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Problem with installing dependancies #2

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raoden1 opened this issue Nov 21, 2018 · 4 comments
Open

Problem with installing dependancies #2

raoden1 opened this issue Nov 21, 2018 · 4 comments

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@raoden1
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raoden1 commented Nov 21, 2018

I cannot install dependancies:

**conda env create -f env.yml**

Solving environment: failed

ResolvePackageNotFound: 
  - python==3.6.5=hc167b69_0
  - xz==5.2.3=h0278029_2
  - numpy==1.12.1=py36h8871d66_1
  - zlib==1.2.11=hf3cbc9b_2
  - six==1.11.0=py36h0e22d5e_1
  - readline==7.0=hc1231fa_4
  - sqlite==3.23.1=hf1716c9_0
  - libgfortran==3.0.1=h93005f0_2
  - libedit==3.1=hb4e282d_0
  - pyyaml==3.12=py36h2ba1e63_1
  - libffi==3.2.1=h475c297_4
  - hdf5==1.10.1=ha036c08_1
  - protobuf==3.5.2=py36h0a44026_0
  - libprotobuf==3.5.2=h2cd40f5_0
  - libcxx==4.0.1=h579ed51_0
  - scipy==1.0.1=py36hcaad992_0
  - openssl==1.0.2o=h26aff7b_0
  - libcxxabi==4.0.1=hebd6815_0
  - yaml==0.1.7=hc338f04_2
  - pandas==0.22.0=py36h0a44026_0
  - tk==8.6.7=h35a86e2_3
  - h5py==2.7.1=py36h39cdac5_0
  - ncurses==6.0=hd04f020_2a
@OsandaG
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OsandaG commented Mar 4, 2019

Seems to same the same problem, with anaconda python 3.7 on Ubuntu 18.04, so changed the export file as follows:

`name: drlts
channels:

  • conda-forge
  • bioconda
  • bokeh
  • defaults
    dependencies:
    • ca-certificates=2018.03.07
    • certifi=2018.4.16
    • h5py=2.7.1
    • hdf5=1.10.1
    • intel-openmp=2018.0.0
    • keras=2.1.5
    • libcxx
    • libedit=3.1
    • libffi=3.2.1
    • libgfortran
    • libprotobuf=3.5.2
    • mkl=2018.0.2
    • ncurses=6.0
    • numpy=1.12.1
    • openssl=1.0.2o
    • pandas=0.22.0
    • pip=9.0.3
    • protobuf=3.5.2
    • python=3.6.5
    • python-dateutil=2.7.2
    • pytz=2018.4
    • pyyaml=3.12
    • readline=7.0
    • scipy=1.0.1
    • setuptools=39.0.1
    • six=1.11.0
    • sqlite=3.23.1
    • tensorflow=1.1.0
    • tk=8.6.7
    • werkzeug=0.14.1
    • wheel=0.31.0
    • xz=5.2.3
    • yaml=0.1.7
    • zlib=1.2.11
      `

@OsandaG
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OsandaG commented Mar 4, 2019

Think Theano will need to be complied on your local system

@greg2paris
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I created a simple google colab file from this implementation, so you can easily run it with your own google drive and colab.

  1. Just copy the entire directory from this github to your google drive directory.
  2. Copy the google colab file I created.
  3. Change the "google_drive_directory_path" value to your own google drive directory.
  4. Use python 3 and GPU accelerator.
  5. Run the code.

https://colab.research.google.com/drive/1GMxAUdpU38DFOsSL4r0AglpdIe00YpAP

Tell me if you have any problem running the code,
Greg

@zhongkeshuanghe
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I didn't find your train/ test/ folder used in your notebook

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