diff --git a/lib/workflows/umi-pipeline.nf b/lib/workflows/umi-pipeline.nf index fae468e..479a948 100644 --- a/lib/workflows/umi-pipeline.nf +++ b/lib/workflows/umi-pipeline.nf @@ -75,11 +75,6 @@ workflow UMI_PIPELINE { CLUSTER( DETECT_UMI_FASTQ.out.umi_extract_fastq, raw ) REFORMAT_FILTER_CLUSTER( CLUSTER.out.cluster_fastas, raw, umi_parse_clusters ) - - REFORMAT_FILTER_CLUSTER.out.smolecule_cluster_fastqs - .filter{ sample, type, fastqs -> fastqs.class == ArrayList} - .set{ smolecule_cluster_fastqs_list } - } //////////////////