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Review annotations to GO:0000170 sphingosine hydroxylase activity (with replacement) #5670

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raymond91125 opened this issue Feb 21, 2025 · 1 comment
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annotation review direct_ann_to_list_of_terms Direct annotations to list of GO terms

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@raymond91125
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raymond91125 commented Feb 21, 2025

Dear all,

The proposal has been made to obsolete GO:0000170 sphingosine hydroxylase activity
see geneontology/go-ontology#29717.
(to be replaced by the same and better defined GO:0102772 sphingolipid C4-monooxygenase activity)

Experimental annotations that need to be reviewed are here:
https://docs.google.com/spreadsheets/d/1z1hE5t7jUy8HFdspQLOwJSGuHYhaa4g44hRRv-c-FVo/edit?gid=0#gid=0

Impacted groups:
GR 1
MGI 2
PomBase 2 DONE
Reactome 1
SGD 2
TAIR 2

** Group contacts: https://github.com/geneontology/go-site/blob/master/metadata/group-contacts.csv

Mappings that need to be reviewed: (InterPro2GO, UniProt-Keywords, UniRule)
reactome2go Reactome:R-HSA-428260 > GO:sphingosine hydroxylase activity ; GO:0000170

Thanks.

@lreiser
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lreiser commented Feb 22, 2025

TAIR done

@lreiser lreiser removed their assignment Feb 22, 2025
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Labels
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