From 567b78a8f7035cd3934c8ddd13748d95a5262516 Mon Sep 17 00:00:00 2001 From: "Jeremy R. Easton-Marks" Date: Wed, 16 Dec 2015 12:26:50 -0600 Subject: [PATCH] Javadoc --- javadoc/allclasses-frame.html | 11 +- javadoc/allclasses-noframe.html | 11 +- javadoc/constant-values.html | 4 +- javadoc/deprecated-list.html | 4 +- .../dbmi/bd2k/irct/ri/exac/EXACDataType.html | 373 +++++++++++ .../ri/exac/EXACOntologyRelationship.html | 354 ++++++++++ .../dbmi/bd2k/irct/ri/exac/EXACResource.html | 254 +++++++ .../ri/exac/EXACResourceImplementation.html | 620 ++++++++++++++++++ .../irct/ri/exac/class-use/EXACDataType.html | 173 +++++ .../class-use/EXACOntologyRelationship.html | 173 +++++ .../irct/ri/exac/class-use/EXACResource.html | 124 ++++ .../class-use/EXACResourceImplementation.html | 124 ++++ .../dbmi/bd2k/irct/ri/exac/package-frame.html | 26 + .../bd2k/irct/ri/exac/package-summary.html | 169 +++++ .../dbmi/bd2k/irct/ri/exac/package-tree.html | 155 +++++ .../dbmi/bd2k/irct/ri/exac/package-use.html | 162 +++++ .../FakeOntologyRelationship.html | 4 +- .../irct/ri/fakeResource/FakeResource.html | 6 +- .../FakeResourceImplementationDOB.html | 69 +- .../FakeResourceImplementationName.html | 69 +- .../class-use/FakeOntologyRelationship.html | 4 +- .../fakeResource/class-use/FakeResource.html | 4 +- .../FakeResourceImplementationDOB.html | 4 +- .../FakeResourceImplementationName.html | 4 +- .../irct/ri/fakeResource/package-frame.html | 4 +- .../irct/ri/fakeResource/package-summary.html | 8 +- .../irct/ri/fakeResource/package-tree.html | 8 +- .../irct/ri/fakeResource/package-use.html | 4 +- .../ri/i2b2/I2B2OntologyRelationship.html | 4 +- .../dbmi/bd2k/irct/ri/i2b2/I2B2Resource.html | 6 +- .../i2b2/I2B2XMLResourceImplementation.html | 87 ++- .../class-use/I2B2OntologyRelationship.html | 4 +- .../irct/ri/i2b2/class-use/I2B2Resource.html | 4 +- .../I2B2XMLResourceImplementation.html | 29 +- .../dbmi/bd2k/irct/ri/i2b2/package-frame.html | 4 +- .../bd2k/irct/ri/i2b2/package-summary.html | 4 +- .../dbmi/bd2k/irct/ri/i2b2/package-tree.html | 4 +- .../dbmi/bd2k/irct/ri/i2b2/package-use.html | 26 +- .../I2B2TranSMARTResourceImplementation.html | 59 +- .../i2b2transmart/I2B2tranSMARTResource.html | 6 +- .../I2B2TranSMARTResourceImplementation.html | 4 +- .../class-use/I2B2tranSMARTResource.html | 4 +- .../irct/ri/i2b2transmart/package-frame.html | 4 +- .../ri/i2b2transmart/package-summary.html | 8 +- .../irct/ri/i2b2transmart/package-tree.html | 8 +- .../irct/ri/i2b2transmart/package-use.html | 4 +- ...ranSMARTVariantResourceImplementation.html | 401 +++++++++++ .../I2B2tranSMARTVariantResource.html | 254 +++++++ ...ranSMARTVariantResourceImplementation.html | 124 ++++ .../I2B2tranSMARTVariantResource.html | 124 ++++ .../i2b2transmartvariant/package-frame.html | 21 + .../i2b2transmartvariant/package-summary.html | 151 +++++ .../ri/i2b2transmartvariant/package-tree.html | 146 +++++ .../ri/i2b2transmartvariant/package-use.html | 124 ++++ .../bd2k/irct/ri/openCPU/OpenCPUResource.html | 6 +- .../OpenCPUResourceImplementation.html | 62 +- .../ri/openCPU/class-use/OpenCPUResource.html | 4 +- .../OpenCPUResourceImplementation.html | 4 +- .../bd2k/irct/ri/openCPU/package-frame.html | 4 +- .../bd2k/irct/ri/openCPU/package-summary.html | 8 +- .../bd2k/irct/ri/openCPU/package-tree.html | 8 +- .../bd2k/irct/ri/openCPU/package-use.html | 4 +- javadoc/help-doc.html | 4 +- javadoc/index-files/index-1.html | 54 +- javadoc/index-files/index-2.html | 46 +- javadoc/index-files/index-3.html | 132 +++- javadoc/index-files/index-4.html | 113 +--- javadoc/index-files/index-5.html | 44 +- javadoc/index-files/index-6.html | 46 +- javadoc/index-files/index-7.html | 52 +- javadoc/index-files/index-8.html | 50 +- javadoc/index-files/index-9.html | 70 +- javadoc/index.html | 2 +- javadoc/overview-frame.html | 7 +- javadoc/overview-summary.html | 10 +- javadoc/overview-tree.html | 22 +- javadoc/package-list | 3 +- 77 files changed, 4786 insertions(+), 508 deletions(-) create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACDataType.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACOntologyRelationship.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACResource.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACResourceImplementation.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACDataType.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACOntologyRelationship.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACResource.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACResourceImplementation.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-frame.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-summary.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-tree.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-use.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmartvariant/I2B2TranSMARTVariantResourceImplementation.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmartvariant/I2B2tranSMARTVariantResource.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmartvariant/class-use/I2B2TranSMARTVariantResourceImplementation.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmartvariant/class-use/I2B2tranSMARTVariantResource.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmartvariant/package-frame.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmartvariant/package-summary.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmartvariant/package-tree.html create mode 100644 javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmartvariant/package-use.html diff --git a/javadoc/allclasses-frame.html b/javadoc/allclasses-frame.html index 8830294..4571aa3 100644 --- a/javadoc/allclasses-frame.html +++ b/javadoc/allclasses-frame.html @@ -2,9 +2,9 @@ - + All Classes - + @@ -12,6 +12,10 @@

