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In line 754 of randompca.cpp. The code uses read_text to read maf file assuming that the maf file follows the format "SNP Allele MAF". Meanwhile the current .frq format returned by plink (option --freq) follows the format "CHR SNP A1 A2 MAF NCHROBS"
The text was updated successfully, but these errors were encountered:
In line 754 of randompca.cpp. The code uses read_text to read maf file assuming that the maf file follows the format "SNP Allele MAF". Meanwhile the current .frq format returned by plink (option --freq) follows the format "CHR SNP A1 A2 MAF NCHROBS"
The text was updated successfully, but these errors were encountered: