forked from thelovelab/tximport
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathDESCRIPTION
26 lines (25 loc) · 902 Bytes
/
DESCRIPTION
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
Package: tximport
Version: 0.99.2
Title: Import and summarize transcript-level estimates for gene-level analysis
Description: Imports transcript-level abundance, estimated counts and
transcript lengths, and summarizes into matrices for use with downstream
gene-level analysis packages. Average transcript length, weighted by
sample-specific transcript abundance estimates, is provided as a matrix
which can be used as an offset for different expression of
gene-level counts.
Author: Michael Love, Charlotte Soneson, Mark Robinson
Maintainer: Michael Love <[email protected]>
License: GPL (>=2)
VignetteBuilder: knitr
Imports: utils
Suggests:
knitr,
testthat,
tximportData,
TxDb.Hsapiens.UCSC.hg19.knownGene,
readr (>= 0.2.2),
limma,
edgeR,
DESeq2 (>= 1.11.6)
biocViews: RNASeq, Transcription, GeneExpression, DataImport
RoxygenNote: 5.0.1