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split.c
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/* Splitting the documents into training and test sets. */
/* Copyright (C) 1997, 1998, 1999 Andrew McCallum
Written by: Sean Slattery <[email protected]>
This file is part of the Bag-Of-Words Library, `libbow'.
This library is free software; you can redistribute it and/or
modify it under the terms of the GNU Library General Public License
as published by the Free Software Foundation, version 2.
This library is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
Library General Public License for more details.
You should have received a copy of the GNU Library General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111, USA */
#include <argp.h>
#include <bow/libbow.h>
#include <math.h>
#include <time.h>
#include <sys/time.h>
#include <unistd.h>
/* Different ways of specifying how to do the split */
typedef enum {
bow_files_source_file = 10, /* get docs for a type from a file */
bow_files_source_fraction, /* do a random fraction split of docs */
bow_files_source_fraction_remaining, /* random fraction of untagged docs */
bow_files_source_fraction_train, /* a random fraction of the training docs */
bow_files_source_number, /* do a random number split of docs */
bow_files_source_number_remaining, /* ditto, but proportions from untagged */
bow_files_source_number_train, /* take a random number of training docs */
bow_files_source_remaining, /* use remaining docs for a file type */
bow_files_source_num_per_class, /* pick a random number from each class */
bow_files_source_num_per_class_remaining, /* ditto, but prop from untagged */
bow_files_source_fancy_counts /* pick the random number specified for each class */
} bow_files_source_type;
/* A structure for maintining information about fancy counts */
typedef struct _bow_split_fancy_count {
char *class_name;
int num_docs;
} bow_split_fancy_count;
/* How documents of each type are being selected */
static bow_files_source_type bow_test_files_source = bow_files_source_number;
static bow_files_source_type bow_train_files_source = bow_files_source_remaining;
static bow_files_source_type bow_unlabeled_files_source = bow_files_source_number;
static bow_files_source_type bow_ignore_files_source = bow_files_source_number;
static bow_files_source_type bow_validation_files_source = bow_files_source_number;
/* The fraction used for selecting each type */
static float bow_test_fraction;
static float bow_train_fraction;
static float bow_unlabeled_fraction;
static float bow_ignore_fraction;
static float bow_validation_fraction;
/* The number for selecting each type for both num_per_class and number */
static int bow_test_number = 0;
static int bow_train_number;
static int bow_unlabeled_number = 0;
static int bow_ignore_number = 0;
static int bow_validation_number = 0;
/* The filename containing lists of documents for each type */
static char *bow_test_filename;
static char *bow_train_filename;
static char *bow_unlabeled_filename;
static char *bow_ignore_filename;
static char *bow_validation_filename;
/* The numbers to select from each class for fancy counts for each type*/
static bow_split_fancy_count *bow_test_fancy_counts;
static bow_split_fancy_count *bow_train_fancy_counts;
static bow_split_fancy_count *bow_unlabeled_fancy_counts;
static bow_split_fancy_count *bow_ignore_fancy_counts;
static bow_split_fancy_count *bow_validation_fancy_counts;
/* When using files to set the test/train split, compare filenames by
using this many directory components as basename only, not their
complete filenames. */
int bow_test_set_files_use_basename = 0;
enum {
TEST_SOURCE = 5000,
TRAIN_SOURCE,
UNLABELED_SOURCE,
IGNORE_SOURCE,
VALIDATION_SOURCE,
SET_TEST_FILES_KEY,
SET_TEST_FILES_USE_BASENAME_KEY
};
static struct argp_option bow_split_options[] =
{
{0, 0, 0, 0,
"Splitting options:", 10},
{"test-set", TEST_SOURCE, "SOURCE", 0,
"How to select the testing documents. "
"A number between 0 and 1 inclusive "
"with a decimal point indicates a random fraction of all documents. "
"The number of documents selected from each class is determined "
"by attempting to match the proportions of the non-ignore documents. "
"A number with no decimal point indicates the number of documents "
"to select randomly. "
"Alternatively, a suffix of `pc' indicates the number of documents "
"per-class to tag. "
"The suffix 't' for a number or proportion indicates to tag documents from the "
"pool of training documents, not the untagged documents. "
