diff --git a/modules/classes/patient_and_specimen.yaml b/modules/classes/patient_and_specimen.yaml index 64fc3c1..36ecfd6 100644 --- a/modules/classes/patient_and_specimen.yaml +++ b/modules/classes/patient_and_specimen.yaml @@ -1,5 +1,12 @@ classes: + Patient: + annotations: + requiresComponent: '' + required: false + slots: + - Component + CohortCoreTemplate: is_a: Patient annotations: @@ -7,14 +14,15 @@ classes: required: false slots: - ParticipantID + - TimepointLabel - Age - Sex - - BMI - Race - Ethnicity - VitalStatus - Height - Weight + - BMI - Gravidity - Parity - AgeAtMenarche @@ -29,21 +37,15 @@ classes: - PackYearsSmoked - AlcoholUse - NumberofDrinksPerWeek + - ContraceptiveUse - AntibioticUse - SampleCollectionCenter - SampleCollectionYear - ERStatus - PRStatus - HER2Status + - SurgeryReason - Patient: - annotations: - requiresComponent: '' - required: false - slots: - - Component - - ParticipantID - - TimepointLabel PatientExtended: is_a: Patient