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Resubmission

This is a an updated version. In this version I have:

  • Fixed an error cause by changes to the ggtree plotting package

Resubmission

This is a an updated version. In this version I have:

  • Fixed a bug that caused the algorithm to stop prematurely on large alignments

Resubmission

This is a an updated version. In this version I have:

  • Fixed a minor bug that caused an error when a cluster contained only a single SNP
  • Added functionality to accept an ape DNAbin object

Test environments

  • local OS X install, R 3.6.1
  • ubuntu 16.04 (on travis-ci), R 3.6.1
  • win-builder (devel and release)

R CMD check results

There were no ERRORs, WARNINGs or NOTEs.