"`remaining' selects all documents that remain untagged at the end. "
"Anything else is interpreted as a filename listing documents to select. "
"Default is `0.0'."},
/* The following text was removed from above:
"by attempting to match the proportions of the non-ignore documents; "
"however, if the number is followed by an `r' (for `remaining'), "
"then it attempts to match the proportions of the thus-far "
"untagged documents instead. "
"A number with no decimal point indicates the number of documents "
"to select randomly. "
"A suffix of `r' can be used similarly to above. "
"(The above selection methods are actually run last, which is "
"important since this effects the meaning of `remaining'.) "
We should document the "fancy counts" method here in this comment:
*/
{"train-set", TRAIN_SOURCE, "SOURCE", 0,
"How to select the training documents. Same format as --test-set. Default is "
"`remaining'."},
{"unlabeled-set", UNLABELED_SOURCE, "SOURCE", 0,
"How to select the unlabeled documents. Same format as --test-set. "
"Default is `0'."},
{"ignore-set", IGNORE_SOURCE, "SOURCE", 0,
"How to select the ignored documents. Same format as --test-set. Default is "
"`0'."},
{"validation-set", VALIDATION_SOURCE, "SOURCE", 0,
"How to select the validation documents. Same format as --test-set. Default is "
"`0'."},
{"test-percentage", 'p', "P", OPTION_HIDDEN,
"Use P percent of the indexed documents as test data. Default is 30."},
{"set-test-files", SET_TEST_FILES_KEY, "FILENAME", OPTION_HIDDEN,
"Instead of splitting the data among test/train randomly (using the "
"-p option), use the indexed files named in the contents of FILENAME "
"for testing, and all the others in the model for training. FILENAME "
"should contain a list of file paths (with path identical to the path "
"used in indexing), each path separated by a newline."},
{"testing-files", SET_TEST_FILES_KEY, "FILENAME",
OPTION_ALIAS | OPTION_HIDDEN},
{"set-files-use-basename", SET_TEST_FILES_USE_BASENAME_KEY, "N",
OPTION_ARG_OPTIONAL,
"When using files to specify doc types, compare only the last N "
"components the doc's pathname. That is use the filename and "
"the last N-1 directory names. If N is not specified, it defaults to 1."},
{"testing-files-use-basename", SET_TEST_FILES_USE_BASENAME_KEY, "N",
OPTION_ALIAS | OPTION_HIDDEN | OPTION_ARG_OPTIONAL},
{0,0}
};
static error_t
bow_split_parse_opt (int key, char *arg, struct argp_state *state)
{
bow_files_source_type *files_source;
float *fraction;
int *number;
char **filename;
bow_split_fancy_count **fancy_counts;
int length;
switch (key)
{
case TEST_SOURCE:
files_source = &bow_test_files_source;
fraction = &bow_test_fraction;
number = &bow_test_number;
filename = &bow_test_filename;
fancy_counts = &bow_test_fancy_counts;
break;
case TRAIN_SOURCE:
files_source = &bow_train_files_source;
fraction = &bow_train_fraction;
number = &bow_train_number;
filename = &bow_train_filename;
fancy_counts = &bow_train_fancy_counts;
break;
case UNLABELED_SOURCE:
files_source = &bow_unlabeled_files_source;
fraction = &bow_unlabeled_fraction;
number = &bow_unlabeled_number;
filename = &bow_unlabeled_filename;
fancy_counts = &bow_unlabeled_fancy_counts;
break;
case IGNORE_SOURCE:
files_source = &bow_ignore_files_source;
fraction = &bow_ignore_fraction;
number = &bow_ignore_number;
filename = &bow_ignore_filename;
fancy_counts = &bow_ignore_fancy_counts;
break;
case VALIDATION_SOURCE:
files_source = &bow_validation_files_source;
fraction = &bow_validation_fraction;
number = &bow_validation_number;
filename = &bow_validation_filename;
fancy_counts = &bow_validation_fancy_counts;
break;
case 'p':
bow_test_files_source = bow_files_source_fraction;
bow_test_fraction = atof (arg) / 100.0;
return 0;
break;
case SET_TEST_FILES_KEY:
bow_test_files_source = bow_files_source_file;
bow_test_filename = arg;
return 0;
break;
case SET_TEST_FILES_USE_BASENAME_KEY:
if (arg)
bow_test_set_files_use_basename = atoi (arg);
else
bow_test_set_files_use_basename = 1;
return 0;
break;
default:
return ARGP_ERR_UNKNOWN;
}
assert (key == TEST_SOURCE || key == TRAIN_SOURCE ||
key == UNLABELED_SOURCE || key == IGNORE_SOURCE ||
key == VALIDATION_SOURCE);
length = strlen(arg);
/* Now parse the split option */
if (!strcmp(arg, "remaining"))
*files_source = bow_files_source_remaining;
else if (length == strspn(arg, "0123456789"))
{
*files_source = bow_files_source_number;
*number = atoi(arg);
}
else if (length == strspn(arg, ".0123456789") &&
(strchr(arg, '.') == strrchr(arg, '.')))
