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blobtools don't install correctly after system upgrate to MacOS Sonoma #225

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ksenia-krasheninnikova opened this issue Jan 6, 2025 · 6 comments

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@ksenia-krasheninnikova
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After system update to MacOS Sonoma 14.7.2 (23H311) the previous blobtools installation didn't work.
The previous conda installation was removed and the package was reinstalled with the following steps (from here) which leads to Python import error:

$ conda create -y -n btk -c conda-forge python=3.9
$ conda activate btk
$ pip install blobtoolkit
$ blobtools -h
Traceback (most recent call last):
  File "/Users/kk16/miniconda3/envs/btk/bin/blobtools", line 5, in <module>
    from blobtools import cli
ModuleNotFoundError: No module named 'blobtools'

Have tried conda clean -p before creating btk environment and pip cache purge out of btk env before running pip install with no luck.

@rjchallis
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Hi Ksenia

I've had a few problems with the automated MacOS builds. Could you confirm if you are on an intel or Apple silicon Mac so I can check the builds and try to fix this.

@ksenia-krasheninnikova
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Hi Rich

I'm on the Apple chip: Apple M3 Pro

Thank you for looking into it

@rjchallis
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I've just checked and pip install blobtoolkit==4.3 should be working while I fix the packaging for the latest version

@ksenia-krasheninnikova
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It works for me. Thanks!

@rjchallis
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This should be working now with pip install blobtoolkit to pull in v4.4.2

@ksenia-krasheninnikova
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Can confirm it does work for me.

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