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layout id title type status contact implementations issues fail_mode
rule
GORULE:0000023
Materialize annotations for inter-branch links in the GO
report
proposed
soft

Annotations will be propagated from MF to BP over part_of, or from BP to CC over occurs_in.

Background

Historically GO treated MF, BP and CC as distinct ontologies. They are now better regarded as branchers or sub-hierarchies within a single ontology, cross-linked via a variety of relations. Annotators used to make manual duplicate annotations.

Procedure

  • Any asserted or inferred annotation to MF, where MF part-of BP, will generate an involved-in to that BP
  • Any asserted or inferred annotation to BP, where BP occurs-in CC, will generate a part-of annotation to that CC

Evidence and provenance

  • Evidence, references, publications, date are retained
  • Assigned_by is GOC

TBD

Should this pipeline filter annotations based on some redundancy criteria?