{
*files_source = bow_files_source_fraction;
*fraction = atof(arg);
assert (*fraction >= 0 && *fraction <= 1);
}
else if (length == strspn(arg, "0123456789r")
&& length > 1
&& strchr(arg, 'r') == arg + length - 1)
{
*files_source = bow_files_source_number_remaining;
*number = atoi(arg);
}
else if (length > 2 &&
strchr(arg, 'r') == arg + length - 1 &&
strspn(arg, ".0123456789r"))
{
char buf[length];
*files_source = bow_files_source_fraction_remaining;
memcpy (buf, arg, length-1);
buf[length-1] = '\0';
*fraction = atof(buf);
}
else if (length == strspn(arg, "0123456789t")
&& length > 1
&& strchr(arg, 't') == arg + length - 1)
{
*files_source = bow_files_source_number_train;
*number = atoi(arg);
}
else if (length > 2 &&
strchr(arg, 't') == arg + length - 1 &&
strspn(arg, ".0123456789t"))
{
char buf[length];
*files_source = bow_files_source_fraction_train;
memcpy (buf, arg, length-1);
buf[length-1] = '\0';
*fraction = atof(buf);
}
else if (length > 2 &&
strchr(arg, 'p') == arg + length - 2 &&
strchr(arg, 'c') == arg + length - 1 &&
strspn(arg, "0123456789pc"))
{
*files_source = bow_files_source_num_per_class;
*number = atoi(arg);
}
else if (length > 2 &&
strchr(arg, 'p') == arg + length - 3 &&
strchr(arg, 'c') == arg + length - 2 &&
strchr(arg, 'r') == arg + length - 1 &&
strspn(arg, "0123456789pcr"))
{
bow_error ("`pcr' not yet supported");
*files_source = bow_files_source_num_per_class_remaining;
*number = atoi(arg);
}
else if (length > 2 &&
arg[0] == '[' && arg[length-1] == ']')
{
char *charp;
int num_entries;
int x;
*files_source = bow_files_source_fancy_counts;
/* see how many classes we'll need to malloc for */
for (charp=arg, num_entries = 0; *charp != '\0'; charp++)
{
if (*charp == ',')
num_entries++;
}
num_entries = (num_entries + 1) / 2;
/* malloc and initialize the space to store the counts */
assert (num_entries > 0);
*fancy_counts = malloc (sizeof (bow_split_fancy_count) * (num_entries + 1));
(*fancy_counts)[num_entries].class_name = NULL;
/* extract the class num arg pairs */
arg++;
for (charp = strtok(arg, ","), x=0; x < num_entries;
x++, charp = strtok(NULL, ","))
{
(*fancy_counts)[x].class_name = charp;
(*fancy_counts)[x].num_docs = atoi(strtok(NULL, ","));
}
assert(NULL == strtok(NULL, ","));
}
else
{
*files_source = bow_files_source_file;
*filename = arg;
}
return 0;
}
static const struct argp bow_split_argp =
{
bow_split_options,
bow_split_parse_opt
};
static struct argp_child bow_split_argp_child =
{
&bow_split_argp, /* This child's argp structure */
0, /* flags for child */
0, /* optional header in help message */
0 /* arbitrary group number for ordering */
};
/* Mark all documents in the array DOCS to be of type TAG. */
void
bow_tag_docs (bow_array *docs, int tag)
{
int i;
bow_cdoc *doc;
for (i = 0; i < docs->length ; i++)
{
doc = bow_array_entry_at_index (docs, i);
doc->type = tag;
}
}
/* Change documents in the array DOCS of type TAG1 to be of type
TAG2. Returns the number of tags changed. */
int
bow_tag_change_tags (bow_array *docs, int tag1, int tag2)
{
int i;
bow_cdoc *doc;
int changed = 0;
for (i = 0; i < docs->length ; i++)
{
doc = bow_array_entry_at_index (docs, i);
if (doc->type == tag1) {
doc->type = tag2;
changed++;
}
}
return changed;
}
/* Mark all documents in the array DOCS to be of type BOW_DOC_UNTAGGED. */
void
bow_set_all_docs_untagged (bow_array *docs)
{
int i;
bow_cdoc *doc;
for (i = 0; i < docs->length ; i++)
{
doc = bow_array_entry_at_index (docs, i);
doc->type = bow_doc_untagged;
}
}
/* Randomly select some SOURCE_TAG documents and label them with tag
