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fcn_train_dag.m
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fcn_train_dag.m
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function stats = fcn_train_dag(net, imdb, getBatch, TrainNum, varargin)
%CNN_TRAIN_DAG Demonstrates training a CNN using the DagNN wrapper
% CNN_TRAIN_DAG() is similar to CNN_TRAIN(), but works with
% the DagNN wrapper instead of the SimpleNN wrapper.
% Copyright (C) 2014-15 Andrea Vedaldi.
% All rights reserved.
%
% This file is part of the VLFeat library and is made available under
% the terms of the BSD license (see the COPYING file).
opts.expDir = fullfile('data','exp') ;
opts.continue = false ;
opts.batchSize = 256 ;
opts.numSubBatches = 1 ;
opts.train = [] ;
opts.val = [] ;
opts.gpus = [] ;
opts.prefetch = false ;
opts.numEpochs = 300 ;
opts.learningRate = 0.001 ;
opts.PolylearningRate=0.001;
opts.weightDecay = 0.0005 ;
opts.momentum = 0.9 ;
opts.derOutputs = {'objective', 1} ;
opts.memoryMapFile = fullfile(tempdir, 'matconvnet.bin') ;
opts.extractStatsFn = @extractStats ;
opts = vl_argparse(opts, varargin) ;
if ~exist(opts.expDir, 'dir'), mkdir(opts.expDir) ; end
if isempty(opts.train), opts.train = find(imdb.images.set==1) ; end
if isempty(opts.val), opts.val = find(imdb.images.set==2) ; end
if isnan(opts.train), opts.train = [] ; end
% -------------------------------------------------------------------------
% Initialization
% -------------------------------------------------------------------------
state.getBatch = getBatch ;
evaluateMode = isempty(opts.train) ;
if ~evaluateMode
if isempty(opts.derOutputs)
error('DEROUTPUTS must be specified when training.\n') ;
end
end
stats = [] ;
% setup GPUs
numGpus = numel(opts.gpus) ;
if numGpus > 1
if isempty(gcp('nocreate')),
parpool('local',numGpus) ;
spmd, gpuDevice(opts.gpus(labindex)), end
end
if exist(opts.memoryMapFile)
delete(opts.memoryMapFile) ;
end
elseif numGpus == 1
gpuDevice(opts.gpus)
end
% -------------------------------------------------------------------------
% Train and validate
% -------------------------------------------------------------------------
modelPath = @(ep) fullfile(opts.expDir, sprintf('net-epoch-%d.mat', ep));
modelFigPath = fullfile(opts.expDir, 'net-train.pdf') ;
start = opts.continue * findLastCheckpoint(opts.expDir) ;
if start >= 1
fprintf('resuming by loading epoch %d\n', start) ;
[net, stats] = loadState(modelPath(start)) ;
end
rng(0) ;
stream = RandStream('mrg32k3a','Seed',1);
streamOrig = RandStream.getGlobalStream();
%%
state.LrNo=start*TrainNum+1;
state.PolyLR=opts.PolylearningRate;
%%
for epoch=start+1:opts.numEpochs
set(stream,'Substream',epoch);
RandStream.setGlobalStream( stream );
% train one epoch
state.epoch = epoch ;
state.LrNo=(epoch-1)*TrainNum+1;
state.learningRate = opts.learningRate(min(epoch, numel(opts.learningRate))) ;
state.train = opts.train(randperm(numel(opts.train))) ; % shuffle
% state.train = [1:10] ; % shuffle
state.val = opts.val ;
state.imdb = imdb ;
fprintf('Random Check: %d %d %d\n', state.train(1), state.train(100), state.train(end));
if numGpus <= 1
stats.train(epoch) = process_epoch(net, state, opts, 'train',TrainNum) ;
stats.val(epoch) = process_epoch(net, state, opts, 'val',TrainNum) ;
