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bibliography.bib
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@article{everhart2008life,
title={Life history strategies of corticolous myxomycetes: the life cycle, plasmodial types, fruiting bodies, and taxonomic orders},
author={Everhart, Sydney E and Keller, Harold W},
journal={Fungal Diversity},
volume={29},
number={1},
pages={1--16},
year={2008}
}
@article{everhart2008influence,
title={Influence of bark pH on the occurrence and distribution of tree canopy myxomycete species},
author={Everhart, Sydney E and Keller, Harold W and Ely, Joseph S},
journal={Mycologia},
volume={100},
number={2},
pages={191--204},
year={2008},
publisher={Taylor \& Francis}
}
@article{kilgore2008tree,
title={Tree canopy research and student experiences using the doubled rope climbing method},
author={Kilgore, Courtney M and Keller, Harold W and Everhart, Sydney E and Scarborough, Angela R and Snell, Kenneth L and Skrabal, Melissa S and Pottorff, Charly and Ely, Joseph S},
journal={Journal of the Botanical Research Institute of Texas},
pages={1309--1336},
year={2008},
publisher={Botanical Research Institute of Texas}
}
@article{keller2008myxomycete,
title={Myxomycete plasmodia and fruiting bodies: unusual occurrences and user-friendly study techniques},
author={Keller, Harold W and Kilgore, Courtney M and Everhart, Sydney E and Carmack, Glenda J and Crabtree, Christopher D and Scarborough, Angela R},
journal={Fungi},
volume={1},
number={1},
pages={24--37},
year={2008}
}
@article{everhart2009evaluation,
title={Evaluation of tree canopy epiphytes and bark characteristics associated with the presence of corticolous myxomycetes},
author={Everhart, Sydney E Everhart and Ely, Joseph S Ely and Keller, Harold W Keller},
journal={Botany},
volume={87},
number={5},
pages={509--517},
year={2009}
}
@article{keller2010importance,
title={Importance of Myxomycetes in biological research and teaching},
author={Keller, Harold W and Everhart, Sydney E},
journal={Fungi},
volume={3},
pages={13--27},
year={2010}
}
@article{everhart2011characterization,
title={Characterization of three-dimensional spatial aggregation and association patterns of brown rot symptoms within intensively mapped sour cherry trees},
author={Everhart, Sydney E and Askew, Ashley and Seymour, Lynne and Holb, Imre J and Scherm, Harald},
journal={Annals of botany},
volume={108},
number={6},
pages={1195--1202},
year={2011},
publisher={Oxford University Press}
}
@article{keller2008myxomycete,
title={Myxomycete species concepts, monotypic genera, the fossil record, and additional examples of good taxonomic practice},
author={Keller, Harold W and Everhart, Sydney E},
journal={Rev Mex Micol},
volume={27},
pages={9--19},
year={2008}
}
@article{everhart2010upper,
title={Upper canopy collection and identification of grapevines (Vitis) from selected forests in the Southeastern United States},
author={Everhart, Sydney E},
journal={Castanea},
volume={75},
number={1},
pages={141--149},
year={2010},
publisher={Southern Appalachian Botanical Society}
}
@article{everhart2013spatio,
title={Spatio-temporal patterns of pre-harvest brown rot epidemics within individual peach tree canopies},
author={Everhart, SE and Askew, A and Seymour, L and Scherm, H},
journal={European Journal of Plant Pathology},
volume={135},
pages={499--509},
year={2013},
publisher={Springer Netherlands}
}
@article{everhart2012spatial,
title={Spatial patterns of brown rot epidemics and development of microsatellite markers for analyzing fine-scale genetic structure of Monilinia fructicola populations within peach tree canopies},
author={Everhart, Sydney and Askew, Ashley and Seymour, Lynne and Glenn, Travis and Scherm, Harald},
journal={Plant Health Progress},
number={Online.},
pages={doi--10},
year={2012}
}
@article{keller2009tree,
