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environment_ubuntu.yml
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environment_ubuntu.yml
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name: hsfm
channels:
- conda-forge
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_gnu
- affine=2.3.0=py_0
- aiodns=2.0.0=py_2
- aiohttp=3.7.4.post0=py38h497a2fe_0
- aiohttp-client-cache=0.4.3=pyhd8ed1ab_0
- aioredis=1.3.1=py_0
- aiosqlite=0.17.0=pyhd8ed1ab_0
- appdirs=1.4.4=pyh9f0ad1d_0
- argon2-cffi=20.1.0=py38h497a2fe_2
- async-timeout=3.0.1=py_1000
- async_generator=1.10=py_0
- async_retriever=0.2.2=pyhd8ed1ab_0
- attrs=21.2.0=pyhd8ed1ab_0
- awscli=1.19.35=py38h578d9bd_0
- backcall=0.2.0=pyh9f0ad1d_0
- backports=1.0=py_2
- backports.functools_lru_cache=1.6.4=pyhd8ed1ab_0
- black=20.8b1=py_1
- bleach=4.1.0=pyhd8ed1ab_0
- blosc=1.21.0=h9c3ff4c_0
- bokeh=1.3.4=py38_0
- boost-cpp=1.74.0=h9359b55_0
- boto3=1.17.35=pyhd8ed1ab_0
- botocore=1.20.35=pyhd8ed1ab_0
- brotli=1.0.9=h7f98852_5
- brotli-bin=1.0.9=h7f98852_5
- brotlipy=0.7.0=py38h497a2fe_1001
- brunsli=0.1=h9c3ff4c_0
- bzip2=1.0.8=h7f98852_4
- c-ares=1.17.2=h7f98852_0
- ca-certificates=2021.5.30=ha878542_0
- cairo=1.16.0=h9f066cc_1006
- cartopy=0.18.0=py38h88488af_4
- cattrs=1.8.0=pyhd8ed1ab_0
- cchardet=2.1.7=py38h709712a_1
- certifi=2021.5.30=py38h578d9bd_0
- cffi=1.14.3=py38h1bdcb99_1
- cfitsio=3.470=hb418390_7
- cftime=1.5.0=py38hb5d20a5_0
- chardet=4.0.0=py38h578d9bd_1
- charls=2.1.0=he1b5a44_2
- charset-normalizer=2.0.0=pyhd8ed1ab_0
- click-plugins=1.1.1=py_0
- cligj=0.7.2=pyhd8ed1ab_0
- cloudpickle=1.6.0=py_0
- cmocean=2.0=py_3
- colorama=0.4.3=py_0
- colorcet=2.0.6=pyhd8ed1ab_0
- colorspacious=1.1.2=pyh24bf2e0_0
- contextily=1.0.1=py_0
- cryptography=3.4.7=py38ha5dfef3_0
- curl=7.71.1=he644dc0_8
- cycler=0.10.0=py_2
- cytoolz=0.11.0=py38h497a2fe_3
- dask=2021.8.1=pyhd8ed1ab_0
- dask-core=2021.8.1=pyhd8ed1ab_0
- dataclasses=0.8=pyhc8e2a94_3
- datashader=0.11.1=pyh9f0ad1d_0
- datashape=0.5.4=py_1
- dbus=1.13.6=hfdff14a_1
- debugpy=1.4.1=py38h709712a_0
- decorator=4.4.2=py_0
- defusedxml=0.7.1=pyhd8ed1ab_0
- descartes=1.1.0=py_4
- distributed=2021.8.1=py38h578d9bd_0
- docutils=0.15.2=py38h578d9bd_2
- entrypoints=0.3=pyhd8ed1ab_1003
- expat=2.2.10=h9c3ff4c_0
- ffmpeg=4.3.2=hca11adc_0
- fiona=1.8.17=py38h676c6b2_1
- fontconfig=2.13.1=hba837de_1005
- freetype=2.10.4=h0708190_1
- freexl=1.0.6=h7f98852_0
- fsspec=0.8.7=pyhd8ed1ab_0
- gdal=3.1.3=py38h9edfc58_1
- geographiclib=1.52=pyhd8ed1ab_0
- geopandas=0.8.1=py_0
- geopy=2.2.0=pyhd8ed1ab_0
- geos=3.8.1=he1b5a44_0
- geotiff=1.6.0=h5d11630_3
- geoviews=1.6.6=py_1
- geoviews-core=1.6.6=py_1
- gettext=0.19.8.1=hf34092f_1004
- giflib=5.2.1=h36c2ea0_2
- glib=2.66.1=he1b5a44_1
- gmp=6.2.1=h58526e2_0
- gnutls=3.6.13=h85f3911_1
- graphite2=1.3.13=h58526e2_1001
- gst-plugins-base=1.14.5=h0935bb2_2
- gstreamer=1.14.5=h36ae1b5_2
- harfbuzz=2.7.2=hb1ce69c_1
- haversine=2.3.0=py_0
- hdf4=4.2.15=h10796ff_3
- hdf5=1.10.6=nompi_h6a2412b_1114
- heapdict=1.0.1=py_0
- hiredis=1.1.0=py38h1e0a361_1
- holoviews=1.12.7=pyh9f0ad1d_1
- hvplot=0.6.0=pyh9f0ad1d_0
- icu=67.1=he1b5a44_0
- idna=3.1=pyhd3deb0d_0
- imagecodecs=2020.5.30=py38h63741c2_4
- imageio=2.9.0=py_0
- importlib-metadata=4.7.1=py38h578d9bd_1
- ipykernel=6.2.0=py38he5a9106_0
- ipympl=0.6.3=pyhd8ed1ab_0
- ipython=7.26.0=py38he5a9106_0
- ipython_genutils=0.2.0=py_1
- ipywidgets=7.6.3=pyhd3deb0d_0
- itsdangerous=2.0.1=pyhd8ed1ab_0
- jasper=1.900.1=h07fcdf6_1006
- jedi=0.18.0=py38h578d9bd_2
- jinja2=3.0.1=pyhd8ed1ab_0
- jmespath=0.10.0=pyh9f0ad1d_0
- joblib=1.0.1=pyhd8ed1ab_0
- jpeg=9d=h36c2ea0_0
- json-c=0.13.1=hbfbb72e_1002
- jsoncpp=1.8.4=hc9558a2_1002
- jsonschema=3.2.0=pyhd8ed1ab_3
- jupyter=1.0.0=py38h578d9bd_6
- jupyter_client=7.0.1=pyhd8ed1ab_0
- jupyter_console=6.4.0=pyhd8ed1ab_0
- jupyter_core=4.7.1=py38h578d9bd_0
- jupyterlab_pygments=0.1.2=pyh9f0ad1d_0
- jupyterlab_widgets=1.0.0=pyhd8ed1ab_1
- jxrlib=1.1=h7f98852_2
- kealib=1.4.14=hcc255d8_2
- kiwisolver=1.3.1=py38h1fd1430_1
- krb5=1.17.2=h926e7f8_0
- lame=3.100=h7f98852_1001
- laszip=3.4.3=he1b5a44_1
- laz-perf=2.1.0=py38h709712a_3
- lcms2=2.11=hcbb858e_1
- ld_impl_linux-64=2.36.1=hea4e1c9_2
- lerc=2.2.1=h9c3ff4c_0
- libaec=1.0.5=h9c3ff4c_0
- libblas=3.9.0=11_linux64_openblas
- libbrotlicommon=1.0.9=h7f98852_5
- libbrotlidec=1.0.9=h7f98852_5
- libbrotlienc=1.0.9=h7f98852_5
- libcblas=3.9.0=11_linux64_openblas
- libclang=10.0.1=default_hde54327_1
- libcurl=7.71.1=hcdd3856_8
# - libdap4=3.20.6=hd7c4107_1
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libevent=2.1.10=hcdb4288_3
- libffi=3.2.1=he1b5a44_1007
- libgcc-ng=11.1.0=hc902ee8_8
- libgdal=3.1.3=h670eac6_1
- libgfortran-ng=11.1.0=h69a702a_8
- libgfortran5=11.1.0=h6c583b3_8
- libglib=2.66.1=h0dae87d_1
- libgomp=11.1.0=hc902ee8_8
- libiconv=1.16=h516909a_0
- libkml=1.3.0=h02e6976_1012
- liblapack=3.9.0=11_linux64_openblas
- liblapacke=3.9.0=11_linux64_openblas
- libllvm10=10.0.1=he513fc3_3
- libnetcdf=4.7.4=nompi_h56d31a8_107
- libnghttp2=1.43.0=h812cca2_0
- libopenblas=0.3.17=pthreads_h8fe5266_1
- libopencv=4.4.0=py38_3
- libpng=1.6.37=h21135ba_2
- libpq=12.3=h5513abc_2
- librttopo=1.1.0=hb271727_4
- libsodium=1.0.18=h36c2ea0_1
- libspatialindex=1.9.3=h9c3ff4c_4
- libspatialite=5.0.1=h6ec7341_0
- libssh2=1.9.0=ha56f1ee_6
- libstdcxx-ng=11.1.0=h56837e0_8
- libtiff=4.1.0=hc7e4089_6
- libuuid=2.32.1=h7f98852_1000
- libwebp-base=1.1.0=h516909a_3
- libxcb=1.13=h7f98852_1003
- libxkbcommon=0.10.0=he1b5a44_0
- libxml2=2.9.10=h68273f3_2
- libzopfli=1.0.3=h9c3ff4c_0
