diff --git a/modules/classes/patient_and_specimen.yaml b/modules/classes/patient_and_specimen.yaml index fa46b9e..933cd8f 100644 --- a/modules/classes/patient_and_specimen.yaml +++ b/modules/classes/patient_and_specimen.yaml @@ -47,6 +47,19 @@ classes: - SampleCollectionCenter - SampleCollectionYear + BreastAtlasCohort: + title: Breast Atlas Cohort + required: false + description: Group of individuals featured in the breast precancer atlas. + slots: + + OvarianAtlasCohort: + title: Ovarian Atlas Cohort + required: false + description: Group of individuals featured in the ovarian precancer atlas. + slots: + - MenstrualCyclePhase + - TypeContraceptiveUse PatientExtended: is_a: Patient diff --git a/modules/slots.yaml b/modules/slots.yaml index fdfd6df..9ef6f73 100644 --- a/modules/slots.yaml +++ b/modules/slots.yaml @@ -450,16 +450,6 @@ slots: - Breast Atlas Cohort - Ovarian Atlas Cohort annotations: - BreastAtlasCohort: - title: Breast Atlas Cohort - required: false - description: Group of individuals featured in the breast precancer atlas. - annotations: - OvarianAtlasCohort: - title: Ovarian Atlas Cohort - required: false - description: Group of individuals featured in the ovarian precancer atlas. - annotations: Comment: title: Comment required: false @@ -1038,7 +1028,6 @@ slots: description: Phase of the menstrual cycle at patient sample collection. range: MenstrualCyclePhaseEnum annotations: - requiresDependency: Ovarian Atlas Cohort MetalIsotopeElement: title: Metal Isotope Element required: false @@ -1843,7 +1832,6 @@ slots: description: Type of contraceptive(s) used within the individual's history. range: Contraceptive annotations: - requiresDependency: Ovarian Atlas Cohort TypeofSmokeExposure: title: Type of Smoke Exposure required: false