indicated by TAG. The number of documents from each class are
determined by the array NUM_PER_CLASS. */
void
bow_set_doc_types_randomly_by_count_per_class (bow_array *docs,
int num_classes,
bow_int4str *classnames,
int *num_per_class, int tag,
int source_tag)
{
int ci, di;
bow_cdoc *cdoc = NULL;
/* All the below include only the test/model docs, not the ignore docs.*/
int *num_untagged_per_class;
int *local_num_per_class;
int total_num_to_tag;
int num_tagged;
int num_loops;
char *type_name = NULL;
/* Seed the random number generator if it hasn't been already */
bow_random_set_seed ();
/* Count the number of untagged documents in each class, and if
this function is trying to tag more than are available, simply
have this function tag less */
num_untagged_per_class = alloca (num_classes * sizeof (int));
for (ci = 0; ci < num_classes; ci++)
num_untagged_per_class[ci] = 0;
for (di = 0; di < docs->length; di++)
{
cdoc = bow_array_entry_at_index (docs, di);
if (cdoc->type == bow_doc_untagged)
num_untagged_per_class[cdoc->class]++;
}
for (ci = 0; ci < num_classes; ci++)
if (num_per_class[ci] > num_untagged_per_class[ci])
{
bow_verbosify (bow_quiet, "Asked for %d documents of class %s; "
"only %d available\n",
num_per_class[ci],
bow_int2str (classnames, ci),
num_untagged_per_class[ci]);
num_per_class[ci] = num_untagged_per_class[ci];
}
/* Create a local array of the number of taggings to perform in each class,
which we will change by decrementing it as we tag. */
local_num_per_class = alloca (num_classes * sizeof (int));
total_num_to_tag = 0;
for (ci = 0; ci < num_classes; ci++)
{
local_num_per_class[ci] = num_per_class[ci];
total_num_to_tag += num_per_class[ci];
}
if (total_num_to_tag == 0) return;
#if 0
/* Print the number of documents in each class. */
fprintf (stderr, "Number of docs per class: ");
for (i = 0; i < max_ci; i++)
fprintf (stderr, "%d:%d ",
num_docs_per_class[i],
num_test_docs_allowed_per_class[i]);
fprintf (stderr, "\n");
#endif
/* Now loop until we have tagged a set of size num_test */
for (num_tagged = 0, num_loops = 0; num_tagged < total_num_to_tag;
num_loops++)
{
di = random() % docs->length;
cdoc = bow_array_entry_at_index (docs, di);
assert (cdoc);
if (cdoc->type == source_tag
&& local_num_per_class[cdoc->class] > 0)
{
cdoc->type = tag;
num_tagged++;
local_num_per_class[cdoc->class]--;
assert (local_num_per_class[cdoc->class] >= 0);
}
if (num_loops > docs->length * 1000)
bow_error ("Random number generator could not find enough "
"model document indices with balanced classes");
}
switch (tag)
{
case bow_doc_train:
type_name = "train";
break;
case bow_doc_test:
type_name = "test";
break;
case bow_doc_unlabeled:
type_name = "unlabeled";
break;
case bow_doc_ignore:
type_name = "ignore";
break;
case bow_doc_validation:
type_name = "validation";
break;
default:
bow_error ("No implementation for this type.");
}
bow_verbosify (bow_progress,
"Randomly selected %d documents for the %s set:\n",
total_num_to_tag, type_name);
for (ci = 0; ci < num_classes; ci++)
bow_verbosify (bow_progress, " %5d : %s\n", num_per_class[ci],
bow_int2str (classnames, ci));
}
/* Randomly select NUM untagged documents and label them with tag
indicated by TAG. If TAKE_PROPORTION_FROM_REMAINING is non-zero,
then the number of documents from each class are determined by
attempting to match the proportion of classes among the so-far
untagged documents; otherwise, it attempts to match the proportion
of the non-ignore documents. */
void
