From 3a7f8890451e02fb852af81c359b39e249e523d3 Mon Sep 17 00:00:00 2001 From: Mikhail Beck Date: Thu, 18 Jul 2024 11:47:18 +0100 Subject: [PATCH] #123 Added Ibis connection (#124) * #123 Added Ibis connection * #123 Removed Python 3.9 * #123 Changed for ubuntu 22.04 in tests --- .github/workflows/checks.yml | 6 +- doc/changes/unreleased.md | 2 +- exasol/nb_connector/connections.py | 81 +- poetry.lock | 1258 ++++++++++------- pyproject.toml | 3 +- .../test_itde_manager_in_docker_container.py | 2 +- test/unit/test_connections.py | 13 + 7 files changed, 798 insertions(+), 567 deletions(-) diff --git a/.github/workflows/checks.yml b/.github/workflows/checks.yml index 1b9941c..ff01462 100644 --- a/.github/workflows/checks.yml +++ b/.github/workflows/checks.yml @@ -43,7 +43,7 @@ jobs: strategy: fail-fast: false matrix: - python-version: ["3.9", "3.10", "3.11"] + python-version: ["3.10", "3.11"] steps: - name: SCM Checkout @@ -70,7 +70,7 @@ jobs: strategy: fail-fast: false matrix: - python-version: ["3.9", "3.10", "3.11"] + python-version: ["3.10", "3.11"] steps: - name: SCM Checkout @@ -91,7 +91,7 @@ jobs: strategy: fail-fast: false matrix: - python-version: ["3.9", "3.10", "3.11"] + python-version: ["3.10", "3.11"] exasol-version: ["7.1.9"] steps: diff --git a/doc/changes/unreleased.md b/doc/changes/unreleased.md index 2e7dcb4..a30de10 100644 --- a/doc/changes/unreleased.md +++ b/doc/changes/unreleased.md @@ -8,4 +8,4 @@ * #110 Added the support of SaaS to the extension wrappers. - Added SaaS configuration parameters in a call to the language container deployer. - Changed how the bucketfs parameters are stored in a connection object. - +* #123 Added a function that opens a connection to Ibis. diff --git a/exasol/nb_connector/connections.py b/exasol/nb_connector/connections.py index 0e131d4..78ba7bb 100644 --- a/exasol/nb_connector/connections.py +++ b/exasol/nb_connector/connections.py @@ -9,6 +9,7 @@ import pyexasol # type: ignore import sqlalchemy # type: ignore from sqlalchemy.engine.url import URL # type: ignore +import ibis # type: ignore import exasol.bucketfs as bfs # type: ignore import exasol.saas.client.api_access as saas_api # type: ignore @@ -101,6 +102,34 @@ def get_saas_database_id(conf: Secrets) -> str: database_name=conf.get(CKey.saas_database_name)) +def _get_pyexasol_connection_params(conf: Secrets, **kwargs) -> dict[str, Any]: + + if get_backend(conf) == StorageBackend.onprem: + conn_params: dict[str, Any] = { + "dsn": get_external_host(conf), + "user": conf.get(CKey.db_user), + "password": conf.get(CKey.db_password), + } + else: + conn_params = saas_api.get_connection_params( + host=conf.get(CKey.saas_url), + account_id=conf.get(CKey.saas_account_id), + pat=conf.get(CKey.saas_token), + database_id=conf.get(CKey.saas_database_id), + database_name=conf.get(CKey.saas_database_name) + ) + + encryption = _optional_encryption(conf) + if encryption is not None: + conn_params["encryption"] = encryption + ssopt = _extract_ssl_options(conf) + if ssopt: + conn_params["websocket_sslopt"] = ssopt + + conn_params.update(kwargs) + return conn_params + + def open_pyexasol_connection(conf: Secrets, **kwargs) -> pyexasol.ExaConnection: """ Opens a pyexasol connection using provided configuration parameters. @@ -127,30 +156,7 @@ def open_pyexasol_connection(conf: Secrets, **kwargs) -> pyexasol.ExaConnection: For other optional parameters the default settings are as per the pyexasol interface. """ - if get_backend(conf) == StorageBackend.onprem: - conn_params: dict[str, Any] = { - "dsn": get_external_host(conf), - "user": conf.get(CKey.db_user), - "password": conf.get(CKey.db_password), - } - else: - conn_params = saas_api.get_connection_params( - host=conf.get(CKey.saas_url), - account_id=conf.get(CKey.saas_account_id), - pat=conf.get(CKey.saas_token), - database_id=conf.get(CKey.saas_database_id), - database_name=conf.get(CKey.saas_database_name) - ) - - encryption = _optional_encryption(conf) - if encryption is not None: - conn_params["encryption"] = encryption - ssopt = _extract_ssl_options(conf) - if ssopt: - conn_params["websocket_sslopt"] = ssopt - - conn_params.update(kwargs) - + conn_params = _get_pyexasol_connection_params(conf, **kwargs) return pyexasol.connect(**conn_params) @@ -270,3 +276,30 @@ def open_bucketfs_connection(conf: Secrets) -> bfs.BucketLike: account_id=saas_account_id, database_id=saas_database_id, pat=saas_token) + + +def open_ibis_connection(conf: Secrets, **kwargs): + """ + Creates a connection to Ibis with Exasol backend. + + The parameters are similar to those of open_pyexasol_connection function. + The downstream call signature