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Screening sequences using Infernal or HMMER #60

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cjfields opened this issue Jan 26, 2025 · 0 comments
Open

Screening sequences using Infernal or HMMER #60

cjfields opened this issue Jan 26, 2025 · 0 comments
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DSL2 Prioritize for DSL2 implementation

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@cjfields
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We could add general support for screening sequences using Infermal or HMMER CMs or HMMs. I noticed this is done but in a more indirect manner in ampliseq using barrnap (which internally uses nhmmer and rRNA models).
@cjfields cjfields mentioned this issue Jan 27, 2025
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@cjfields cjfields added the DSL2 Prioritize for DSL2 implementation label Feb 4, 2025
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