bow_set_doc_types_randomly_by_count (bow_array *docs, int num_classes,
bow_int4str *classnames,
int num, int tag,
int take_proportion_from_remaining,
int source_tag)
{
int ci, di;
bow_cdoc *cdoc;
int *num_per_class = alloca (num_classes * sizeof (int));
int *num_docs_per_class = alloca (num_classes * sizeof (int));
int total_num_docs = 0;
int total;
if (num == 0) return;
/* Find out the number of documents in each class. */
for (ci = 0; ci < num_classes; ci++)
num_docs_per_class[ci] = 0;
for (di = 0; di < docs->length ; di++)
{
cdoc = bow_array_entry_at_index (docs, di);
if (cdoc->type == bow_doc_ignore
|| (take_proportion_from_remaining
&& cdoc->type != bow_doc_untagged))
continue;
assert (cdoc->class < num_classes);
num_docs_per_class[cdoc->class]++;
total_num_docs++;
}
/* Initialize the array NUM_PER_CLASS, indicating how many documents
per class should be tagged. */
total = 0;
for (ci = 0; ci < num_classes; ci++)
{
num_per_class[ci] = ((float) num / (float) total_num_docs) *
(float) num_docs_per_class[ci];
/* Note that NUM_PER_CLASS[CI] may be zero here. Don't just
arbitrarily set it zero to 1, because NUM_DOCS_PER_CLASS[CI]
may also be zero. */
total += num_per_class[ci];
}
assert (total <= num);
/* Add more to take care of round-off error. */
for (ci = 0; total < num; ci = (ci+1) % docs->length)
{
if (num_per_class[ci] < num_docs_per_class[ci])
{
num_per_class[ci]++;
total++;
}
}
/* Do it. */
bow_set_doc_types_randomly_by_count_per_class (docs, num_classes, classnames,
num_per_class, tag, source_tag);
}
/* Randomly select a FRACTION of the untagged documents and label them
with tag indicated by TYPE. The number of documents from each
class are determined by attempting to match the proportion of
classes among the untagged documents. */
void
bow_set_doc_types_randomly_by_fraction_remaining (bow_array *docs,
int num_classes,
bow_int4str *classnames,
double fraction, int type)
{
int di, untagged_doc_count = 0;
bow_cdoc *cdoc;
assert (fraction <= 1.0);
for (di = 0; di < docs->length ; di++)
{
cdoc = bow_array_entry_at_index (docs, di);
if (cdoc->type == bow_doc_untagged)
untagged_doc_count++;
}
bow_set_doc_types_randomly_by_count (docs, num_classes, classnames,
fraction * untagged_doc_count,
type, 1, bow_doc_untagged);
}
/* Randomly select a FRACTION of the non-ignore documents and label
them with tag indicated by TYPE. The number of documents from each
class are determined by attempting to match the proportion of
classes among the untagged documents. */
void
bow_set_doc_types_randomly_by_fraction (bow_array *docs,
int num_classes,
bow_int4str *classnames,
double fraction, int type,
int source_tag)
{
int di, non_ignore_doc_count = 0;
bow_cdoc *cdoc;
for (di = 0; di < docs->length ; di++)
{
cdoc = bow_array_entry_at_index (docs, di);
if (cdoc->type != bow_doc_ignore)
non_ignore_doc_count++;
}
bow_set_doc_types_randomly_by_count (docs, num_classes, classnames,
fraction * non_ignore_doc_count,
type, 0, source_tag);
}
/* Setting file tags with lists of filenames. */
/* If opts.c:bow_test_set_files_use_basename is non-zero, ignore the
directory names in the filenames read from TEST_FILES_FILENAMES in
bow_test_set_file(). */
static inline const char *
bow_basename (const char *str, int num_components)
{
int i;
if (num_components == 0)
return str;
i = strlen (str) - 1;
assert (str[i] != '/');
while (i > 0)
{
if (str[i] == '/')
{
num_components--;
if (num_components == 0)
break;
}
i--;
}
if (str[i] == '/')
i++;
return &(str[i]);
}
/* Set all the cdoc's named in TEST_FILES_FILENAME to type indicated
