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CHANGELOG.md

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Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog and this project adheres to Semantic Versioning.

0.11.7 - 2020-06-19

Changed

  • Workshop materials are loaded for 3.6.1 and 3.6.3 from their respective directories
  • RPM writes out version file so it can be shown in the UI

0.11.6 - 2020-05-22

Changed

  • Workshop materials are available for 3.6.1 and 3.6.3.

0.11.5 - 2020-05-20

Changed

  • removed the way env gets written and read. It didnt work due to wrong paths and when it could find the file, it is not formatted correctly besides.

Added

loads R_LIBS_SITE environment variable if it is set.

0.11.4 - 2020-03-31

Fixed

  • Fixed switch statement in submit

0.11.3 - 2020-03-30

Fixed

  • submit.yml.erb actually submits to gpu nodes.

0.11.2 - 2020-03-25

Added

  • R version 3.6.3 can now use GPU nodes

0.11.1 - 2020-03-24

Changed

  • Gitlab ci uses clone instead of fetch

0.11.0 - 2020-03-24

Added

  • Added R version 3.6.3 which is now a module supplied by SciApps that has all the dependencies

Changed

  • Moved texlive module to the form.yml because moving forward it is being included in the module itself.

0.10.0 - 2020-01-13

Added

  • Added loading the texlive module so users can create and save Markdown R files.

0.9.1 - 2020-01-02

Fixed

  • Fixed bug where workshop mode would not be activated when requested

Changed

  • Changed label for workshop mode to better describe the sandbox

0.9.0 - 2020-01-02

Added

  • Added JS to ensure that the tutorial control is only shown if R version 3.6.1 is selected
  • Workshop mode sets a custom R_LIBS_USER

0.8.8 - 2019-12-20

Fixed

  • Fix breaking changes with the way Singularity 3.5.x handles environment variables

0.8.7 - 2019-12-17

Fixed

  • Fixed bug which prevented running simultaneous tutorial sessions

0.8.6 - 2019-12-09

Fixed

  • Fixed bug where RStudio's history was not cleared when tutorial mode was selected

0.8.5 - 2019-12-04

Added

  • Added R 3.6.1
  • Added controls to access tutorial materials

0.8.4 - 2019-10-11

Changed

  • Removed hardcoded fix that shadowed the module variables

0.8.3 - 2019-10-10

Fixed

  • Fixed crash relating to duplicate bind mounts including /etc caused by OSC singularity.conf

0.8.2 - 2019-06-28

Added

  • Added import of xalt to improve software metrics

Fixed

  • Fixed incompatibilities with older R's and newer Intels

0.8.1 - 2019-06-26

Fixed

  • Fixed load ordering of mkl module

0.8.0 - 2019-06-18

Added

  • Added R 3.6.0

0.7.0 - 2019-04-26

Changed

  • Changed Intel compiler version from 16.0.3 to 18.0.3

0.6.2 - 2018-02-21

Changed

  • Replace the Proot dependency with Singularity

Fixed

  • Fix the PPN frontend behavior to permit a blank field

0.6.1 - 2018-01-09

Added

  • JS to enforce the PPN limits per node type

0.6.0 - 2018-08-02

Added

  • A method to optionally set non-standard versions of R to be used with RStudio Server.
  • Added R 3.5.0 as an option

0.5.0 - 2018-04-18

Added

  • Added debug queue as an option.
  • Users can now specify number of cores on the node.

Changed

  • Changed server timeout to 120 seconds to account for running on shared node.

0.4.0 - 2018-03-28

Added

  • Add support for using a Singularity image.

Changed

  • Changed "Account" label to "Project".
  • Changed icon that appears in the "Connect" button.

0.3.0 - 2018-01-31

Added

  • Added support for R 3.4.2 alongside 3.3.2 on Owens. #3

Updated

  • Updated the date in LICENSE.txt.

Security

  • Fixed permissions on generated script with env vars inside.

0.2.1 - 2017-10-20

Changed

  • Moved account input field to top of form.

0.2.0 - 2017-10-17

Added

  • Wrapper script used to launch rsession in similar environment as original batch job. #8

Changed

  • Modified app to take advantage of ERB templates in updated Dashboard.

Fixed

  • Removed need for message to user about waiting for server to start. #6

0.1.1 - 2017-10-11

Changed

  • Changed the CHANGELOG.md formatting.

Removed

  • Removed number of nodes option. #7

0.1.0 - 2017-06-14

Changed

  • Refactored for the new Batch Connect app API.

0.0.2 - 2017-05-02

Changed

  • Set proot as an external dependency.
  • Use system-installed proot.

0.0.1 - 2017-01-20

Added

  • Initial release!