title={Tree canopy biodiversity in temperate forests: Exploring islands in the sky},
author={Keller, Harold W and Everhart, Sydney E and Skrabal, Melissa and Kilgore, Courtney M},
journal={Southeastern Biology},
volume={56},
number={1},
pages={52--74},
year={2009}
}
@inproceedings{everhart2012fine,
title={Fine-scale genetic structure of Monilinia fructicola populations within peach tree canopies},
author={Everhart, SE and Scherm, H},
booktitle={PHYTOPATHOLOGY},
volume={102},
number={7},
pages={36--36},
year={2012},
organization={AMER PHYTOPATHOLOGICAL SOC 3340 PILOT KNOB ROAD, ST PAUL, MN 55121 USA}
}
@article{everhartearly,
title={Early detection of P. ramorum lineages in Oregon forests using genetic markers},
author={Everhart, Sydney E and Larsen, Meredith M and Kanaskie, Alan and Gr{\"u}nwald, Niklaus J}
}
@incollection{everhart2014phytophthora,
title={Phytophthora ramorum},
author={Everhart, Sydney E and Tabima, Javier F and Gr{\"u}nwald, Niklaus J},
booktitle={Genomics of plant-associated fungi and oomycetes: Dicot pathogens},
pages={159--174},
year={2014},
publisher={Springer Berlin Heidelberg}
}
@article{everhart2015fine,
title={Fine-scale genetic structure of Monilinia fructicola during brown rot epidemics within individual peach tree canopies},
author={Everhart, Sydney E and Scherm, Harald},
journal={Phytopathology},
volume={105},
number={4},
pages={542--549},
year={2015}
}
@article{de2015effect,
title={Effect of Y-trellis and vertical shoot positioning training systems on downy mildew and botrytis bunch rot of grape in highlands of southern Brazil},
author={de Bem, Betina Pereira and Bogo, Amauri and Everhart, Sydney and Casa, Ricardo Trezzi and Gon{\c{c}}alves, Mayra Juline and Marcon Filho, Jos{\'e} Luiz and da Cunha, Isabel Cristina},
journal={Scientia Horticulturae},
volume={185},
pages={162--166},
year={2015},
publisher={Elsevier}
}
@article{schnabel2014studies,
title={Studies on sensitivity reduction in solo and mixture treatments and fungicide-induced mutagenesis in Monilinia fructicola},
author={Schnabel, Guido and Chen, F and Everhart, Sydney E and Bridges, WC and Liu, X},
year={2014}
}
@article{chen2015fungicide,
title={Fungicide-induced transposon movement in Monilinia fructicola},
author={Chen, Fengping and Everhart, Sydney E and Bryson, P Karen and Luo, Chaoxi and Song, Xi and Liu, Xili and Schnabel, Guido},
journal={Fungal Genetics and Biology},
volume={85},
pages={38--44},
year={2015},
publisher={Academic Press}
}
@article{kamvar2017package,
title={Package ‘poppr’},
author={Kamvar, Zhian N and Tabima, Javier F and Everhart, Sydney E and Brooks, Jonah C and Krueger-Hadfield, Stacy A and Sotka, Erik and Knaus, Brian J and Grunwald, Niklaus J},
year={2017}
}
@article{tabima2016microbe,
title={Microbe-ID: an open source toolbox for microbial genotyping and species identification},
author={Tabima, Javier F and Everhart, Sydney E and Larsen, Meredith M and Weisberg, Alexandra J and Kamvar, Zhian N and Tancos, Matthew A and Smart, Christine D and Chang, Jeff H and Gr{\"u}nwald, Niklaus J},
journal={PeerJ},
volume={4},
pages={e2279},
year={2016},
publisher={PeerJ Inc.}
}
@article{grunwald2015population,
title={Population Genetics in R.},
author={Gr{\"u}nwald, Niklaus J and Kamvar, Zhian N and Everhart, Sydney E},
year={2015}
}
@article{everhart2016plpt,
title={PLPT 496/892: Disease Dynamics \& Evolution—A Peer Review of Teaching Project Benchmark Portfolio},
author={Everhart, Sydney E},
year={2016}
}
@article{dowling2016effect,
title={Effect of fungicide applications on Monilinia fructicola population diversity and transposon movement},
author={Dowling, Madeline E and Bryson, Patricia K and Boatwright, Harriet G and Wilson, Jennifer R and Fan, Zhen and Everhart, Sydney E and Brannen, Phillip M and Schnabel, Guido},
journal={Phytopathology},
volume={106},
number={12},