All Classes

diff --git a/javadoc/allclasses-noframe.html b/javadoc/allclasses-noframe.html index c66d0cf..8c9d183 100644 --- a/javadoc/allclasses-noframe.html +++ b/javadoc/allclasses-noframe.html @@ -2,9 +2,9 @@ - + All Classes - + @@ -12,6 +12,10 @@

All Classes

diff --git a/javadoc/constant-values.html b/javadoc/constant-values.html index 8a573b3..8f6c868 100644 --- a/javadoc/constant-values.html +++ b/javadoc/constant-values.html @@ -2,9 +2,9 @@ - + Constant Field Values - + diff --git a/javadoc/deprecated-list.html b/javadoc/deprecated-list.html index 1a69c23..634b0aa 100644 --- a/javadoc/deprecated-list.html +++ b/javadoc/deprecated-list.html @@ -2,9 +2,9 @@ - + Deprecated List - + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACDataType.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACDataType.html new file mode 100644 index 0000000..dcc6c51 --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACDataType.html @@ -0,0 +1,373 @@ + + + + + +EXACDataType + + + + + + + + +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+
+ + +
+ + +
+ + +
+
edu.harvard.hms.dbmi.bd2k.irct.ri.exac
+

Enum EXACDataType

+
+
+ +
+
    +
  • +
    +
    All Implemented Interfaces:
    +
    edu.harvard.hms.dbmi.bd2k.irct.model.ontology.DataType, java.io.Serializable, java.lang.Comparable<EXACDataType>
    +
    +
    +
    +
    public enum EXACDataType
+extends java.lang.Enum<EXACDataType>
+implements edu.harvard.hms.dbmi.bd2k.irct.model.ontology.DataType
    +
    • +
+
+
+
    +
  • + + + +
      +
    • + + +

      Method Summary

      + + + + + + + + + + + + + + +
      All Methods Static Methods Concrete Methods 
      Modifier and TypeMethod and Description
      static EXACDataTypevalueOf(java.lang.String name) +
      Returns the enum constant of this type with the specified name.
      +
      static EXACDataType[]values() +
      Returns an array containing the constants of this enum type, in +the order they are declared.
      +
      +
        +
      • + + +

        Methods inherited from class java.lang.Enum

        +compareTo, equals, getDeclaringClass, hashCode, name, ordinal, toString, valueOf
        • +
      +
        +
      • + + +

        Methods inherited from class java.lang.Object

        +getClass, notify, notifyAll, wait, wait, wait
        • +
      +
        +
      • + + +