else
savedNet = net.saveobj() ;
spmd
net_ = dagnn.DagNN.loadobj(savedNet) ;
stats_.train = process_epoch(net_, state, opts, 'train',TrainNum) ;
stats_.val = process_epoch(net_, state, opts, 'val',TrainNum) ;
if labindex == 1, savedNet_ = net_.saveobj() ; end
end
net = dagnn.DagNN.loadobj(savedNet_{1}) ;
stats__ = accumulateStats(stats_) ;
stats.train(epoch) = stats__.train ;
stats.val(epoch) = stats__.val ;
end
% save
if ~evaluateMode
saveState(modelPath(epoch), net, stats) ;
end
if mod(epoch,5)~=1
delete(modelPath(epoch-1)) ;
end
% figure(1) ; clf ;
% values = [] ;
% leg = {} ;
% for s = {'train', 'val'}
% s = char(s) ;
% for f = setdiff(fieldnames(stats.train)', {'num', 'time'})
% f = char(f) ;
% leg{end+1} = sprintf('%s (%s)', f, s) ;
% tmp = [stats.(s).(f)] ;
% values(end+1,:) = tmp(1,:)' ;
% end
% end
% subplot(1,2,1) ; plot(1:epoch, values') ;
% legend(leg{:}) ; xlabel('epoch') ; ylabel('metric') ;
% subplot(1,2,2) ; semilogy(1:epoch, values') ;
% legend(leg{:}) ; xlabel('epoch') ; ylabel('metric') ;
% grid on ;
% drawnow ;
% print(1, modelFigPath, '-dpdf') ;
RandStream.setGlobalStream( streamOrig );
end
% -------------------------------------------------------------------------
function stats = process_epoch(net, state, opts, mode, TrainNum)
% -------------------------------------------------------------------------
if strcmp(mode,'train')
state.momentum = num2cell(zeros(1, numel(net.params))) ;
end
numGpus = numel(opts.gpus) ;
if numGpus >= 1
net.move('gpu') ;
if strcmp(mode,'train')
sate.momentum = cellfun(@gpuArray,state.momentum,'UniformOutput',false) ;
end
end
if numGpus > 1
mmap = map_gradients(opts.memoryMapFile, net, numGpus) ;
else
mmap = [] ;
end
stats.time = 0 ;
stats.scores = [] ;
subset = state.(mode) ;
start = tic ;
num = 0 ;
for t=1:opts.batchSize:numel(subset)
batchSize = min(opts.batchSize, numel(subset) - t + 1) ;
for s=1:opts.numSubBatches
% get this image batch and prefetch the next
batchStart = t + (labindex-1) + (s-1) * numlabs ;
batchEnd = min(t+opts.batchSize-1, numel(subset)) ;
batch = subset(batchStart : opts.numSubBatches * numlabs : batchEnd) ;
num = num + numel(batch) ;
if numel(batch) == 0, continue ; end
inputs = state.getBatch(state.imdb, batch) ;
if opts.prefetch
if s == opts.numSubBatches
batchStart = t + (labindex-1) + opts.batchSize ;
batchEnd = min(t+2*opts.batchSize-1, numel(subset)) ;
else
batchStart = batchStart + numlabs ;
end
nextBatch = subset(batchStart : opts.numSubBatches * numlabs : batchEnd) ;
state.getBatch(state.imdb, nextBatch) ;
end
if strcmp(mode, 'train')
net.accumulateParamDers = (s ~= 1) ;
net.eval(inputs, opts.derOutputs) ;
else
% b=gpuArray(ones(1000,1000,1000));
net.eval(inputs) ;
% clear b;
end
end
% extract learning stats
stats = opts.extractStatsFn(net) ;
% accumulate gradient
if strcmp(mode, 'train')
if ~isempty(mmap)
write_gradients(mmap, net) ;
labBarrier() ;
end
state = accumulate_gradients(state, net, opts, batchSize,TrainNum, mmap) ;
end
% print learning statistics
time = toc(start) ;
stats.num = num ;
stats.time = toc(start) ;
if t == 1 || mod(t-1,batchSize*10) == 0
fprintf('%s: epoch %02d: %3d/%3d: %.1f Hz', ...
mode, ...
state.epoch, ...
max(1,fix(t/opts.batchSize)), ceil(numel(subset)/opts.batchSize), ...
