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pyproject.toml
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pyproject.toml
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[tool.poetry]
name = "mxcubecore"
version = "1.37.0"
license = "LGPL-3.0-or-later"
description = "Core libraries for the MXCuBE application"
authors = ["The MXCuBE collaboration <[email protected]>"]
maintainers = [
"Marcus Oscarsson <[email protected]>",
"Rasmus H. Fogh <[email protected]>",
"Antonia Beteva <[email protected]>",
]
readme = "README.md"
homepage = "http://github.com/mxcube/mxcubecore"
repository = "http://github.com/mxcube/mxcubecore"
documentation = ""
keywords = ["mxcube", "mxcube3", "mxcubecore"]
classifiers = [
"Development Status :: 5 - Production/Stable",
"Intended Audience :: Developers",
"Intended Audience :: Science/Research",
"Intended Audience :: End Users/Desktop",
"Natural Language :: English",
"Topic :: Scientific/Engineering",
]
[tool.poetry.dependencies]
python = ">=3.8,<3.11"
typing-extensions = "^4.3.0"
tomli = { version = "^2.0.1", python = "<=3.10" }
gevent = "^21.12.0"
greenlet = "^1.1.3"
jsonpickle = "^2.2.0"
jsonschema = "^4.17.1"
lxml = "^4.9.1"
matplotlib = [ { version = "3.5.3", python = "3.7" }, { version = "^3.6.2", python = ">=3.8" } ]
numpy = [ { version = "1.21.6", python = "3.7" }, { version = "^1.23.5", python = ">=3.8" } ]
Pillow = "^9.3.0"
pydantic = "^1.10.2"
PyDispatcher = "^2.0.6"
"ruamel.yaml" = "^0.17.21"
scipy = [ { version = "1.7.3", python = "3.7" }, { version = "^1.9.3", python = ">=3.8" } ]
suds-py3 = "1.4.5.0"
psutil = "^5.9.4"
gipc = "^1.4.0"
importlib_metadata = { version = ">=4.12.0", python = "3.7" }
py4j = "0.10.9.7"
f90nml = "1.4.3"
lucid3 = "^3.0.0"
PyTango = { version = "^9.3.6", optional = true }
python-ldap = "^3.4.0"
requests = "^2.31.0"
colorama = "^0.4.6"
ispyb-client = "^1.0.0"
[tool.poetry.dev-dependencies]
myst-parser = "^2.0.0"
pylint = [ { version = "==2.13.9", python = "<=3.7.1" }, { version = "^2.15.6", python = ">=3.8" } ]
pre-commit = "^2.20.0"
pytest = "^7.2.0"
pytest-cov = "^4.0.0"
pytest-mock = "^3.10.0"
sphinx = "<7.2"
[tool.poetry.extras]
tango = ["PyTango"]
[tool.autoflake]
