From 34279b0276a3244f0cca3f5227c959866ddcf4a0 Mon Sep 17 00:00:00 2001
From: carrascomj <carrascomurielj@gmail.com>
Date: Wed, 27 Jan 2021 12:08:04 +0100
Subject: [PATCH] chore: change setup management

---
 ecgem/__init__.py |  2 +-
 setup.cfg         | 27 ++++++++++++++++++++++++++-
 setup.py          | 20 +++-----------------
 3 files changed, 30 insertions(+), 19 deletions(-)

diff --git a/ecgem/__init__.py b/ecgem/__init__.py
index e7e3eae..8750c2b 100644
--- a/ecgem/__init__.py
+++ b/ecgem/__init__.py
@@ -1 +1 @@
-from .dirt import from_copy_number, from_mmol_gDW
+from .io import from_copy_number, from_mmol_gDW
diff --git a/setup.cfg b/setup.cfg
index 1016f09..0be4377 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -1,3 +1,28 @@
+[metadata]
+name = ecgem
+description = Enzyme Constraint genome-scale models
+keywords = 
+  python
+  metabolic-models 
+  bioinformatics 
+  systems-biology
+long_description = file: README.md
+version = 0.0.1
+
+[options]
+zip_safe = True
+install_requires =
+    cobra~=0.20.0
+    pandas~=1.1.5
+packages = find:
+
+[options.extras_require]
+dev =
+  black
+  isort
+  tox
+  pytest
+
 [flake8]
 max-line-length = 88
-exlude = __init__.py
+exclude = __init__.py
diff --git a/setup.py b/setup.py
index 7ed44b8..7f1a176 100644
--- a/setup.py
+++ b/setup.py
@@ -1,18 +1,4 @@
-from setuptools import setup, find_packages
+from setuptools import setup
 
-
-def readme():
-    with open("README.md") as f:
-        return f.read()
-
-
-setup(
-    name="ecgem",
-    version="0.0.1",
-    description="Enzyme Constraint genome-scale models",
-    keywords="python metabolic-models bioinformatics systems-biology",
-    license="MIT",
-    packages=find_packages(),
-    install_requires=["cobra==0.20.0", "pandas==1.1.5"],
-    zip_safe=False,
-)
+if __name__ == "__main__":
+    setup()