From 72cd9f44ae9bfe14ae430cb891284237a4e2876e Mon Sep 17 00:00:00 2001 From: suzialeksander Date: Mon, 6 May 2024 23:51:13 -0600 Subject: [PATCH] Update gene-product-association-data-gpad-format-20.md --- _docs/gene-product-association-data-gpad-format-20.md | 10 ++++++---- 1 file changed, 6 insertions(+), 4 deletions(-) diff --git a/_docs/gene-product-association-data-gpad-format-20.md b/_docs/gene-product-association-data-gpad-format-20.md index 71f53abc..1d4742f3 100644 --- a/_docs/gene-product-association-data-gpad-format-20.md +++ b/_docs/gene-product-association-data-gpad-format-20.md @@ -37,10 +37,6 @@ Submitting groups may choose to include optional additional information, for exa ### Annotation file fields The GPAD format comprises 12 tab-delimited fields. Some fields are optional, some fields are mandatory and cardinality varies by field and other conditions. For fields that permit multiple values, values should be separated by pipes (\|) for `OR` statements and commas (,) for `AND` statements. -GPAD 2.0 sample line: - - SGD:S000002164 NOT RO:0002331 GO:0043409 PMID:26546002 ECO:0000316 SGD:S000003631 2018-01-19 SGD RO:0002233(UniProtKB:Q00772),BFO:0000050(GO:0071852) noctua-model-id=gomodel:6086f4f200000223|model-state=production|contributor=orcid:0000-0003-3212-6364 - | **Column** | **Content** | **Required?** | **Cardinality** | **Example** | |----------|---------|-------------|---------|--------| |1 | [DB:DB_Object_ID ](#1-db-db-object-id "Definition and requirements for DB:DB Object ID (column 1)") | required | 1 | SGD:S000002164 | @@ -56,6 +52,12 @@ GPAD 2.0 sample line: |11 | [Annotation Extension](#11-annotation-extension "Definition and requirements for Annotation Extension (column 11)") | optional | 0 or greater | RO:0002233(UniProtKB:Q00772),BFO:0000050(GO:0071852)| |12 | [Annotation Properties](#12-annotation-properties "Definition and requirements for Annotation Properties (column 12)") | optional | 0 or greater | noctua-model-id=gomodel:6086f4f200000223\|model-state=production\|contributor=orcid:0000-0003-3212-6364| +### GPAD 2.0 examples + + SGD:S000002164 NOT RO:0002331 GO:0043409 PMID:26546002 ECO:0000316 SGD:S000003631 2018-01-19 SGD RO:0002233(UniProtKB:Q00772),BFO:0000050(GO:0071852) noctua-model-id=gomodel:6086f4f200000223|model-state=production|contributor=orcid:0000-0003-3212-6364 + UniProtKB:A0AA85ABI6 RO:0002327 GO:0017128 GO_REF:0000118 ECO:0007826 PANTHER:PTHR23248:SF9 2024-04-08 TreeGrafter id=GOA:8034655976|comment=go_evidence:IEA + + ### Definitions and requirements for field contents #### 1. DB:DB Object ID