pages={1504--1512},
year={2016}
}
@inproceedings{everhart2010characterization,
title={Characterization of 3-D spatial aggregation patterns of brown rot symptoms within intensively mapped fruit trees},
author={Everhart, Sydney E and Askew, Ashley and Seymour, Lynne and Holb, Imre J and Scherm, Harald},
booktitle={6 th International Workshop on Functional-Structural Plant Models},
volume={35},
number={9\&10},
pages={56},
year={2010}
}
@article{betina2016effect,
title={Effect of four training systems on the temporal dynamics of downy mildew in two grapevine cultivars in southern Brazil},
author={Betina, P and Bogo, Amauri and Everhart, Sydney E and Casa, Ricardo T and Gon{\c{c}}alves, Mayra J and Marcon Filho, Jos{\'e} L and Rufato, Leo and da Silva, Fabio N and Allebrandt, Ricardo and da Cunha, Isabel C},
journal={Tropical Plant Pathology},
volume={41},
number={6},
pages={370--379},
year={2016},
publisher={Springer International Publishing}
}
@article{amaradasa2016effects,
title={Effects of sublethal fungicides on mutation rates and genomic variation in fungal plant pathogen, Sclerotinia sclerotiorum},
author={Amaradasa, B Sajeewa and Everhart, Sydney E},
journal={PloS one},
volume={11},
number={12},
pages={e0168079},
year={2016},
publisher={Public Library of Science}
}
@article{amaradasa2016effects,
title={Effects of Sublethal Fungicides on Mutation Rates and Genomic Variation in Fungal Plant Pathogen, Sclerotinia sclerotiorum},
author={Amaradasa, B Sajeewa and Everhart, Sydney E},
year={2016}
}
@article{miorini2017control,
title={Control of white mold of dry bean and residual activity of fungicides applied by chemigation},
author={Miorini, Thomas JJ and Raetano, Carlos G and Everhart, Sydney E},
journal={Crop Protection},
volume={94},
pages={192--202},
year={2017},
publisher={Elsevier}
}
@article{dowling2017novel,
title={Novel gene-sequence markers for isolate tracking within Monilinia fructicola lesions},
author={Dowling, Madeline E and Schnabel, Guido and Boatwright, Harriet G and Everhart, Sydney E},
journal={Pest Management Science},
year={2017},
publisher={John Wiley \& Sons, Ltd}
}
@article{grunwald2017best,
title={Best practices for population genetic analyses},
author={Gr{\"u}nwald, Niklaus J and Everhart, Sydney and Knaus, Brian J and Kamvar, Zhian N},
journal={Phytopathology},
number={ja},
year={2017}
}
@article{dugan2016cryptic,
title={Cryptic species: a leitmotif of contemporary mycology has challenges and benefits for plant pathologists.},
author={Dugan, FM and Everhart, S and others},
journal={Plant Health Progress},
number={December},
year={2016},
publisher={Plant Management Network}
}
@article{kamvar2017population,
title={Population structure and phenotypic variation of Sclerotinia sclerotiorum from dry bean in the United States},
author={Kamvar, Zhian N and Amaradasa, Bimal S and Jhala, Rachana and McCoy, Serena and Steadman, James R and Everhart, Sydney E},
journal={PeerJ PrePrints},
year={2017},
publisher={PeerJ, Inc.}
}
@article{miorini2017phenotypic,
title={PHENOTYPIC AND GENOTYPIC CHARACTERIZATION OF RELEVANT Sclerotinia sclerotiorum ISOLATES},
author={Miorini, Thomas JJ and Pannullo, Anthony G and Hornby, T and Higgins, RB and Everhart, Sydney E and Steadman, James R},
year={2017}
}
@article{everhart2016population,
title={Population structure and fungicide sensitivity of 366 Sclerotinia sclerotiorum isolates from common beans},
author={Everhart, SE and Amaradasa, BS and Jhala, R and Higgins, R and Steadman, JR},
journal={Annu Rep Bean Improv Coop},
volume={59},
pages={131--132},
year={2016}
}
@incollection{keller2017myxomycetes,
title={The Myxomycetes: Introduction, Basic Biology, Life Cycles, Genetics, and Reproduction},
author={Keller, Harold W and Everhart, Sydney E and Kilgore, Courtney M},
booktitle={Myxomycetes},
pages={1--40},
year={2017}
}