- llvmlite=0.36.0=py38h4630a5e_0
- locket=0.2.0=py_2
- lz4-c=1.9.2=he1b5a44_3
- markdown=3.3.4=pyhd8ed1ab_0
- markupsafe=2.0.1=py38h497a2fe_0
- matplotlib=3.3.2=py38h32f6830_1
- matplotlib-base=3.3.2=py38h4d1ce4f_1
- matplotlib-inline=0.1.2=pyhd8ed1ab_2
- mercantile=1.2.1=pyhd8ed1ab_0
- mistune=0.8.4=py38h497a2fe_1004
- msgpack-python=1.0.2=py38h1fd1430_1
- multidict=5.1.0=py38h497a2fe_1
- multipledispatch=0.6.0=py_0
- munch=2.5.0=py_0
- mypy_extensions=0.4.3=py38h578d9bd_3
- mysql-common=8.0.21=2
- mysql-libs=8.0.21=hf3661c5_2
- nb_conda_kernels=2.3.1=py38h578d9bd_0
- nbclient=0.5.4=pyhd8ed1ab_0
- nbconvert=6.1.0=py38h578d9bd_0
- nbformat=5.1.3=pyhd8ed1ab_0
- ncurses=6.2=h58526e2_4
- nest-asyncio=1.5.1=pyhd8ed1ab_0
- netcdf4=1.5.4=nompi_py38hec8b9af_103
- nettle=3.6=he412f7d_0
- networkx=2.6.2=pyhd8ed1ab_0
- nitro=2.7.dev6=he1b5a44_3
- notebook=6.4.3=pyha770c72_0
- nspr=4.30=h9c3ff4c_0
- nss=3.69=hb5efdd6_0
- numba=0.53.1=py38h8b71fd7_1
- numpy=1.19.2=py38hf89b668_1
- olefile=0.46=pyh9f0ad1d_1
- opencv=4.4.0=py38_3
- openh264=2.1.1=h780b84a_0
- openjpeg=2.3.1=hf7af979_3
- openssl=1.1.1l=h7f98852_0
- orjson=3.6.3=py38h497a2fe_0
- owslib=0.24.1=pyhd8ed1ab_0
- packaging=21.0=pyhd8ed1ab_0
- pandas=1.1.3=py38hc5bc63f_2
- pandoc=2.14.2=h7f98852_0
- pandocfilters=1.4.2=py_1
- panel=0.6.4=0
- param=1.9.3=py_0
- parso=0.8.2=pyhd8ed1ab_0
- partd=1.2.0=pyhd8ed1ab_0
- pathspec=0.9.0=pyhd8ed1ab_0
- patsy=0.5.1=py_0
- pcre=8.45=h9c3ff4c_0
- pdal=2.2.0=ha9435c1_1
- pexpect=4.8.0=pyh9f0ad1d_2
- pickleshare=0.7.5=py_1003
- pillow=8.0.0=py38h9776b28_0
- pip=20.2.4=py_0
- pixman=0.40.0=h36c2ea0_0
- poppler=0.89.0=h669c267_1
- poppler-data=0.4.10=0
- postgresql=12.3=h8573dbc_2
- proj=7.1.1=h966b41f_3
- prometheus_client=0.11.0=pyhd8ed1ab_0
- prompt-toolkit=3.0.20=pyha770c72_0
- prompt_toolkit=3.0.20=hd8ed1ab_0
- psutil=5.8.0=py38h497a2fe_1
- pthread-stubs=0.4=h36c2ea0_1001
- ptyprocess=0.7.0=pyhd3deb0d_0
- py-opencv=4.4.0=py38h1cdfbd6_3
- py3dep=0.11.1=pyhd8ed1ab_0
- pyasn1=0.4.8=py_0
- pycares=4.0.0=py38h497a2fe_0
- pycparser=2.20=pyh9f0ad1d_2
- pyct=0.4.6=py_0
- pyct-core=0.4.6=py_0
- pydantic=1.8.2=py38h497a2fe_0
- pyepsg=0.4.0=py_0
- pygeoogc=0.11.3=pyhd8ed1ab_0
- pygeoutils=0.11.3=pyhd8ed1ab_0
- pygments=2.10.0=pyhd8ed1ab_0
- pyopenssl=20.0.1=pyhd8ed1ab_0
- pyparsing=2.4.7=pyh9f0ad1d_0
- pyproj=2.6.1.post1=py38h56787f0_3
- pyqt=5.12.3=py38h578d9bd_7
- pyqt-impl=5.12.3=py38h7400c14_7
- pyqt5-sip=4.19.18=py38h709712a_7
- pyqtchart=5.12=py38h7400c14_7
- pyqtwebengine=5.12.1=py38h7400c14_7
- pyrsistent=0.17.3=py38h497a2fe_2
- pyshp=2.1.3=pyh44b312d_0
- pysocks=1.7.1=py38h578d9bd_3
- python=3.8.6=h852b56e_0_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python-forge=18.6.0=pyhd8ed1ab_0
- python_abi=3.8=2_cp38
- pytz=2021.1=pyhd8ed1ab_0