#
# Exclude files below from autoflake checks until we get around fixing them.
# This way we can check that all other files are autoflake clean in CI.
#
exclude = """
deprecated/Command/Exporter/MDClient.py,
deprecated/HardwareObjects/Server/SimpleXMLReadWriteSupport.py,
deprecated/HardwareObjects/SpecShell.py,
deprecated/HardwareObjects/mockup/CameraMockup.py,
mxcubecore/HardwareObjects/ALBA/ALBAFastShutter.py,
mxcubecore/HardwareObjects/ALBA/ALBAFrontEnd.py,
mxcubecore/HardwareObjects/ALBA/ALBAMachineInfo.py,
mxcubecore/HardwareObjects/ALBA/ALBASupervisor.py,
mxcubecore/HardwareObjects/ALBA/XalocMachineInfo.py,
mxcubecore/HardwareObjects/EMBL/EMBLBeamline.py,
mxcubecore/HardwareObjects/EMBL/EMBLBeamlineTest.py,
mxcubecore/HardwareObjects/EMBL/EMBLFlux.py,
mxcubecore/HardwareObjects/EMBL/EMBLPiezoMotor.py,
mxcubecore/HardwareObjects/EMBL/EMBLXrayImaging.py,
mxcubecore/HardwareObjects/EMBL/TINEMotor.py,
mxcubecore/HardwareObjects/ESRF/ID30A1MultiCollect.py,
mxcubecore/HardwareObjects/ESRF/queue_entry/ssx_chip_collection.py,
mxcubecore/HardwareObjects/ESRF/queue_entry/ssx_injector_collection.py,
mxcubecore/HardwareObjects/Gphl/GphlWorkflow.py,
mxcubecore/HardwareObjects/LNLS/EPICSActuator.py,
mxcubecore/HardwareObjects/LNLS/LNLSCollect.py,
mxcubecore/HardwareObjects/LNLS/LNLSDetDistMotor.py,
mxcubecore/HardwareObjects/Lima2Detector.py,
mxcubecore/HardwareObjects/MAXIV/BIOMAXCollect.py,
mxcubecore/HardwareObjects/MAXIV/BIOMAXEiger.py,
mxcubecore/HardwareObjects/MAXIV/BIOMAXMD3Camera.py,
mxcubecore/HardwareObjects/MAXIV/MAXIVAutoProcessing.py,
mxcubecore/HardwareObjects/MAXIV/MAXIVMD2Camera.py,
mxcubecore/HardwareObjects/MAXIV/autoProcLauncher.py,
mxcubecore/HardwareObjects/MAXIV/ednaProcLauncher.py,
mxcubecore/HardwareObjects/SOLEIL/PX1/PX1Configuration.py,
mxcubecore/HardwareObjects/SOLEIL/PX1/PX1Energy.py,
mxcubecore/HardwareObjects/SOLEIL/PX1/PX1Resolution.py,
mxcubecore/HardwareObjects/SOLEIL/PX2/PX2Collect.py,
mxcubecore/HardwareObjects/SOLEIL/PX2/PX2Qt4_LimaVideo.py,
mxcubecore/HardwareObjects/SOLEIL/PX2/PX2Resolution.py,
mxcubecore/HardwareObjects/SOLEIL/PX2/PX2Video.py,
mxcubecore/HardwareObjects/SOLEIL/SOLEILMachineInfo.py,
mxcubecore/HardwareObjects/SOLEIL/SOLEILPss.py,
mxcubecore/HardwareObjects/SOLEIL/SOLEILqueue_entry.py,
mxcubecore/HardwareObjects/TangoLimaMpegVideo.py,
mxcubecore/HardwareObjects/XSDataMXCuBEv1_4.py,
mxcubecore/HardwareObjects/XSDataMXv1.py,
mxcubecore/model/common.py,
mxcubecore/model/queue_model_objects.py,
"""
[tool.black]
line-length = 88
include = '\.pyi?$'
force-exclude = '''
(
\.git
| \.hg
| \.mypy_cache
| \.tox
| \.venv
| _build
| buck-out
| build
| dist
# this file contains invalid python syntax
| mxcubecore/HardwareObjects/ESRF/ESRFMultiCollect.py
#
# Exclude files below from black checks until we get around fixing them.
# This way we can check that all other files are black clean in CI.
#
| deprecated/HardwareObjects/SpecScan.py
| deprecated/HardwareObjects/mockup/MultiCollectMockup.py
| mxcubecore/Command/Tango.py
| mxcubecore/HardwareObjects/ALBA/ALBAEpsActuator.py
| mxcubecore/HardwareObjects/ALBA/ALBAFastShutter.py
| deprecated/HardwareObjects/Server/__init__.py
| mxcubecore/HardwareObjects/ALBA/ALBAFlux.py
| mxcubecore/HardwareObjects/ALBA/ALBACats.py
| mxcubecore/HardwareObjects/ALBA/ALBAPilatus.py
| mxcubecore/HardwareObjects/ALBA/XalocMiniDiff.py
| mxcubecore/HardwareObjects/DESY/P11BackLight.py
| mxcubecore/HardwareObjects/ALBA/ALBACollect.py
| mxcubecore/HardwareObjects/DESY/P11DetectorCover.py
| mxcubecore/HardwareObjects/Beamline.py
| mxcubecore/HardwareObjects/DESY/P11DetectorDistance.py
| mxcubecore/HardwareObjects/DESY/P11Pinhole.py
| mxcubecore/HardwareObjects/DESY/P11EDNACharacterisation.py
| mxcubecore/HardwareObjects/DESY/P11Shutter.py
| mxcubecore/HardwareObjects/EMBL/EMBLAperture.py
| mxcubecore/HardwareObjects/EMBL/EMBLBSD.py
| mxcubecore/HardwareObjects/DESY/P11Collect.py
| mxcubecore/HardwareObjects/EMBL/EMBLBeamline.py
| mxcubecore/HardwareObjects/EMBL/EMBLBeamFocusing.py
| mxcubecore/HardwareObjects/EMBL/EMBLBeamCentering.py
| mxcubecore/HardwareObjects/EMBL/EMBLBeamstop.py
| mxcubecore/HardwareObjects/EMBL/EMBLBeamlineTest.py
| mxcubecore/HardwareObjects/EMBL/EMBLCRL.py
| mxcubecore/HardwareObjects/DESY/P11NanoDiff.py
| mxcubecore/HardwareObjects/EMBL/EMBLDoorInterlock.py
| mxcubecore/HardwareObjects/EMBL/EMBLDetector.py
| mxcubecore/HardwareObjects/EMBL/EMBLCollect.py
| mxcubecore/HardwareObjects/EMBL/EMBLEnergy.py
| mxcubecore/HardwareObjects/EMBL/EMBLEnergyScan.py
| mxcubecore/HardwareObjects/EMBL/EMBLFlux.py
| mxcubecore/HardwareObjects/EMBL/EMBLMachineInfo.py
| mxcubecore/HardwareObjects/EMBL/EMBLMotorsGroup.py
| mxcubecore/HardwareObjects/EMBL/EMBLSafetyShutter.py
| mxcubecore/HardwareObjects/EMBL/EMBLSSXChip.py
| mxcubecore/HardwareObjects/EMBL/EMBLTransfocator.py
| mxcubecore/HardwareObjects/EMBL/EMBLMiniDiff.py
| mxcubecore/HardwareObjects/EMBL/MDFastShutter.py
| mxcubecore/HardwareObjects/EMBL/EMBLSlitBox.py
| mxcubecore/HardwareObjects/EMBL/TINEMotor.py
| mxcubecore/HardwareObjects/EMBL/EMBLOnlineProcessing.py
| mxcubecore/HardwareObjects/ESRF/ID231BeamCmds.py
| mxcubecore/HardwareObjects/ESRF/ID232BeamDefiner.py
| mxcubecore/HardwareObjects/ESRF/ESRFEnergyScan.py
| mxcubecore/HardwareObjects/ESRF/ID29EnergyScan.py
| mxcubecore/HardwareObjects/ESRF/ID232MultiCollect.py
| mxcubecore/HardwareObjects/ESRF/ID29MultiCollect.py
| mxcubecore/HardwareObjects/ESRF/ID30BBeamCmds.py
| mxcubecore/HardwareObjects/ESRF/ESRFMetadataManagerClient.py
| mxcubecore/HardwareObjects/ESRF/ID30BPhotonFlux.py
| mxcubecore/HardwareObjects/ESRF/ID30A3MultiCollect.py
| mxcubecore/HardwareObjects/ESRF/Oxford700.py
| mxcubecore/HardwareObjects/ESRF/ID29XRFSpectrum.py
| mxcubecore/HardwareObjects/Gphl/GphlMessages.py
| mxcubecore/HardwareObjects/GenericDiffractometer.py
| mxcubecore/HardwareObjects/Gphl/Transcal2MiniKappa.py
| mxcubecore/HardwareObjects/LNLS/EPICSActuator.py
| mxcubecore/HardwareObjects/Gphl/GphlWorkflowConnection.py
| mxcubecore/HardwareObjects/LNLS/EPICSMotor.py
| mxcubecore/HardwareObjects/LNLS/LNLSAperture.py
| mxcubecore/HardwareObjects/LNLS/EPICSNState.py
| mxcubecore/HardwareObjects/LNLS/LNLSBeam.py
| mxcubecore/HardwareObjects/LNLS/LNLSDetDistMotor.py
| mxcubecore/HardwareObjects/LNLS/LNLSCamera.py
| mxcubecore/HardwareObjects/LNLS/LNLSEnergy.py
| mxcubecore/HardwareObjects/LNLS/LNLSDiffractometer.py
| mxcubecore/HardwareObjects/LNLS/LNLSTransmission.py
| mxcubecore/HardwareObjects/LNLS/LNLSZoom.py
| mxcubecore/HardwareObjects/LNLS/LNLSPilatusDet.py
| mxcubecore/HardwareObjects/LNLS/read_transmission_mnc.py
| mxcubecore/HardwareObjects/LNLS/set_transmission_mnc.py
| mxcubecore/HardwareObjects/Lima2Detector.py
| mxcubecore/HardwareObjects/Gphl/GphlWorkflow.py
| mxcubecore/HardwareObjects/ISPyBClient.py
| mxcubecore/HardwareObjects/MAXIV/BIOMAXEiger.py
| mxcubecore/HardwareObjects/MotorsNPosition.py
| mxcubecore/HardwareObjects/MAXIV/BIOMAXMD3.py
| mxcubecore/HardwareObjects/PlateManipulatorMaintenance.py
| mxcubecore/HardwareObjects/MAXIV/BIOMAXCollect.py
| mxcubecore/HardwareObjects/SOLEIL/PX1/PX1Cryotong.py
| mxcubecore/HardwareObjects/PlateManipulator.py
| mxcubecore/HardwareObjects/SOLEIL/PX2/PX2Resolution.py
| mxcubecore/HardwareObjects/SOLEIL/PX1/PX1Pilatus.py
| mxcubecore/HardwareObjects/SOLEIL/PX2/PX2Collect.py
| mxcubecore/HardwareObjects/SOLEIL/SOLEILLdapLogin.py
| mxcubecore/HardwareObjects/SOLEIL/TangoDCMotor.py
| mxcubecore/HardwareObjects/SOLEIL/PX1/PX1Collect.py
| mxcubecore/HardwareObjects/SOLEIL/SOLEILMachineInfo.py
| mxcubecore/HardwareObjects/TangoMotor.py
| mxcubecore/HardwareObjects/abstract/AbstractDetector.py
| mxcubecore/HardwareObjects/abstract/sample_changer/Crims.py
| mxcubecore/HardwareObjects/abstract/AbstractCollect.py
| mxcubecore/HardwareObjects/mockup/MotorMockup.py
| mxcubecore/HardwareObjects/mockup/ISPyBClientMockup.py
| mxcubecore/HardwareObjects/mockup/ShutterMockup.py
| mxcubecore/HardwareObjects/mockup/XRFSpectrumMockup.py
| mxcubecore/Poller.py
| mxcubecore/HardwareObjects/mockup/PlateManipulatorMockup.py
| mxcubecore/model/crystal_symmetry.py
| mxcubecore/HardwareObjects/XSDataMXCuBEv1_4.py
| mxcubecore/model/queue_model_objects.py
| mxcubecore/HardwareObjects/XSDataMXv1.py
)
'''
[build-system]
requires = ["poetry-core>=1.0.0", "setuptools>=45", "setuptools_scm[toml]>=6.2"]
build-backend = "poetry.core.masonry.api"