        Methods inherited from interface edu.harvard.hms.dbmi.bd2k.irct.model.ontology.DataType

        +fromBytes, toBytes
        • +
      +
      • +
    +
    • +
+
+
+
    +
  • + + + +
      +
    • + + +

      Method Detail

      + + + +
        +
      • +

        values

        +
        public static EXACDataType[] values()
        +
        Returns an array containing the constants of this enum type, in +the order they are declared. This method may be used to iterate +over the constants as follows: +
        +for (EXACDataType c : EXACDataType.values())
+    System.out.println(c);
+
        +
        +
        Returns:
        +
        an array containing the constants of this enum type, in the order they are declared
        +
        +
        • +
      + + + +
        +
      • +

        valueOf

        +
        public static EXACDataType valueOf(java.lang.String name)
        +
        Returns the enum constant of this type with the specified name. +The string must match exactly an identifier used to declare an +enum constant in this type. (Extraneous whitespace characters are +not permitted.)
        +
        +
        Parameters:
        +
        name - the name of the enum constant to be returned.
        +
        Returns:
        +
        the enum constant with the specified name
        +
        Throws:
        +
        java.lang.IllegalArgumentException - if this enum type has no constant with the specified name
        +
        java.lang.NullPointerException - if the argument is null
        +
        +
        • +
      +
      • +
    +
    • +
+
+
+ + +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+
+ + +
+ + +
+ + + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACOntologyRelationship.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACOntologyRelationship.html new file mode 100644 index 0000000..6a8dc50 --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACOntologyRelationship.html @@ -0,0 +1,354 @@ + + + + + +EXACOntologyRelationship + + + + + + + + +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+
+ + +
+ + +
+ + +
+
edu.harvard.hms.dbmi.bd2k.irct.ri.exac
+

Enum EXACOntologyRelationship

+
+
+ +
+
    +
  • +
    +
    All Implemented Interfaces:
    +
    edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyRelationship, java.io.Serializable, java.lang.Comparable<EXACOntologyRelationship>
    +
    +
    +
    +
    public enum EXACOntologyRelationship
+extends java.lang.Enum<EXACOntologyRelationship>
+implements edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyRelationship
    +
    A list of relationships that the i2b2 implementation can use
    +
    +
    Author:
    +
    Jeremy R. Easton-Marks
    +
    +
    • +
+
+
+
    +
  • + +
      +
    • + + +

      Enum Constant Summary

      + + + + + + + + + + + +
      Enum Constants 
      Enum Constant and Description
      CHILD 
      PARENT 
      +
      • +
    + +
      +
    • + + +

      Method Summary

      + + + + + + + + + + + + + + +
      All Methods Static Methods Concrete Methods 
      Modifier and TypeMethod and Description
      static EXACOntologyRelationshipvalueOf(java.lang.String name) +
      Returns the enum constant of this type with the specified name.
      +
      static EXACOntologyRelationship[]values() +
      Returns an array containing the constants of this enum type, in +the order they are declared.
      +
      +
        +
      • + + +

        Methods inherited from class java.lang.Enum

        +compareTo, equals, getDeclaringClass, hashCode, name, ordinal, toString, valueOf
        • +
      +
        +
      • + + +

        Methods inherited from class java.lang.Object

        +getClass, notify, notifyAll, wait, wait, wait
        • +
      +
        +
      • + + +

        Methods inherited from interface edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyRelationship

        +getInverse
        • +
      +
      • +
    +
    • +
+
+
+
    +
  • + + + +
      +
    • + + +

      Method Detail

      + + + +
        +
      • +

        values

        +
        public static EXACOntologyRelationship[] values()
        +
        Returns an array containing the constants of this enum type, in +the order they are declared. This method may be used to iterate +over the constants as follows: +
        +for (EXACOntologyRelationship c : EXACOntologyRelationship.values())
+    System.out.println(c);
+
        +
        +
        Returns:
        +
        an array containing the constants of this enum type, in the order they are declared
        +
        +
        • +
      + + + +
        +
      • +

        valueOf

        +
        public static EXACOntologyRelationship valueOf(java.lang.String name)
        +
        Returns the enum constant of this type with the specified name. +The string must match exactly an identifier used to declare an +enum constant in this type. (Extraneous whitespace characters are +not permitted.)
        +
        +
        Parameters:
        +
        name - the name of the enum constant to be returned.
        +
        Returns:
        +
        the enum constant with the specified name
        +
        Throws:
        +
        java.lang.IllegalArgumentException - if this enum type has no constant with the specified name
        +
        java.lang.NullPointerException - if the argument is null
        +
        +
        • +
      +
      • +
    +
    • +
+
+
+ + +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+
+ + +
+ + +
+ + + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACResource.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACResource.html new file mode 100644 index 0000000..1115a00 --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACResource.html @@ -0,0 +1,254 @@ + + + + + +EXACResource + + + + + + + + +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+
+
    +
  • Summary: 
    • +
  • Nested | 
    • +
  • Field | 
    • +
  • Constr | 
    • +
  • Method
    • +
+
    +
  • Detail: 
    • +
  • Field | 
    • +
  • Constr | 
    • +
  • Method
    • +
+
+ + +
+ + +
+
edu.harvard.hms.dbmi.bd2k.irct.ri.exac
+

Class EXACResource

+
+
+ +
+
    +
  • +
    +
    +
    public class EXACResource
+extends edu.harvard.hms.dbmi.bd2k.irct.model.resource.Resource
    +
    A Base exAC Resource that can be implemented as a separate resource
    +
    +
    Author:
    +
    Jeremy R. Easton-Marks
    +
    +
    • +
+
+
+
    +
  • + +
      +
    • + + +

      Constructor Summary

      + + + + + + + + +
      Constructors 
      Constructor and Description
      EXACResource() 
      +
      • +
    + +
      +
    • + + +

      Method Summary

      +
        +
      • + + +

        Methods inherited from class edu.harvard.hms.dbmi.bd2k.irct.model.resource.Resource

        +getAvailableProcesses, getId, getImplementingInterface, getName, getOntologyType, getParameters, getSupportedJoins, getSupportedPredicates, setAvailableProcesses, setId, setImplementingInterface, setName, setOntologyType, setParameters, setSupportedJoins, setSupportedPredicates, setup, toJson, toJson
        • +
      +
        +
      • + + +

        Methods inherited from class java.lang.Object

        +equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
        • +
      +
      • +
    +
    • +
+
+
+
    +
  • + +
      +
    • + + +

      Constructor Detail

      + + + +
        +
      • +

        EXACResource

        +
        public EXACResource()
        +
        • +
      +
      • +
    +
    • +
+
+
+ + +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+
+
    +
  • Summary: 
    • +
  • Nested | 
    • +
  • Field | 
    • +
  • Constr | 
    • +
  • Method
    • +
+
    +
  • Detail: 
    • +
  • Field | 
    • +
  • Constr | 
    • +
  • Method
    • +
+
+ + +
+ + + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACResourceImplementation.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACResourceImplementation.html new file mode 100644 index 0000000..0cdab24 --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/EXACResourceImplementation.html @@ -0,0 +1,620 @@ + + + + + +EXACResourceImplementation + + + + + + + + +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+
+
    +
  • Summary: 
    • +
  • Nested | 
    • +
  • Field | 
    • +
  • Constr | 
    • +
  • Method
    • +
+ +
+ + +
+ + +
+
edu.harvard.hms.dbmi.bd2k.irct.ri.exac
+

Class EXACResourceImplementation

+
+
+ +
+
    +
  • +
    +
    All Implemented Interfaces:
    +
    edu.harvard.hms.dbmi.bd2k.irct.model.resource.PathResourceImplementationInterface, edu.harvard.hms.dbmi.bd2k.irct.model.resource.ProcessResourceImplementationInterface, edu.harvard.hms.dbmi.bd2k.irct.model.resource.QueryResourceImplementationInterface, edu.harvard.hms.dbmi.bd2k.irct.model.resource.ResourceImplementationInterface
    +
    +
    +
    +
    public class EXACResourceImplementation
+extends java.lang.Object
+implements edu.harvard.hms.dbmi.bd2k.irct.model.resource.QueryResourceImplementationInterface, edu.harvard.hms.dbmi.bd2k.irct.model.resource.PathResourceImplementationInterface, edu.harvard.hms.dbmi.bd2k.irct.model.resource.ProcessResourceImplementationInterface
    +
    • +
+
+
+
    +
  • + + + +
      +
    • + + +

