diff --git a/bin/create_interactive_table.sh b/bin/create_interactive_table.sh
deleted file mode 100644
index 59869e58..00000000
--- a/bin/create_interactive_table.sh
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/usr/bin/env bash
-
-mkdir -p 'results/microgalaxy'
-
-python bin/create_interactive_table.py \
- --table 'results/microgalaxy/tools.tsv' \
- --template 'data/microgalaxy/datatable_template.html' \
- --output 'results/microgalaxy/index.html'
diff --git a/bin/filter_microgalaxy_tools.sh b/bin/get_microgalaxy_tools.sh
similarity index 74%
rename from bin/filter_microgalaxy_tools.sh
rename to bin/get_microgalaxy_tools.sh
index b3613fd6..b8684d5b 100644
--- a/bin/filter_microgalaxy_tools.sh
+++ b/bin/get_microgalaxy_tools.sh
@@ -18,4 +18,9 @@ python bin/extract_galaxy_tools.py \
--filtered_tools 'results/microgalaxy/tools.tsv' \
--categories "data/microgalaxy/categories" \
--exclude "data/microgalaxy/tools_to_exclude" \
- --keep "data/microgalaxy/tools_to_keep"
\ No newline at end of file
+ --keep "data/microgalaxy/tools_to_keep"
+
+python bin/create_interactive_table.py \
+ --table 'results/microgalaxy/tools.tsv' \
+ --template 'data/interactive_table_template.html' \
+ --output 'results/microgalaxy/index.html'
diff --git a/data/microgalaxy/tools_to_exclude b/data/microgalaxy/tools_to_exclude
index d451b4a0..6f30553a 100644
--- a/data/microgalaxy/tools_to_exclude
+++ b/data/microgalaxy/tools_to_exclude
@@ -139,6 +139,7 @@ inforna
intarna
kinwalker
locarna
+mea
mqc
nastiseq
paralyzer
diff --git a/data/microgalaxy/tools_to_keep b/data/microgalaxy/tools_to_keep
index 96cfbdfe..0e2d8278 100644
--- a/data/microgalaxy/tools_to_keep
+++ b/data/microgalaxy/tools_to_keep
@@ -47,7 +47,6 @@ nucleosome_prediction
pfamscan
racon
infernal
-mea
rRNA
reago
sortmerna
diff --git a/results/microgalaxy/index.html b/results/microgalaxy/index.html
index b5fe6647..ae0ad294 100644
--- a/results/microgalaxy/index.html
+++ b/results/microgalaxy/index.html
@@ -1057,26 +1057,6 @@
bgruening |
https://github.com/bgruening/galaxytools/tree/master/tools/infernal |
-
- |
- mea |
- 0.6.4.1 |
- 0.6.4 |
- mea |
- To update |
- |
- |
- |
- |
- Maximum expected accuracy prediction |
- |
- To update |
- http://www.bioinf.uni-leipzig.de/Software/mea |
- RNA |
- mea |
- rnateam |
- https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/mea |
-
|
rRNA |
diff --git a/results/microgalaxy/tools.tsv b/results/microgalaxy/tools.tsv
index e2919ba7..1195fd8b 100644
--- a/results/microgalaxy/tools.tsv
+++ b/results/microgalaxy/tools.tsv
@@ -189,7 +189,7 @@ inforna INFO-RNA is a service for the design of RNA sequences that fold into a
intarna intarna Efficient RNA-RNA interaction prediction incorporating accessibility and seeding of interaction sites. Up-to-date https://github.com/BackofenLab/IntaRNA RNA intarna rnateam https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/intarna 3.3.2 intarna 3.3.2 True False
kinwalker Kinwalker splits the folding process into a series of events where each event can either be a folding event or a transcription event. To update http://www.bioinf.uni-leipzig.de/Software/Kinwalker/ RNA kinwalker rnateam https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/kinwalker True False
locarna locarna_exparnap, locarna_multiple, locarna_pairwise, locarna_pairwise_p, locarna_reliability_profile LocARNA - A suite for multiple alignment and folding of RNAs To update http://www.bioinf.uni-freiburg.de/Software/LocARNA/ RNA locarna rnateam https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna 1.9.2.3 locarna 2.0.0 True False
-mea mea Maximum expected accuracy prediction To update http://www.bioinf.uni-leipzig.de/Software/mea RNA mea rnateam https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/mea 0.6.4.1 mea 0.6.4 True True
+mea mea Maximum expected accuracy prediction To update http://www.bioinf.uni-leipzig.de/Software/mea RNA mea rnateam https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/mea 0.6.4.1 mea 0.6.4 True False
mqc mqc Ribosome profiling mapping quality control tool To update https://github.com/Biobix/mQC Sequence Analysis mqc rnateam https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/mqc/ 1.9 mqc 1.10 True False
nastiseq nastiseq A method to identify cis-NATs using ssRNA-seq Up-to-date https://ohlerlab.mdc-berlin.de/software/NASTIseq_104/ RNA nastiseq rnateam https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/nastiseq 1.0 r-nastiseq 1.0 True False
paralyzer paralyzer A method to generate a high resolution map of interaction sites between RNA-binding proteins and their targets. Up-to-date https://ohlerlab.mdc-berlin.de/software/PARalyzer_85/ RNA paralyzer rnateam https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/paralyzer 1.5 paralyzer 1.5 True False