From 92b0bb0f30b6f96d98202a588401b3290bd432a5 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B6rn=20Gr=C3=BCning?= Date: Tue, 12 Sep 2023 10:12:36 +0200 Subject: [PATCH 1/3] add drep --- tools.yml | 7 +++++-- 1 file changed, 5 insertions(+), 2 deletions(-) diff --git a/tools.yml b/tools.yml index e5616ff..ab475d9 100644 --- a/tools.yml +++ b/tools.yml @@ -1155,8 +1155,11 @@ tools: env: DISCO_MAX_MEMORY: '{mem}' toolshed.g2.bx.psu.edu/repos/iuc/drep_dereplicate/drep_dereplicate/.*: - cores: 6 - mem: 12 + mem: 16 + cores: 16 + toolshed.g2.bx.psu.edu/repos/iuc/drep_compare/drep_compare/.*: + mem: 8 + cores: 8 toolshed.g2.bx.psu.edu/repos/iuc/edger/edger/.*: mem: 19.0 toolshed.g2.bx.psu.edu/repos/iuc/exonerate/exonerate/.*: From a8e220e904db771258616c3968a4c0415935a75a Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Bj=C3=B6rn=20Gr=C3=BCning?= Date: Tue, 12 Sep 2023 10:42:56 +0200 Subject: [PATCH 2/3] fix lint --- tools.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/tools.yml b/tools.yml index ab475d9..d3007e5 100644 --- a/tools.yml +++ b/tools.yml @@ -1155,11 +1155,11 @@ tools: env: DISCO_MAX_MEMORY: '{mem}' toolshed.g2.bx.psu.edu/repos/iuc/drep_dereplicate/drep_dereplicate/.*: - mem: 16 cores: 16 + mem: 16 toolshed.g2.bx.psu.edu/repos/iuc/drep_compare/drep_compare/.*: - mem: 8 cores: 8 + mem: 8 toolshed.g2.bx.psu.edu/repos/iuc/edger/edger/.*: mem: 19.0 toolshed.g2.bx.psu.edu/repos/iuc/exonerate/exonerate/.*: From a902558f1fe8a16bbc5d26a6f8d0c8120c51e752 Mon Sep 17 00:00:00 2001 From: cat-bro Date: Tue, 3 Oct 2023 22:26:36 +1100 Subject: [PATCH 3/3] alphabetical order --- tools.yml | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/tools.yml b/tools.yml index d3007e5..a8cf22b 100644 --- a/tools.yml +++ b/tools.yml @@ -1154,12 +1154,12 @@ tools: mem: 24 env: DISCO_MAX_MEMORY: '{mem}' - toolshed.g2.bx.psu.edu/repos/iuc/drep_dereplicate/drep_dereplicate/.*: - cores: 16 - mem: 16 toolshed.g2.bx.psu.edu/repos/iuc/drep_compare/drep_compare/.*: cores: 8 mem: 8 + toolshed.g2.bx.psu.edu/repos/iuc/drep_dereplicate/drep_dereplicate/.*: + cores: 16 + mem: 16 toolshed.g2.bx.psu.edu/repos/iuc/edger/edger/.*: mem: 19.0 toolshed.g2.bx.psu.edu/repos/iuc/exonerate/exonerate/.*: