diff --git a/Readme.md b/Readme.md index a08b855..7ce1c68 100644 --- a/Readme.md +++ b/Readme.md @@ -2,9 +2,15 @@ A rarefaction software written in C++11 to rarefy large high count datasets quickly and return diversity measures. # Installation -The easiest way is to install from bioconda (https://anaconda.org/bioconda/rtk) using "conda install -c bioconda rtk". -For use in R, use "install.packages("rtk")". +![Miniconda](https://anaconda.org/bioconda/rtk/badges/installer/conda.svg) +![Date](https://anaconda.org/bioconda/rtk/badges/latest_release_date.svg) + +The easiest way is to install from [Miniconda](https://docs.conda.io/en/latest/miniconda.html) (see [rtk package](https://anaconda.org/bioconda/rtk)) using: + + conda install -c bioconda rtk + +For use in R, use `install.packages("rtk")`. Otherwise, download RTK from https://github.com/hildebra/Rarefaction/releases or compile from source. @@ -132,7 +138,7 @@ ls -lh test.* ``` # Citation -If you use RTK in a publication, please consider citing the Bioinformatics application note at: https://academic.oup.com/bioinformatics/article/3111845/RTK-efficient-rarefaction-analysis-of-large +If you use RTK in a publication, please consider citing the Bioinformatics application note at: https://academic.oup.com/bioinformatics/article/3111845/RTK-efficient-rarefaction-analysis-of-large > Saary, Paul, et al. "RTK: efficient rarefaction analysis of large datasets." > Bioinformatics (2017)