From 68928a10953769118ade4b3c7361eca358f68872 Mon Sep 17 00:00:00 2001 From: dustine32 Date: Wed, 10 Jun 2020 16:13:19 -0700 Subject: [PATCH] Make pigz recipes more specific; #1484 --- scripts/Makefile-gaf-reprocess | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/scripts/Makefile-gaf-reprocess b/scripts/Makefile-gaf-reprocess index 484b9b64..82a4cce9 100644 --- a/scripts/Makefile-gaf-reprocess +++ b/scripts/Makefile-gaf-reprocess @@ -7,7 +7,7 @@ BASE_NAMES = $(filter-out %.gpi.gz, $(notdir ,$(wildcard /opt/go-site/annotation all: $(foreach name,$(BASE_NAMES),/opt/go-site/annotations_new/$(name)) -%.gz: % +/opt/go-site/%.gz: /opt/go-site/% pigz $< /opt/go-site/annotations_new/%.gaf: /opt/go-site/annotations/%.gaf /opt/go-site/gaferencer-products/all.gaferences.json @@ -16,5 +16,5 @@ all: $(foreach name,$(BASE_NAMES),/opt/go-site/annotations_new/$(name)) /opt/go-site/annotations_new/%.gpad: /opt/go-site/annotations/%.gpad /opt/go-site/gaferencer-products/all.gaferences.json ontobio-parse-assocs.py -f $< -F gpad -o $@ -I /opt/go-site/gaferencer-products/all.gaferences.json --report-md /tmp/report.md --report-json /tmp/report.json convert -to gpad -%: %.gz +/opt/go-site/%: /opt/go-site/%.gz unpigz $<