diff --git a/packages/contented-example/docs/09-Others/02-limitations.md b/packages/contented-example/docs/09-Others/02-limitations.md
index 700cd2c5..5024a5d3 100644
--- a/packages/contented-example/docs/09-Others/02-limitations.md
+++ b/packages/contented-example/docs/09-Others/02-limitations.md
@@ -8,6 +8,6 @@ Since the purpose of Contented is to encourage authoring through a set of tools
 been for engineers to produce more markdowns (_.md) or processed prose (`_.json`). The focus is never about building a
 complete documentation website.
 
-In fact, you should take the output(s) of [`contented build`](../03-api.md) that are published into npm; and pull them
+In fact, you should take the output(s) of [`contented build`](../03-api.md#contented-build) that are published into npm; and pull them
 into your main/official website for re-presentation (`npm i, import from`). Remember, the prose/content/narrative
 created is what's valuable here. Design can easily change, but your content stands the test of time.
diff --git a/packages/contented-pipeline/src/Pipeline.ts b/packages/contented-pipeline/src/Pipeline.ts
index 585f2f03..ddeae559 100644
--- a/packages/contented-pipeline/src/Pipeline.ts
+++ b/packages/contented-pipeline/src/Pipeline.ts
@@ -97,16 +97,17 @@ export abstract class ContentedPipeline {
 
   protected computePath(sections: string[], parsedPath: ParsedPath) {
     const dir = `${sections.map((s) => (s !== '..' ? slugify(s) : s)).join('/')}`;
-    const file = `${slugify(this.replacePrefix(parsedPath.name))}`;
+    const file = this.computeFileName(parsedPath.name);
+    const fileFragment = this.computeFileFragment(parsedPath);
     if (file === 'index') {
-      return dir;
+      return `${dir}${fileFragment}`;
     }
 
     if (dir === '') {
-      return file;
+      return `${file}${fileFragment}`;
     }
 
-    return `${dir}/${file}`;
+    return `${dir}/${file}${fileFragment}`;
   }
 
   protected computeSections(parsedPath: ParsedPath) {
@@ -125,6 +126,56 @@ export abstract class ContentedPipeline {
     return path;
   }
 
+  /**
+   * Compute the file name without any linking.
+   * Do use this instead of extracting manually.
+   * @param rawFileName The raw file name from ParsedPath
+   */
+  protected computeFileName(rawFileName: string): string {
+    if (rawFileName.includes('#')) {
+      const splitNames = rawFileName.split('#');
+
+      /**
+       * We only want it if its exactly length of 2.
+       * Title#subtile is valid, but Title#subtitle#whatisthis should not be valid.
+       * If its not valid just use the name as it is.
+       */
+      if (splitNames.length === 2) {
+        return `${slugify(this.replacePrefix(splitNames[0]))}`;
+      }
+    }
+    return `${slugify(this.replacePrefix(rawFileName))}`;
+  }
+
+  /**
+   * Extract the fragment identifier from the read file.
+   * Depending if extension of the files are provided,
+   * the fragment identifier will be in ext or the file name.
+   * @param parsedPath
+   */
+  protected computeFileFragment(parsedPath: ParsedPath): string {
+    if (parsedPath.ext !== '' && parsedPath.ext.includes('#')) {
+      const linkMatches = parsedPath.ext.match(/^(\.\w+)(#.+)*$/);
+      if (linkMatches !== null) {
+        return linkMatches[2] ?? '';
+      }
+    }
+
+    if (parsedPath.name !== '' && parsedPath.name.includes('#')) {
+      const splits = parsedPath.name.split('#');
+
+      /**
+       * We only want it if its exactly length of 2.
+       * Title#subtile is valid, but Title#subtitle#whatisthis should not be valid
+       */
+      if (splits.length === 2) {
+        return `#${splits[1]}`;
+      }
+    }
+
+    return '';
+  }
+
   protected computeFileId(filePath: string) {
     return createHash('sha256').update(filePath).digest('hex');
   }
diff --git a/packages/contented-pipeline/src/Pipeline.unit.ts b/packages/contented-pipeline/src/Pipeline.unit.ts
index 1e9b6519..f2ecc8db 100644
--- a/packages/contented-pipeline/src/Pipeline.unit.ts
+++ b/packages/contented-pipeline/src/Pipeline.unit.ts
@@ -47,3 +47,40 @@ it('should replace numeric prefix path', () => {
   expect(pipeline.getSanitizedPath('(01)Header/[01]Path.md')).toStrictEqual('header/path');
   expect(pipeline.getSanitizedPath(':01:Header/[01-Path.md')).toStrictEqual('header/01-path');
 });
+
+it('should preserve fragment identifiers for files', () => {
+  const pipeline = new TestPipeline(__dirname, {
+    type: 'Type',
+    pattern: '**/*.md',
+    processor: 'md',
+  });
+
+  // With file extensions
+  expect(pipeline.getSanitizedPath('path-1.md#content1')).toStrictEqual('path-1#content1');
+
+  expect(pipeline.getSanitizedPath(':01:path.md#content1')).toStrictEqual('path#content1');
+  expect(pipeline.getSanitizedPath(':01path.md#content1')).toStrictEqual('01path#content1');
+
+  expect(pipeline.getSanitizedPath('[01]path.md#content1')).toStrictEqual('path#content1');
+  expect(pipeline.getSanitizedPath('01]path.md#content1')).toStrictEqual('01-path#content1');
+
+  expect(pipeline.getSanitizedPath('(01)path.md#content1')).toStrictEqual('path#content1');
+  expect(pipeline.getSanitizedPath('(01path.md#content1')).toStrictEqual('01path#content1');
+
+  expect(pipeline.getSanitizedPath('01-path.md#content1')).toStrictEqual('path#content1');
+  expect(pipeline.getSanitizedPath('01path.md#content1')).toStrictEqual('01path#content1');
+  expect(pipeline.getSanitizedPath('01.md#content1')).toStrictEqual('01#content1');
+
+  expect(pipeline.getSanitizedPath('01/01.md#content1')).toStrictEqual('01/01#content1');
+  expect(pipeline.getSanitizedPath('Header/Path.md#content1')).toStrictEqual('header/path#content1');
+  expect(pipeline.getSanitizedPath('Header/01-Path.md#content1')).toStrictEqual('header/path#content1');
+  expect(pipeline.getSanitizedPath('01-Header/01-Path.md#content1')).toStrictEqual('header/path#content1');
+  expect(pipeline.getSanitizedPath('01-Header/[01]Path.md#content1')).toStrictEqual('header/path#content1');
+  expect(pipeline.getSanitizedPath('(01)Header/[01]Path.md#content1')).toStrictEqual('header/path#content1');
+  expect(pipeline.getSanitizedPath(':01:Header/[01-Path.md#content1')).toStrictEqual('header/01-path#content1');
+
+  // Without file extensions
+  expect(pipeline.getSanitizedPath('path01#content1')).toStrictEqual('path01#content1');
+  expect(pipeline.getSanitizedPath('01-path#content1')).toStrictEqual('path#content1');
+  expect(pipeline.getSanitizedPath('Header/01-Path#content1')).toStrictEqual('header/path#content1');
+});