From 4a03e801811c53235f43eb915ac42ec86c2a4fe4 Mon Sep 17 00:00:00 2001 From: lorenzocerrone Date: Thu, 7 Nov 2024 15:14:22 +0000 Subject: [PATCH] deploy: 40f2440b66b56b97aa234792183f637068338508 --- api/core/index.html | 12 +- getting-started/index.html | 4 +- index.html | 4 +- notebooks/basic_usage/index.html | 4 +- notebooks/image/index.html | 431 ++++++++++++++----------------- notebooks/processing/index.html | 211 +++++++-------- search/search_index.json | 2 +- 7 files changed, 318 insertions(+), 350 deletions(-) diff --git a/api/core/index.html b/api/core/index.html index 6f2d7f8..cbe7bd0 100644 --- a/api/core/index.html +++ b/api/core/index.html @@ -1195,7 +1195,7 @@

default_kwargs = { "store": store, - "on_disk_shape": image_0.on_disk_shape, + "shape": image_0.on_disk_shape, "chunks": image_0.on_disk_array.chunks, "dtype": image_0.on_disk_array.dtype, "on_disk_axis": image_0.dataset.on_disk_axes_names, @@ -1204,7 +1204,7 @@

"z_scaling_factor": self.image_meta.z_scaling_factor, "time_spacing": image_0.dataset.time_spacing, "time_units": image_0.dataset.time_axis_unit, - "levels": self.num_levels, + "num_levels": self.num_levels, "name": name, "channel_labels": image_0.channel_labels, "channel_wavelengths": [ch.wavelength_id for ch in channels], @@ -1515,7 +1515,7 @@

default_kwargs = { "store": store, - "on_disk_shape": image_0.on_disk_shape, + "shape": image_0.on_disk_shape, "chunks": image_0.on_disk_array.chunks, "dtype": image_0.on_disk_array.dtype, "on_disk_axis": image_0.dataset.on_disk_axes_names, @@ -1524,7 +1524,7 @@

"z_scaling_factor": self.image_meta.z_scaling_factor, "time_spacing": image_0.dataset.time_spacing, "time_units": image_0.dataset.time_axis_unit, - "levels": self.num_levels, + "num_levels": self.num_levels, "name": name, "channel_labels": image_0.channel_labels, "channel_wavelengths": [ch.wavelength_id for ch in channels], @@ -1870,7 +1870,7 @@

- November 7, 2024 + November 6, 2024 @@ -1880,7 +1880,7 @@

- November 7, 2024 + November 6, 2024 diff --git a/getting-started/index.html b/getting-started/index.html index ca80921..8dec45a 100644 --- a/getting-started/index.html +++ b/getting-started/index.html @@ -676,7 +676,7 @@

Example Usage

- November 7, 2024 + November 6, 2024 @@ -686,7 +686,7 @@

Example Usage

- November 7, 2024 + November 6, 2024 diff --git a/index.html b/index.html index ba1c3a6..9eb442c 100644 --- a/index.html +++ b/index.html @@ -793,7 +793,7 @@

License

- November 7, 2024 + November 6, 2024 @@ -803,7 +803,7 @@

License

- November 7, 2024 + November 6, 2024 diff --git a/notebooks/basic_usage/index.html b/notebooks/basic_usage/index.html index 530d71c..f8993bf 100644 --- a/notebooks/basic_usage/index.html +++ b/notebooks/basic_usage/index.html @@ -1836,7 +1836,7 @@

Derive a new NgffImage - November 7, 2024 + November 6, 2024 @@ -1846,7 +1846,7 @@

Derive a new NgffImage - November 7, 2024 + November 6, 2024 diff --git a/notebooks/image/index.html b/notebooks/image/index.html index 15cbfa5..f4c4078 100644 --- a/notebooks/image/index.html +++ b/notebooks/image/index.html @@ -1440,79 +1440,87 @@

RoiTable/Image Interaction - - @@ -1599,78 +1607,8 @@

RoiTable/Image Interaction - @@ -1993,7 +1931,7 @@

Creating a new tableprint(f"New list of feature table: {ngff_image.table.list(table_type='feature_table')}") feat_table.set_table(feat_df) -feat_table.consolidate() +feat_table.write() feat_table.table @@ -2027,7 +1965,7 @@

Creating a new table @@ -2042,98 +1980,121 @@

Creating a new table + @@ -2169,7 +2130,7 @@

Creating a new table - November 7, 2024 + November 6, 2024 @@ -2179,7 +2140,7 @@

Creating a new table - November 7, 2024 + November 6, 2024 diff --git a/notebooks/processing/index.html b/notebooks/processing/index.html index ad70c69..fd9aca4 100644 --- a/notebooks/processing/index.html +++ b/notebooks/processing/index.html @@ -1272,8 +1272,8 @@

step 2: Create a new ng - @@ -1545,17 +1507,8 @@

step 4: Consolidate the result @@ -1614,7 +1567,7 @@

step 5: Create a new ROI tablestep 5: Create a new ROI table @@ -1729,8 +1746,8 @@

step 1: Derive a new -