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GOAL: 2D annotation handling #40

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droumis opened this issue Jun 7, 2023 · 1 comment · Fixed by #104
Closed

GOAL: 2D annotation handling #40

droumis opened this issue Jun 7, 2023 · 1 comment · Fixed by #104
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ca-imaging calcium imaging video-viewer

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@droumis
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droumis commented Jun 7, 2023 •
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Summary and Links

  • 2D-annotation (lead: @hoxbro)
    • Try to use holonote for roi management
    • Potential extension: 2D annotated (region of interest) spatial aggregation to linked timeseries
    • Potential extension: UI integration into the Bokeh toolbar.

Relevant Workflows

  • video-viewer

See more general Annotation handling GOAL
@droumis droumis converted this from a draft issue Jun 7, 2023
@droumis droumis moved this to Todo in CZI R5 neuro Jun 7, 2023
@droumis droumis added video-viewer ca-imaging calcium imaging labels Jun 7, 2023
@droumis droumis moved this from Todo to GOAL in CZI R5 neuro Jan 4, 2024
@droumis droumis removed the status in CZI R5 neuro Jan 4, 2024
@droumis
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droumis commented Aug 6, 2024

#104

@droumis droumis closed this as completed Aug 6, 2024
@droumis droumis mentioned this issue Aug 6, 2024
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ca-imaging calcium imaging video-viewer
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CZI R5 neuro
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Deep image stack annotation workflow docs holoviz-topics/neuro
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@droumis