new_epichains_summary.html | 109 +++-- dev/reference/dot-offspring_ll.html | 113 +++-- dev/reference/dot-pois_length_ll.html | 97 +++-- dev/reference/dot-pois_size_ll.html | 97 +++-- dev/reference/dot-rbinom_size.html | 105 +++-- dev/reference/dot-rgen_length.html | 105 +++-- .../dot-sample_possible_offspring.html | 109 +++-- dev/reference/dot-update_chain_stat.html | 101 +++-- dev/reference/dot-validate_epichains.html | 93 +++-- .../dot-validate_epichains_summary.html | 93 +++-- dev/reference/epichains-package.html | 90 ++-- dev/reference/head.epichains.html | 101 +++-- dev/reference/index.html | 189 +++++++-- dev/reference/likelihood.html | 132 ++++-- dev/reference/print.epichains.html | 99 +++-- dev/reference/print.epichains_summary.html | 103 +++-- dev/reference/rborel.html | 101 +++-- dev/reference/rgborel.html | 109 +++-- dev/reference/simulate_chain_stats.html | 123 ++++-- dev/reference/simulate_chains.html | 139 +++++-- dev/reference/summary.epichains.html | 103 +++-- dev/reference/summary.epichains_summary.html | 99 +++-- dev/search.json | 2 +- dev/sitemap.xml | 224 +++++++--- 62 files changed, 4499 insertions(+), 1874 deletions(-) diff --git a/dev/LICENSE-text.html b/dev/LICENSE-text.html index cfb6fc85..ec799a8e 100644 --- a/dev/LICENSE-text.html +++ b/dev/LICENSE-text.html @@ -1,56 +1,93 @@ -License • epichains Skip to contents -