diff --git a/nextflow.config b/nextflow.config index 53b5b1a..7b7cbc1 100644 --- a/nextflow.config +++ b/nextflow.config @@ -2,7 +2,12 @@ manifest.mainScript = 'grape-pipeline.nf' //Use Docker by default -docker.enabled = true +docker { + enabled = true + sudo = false + fixOwnership = true + runOptions = "-u `id -u $USER`" +} //Enable trace by default trace.enabled = true