stats.num/stats.time * max(numGpus, 1)) ;
for f = setdiff(fieldnames(stats)', {'num', 'time'})
f = char(f) ;
fprintf(' %s:', f) ;
fprintf(' %.3f', stats.(f)) ;
end
fprintf('\n') ;
end
end
fprintf('Overall statistics for epoch %02d: ', state.epoch)
for f = setdiff(fieldnames(stats)', {'num', 'time'})
f = char(f) ;
fprintf(' %s:', f) ;
fprintf(' %.3f', stats.(f)) ;
end
fprintf('\n') ;
net.reset() ;
net.move('cpu') ;
% -------------------------------------------------------------------------
function state = accumulate_gradients(state, net, opts, batchSize, TrainNum, mmap)
% -------------------------------------------------------------------------
state.learningRate=state.PolyLR(state.LrNo);
if mod(state.LrNo,TrainNum)== 1 || mod(state.LrNo,1000)== 0
fprintf('Iterations : %d ,PolyLeraningRate %d \n',state.LrNo , state.learningRate);
end
state.LrNo=state.LrNo+1;
for i=1:numel(net.params)
thisDecay = opts.weightDecay * net.params(i).weightDecay ;
thisLR = state.learningRate * net.params(i).learningRate ;
if ~isempty(mmap)
tmp = zeros(size(mmap.Data(labindex).(net.params(i).name)), 'single') ;
for g = setdiff(1:numel(mmap.Data), labindex)
tmp = tmp + mmap.Data(g).(net.params(i).name) ;
end
net.params(i).der = net.params(i).der + tmp ;
end
state.momentum{i} = opts.momentum * state.momentum{i} ...
- thisDecay * net.params(i).value ...
- (1 / batchSize) * net.params(i).der ;
net.params(i).value = net.params(i).value + thisLR * state.momentum{i} ;
net.params(i).der=[];
end
% -------------------------------------------------------------------------
function mmap = map_gradients(fname, net, numGpus)
% -------------------------------------------------------------------------
format = {} ;
for i=1:numel(net.params)
format(end+1,1:3) = {'single', size(net.params(i).value), net.params(i).name} ;
end
format(end+1,1:3) = {'double', [3 1], 'errors'} ;
if ~exist(fname) && (labindex == 1)
f = fopen(fname,'wb') ;
for g=1:numGpus
for i=1:size(format,1)
fwrite(f,zeros(format{i,2},format{i,1}),format{i,1}) ;
end
end
fclose(f) ;
end
labBarrier() ;
mmap = memmapfile(fname, 'Format', format, 'Repeat', numGpus, 'Writable', true) ;
% -------------------------------------------------------------------------
function write_gradients(mmap, net)
% -------------------------------------------------------------------------
for i=1:numel(net.params)
mmap.Data(labindex).(net.params(i).name) = gather(net.params(i).der) ;
end
% -------------------------------------------------------------------------
function stats = accumulateStats(stats_)
% -------------------------------------------------------------------------
stats = struct() ;
for s = {'train', 'val'}
s = char(s) ;
total = 0 ;
for g = 1:numel(stats_)
stats__ = stats_{g} ;
num__ = stats__.(s).num ;
total = total + num__ ;
for f = setdiff(fieldnames(stats__.(s))', 'num')
f = char(f) ;
if g == 1
stats.(s).(f) = 0 ;
end
stats.(s).(f) = stats.(s).(f) + stats__.(s).(f) * num__ ;
if g == numel(stats_)
stats.(s).(f) = stats.(s).(f) / total ;
end
end
end
stats.(s).num = total ;
end
% -------------------------------------------------------------------------
function stats = extractStats(net)
% -------------------------------------------------------------------------
sel = find(cellfun(@(x) isa(x,'dagnn.Loss'), {net.layers.block})) ;
stats = struct() ;
for i = 1:numel(sel)
stats.(net.layers(sel(i)).outputs{1}) = net.layers(sel(i)).block.average ;
end
% -------------------------------------------------------------------------
function saveState(fileName, net, stats)
% -------------------------------------------------------------------------
net_ = net ;
net = net_.saveobj() ;
save(fileName, 'net', 'stats') ;
% -------------------------------------------------------------------------
function [net, stats] = loadState(fileName)
% -------------------------------------------------------------------------
load(fileName, 'net', 'stats') ;
net = dagnn.DagNN.loadobj(net) ;
% -------------------------------------------------------------------------
function epoch = findLastCheckpoint(modelDir)
% -------------------------------------------------------------------------
list = dir(fullfile(modelDir, 'net-epoch-*.mat')) ;
tokens = regexp({list.name}, 'net-epoch-([\d]+).mat', 'tokens') ;
epoch = cellfun(@(x) sscanf(x{1}{1}, '%d'), tokens) ;
epoch = max([epoch 0]) ;