is also similar to pyexasol, except that the dsn is + provided in two separate parts - host and port. + + Unlike open_pyexasol_connection, this function sets the default schema if it's + defined in the configuration. + """ + + conn_params = _get_pyexasol_connection_params(conf, **kwargs) + + dsn = conn_params.pop('dsn') + host_port = dsn.split(':') + conn_params['host'] = host_port[0] + if len(host_port) > 1: + conn_params['port'] = int(host_port[1]) + + schema = conf.get(CKey.db_schema) + if schema: + conn_params['schema'] = schema + + return ibis.exasol.connect(**conn_params) diff --git a/poetry.lock b/poetry.lock index 2331131..6fa49cf 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2,18 +2,18 @@ [[package]] name = "accelerate" -version = "0.30.1" +version = "0.32.1" 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"sha256:a624db5e94f01ad993d476b9ee5346fdf7b9de43ccaee0e0197012dc838a0e9b"}, - {file = "virtualenv-20.26.2.tar.gz", hash = "sha256:82bf0f4eebbb78d36ddaee0283d43fe5736b53880b8a8cdcd37390a07ac3741c"}, + {file = "virtualenv-20.26.3-py3-none-any.whl", hash = "sha256:8cc4a31139e796e9a7de2cd5cf2489de1217193116a8fd42328f1bd65f434589"}, + {file = "virtualenv-20.26.3.tar.gz", hash = "sha256:4c43a2a236279d9ea36a0d76f98d84bd6ca94ac4e0f4a3b9d46d05e10fea542a"}, ] [package.dependencies] @@ -4217,20 +4401,20 @@ files = [ [[package]] name = "zipp" -version = "3.19.1" +version = "3.19.2" description = "Backport of pathlib-compatible object wrapper for zip files" optional = false python-versions = ">=3.8" files = [ - {file = "zipp-3.19.1-py3-none-any.whl", hash = "sha256:2828e64edb5386ea6a52e7ba7cdb17bb30a73a858f5eb6eb93d8d36f5ea26091"}, - {file = "zipp-3.19.1.tar.gz", hash = "sha256:35427f6d5594f4acf82d25541438348c26736fa9b3afa2754bcd63cdb99d8e8f"}, + {file = "zipp-3.19.2-py3-none-any.whl", hash = "sha256:f091755f667055f2d02b32c53771a7a6c8b47e1fdbc4b72a8b9072b3eef8015c"}, + {file = "zipp-3.19.2.tar.gz", hash = "sha256:bf1dcf6450f873a13e952a29504887c89e6de7506209e5b1bcc3460135d4de19"}, ] [package.extras] doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] -test = ["big-O", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"] +test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"] [metadata] lock-version = "2.0" -python-versions = ">=3.8.0,<4.0" -content-hash = "d0bdb52b8b8790b5868249a9148df633eed9bbc20171dcac863d8eb800f5ba80" +python-versions = ">=3.10,<4.0" +content-hash = "6cc43a6605086a2a64e1f4812d49b176ce33425adb671003d3cf65c4b44e5f2d" diff --git a/pyproject.toml b/pyproject.toml index 09c0758..1275caa 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -23,7 +23,7 @@ license = "MIT" [tool.poetry.dependencies] -python = ">=3.8.0,<4.0" +python = ">=3.10,<4.0" sqlcipher3-binary = {version = ">=0.5.0", platform = "linux"} sqlcipher3 = {version = ">=0.5.0", platform = "darwin"} sqlalchemy-exasol = ">=4.6.0" @@ -40,6 +40,7 @@ requests = ">=2.31.0,<2.32.0" types-requests = "^2.31.0.6" ifaddr = "^0.2.0" exasol-saas-api = {git = "https://github.com/exasol/saas-api-python.git", branch = "main"} +ibis-framework = {extras = ["exasol"], version = "^9.1.0"} [build-system] diff --git a/test/integration/test_itde_manager_in_docker_container.py b/test/integration/test_itde_manager_in_docker_container.py index 31844db..5268ffb 100644 --- a/test/integration/test_itde_manager_in_docker_container.py +++ b/test/integration/test_itde_manager_in_docker_container.py @@ -44,7 +44,7 @@ def remove_itde(): def dockerfile_content() -> str: return cleandoc( """ - FROM ubuntu:20.04 + FROM ubuntu:22.04 RUN apt-get update RUN apt-get install --yes --no-install-recommends python3 python3-pip git diff --git a/test/unit/test_connections.py b/test/unit/test_connections.py index 3f70b86..28fa425 100644 --- a/test/unit/test_connections.py +++ b/test/unit/test_connections.py @@ -16,6 +16,7 @@ open_bucketfs_connection, open_pyexasol_connection, open_sqlalchemy_connection, + open_ibis_connection ) from exasol.nb_connector.secret_store import Secrets from exasol.nb_connector.ai_lab_config import AILabConfig as CKey, StorageBackend @@ -265,3 +266,15 @@ def test_open_bucketfs_connection_saas(mock_database_id, mock_saas_bucket, conf_ database_id=database_id, pat=conf_saas.get(CKey.saas_token) ) + + +@unittest.mock.patch("ibis.exasol.connect") +def test_open_ibis_connection(mock_connect, conf): + schema = 'test_schema' + conf.save(CKey.db_schema, schema) + open_ibis_connection(conf) + mock_connect.assert_called_once_with( + host=conf.get(CKey.db_host_name), port=int(conf.get(CKey.db_port)), + user=conf.get(CKey.db_user), password=conf.get(CKey.db_password), + schema=schema + )