Suggestions: Improving basal-body implementations

[hansenjn]

Some suggestions regarding basal bodies:

• The basal body detection does not always work, in particular for small cilia. This might be since the software searchers for basal body intensity within a radius of 3 micrometer around the ends of the skeleton. This radius could be reduced to better detect the correct basal body side in short cilia.
• It would be useful to add a function for detecting the basal body based on a segmented channel or spot detection method and quantifying basal body parameters like the intensity in the different channels.
• It could be also an option to add the basal body as the start of the ciliary intensity profile so that the transition zone would be mapped in the profile.