From 44e6337d85de7596b653407e36a36915ce1340d3 Mon Sep 17 00:00:00 2001
From: Ryan Amari <ramari16@gmail.com>
Date: Wed, 9 Oct 2024 14:05:13 -0400
Subject: [PATCH] Cleanup

---
 .../hms/dbmi/avillach/hpds/data/genotype/VariantStore.java   | 5 -----
 1 file changed, 5 deletions(-)

diff --git a/data/src/main/java/edu/harvard/hms/dbmi/avillach/hpds/data/genotype/VariantStore.java b/data/src/main/java/edu/harvard/hms/dbmi/avillach/hpds/data/genotype/VariantStore.java
index f73b476f..ec917bbd 100644
--- a/data/src/main/java/edu/harvard/hms/dbmi/avillach/hpds/data/genotype/VariantStore.java
+++ b/data/src/main/java/edu/harvard/hms/dbmi/avillach/hpds/data/genotype/VariantStore.java
@@ -153,11 +153,6 @@ public List<VariableVariantMasks> getMasksForDbSnpSpec(String variant) {
 		int chrOffset = Integer.parseInt(segments[1]) / BUCKET_SIZE;
 		String contig = segments[0];
 
-//		if (Level.DEBUG.equals(log.getEffectiveLevel())) {
-//			log.debug("Getting masks for variant " + variant + "  Same bucket test: " + (bucketCache.lastValue != null
-//					&& contig.contentEquals(bucketCache.lastContig) && chrOffset == bucketCache.lastChunkOffset));
-//		}
-
 		// todo: don't bother doing a lookup if this node does not have the chromosome specified
 		FileBackedJsonIndexStorage<Integer, ConcurrentHashMap<String, VariableVariantMasks>> indexedStorage = variantMaskStorage.get(contig);
 		if (indexedStorage == null) {