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pyop2.yml
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name: Test PyOP2 and TSFC
on:
push:
branches:
- master
pull_request:
jobs:
test:
runs-on: ubuntu-latest
strategy:
# Don't immediately kill all if one Python version fails
fail-fast: false
matrix:
python-version: ['3.10', '3.11', '3.12', '3.13']
env:
CC: mpicc
PETSC_DIR: ${{ github.workspace }}/petsc
PETSC_ARCH: default
RDMAV_FORK_SAFE: 1
PYOP2_CI_TESTS: 1
timeout-minutes: 60
steps:
- name: Install system dependencies
shell: bash
run: |
sudo apt update
sudo apt install build-essential libopenmpi-dev \
libblas-dev liblapack-dev gfortran libhwloc-dev libfabric-dev
- name: Set correct Python version
uses: actions/setup-python@v5
id: setup-python
with:
python-version: ${{ matrix.python-version }}
- name: Clone PETSc
uses: actions/checkout@v4
with:
repository: firedrakeproject/petsc
path: ${{ env.PETSC_DIR }}
- name: Build and install PETSc
shell: bash
working-directory: ${{ env.PETSC_DIR }}
run: |
./configure \
--download-hdf5 \
--with-debugging=1 \
--with-shared-libraries=1 \
--with-c2html=0 \
--with-fortran-bindings=0
make
- name: Checkout Firedrake
uses: actions/checkout@v4
with:
path: firedrake
- name: Install PyOP2 dependencies
shell: bash
working-directory: firedrake
run: |
python -m pip install -U pip
python -m pip install -U pytest-timeout
- name: Install PyOP2
shell: bash
working-directory: firedrake
run: |
export CC=mpicc
export HDF5_DIR="$PETSC_DIR/$PETSC_ARCH"
export HDF5_MPI=ON
python -m pip install --no-binary h5py -v ".[test]"
- name: Run TSFC tests
shell: bash
working-directory: firedrake
run: |
pytest --tb=native --timeout=480 --timeout-method=thread -o faulthandler_timeout=540 -v tests/tsfc
timeout-minutes: 10
- name: Run PyOP2 tests
shell: bash
working-directory: firedrake
run: |
pytest -m "not parallel" --tb=native --timeout=480 --timeout-method=thread -o faulthandler_timeout=540 -v tests/pyop2
mpiexec -n 2 --oversubscribe pytest -m "parallel[2]" --tb=native --timeout=480 --timeout-method=thread -o faulthandler_timeout=540 -v tests/pyop2
mpiexec -n 3 --oversubscribe pytest -m "parallel[3]" --tb=native --timeout=480 --timeout-method=thread -o faulthandler_timeout=540 -v tests/pyop2
timeout-minutes: 10