data.rst

github_url:	https://github.com/Project-MONAI/MONAI

Data

Generic Interfaces

.. currentmodule:: monai.data

Dataset

.. autoclass:: Dataset
  :members:
  :special-members: __getitem__

IterableDataset

.. autoclass:: IterableDataset
  :members:
  :special-members: __next__

CSVIterableDataset

.. autoclass:: CSVIterableDataset
  :members:
  :special-members: __next__

PersistentDataset

.. autoclass:: PersistentDataset
  :members:
  :special-members: __getitem__

CacheNTransDataset

.. autoclass:: CacheNTransDataset
  :members:
  :special-members: __getitem__

LMDBDataset

.. autoclass:: LMDBDataset
  :members:
  :special-members: __getitem__

CacheDataset

.. autoclass:: CacheDataset
  :members:
  :special-members: __getitem__

SmartCacheDataset

.. autoclass:: SmartCacheDataset
  :members:
  :special-members: __getitem__

ZipDataset

.. autoclass:: ZipDataset
  :members:
  :special-members: __getitem__

ArrayDataset

.. autoclass:: ArrayDataset
  :members:
  :special-members: __getitem__

ImageDataset

.. autoclass:: ImageDataset
  :members:
  :special-members: __getitem__

NPZDictItemDataset

.. autoclass:: NPZDictItemDataset
  :members:
  :special-members: __getitem__

CSVDataset

.. autoclass:: CSVDataset
  :members:
  :special-members: __getitem__

Patch-based dataset

GridPatchDataset

.. autoclass:: GridPatchDataset
  :members:

PatchIter

.. autoclass:: PatchIter
  :members:

PatchDataset

.. autoclass:: PatchDataset
  :members:

Image reader

ImageReader

.. autoclass:: ImageReader
  :members:

ITKReader

.. autoclass:: ITKReader
  :members:

NibabelReader

.. autoclass:: NibabelReader
  :members:

NumpyReader

.. autoclass:: NumpyReader
  :members:

PILReader

.. autoclass:: PILReader
  :members:

WSIReader

.. autoclass:: WSIReader
  :members:

Nifti format handling

Writing Nifti

.. autoclass:: monai.data.NiftiSaver
  :members:

.. autofunction:: monai.data.write_nifti

PNG format handling

Writing PNG

.. autoclass:: monai.data.PNGSaver
  :members:

.. autofunction:: monai.data.write_png

Synthetic

.. automodule:: monai.data.synthetic
  :members:

Utilities

.. automodule:: monai.data.utils
  :members:

Partition Dataset

.. autofunction:: monai.data.partition_dataset

Partition Dataset based on classes

.. autofunction:: monai.data.partition_dataset_classes

DistributedSampler

.. autoclass:: monai.data.DistributedSampler

DistributedWeightedRandomSampler

.. autoclass:: monai.data.DistributedWeightedRandomSampler

DatasetSummary

.. autoclass:: monai.data.DatasetSummary

Decathlon Datalist

.. autofunction:: monai.data.load_decathlon_datalist

DataLoader

.. autoclass:: monai.data.DataLoader

ThreadBuffer

.. autoclass:: monai.data.ThreadBuffer

TestTimeAugmentation

.. autoclass:: monai.data.TestTimeAugmentation