From f99100a5172f4c63c1eafea90af23ac2cf006de8 Mon Sep 17 00:00:00 2001 From: lenaarenot Date: Fri, 18 Oct 2024 11:17:24 +0200 Subject: [PATCH] adding lotus2 and merginh mothur tools to 1 bullet point --- topics/microbiome/tutorials/visualisation-ampvis/tutorial.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/topics/microbiome/tutorials/visualisation-ampvis/tutorial.md b/topics/microbiome/tutorials/visualisation-ampvis/tutorial.md index 7f4484b82fa14..62f1dfe5f03c0 100644 --- a/topics/microbiome/tutorials/visualisation-ampvis/tutorial.md +++ b/topics/microbiome/tutorials/visualisation-ampvis/tutorial.md @@ -47,9 +47,9 @@ using your own data or download the data we used, thus follow this tutorial step These OTU tables can be generated using various tools on Galaxy: > Generate OTU or ASV table with one of this tools > -> 1. {% tool [Cluster](toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Fmothur_cluster%2Fmothur_cluster%2F1.39.5.0) %} +> 1. Use one of this mothur tools: {% tool [Cluster](toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Fmothur_cluster%2Fmothur_cluster%2F1.39.5.0) %} or {% tool [Hcluster](toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Fmothur_hcluster%2Fmothur_hcluster%2F1.36.1.0&version=latest) %} > -> 2. {% tool [Hcluster](toolshed.g2.bx.psu.edu%2Frepos%2Fiuc%2Fmothur_hcluster%2Fmothur_hcluster%2F1.36.1.0&version=latest) %} +> 2. {% tool [LotuS2](toolshed.g2.bx.psu.edu/repos/earlhaminst/lotus2/lotus2/2.32+galaxy0) %} > > 3. {% tool [qiime2 fragment-insertion classify-otus-experimental](toolshed.g2.bx.psu.edu%2Frepos%2Fq2d2%2Fqiime2__fragment_insertion__classify_otus_experimental%2Fqiime2__fragment_insertion__classify_otus_experimental%2F2024.5.0%2Bq2galaxy.2024.5.0&version=latest) %} >