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Robustify facilitate(RangedSummarizedExperiment) #2

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lianos opened this issue Mar 3, 2020 · 0 comments
Open

Robustify facilitate(RangedSummarizedExperiment) #2

lianos opened this issue Mar 3, 2020 · 0 comments
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lianos commented Mar 3, 2020

I ran into all sorts of problems when running facilitate() on the RangedSummarizedExperiment from the airway package.

rowData wasn't being set, rownames lost, etc.

Follow up with the comments in facilitate.SummarizedExperiment() and make sure our solution is robust. Right now it's rather hacky.
@lianos lianos self-assigned this Mar 3, 2020
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