-
Notifications
You must be signed in to change notification settings - Fork 1
/
Copy pathd3test.html
161 lines (161 loc) · 4.85 KB
/
d3test.html
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
<!doctype html>
<html>
<head>
<title>D3 Force-Directed Graph Test</title>
<meta charset="utf-8">
<link rel="stylesheet" href="d3test.css">
<!-- Import D3 -->
<script src="https://d3js.org/d3.v6.min.js"></script>
<!-- Import JSZip -->
<script src="jszip.min.js"></script>
<!-- Cheater functions for pulling in the KEGG data -->
<script src="internal/loadKLC.js"></script>
<script src="internal/loadKRE.js"></script>
<!-- Import own scripts -->
<script src="scripts/assignEmptyHeader.js"></script>
<script src="scripts/checkDataPresent.js"></script>
<script src="scripts/cleanNames.js"></script>
<script src="scripts/convKeggListCompound.js"></script>
<script src="scripts/convKeggReactionEquation.js"></script>
<script src="scripts/convRawTsvJson.js"></script>
<script src="scripts/getAllCompounds.js"></script>
<script src="scripts/getOppose.js"></script>
<script src="scripts/getWithId.js"></script>
<script src="scripts/getWithLinks.js"></script>
<script src="scripts/numLinks.js"></script>
<script src="scripts/openTab.js"></script>
<script src="scripts/pickAnchor.js"></script>
<script src="scripts/processTsv.js"></script>
<script src="scripts/processZip.js"></script>
<script src="scripts/readFile.js"></script>
<script src="scripts/reduceOppose.js"></script>
<script src="scripts/reduceShortlist.js"></script>
<script src="scripts/reduceUniqueNames.js"></script>
<script src="scripts/runSimulation.js"></script>
<script src="scripts/shortlistReactions.js"></script>
<script src="scripts/subsetData.js"></script>
<script src="scripts/swapOtherIds.js"></script>
<script src="scripts/unzip.js"></script>
</head>
<body onload="document.getElementById('defaultOpen').click();">
<!-- Define the tab buttons -->
<div class="tab">
<button
class="tabButton"
id="defaultOpen"
onclick="openTab(event, 'main');"
>
Main
</button>
<button
class="tabButton"
onclick="openTab(event, 'tab01');"
>
ZIP upload
</button>
<button
class="tabButton"
onclick="openTab(event, 'tab02');"
>
TSV upload
</button>
</div>
<!-- Define tab content -->
<div class="tabContent" id="main">
<div style="padding: 0px 14px">
<h1>Main Tab</h1>
</div>
<div style="padding: 0px 14px">
<p>
This page is for testing data handling for the D3 force-directed
graph (network) visualisation of metabolites.
</p>
<p>
Mr. George L. Malone, 22<sup>nd</sup> of February, 2021.
</p>
</div>
</div>
<div class="tabContent" id="tab01">
<div style="padding: 0px 14px">
<h2>ZIP upload</h2>
</div>
<div style="padding-bottom: 6px">
<input
type="file"
id="zipUpload"
style="display: none;"
onchange="processZip();"
>
</input>
<div class="table" style="padding-left: 14px">
<div class="table-row">
<div class="table-cell">
<button
class="inputButton"
onclick="document.getElementById('zipUpload').click();"
>
Upload ZIP
</button>
</div>
</div>
</div>
</div>
<hr>
<div style="padding-bottom: 14px">
<h2>Visualisation</h2>
</div>
<div id="sinkSvgZip">
<svg
id="svgZip"
height="720px"
width="900px"
style="background: #fffaf0;"
>
</svg>
</div>
</div>
<div class="tabContent" id="tab02">
<div style="padding: 0px 14px">
<h2>TSV upload</h2>
<p>
<strong>NOTE: </strong>Only use this for metabolite shortlists, as
the number of first neighbours can be quite large!
</p>
</div>
<div style="padding-bottom: 6px">
<input
type="file"
id="tsvUpload"
style="display: none;"
onchange="this.files[0].text().then(processTsv);"
>
</input>
<div class="table" style="padding-left: 14px">
<div class="table-row">
<div class="table-cell">
<button
class="inputButton"
onclick="document.getElementById('tsvUpload').click();"
>
Upload TSV
</button>
</div>
</div>
</div>
</div>
<hr>
<div style="padding-bottom: 14px">
<h2>Visualisation</h2>
</div>
<div id="sinkSvgTsv">
<svg
id="svgTsv"
height="720px"
width="900px"
style="background: #fffaf0;"
>
</svg>
</div>
</div>
</body>
</html>