      Method Summary

      + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
      All Methods Instance Methods Concrete Methods 
      Modifier and TypeMethod and Description
      java.lang.BooleaneditableReturnEntity() 
      org.apache.http.client.HttpClientgetClient() 
      edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyTypegetOntologyType() 
      edu.harvard.hms.dbmi.bd2k.irct.model.ontology.PathgetPathFromString(java.lang.String path) 
      java.util.List<edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path>getPathRelationship(edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path path, + edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyRelationship relationship) 
      java.util.List<edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path>getPathRoot() 
      edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyRelationshipgetRelationshipFromString(java.lang.String relationship) 
      edu.harvard.hms.dbmi.bd2k.irct.model.result.ResultSetgetResults(edu.harvard.hms.dbmi.bd2k.irct.model.action.ActionState actionState) 
      java.util.List<edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path>getReturnEntity() 
      java.lang.StringgetServerURL() 
      edu.harvard.hms.dbmi.bd2k.irct.model.resource.ResourceStategetState() 
      java.lang.StringgetType() 
      java.util.List<edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyRelationship>relationships() 
      edu.harvard.hms.dbmi.bd2k.irct.model.action.ActionStaterunProcess(edu.harvard.hms.dbmi.bd2k.irct.model.process.IRCTProcess pep) 
      edu.harvard.hms.dbmi.bd2k.irct.model.action.ActionStaterunQuery(edu.harvard.hms.dbmi.bd2k.irct.model.query.Query qep) 
      voidsetClient(org.apache.http.client.HttpClient client) 
      voidsetServerURL(java.lang.String serverURL) 
      voidsetup(java.util.Map<java.lang.String,java.lang.String> parameters) 
      javax.json.JsonObjecttoJson() 
      javax.json.JsonObjecttoJson(int depth) 
      +
        +
      • + + +

        Methods inherited from class java.lang.Object

        +equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
        • +
      +
      • +
    +
    • +
+
+
+
    +
  • + +
      +
    • + + +

      Constructor Detail

      + + + +
        +
      • +

        EXACResourceImplementation

        +
        public EXACResourceImplementation()
        +
        • +
      +
      • +
    + +
      +
    • + + +

      Method Detail

      + + + +
        +
      • +

        setup

        +
        public void setup(java.util.Map<java.lang.String,java.lang.String> parameters)
        +
        +
        Specified by:
        +
        setup in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.ResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        getType

        +
        public java.lang.String getType()
        +
        +
        Specified by:
        +
        getType in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.ResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        toJson

        +
        public javax.json.JsonObject toJson()
        +
        +
        Specified by:
        +
        toJson in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.ResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        toJson

        +
        public javax.json.JsonObject toJson(int depth)
        +
        +
        Specified by:
        +
        toJson in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.ResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        getPathRoot

        +
        public java.util.List<edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path> getPathRoot()
        +
        +
        Specified by:
        +
        getPathRoot in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.PathResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        relationships

        +
        public java.util.List<edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyRelationship> relationships()
        +
        +
        Specified by:
        +
        relationships in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.PathResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        getRelationshipFromString

        +
        public edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyRelationship getRelationshipFromString(java.lang.String relationship)
        +
        +
        Specified by:
        +
        getRelationshipFromString in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.PathResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        getPathRelationship

        +
        public java.util.List<edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path> getPathRelationship(edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path path,
+                                                                                              edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyRelationship relationship)
+                                                                                       throws edu.harvard.hms.dbmi.bd2k.irct.exception.ResourceInterfaceException
        +
        +
        Specified by:
        +
        getPathRelationship in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.PathResourceImplementationInterface
        +
        Throws:
        +
        edu.harvard.hms.dbmi.bd2k.irct.exception.ResourceInterfaceException
        +
        +
        • +
      + + + +
        +
      • +

        getOntologyType

        +
        public edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyType getOntologyType()
        +
        +
        Specified by:
        +
        getOntologyType in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.PathResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        getPathFromString

        +
        public edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path getPathFromString(java.lang.String path)
        +
        +
        Specified by:
        +
        getPathFromString in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.PathResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        runQuery

        +
        public edu.harvard.hms.dbmi.bd2k.irct.model.action.ActionState runQuery(edu.harvard.hms.dbmi.bd2k.irct.model.query.Query qep)
+                                                                 throws edu.harvard.hms.dbmi.bd2k.irct.exception.ResourceInterfaceException
        +
        +
        Specified by:
        +
        runQuery in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.QueryResourceImplementationInterface
        +
        Throws:
        +
        edu.harvard.hms.dbmi.bd2k.irct.exception.ResourceInterfaceException
        +
        +
        • +
      + + + +
        +
      • +

        runProcess

        +
        public edu.harvard.hms.dbmi.bd2k.irct.model.action.ActionState runProcess(edu.harvard.hms.dbmi.bd2k.irct.model.process.IRCTProcess pep)
        +
        +
        Specified by:
        +
        runProcess in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.ProcessResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        getResults