by TYPE. Raises error if any of the files already have a
non-"untagged" type. BARREL should be a doc barrel, not a class
barrel. */
void
bow_set_docs_to_type (bow_array *docs,
const char *test_files_filename,
int type)
{
bow_int4str *map;
bow_cdoc *cdoc;
int di;
int files_count = 0;
const char *filename;
char *type_name = NULL;
map = bow_int4str_new_from_string_file (test_files_filename);
if (bow_test_set_files_use_basename)
{
/* Convert the filename strings in map to only the basenames of
the files. */
int si, index;
bow_int4str *map2 = bow_int4str_new (0);
for (si = 0; si < map->str_array_length; si++)
{
index =
bow_str2int_no_add
(map2, bow_basename(bow_int2str (map, si),
bow_test_set_files_use_basename));
if (index != -1)
bow_verbosify (bow_quiet, "WARNING: Repeated file basename `%s'\n",
bow_int2str (map, si));
bow_str2int (map2, bow_basename (bow_int2str (map, si),
bow_test_set_files_use_basename));
}
bow_int4str_free (map);
map = map2;
}
for (di = 0; di < docs->length; di++)
{
cdoc = bow_array_entry_at_index (docs, di);
if (bow_test_set_files_use_basename)
filename = bow_basename (cdoc->filename,
bow_test_set_files_use_basename);
else
filename = cdoc->filename;
if (bow_str2int_no_add (map, filename) != -1)
{
/* This filename is in the map; tag this cdoc. */
if (cdoc->type != bow_doc_untagged)
bow_verbosify (bow_quiet, "Duplicate tags requested for %s. "
"Using first tag.\n", filename);
else
{
cdoc->type = type;
files_count++;
}
}
}
switch (type)
{
case bow_doc_train:
type_name = "train";
break;
case bow_doc_test:
type_name = "test";
break;
case bow_doc_unlabeled:
type_name = "unlabeled";
break;
case bow_doc_ignore:
type_name = "ignore";
break;
case bow_doc_validation:
type_name = "validation";
break;
default:
bow_error ("No implementation for this type.");
}
bow_verbosify (bow_progress,
"Using %s, placed %d documents in the %s set\n",
test_files_filename, files_count,
type_name);
bow_int4str_free (map);
return;
}
/* Postprocess the tags on documents by setting untagged documents to
train or test, depending on context. */
void
bow_set_doc_types_of_remaining (bow_array *docs, int type)
{
int di;
bow_cdoc *cdoc;
char *type_name = NULL;
int num_found = 0;
for (di = 0; di < docs->length; di++)
{
cdoc = bow_array_entry_at_index (docs, di);
if (cdoc->type == bow_doc_untagged)
{
cdoc->type = type;
num_found++;
}
}
switch (type)
{
case bow_doc_train:
type_name = "train";
break;
case bow_doc_test:
type_name = "test";
break;
case bow_doc_unlabeled:
type_name = "unlabeled";
break;
case bow_doc_ignore:
type_name = "ignore";
break;
case bow_doc_validation:
type_name = "validation";
break;
default:
bow_error ("No implementation for this type.");
}
bow_verbosify (bow_progress, "Placed remaining %d documents in the %s set:\n",
num_found, type_name);
}
/* Use the command line arguments to create the appropriate train/test split */
void
bow_set_doc_types (bow_array *docs, int num_classes, bow_int4str *classnames)
{
/* int num_docs; */
int ti;
int num_types;
int num_remaining = 0;
/* note it is important that ignore comes first, so we can
ignore them when doing even prior random splits later */
struct {
bow_files_source_type source;
float fraction;
int number;
char *filename;
bow_split_fancy_count *fancy_counts;
bow_files_source_type doc_type;
} types[] = {{bow_ignore_files_source,
bow_ignore_fraction,
bow_ignore_number,
bow_ignore_filename,
bow_ignore_fancy_counts,
bow_doc_ignore},
{bow_test_files_source,
bow_test_fraction,
bow_test_number,
bow_test_filename,
