pyproject.toml

[project]
name = "protmapper"
version = "0.0.29"
description = "Map protein sites to human reference sequence."
keywords = ["protein", "proteomics", "sequence", "alignment", "assembly", "post-translational", "modification"]
readme = "README.md"
authors = [
    {name = "John A. Bachman", email = "bachmanjohn@gmail.com"},
    {name = "Benjamin M. Gyori", email = "b.gyori@northeastern.edu"},
]
classifiers = [
    "Development Status :: 4 - Beta",
    "Environment :: Console",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: BSD License",
    "Operating System :: OS Independent",
    "Programming Language :: Python :: 3",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
]
dependencies = [
    "boto3",
    "pystow>=0.1.0",
    "requests",
    "tqdm",
]
requires-python = ">=3.8"

[project.urls]
Homepage = "https://github.com/gyorilab/protmapper"

[project.optional-dependencies]
rest_api = [
    "flask",
    "flask_cors",
]
tests = [
    "pytest",
    "pytest-cov"
]

[project.scripts]
protmapper = "protmapper.cli:main"

[build-system]
requires = ["setuptools", "wheel"]
build-backend = "setuptools.build_meta"

[tool.pytest.ini_options]
markers = [
    "webservice: marks tests that rely on third-party webservices",
]