        +
        public edu.harvard.hms.dbmi.bd2k.irct.model.result.ResultSet getResults(edu.harvard.hms.dbmi.bd2k.irct.model.action.ActionState actionState)
+                                                                 throws edu.harvard.hms.dbmi.bd2k.irct.exception.ResourceInterfaceException
        +
        +
        Specified by:
        +
        getResults in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.ProcessResourceImplementationInterface
        +
        Specified by:
        +
        getResults in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.QueryResourceImplementationInterface
        +
        Throws:
        +
        edu.harvard.hms.dbmi.bd2k.irct.exception.ResourceInterfaceException
        +
        +
        • +
      + + + +
        +
      • +

        getState

        +
        public edu.harvard.hms.dbmi.bd2k.irct.model.resource.ResourceState getState()
        +
        +
        Specified by:
        +
        getState in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.ProcessResourceImplementationInterface
        +
        Specified by:
        +
        getState in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.QueryResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        getReturnEntity

        +
        public java.util.List<edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path> getReturnEntity()
        +
        +
        Specified by:
        +
        getReturnEntity in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.QueryResourceImplementationInterface
        +
        Specified by:
        +
        getReturnEntity in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.ResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        editableReturnEntity

        +
        public java.lang.Boolean editableReturnEntity()
        +
        +
        Specified by:
        +
        editableReturnEntity in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.QueryResourceImplementationInterface
        +
        +
        • +
      + + + +
        +
      • +

        getClient

        +
        public org.apache.http.client.HttpClient getClient()
        +
        +
        Returns:
        +
        the client
        +
        +
        • +
      + + + +
        +
      • +

        setClient

        +
        public void setClient(org.apache.http.client.HttpClient client)
        +
        +
        Parameters:
        +
        client - the client to set
        +
        +
        • +
      + + + +
        +
      • +

        getServerURL

        +
        public java.lang.String getServerURL()
        +
        +
        Returns:
        +
        the serverURL
        +
        +
        • +
      + + + +
        +
      • +

        setServerURL

        +
        public void setServerURL(java.lang.String serverURL)
        +
        +
        Parameters:
        +
        serverURL - the serverURL to set
        +
        +
        • +
      +
      • +
    +
    • +
+
+
+ + +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+
+
    +
  • Summary: 
    • +
  • Nested | 
    • +
  • Field | 
    • +
  • Constr | 
    • +
  • Method
    • +
+ +
+ + +
+ + + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACDataType.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACDataType.html new file mode 100644 index 0000000..08e0c90 --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACDataType.html @@ -0,0 +1,173 @@ + + + + + +Uses of Class edu.harvard.hms.dbmi.bd2k.irct.ri.exac.EXACDataType + + + + + + + + +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+ + +
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+

Uses of Class
edu.harvard.hms.dbmi.bd2k.irct.ri.exac.EXACDataType

+
+
+ +
+ +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+ + +
+ + + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACOntologyRelationship.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACOntologyRelationship.html new file mode 100644 index 0000000..d0f8a9b --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACOntologyRelationship.html @@ -0,0 +1,173 @@ + + + + + +Uses of Class edu.harvard.hms.dbmi.bd2k.irct.ri.exac.EXACOntologyRelationship + + + + + + + + +
+ + +
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+ + + + +
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+ + + +
+ +
+ + +
+ +
+

Uses of Class
edu.harvard.hms.dbmi.bd2k.irct.ri.exac.EXACOntologyRelationship

+
+
+ +
+ +
+ + +
Skip navigation links
+ + + + +
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+ + + +
+ +
+ + +
+ + + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACResource.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACResource.html new file mode 100644 index 0000000..24d3e08 --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACResource.html @@ -0,0 +1,124 @@ + + + + + +Uses of Class edu.harvard.hms.dbmi.bd2k.irct.ri.exac.EXACResource + + + + + + + + +
+ + +
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+

Uses of Class
edu.harvard.hms.dbmi.bd2k.irct.ri.exac.EXACResource

+
+
No usage of edu.harvard.hms.dbmi.bd2k.irct.ri.exac.EXACResource
+ +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+ + +
+ + + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACResourceImplementation.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACResourceImplementation.html new file mode 100644 index 0000000..2925746 --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/class-use/EXACResourceImplementation.html @@ -0,0 +1,124 @@ + + + + + +Uses of Class edu.harvard.hms.dbmi.bd2k.irct.ri.exac.EXACResourceImplementation + + + + + + + + +
+ + +
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Uses of Class
edu.harvard.hms.dbmi.bd2k.irct.ri.exac.EXACResourceImplementation