- pyviz_comms=2.1.0=pyhd8ed1ab_0
- pywavelets=1.1.1=py38h5c078b8_3
- pyyaml=5.4.1=py38h497a2fe_1
- pyzmq=22.2.1=py38h2035c66_0
- qt=5.12.9=h1f2b2cb_0
- qtconsole=5.1.1=pyhd8ed1ab_0
- qtpy=1.10.0=pyhd8ed1ab_0
- rasterio=1.1.7=py38h676c6b2_1
- rasterstats=0.14.0=py_0
- readline=8.1=h46c0cb4_0
- regex=2021.8.21=py38h497a2fe_0
- requests=2.26.0=pyhd8ed1ab_0
- requests-cache=0.7.4=pyhd8ed1ab_0
- rioxarray=0.7.0=pyhd8ed1ab_0
- rsa=4.7.2=pyh44b312d_0
- rtree=0.9.7=py38h02d302b_2
- s3fs=0.4.2=py_0
- s3transfer=0.3.6=pyhd8ed1ab_0
- scikit-image=0.17.2=py38hc5bc63f_3
- scipy=1.5.2=py38hd648e70_2
- seaborn=0.11.0=0
- seaborn-base=0.11.0=py_0
- send2trash=1.8.0=pyhd8ed1ab_0
- setuptools=57.4.0=py38h578d9bd_0
- shapely=1.7.1=py38hc7361b7_1
- simplejson=3.17.5=py38h497a2fe_0
- six=1.16.0=pyh6c4a22f_0
- snappy=1.1.8=he1b5a44_3
- snuggs=1.4.7=py_0
- sortedcontainers=2.4.0=pyhd8ed1ab_0
- sqlite=3.36.0=h9cd32fc_0
- statsmodels=0.12.2=py38h5c078b8_0
- tblib=1.7.0=pyhd8ed1ab_0
- terminado=0.11.1=py38h578d9bd_0
- testpath=0.5.0=pyhd8ed1ab_0
- tifffile=2020.10.1=py_0
- tiledb=2.1.1=h47b529c_1
- tk=8.6.11=h21135ba_0
- toml=0.10.2=pyhd8ed1ab_0
- toolz=0.11.1=py_0
- tornado=6.1=py38h497a2fe_1
- traitlets=5.0.5=py_0
- typed-ast=1.4.3=py38h497a2fe_0
- typing-extensions=3.10.0.0=hd8ed1ab_0
- typing_extensions=3.10.0.0=pyha770c72_0
- tzcode=2021a=h7f98852_2
- url-normalize=1.4.3=pyhd8ed1ab_0
- urllib3=1.26.6=pyhd8ed1ab_0
- utm=0.6.0=pyh9f0ad1d_0
- wcwidth=0.2.5=pyh9f0ad1d_2
- webencodings=0.5.1=py_1
- wheel=0.37.0=pyhd8ed1ab_1
- widgetsnbextension=3.5.1=py38h578d9bd_4
- x264=1!161.3030=h7f98852_1
- xarray=0.19.0=pyhd8ed1ab_1
- xerces-c=3.2.3=hfe33f54_1
- xlrd=2.0.1=pyhd8ed1ab_3
- xmltodict=0.12.0=py_0
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.7.2=h7f98852_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h7f98852_1
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h7f98852_1002
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.5=h516909a_1
- yaml=0.2.5=h516909a_0
- yarl=1.6.3=py38h497a2fe_2
- zeromq=4.3.4=h9c3ff4c_1
- zfp=0.5.5=h9c3ff4c_5
- zict=2.0.0=py_0
- zipp=3.5.0=pyhd8ed1ab_0
- zlib=1.2.11=h516909a_1010
- zstd=1.4.5=h6597ccf_2
- pip:
- "--editable=git+https://github.com/dshean/pygeotools.git#egg=pygeotools"
- "--editable=git+https://github.com/dshean/demcoreg.git#egg=demcoreg"
- "--editable=git+https://github.com/dshean/imview.git#egg=imview"
- "--editable=git+https://github.com/friedrichknuth/bare.git#egg=bare"
- "--editable=git+https://github.com/friedrichknuth/driveanon.git#egg=driveanon"
- beautifulsoup4==4.9.3
- bs4==0.0.1
- click==6.7
- elevation==1.0.6
- fasteners==0.15
- future==0.18.2
- matplotlib-colorbar==0.4.0
- matplotlib-scalebar==0.6.2
# - metashape==1.6.1
- monotonic==1.5
- soupsieve==2.0.1
- wget==3.2