bow_test_fancy_counts,
bow_doc_test},
{bow_train_files_source,
bow_train_fraction,
bow_train_number,
bow_train_filename,
bow_train_fancy_counts,
bow_doc_train},
{bow_unlabeled_files_source,
bow_unlabeled_fraction,
bow_unlabeled_number,
bow_unlabeled_filename,
bow_unlabeled_fancy_counts,
bow_doc_unlabeled},
{bow_validation_files_source,
bow_validation_fraction,
bow_validation_number,
bow_validation_filename,
bow_validation_fancy_counts,
bow_doc_validation},
{0,0,0,0,0,0}};
/* First set all files to be untagged. */
bow_set_all_docs_untagged (docs);
/* count the number of document types */
for (num_types = 0; types[num_types].source; num_types++);
/* First, set document types based on input files */
for (ti = 0; ti < num_types; ti++)
{
if (types[ti].source == bow_files_source_file)
bow_set_docs_to_type (docs,
types[ti].filename,
types[ti].doc_type);
}
/* Second, set document types based on specific numbers per class */
for (ti = 0; ti < num_types; ti++)
{
if (types[ti].source == bow_files_source_num_per_class)
{
int ci;
int *class_nums;
class_nums = bow_malloc (sizeof (int) * num_classes);
for (ci = 0; ci < num_classes; ci ++)
class_nums[ci] = types[ti].number;
bow_set_doc_types_randomly_by_count_per_class (docs, num_classes,
classnames,
class_nums,
types[ti].doc_type,
bow_doc_untagged);
bow_free(class_nums);
}
if (types[ti].source == bow_files_source_num_per_class_remaining)
{
int ci;
int *class_nums;
bow_error ("prc suffix not yet implemented.");
class_nums = bow_malloc (sizeof (int) * num_classes);
for (ci = 0; ci < num_classes; ci ++)
class_nums[ci] = types[ti].number;
bow_set_doc_types_randomly_by_count_per_class (docs, num_classes,
classnames,
class_nums,
types[ti].doc_type,
bow_doc_untagged);
bow_free(class_nums);
}
else if (types[ti].source == bow_files_source_fancy_counts)
{
int *counts = bow_malloc (sizeof (int) * num_classes);
int ci;
bow_split_fancy_count *class_count;
assert (classnames);
for (ci = 0; ci < num_classes; ci++)
counts[ci] = -1;
for (class_count = types[ti].fancy_counts;
class_count->class_name;
class_count++)
{
int class = -1;
for (ci = 0; ci < num_classes; ci++)
{
const char *name = bow_int2str (classnames, ci);
if (!strcmp(class_count->class_name, name))
{
class = ci;
break;
}
}
if (class == -1)
bow_error ("Unknown class %s.\n", class_count->class_name);
counts[class] = class_count->num_docs;
}
for (ci = 0; ci < num_classes; ci++)
if (counts[ci] == -1)
bow_error("Under-specified class counts");
bow_set_doc_types_randomly_by_count_per_class (docs, num_classes,
classnames,
counts,
types[ti].doc_type,
bow_doc_untagged);
bow_free(counts);
}
}
/* Third, do any random class-proportioned splits to set
document types */
for (ti = 0; ti < num_types; ti++)
{
if (types[ti].source == bow_files_source_fraction)
{
bow_set_doc_types_randomly_by_fraction
(docs, num_classes, classnames, types[ti].fraction,
types[ti].doc_type, bow_doc_untagged);
}
else if (types[ti].source == bow_files_source_fraction_remaining)
{
bow_set_doc_types_randomly_by_fraction_remaining
(docs, num_classes, classnames, types[ti].fraction,
types[ti].doc_type);
}
else if (types[ti].source == bow_files_source_number)
{
bow_set_doc_types_randomly_by_count (docs, num_classes, classnames,
types[ti].number,
types[ti].doc_type, 0,
bow_doc_untagged);
}
else if (types[ti].source == bow_files_source_number_remaining)
{
bow_set_doc_types_randomly_by_count (docs, num_classes, classnames,
types[ti].number,
types[ti].doc_type, 1,
bow_doc_untagged);
}
}
/* Set remaining untagged docs if appropriate */