+
+
No usage of edu.harvard.hms.dbmi.bd2k.irct.ri.exac.EXACResourceImplementation
+ +
+ + +
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+ + + + +
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+ + + +
+ +
+ + +
+ + + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-frame.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-frame.html new file mode 100644 index 0000000..145bb08 --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-frame.html @@ -0,0 +1,26 @@ + + + + + +edu.harvard.hms.dbmi.bd2k.irct.ri.exac + + + + + +

edu.harvard.hms.dbmi.bd2k.irct.ri.exac

+
+

Classes

+ +

Enums

+ +
+ + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-summary.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-summary.html new file mode 100644 index 0000000..b0844c0 --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-summary.html @@ -0,0 +1,169 @@ + + + + + +edu.harvard.hms.dbmi.bd2k.irct.ri.exac + + + + + + + + +
+ + +
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Package edu.harvard.hms.dbmi.bd2k.irct.ri.exac

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+ +
+ +
+ + +
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+ + + +
+ +
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+ + + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-tree.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-tree.html new file mode 100644 index 0000000..379f2c9 --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-tree.html @@ -0,0 +1,155 @@ + + + + + +edu.harvard.hms.dbmi.bd2k.irct.ri.exac Class Hierarchy + + + + + + + + +
+ + +
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+ + + + +
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+ + + +
+ +
+ + +
+ +
+

Hierarchy For Package edu.harvard.hms.dbmi.bd2k.irct.ri.exac

+Package Hierarchies: + +
+
+

Class Hierarchy

+ +

Enum Hierarchy

+ +
+ +
+ + +
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+ + + + +
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+ +
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+ + + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-use.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-use.html new file mode 100644 index 0000000..63ae96b --- /dev/null +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/exac/package-use.html @@ -0,0 +1,162 @@ + + + + + +Uses of Package edu.harvard.hms.dbmi.bd2k.irct.ri.exac + + + + + + + + +
+ + +
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+ + + + +
+
+ + + +
+ +
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+

Uses of Package
edu.harvard.hms.dbmi.bd2k.irct.ri.exac

+
+
+ +
+ +
+ + +
Skip navigation links
+ + + + +
+
+ + + +
+ +
+ + +
+ + + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/fakeResource/FakeOntologyRelationship.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/fakeResource/FakeOntologyRelationship.html index b6f10e5..e335d52 100644 --- a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/fakeResource/FakeOntologyRelationship.html +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/fakeResource/FakeOntologyRelationship.html @@ -2,9 +2,9 @@ - + FakeOntologyRelationship - + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/fakeResource/FakeResource.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/fakeResource/FakeResource.html index fe939a9..81c5d39 100644 --- a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/fakeResource/FakeResource.html +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/fakeResource/FakeResource.html @@ -2,9 +2,9 @@ - + FakeResource - + @@ -151,7 +151,7 @@

Method Summary

Methods inherited from class edu.harvard.hms.dbmi.bd2k.irct.model.resource.Resource

-getId, getImplementingInterface, getName, getOntologyType, getParameters, getSupportedJoins, getSupportedPredicates, setId, setImplementingInterface, setName, setOntologyType, setParameters, setSupportedJoins, setSupportedPredicates, setup, toJson, toJson +getAvailableProcesses, getId, getImplementingInterface, getName, getOntologyType, getParameters, getSupportedJoins, getSupportedPredicates, setAvailableProcesses, setId, setImplementingInterface, setName, setOntologyType, setParameters, setSupportedJoins, setSupportedPredicates, setup, toJson, toJson diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2OntologyRelationship.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2OntologyRelationship.html index c301bf3..91383b5 100644 --- a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2OntologyRelationship.html +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2OntologyRelationship.html @@ -2,9 +2,9 @@ - + Uses of Class edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2.I2B2OntologyRelationship - + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2Resource.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2Resource.html index 769226b..9569a19 100644 --- a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2Resource.html +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2Resource.html @@ -2,9 +2,9 @@ - + Uses of Class edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2.I2B2Resource - + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2XMLResourceImplementation.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2XMLResourceImplementation.html index afa835c..7d24278 100644 --- a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2XMLResourceImplementation.html +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/class-use/I2B2XMLResourceImplementation.html @@ -2,9 +2,9 @@ - + Uses of Class edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2.I2B2XMLResourceImplementation - + @@ -86,6 +86,10 @@

edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2transmart   + +edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2transmartvariant +  + @@ -112,6 +116,27 @@

Uses of + + +

Uses of I2B2XMLResourceImplementation in edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2transmartvariant

+ + + + + + + + + + + + +
Subclasses of I2B2XMLResourceImplementation in edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2transmartvariant 
Modifier and TypeClass and Description
class I2B2TranSMARTVariantResourceImplementation +
An implementation of a resource that communicates with the tranSMART + instance.
+
+ diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-frame.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-frame.html index 15cad1d..5604538 100644 --- a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-frame.html +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-frame.html @@ -2,9 +2,9 @@ - + edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2 - + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-summary.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-summary.html index ace2bfc..fa7b82e 100644 --- a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-summary.html +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-summary.html @@ -2,9 +2,9 @@ - + edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2 - + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-tree.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-tree.html index 0ac3931..2e79467 100644 --- a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-tree.html +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-tree.html @@ -2,9 +2,9 @@ - + edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2 Class Hierarchy - + diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-use.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-use.html index 8a216cb..7af3ce7 100644 --- a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-use.html +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2/package-use.html @@ -2,9 +2,9 @@ - + Uses of Package edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2 - + @@ -90,6 +90,10 @@

edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2transmart   + +edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2transmartvariant +  + @@ -128,6 +132,24 @@

+
  • + + + + + + + + + + + + +
    Classes in edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2 used by edu.harvard.hms.dbmi.bd2k.irct.ri.i2b2transmartvariant 
    Class and Description
    I2B2XMLResourceImplementation +
    An implementation of a resource that communicates with the i2b2 servers via + XML
    +
    +
    • diff --git a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmart/I2B2TranSMARTResourceImplementation.html b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmart/I2B2TranSMARTResourceImplementation.html index e5cf5be..d4672f4 100644 --- a/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmart/I2B2TranSMARTResourceImplementation.html +++ b/javadoc/edu/harvard/hms/dbmi/bd2k/irct/ri/i2b2transmart/I2B2TranSMARTResourceImplementation.html @@ -2,9 +2,9 @@ - + I2B2TranSMARTResourceImplementation - + @@ -18,7 +18,7 @@ catch(err) { } //--> -var methods = {"i0":10,"i1":10,"i2":10,"i3":10,"i4":10}; +var methods = {"i0":10,"i1":10,"i2":10,"i3":10,"i4":10,"i5":10}; var tabs = {65535:["t0","All Methods"],2:["t2","Instance Methods"],8:["t4","Concrete Methods"]}; var altColor = "altColor"; var rowColor = "rowColor"; @@ -158,23 +158,27 @@

    Method Summary

    Method and Description +java.lang.Boolean +editableReturnEntity()  + + java.util.List<edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path> getPathRelationship(edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path path, edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyRelationship relationship)  - + edu.harvard.hms.dbmi.bd2k.irct.model.result.ResultSet -getResults(java.lang.Long queryId)  +getResults(edu.harvard.hms.dbmi.bd2k.irct.model.action.ActionState as)  - + java.lang.String getType()  - -java.lang.Long + +edu.harvard.hms.dbmi.bd2k.irct.model.action.ActionState runQuery(edu.harvard.hms.dbmi.bd2k.irct.model.query.Query query)  - + void setup(java.util.Map<java.lang.String,java.lang.String> parameters)  @@ -262,50 +266,65 @@

    getType

    getPathRelationship

    public java.util.List<edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path> getPathRelationship(edu.harvard.hms.dbmi.bd2k.irct.model.ontology.Path path,
                                                                                               edu.harvard.hms.dbmi.bd2k.irct.model.ontology.OntologyRelationship relationship)
-                                                                                       throws ResourceInterfaceException
    + throws edu.harvard.hms.dbmi.bd2k.irct.exception.ResourceInterfaceException
    Specified by:
    getPathRelationship in interface edu.harvard.hms.dbmi.bd2k.irct.model.resource.PathResourceImplementationInterface
    Overrides:
    getPathRelationship in class I2B2XMLResourceImplementation
    Throws:
    -
    ResourceInterfaceException
    +
    edu.harvard.hms.dbmi.bd2k.irct.exception.ResourceInterfaceException
    - + -